View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8061_low_7 (Length: 659)

Name: NF8061_low_7
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8061_low_7
NF8061_low_7
[»] chr6 (13 HSPs)
chr6 (8-355)||(7103842-7104189)
chr6 (8-355)||(8790441-8790788)
chr6 (442-643)||(7104276-7104477)
chr6 (442-643)||(8790153-8790354)
chr6 (499-638)||(7497910-7498049)
chr6 (499-638)||(30384307-30384446)
chr6 (499-638)||(14261686-14261825)
chr6 (499-638)||(31896457-31896596)
chr6 (499-629)||(31068243-31068373)
chr6 (499-638)||(34774205-34774344)
chr6 (499-585)||(4199756-4199842)
chr6 (581-635)||(7104458-7104512)
chr6 (581-635)||(8790118-8790172)
[»] chr4 (21 HSPs)
chr4 (8-355)||(38233919-38234266)
chr4 (442-643)||(38234353-38234556)
chr4 (499-638)||(49500775-49500914)
chr4 (499-638)||(51321676-51321815)
chr4 (499-638)||(5801525-5801664)
chr4 (511-638)||(41725938-41726065)
chr4 (499-638)||(54852719-54852858)
chr4 (499-638)||(23988017-23988156)
chr4 (499-638)||(37916611-37916750)
chr4 (499-638)||(54341967-54342106)
chr4 (499-638)||(32322890-32323028)
chr4 (499-638)||(37827671-37827810)
chr4 (499-638)||(5442214-5442352)
chr4 (499-638)||(50019012-50019150)
chr4 (499-638)||(27768885-27769023)
chr4 (499-612)||(32683296-32683409)
chr4 (499-598)||(29649295-29649394)
chr4 (511-598)||(30966350-30966437)
chr4 (499-598)||(49834122-49834221)
chr4 (499-576)||(28484720-28484797)
chr4 (581-635)||(38234537-38234591)
[»] chr1 (33 HSPs)
chr1 (8-355)||(48198263-48198610)
chr1 (8-331)||(48206919-48207242)
chr1 (5-231)||(20112112-20112339)
chr1 (442-643)||(48207280-48207483)
chr1 (442-643)||(48198697-48198900)
chr1 (8-173)||(19004013-19004178)
chr1 (8-227)||(23326366-23326585)
chr1 (21-220)||(17566139-17566338)
chr1 (499-629)||(15834282-15834412)
chr1 (499-629)||(25830495-25830625)
chr1 (511-627)||(46328798-46328914)
chr1 (499-638)||(8140098-8140237)
chr1 (499-638)||(28386694-28386833)
chr1 (499-638)||(49231804-49231943)
chr1 (499-638)||(51702414-51702553)
chr1 (499-629)||(29219932-29220062)
chr1 (499-628)||(20111827-20111960)
chr1 (499-638)||(25612912-25613051)
chr1 (499-638)||(29395673-29395812)
chr1 (499-638)||(6313396-6313535)
chr1 (499-638)||(9321755-9321894)
chr1 (511-628)||(45273400-45273517)
chr1 (499-638)||(38535391-38535532)
chr1 (499-638)||(38557609-38557750)
chr1 (21-172)||(17566545-17566690)
chr1 (499-598)||(18799272-18799370)
chr1 (499-598)||(48176718-48176819)
chr1 (581-635)||(48198881-48198935)
chr1 (499-576)||(5494427-5494503)
chr1 (581-635)||(48207464-48207518)
chr1 (499-585)||(23326736-23326820)
chr1 (564-605)||(51826116-51826157)
chr1 (592-628)||(5494403-5494439)
[»] chr7 (32 HSPs)
chr7 (8-355)||(12894615-12894962)
chr7 (442-641)||(26182856-26183055)
chr7 (442-643)||(46035591-46035794)
chr7 (189-355)||(46035881-46036052)
chr7 (499-638)||(3023745-3023884)
chr7 (499-638)||(18839114-18839253)
chr7 (499-627)||(29893776-29893904)
chr7 (499-629)||(44256020-44256150)
chr7 (499-628)||(33383461-33383590)
chr7 (499-638)||(30823449-30823588)
chr7 (499-638)||(47067520-47067659)
chr7 (499-638)||(7993976-7994115)
chr7 (499-638)||(12741193-12741332)
chr7 (499-638)||(28343130-28343269)
chr7 (511-638)||(40459968-40460095)
chr7 (442-565)||(12894404-12894528)
chr7 (499-638)||(32884572-32884712)
chr7 (499-638)||(510466-510605)
chr7 (499-638)||(23102111-23102250)
chr7 (499-638)||(33891482-33891621)
chr7 (499-638)||(29614041-29614180)
chr7 (499-605)||(39028906-39029012)
chr7 (499-628)||(37971635-37971763)
chr7 (499-627)||(29586332-29586460)
chr7 (499-598)||(44121225-44121324)
chr7 (511-628)||(8676165-8676282)
chr7 (551-638)||(9881535-9881622)
chr7 (499-598)||(21068186-21068285)
chr7 (560-638)||(28034333-28034411)
chr7 (581-635)||(46035556-46035610)
chr7 (499-595)||(39784926-39785022)
chr7 (511-598)||(48136527-48136616)
[»] chr3 (29 HSPs)
chr3 (499-638)||(10728262-10728401)
chr3 (499-638)||(26108127-26108266)
chr3 (499-628)||(51737013-51737142)
chr3 (499-638)||(20833717-20833856)
chr3 (499-638)||(31645499-31645638)
chr3 (499-638)||(34483340-34483479)
chr3 (499-638)||(18750453-18750592)
chr3 (499-638)||(37455658-37455797)
chr3 (499-638)||(52617222-52617361)
chr3 (449-598)||(44707727-44707882)
chr3 (511-627)||(44905103-44905219)
chr3 (511-638)||(17947050-17947177)
chr3 (499-638)||(39841691-39841830)
chr3 (520-638)||(27239466-27239584)
chr3 (499-627)||(38683437-38683566)
chr3 (499-628)||(54629670-54629799)
chr3 (499-629)||(36673404-36673534)
chr3 (499-638)||(10661007-10661146)
chr3 (499-598)||(23752669-23752768)
chr3 (536-638)||(50902596-50902698)
chr3 (499-598)||(40897941-40898040)
chr3 (499-576)||(52811170-52811247)
chr3 (499-598)||(45254720-45254819)
chr3 (499-598)||(48379970-48380069)
chr3 (499-612)||(11432366-11432479)
chr3 (517-598)||(50761389-50761470)
chr3 (499-628)||(39038900-39039025)
chr3 (563-638)||(52811266-52811341)
chr3 (503-585)||(52023176-52023258)
[»] chr2 (22 HSPs)
chr2 (499-638)||(25288975-25289114)
chr2 (499-638)||(13832804-13832943)
chr2 (512-638)||(214716-214842)
chr2 (499-638)||(3575664-3575803)
chr2 (499-638)||(28739267-28739406)
chr2 (499-638)||(28845398-28845537)
chr2 (499-638)||(43079300-43079439)
chr2 (499-638)||(10658251-10658390)
chr2 (499-638)||(33136414-33136553)
chr2 (499-629)||(379749-379879)
chr2 (499-638)||(18178092-18178231)
chr2 (499-638)||(26789605-26789744)
chr2 (499-638)||(3464423-3464562)
chr2 (499-638)||(7027724-7027863)
chr2 (500-598)||(6223860-6223957)
chr2 (571-627)||(2373859-2373915)
chr2 (229-265)||(41869774-41869810)
chr2 (566-612)||(17326732-17326778)
chr2 (564-605)||(18175670-18175711)
chr2 (564-605)||(27979763-27979804)
chr2 (564-605)||(28066293-28066334)
chr2 (263-296)||(41870034-41870067)
[»] chr8 (21 HSPs)
chr8 (499-629)||(37857698-37857828)
chr8 (511-638)||(32498723-32498850)
chr8 (499-638)||(7467142-7467281)
chr8 (499-638)||(18305212-18305351)
chr8 (499-638)||(19717116-19717255)
chr8 (511-629)||(9287743-9287861)
chr8 (499-638)||(43165918-43166057)
chr8 (499-626)||(43307760-43307887)
chr8 (499-638)||(44725032-44725171)
chr8 (499-629)||(26856926-26857056)
chr8 (499-638)||(18957969-18958108)
chr8 (511-638)||(42304862-42304989)
chr8 (533-638)||(20831215-20831320)
chr8 (511-598)||(39466797-39466884)
chr8 (499-586)||(40012462-40012549)
chr8 (511-609)||(16365111-16365209)
chr8 (499-598)||(14781413-14781512)
chr8 (564-638)||(7467292-7467366)
chr8 (499-638)||(31626128-31626259)
chr8 (499-576)||(10294660-10294737)
chr8 (592-638)||(10294626-10294672)
[»] chr5 (17 HSPs)
chr5 (499-638)||(1151535-1151674)
chr5 (499-638)||(13926752-13926891)
chr5 (499-638)||(40012953-40013092)
chr5 (499-628)||(5949938-5950067)
chr5 (499-638)||(4549501-4549640)
chr5 (512-628)||(7947279-7947395)
chr5 (499-598)||(39853182-39853281)
chr5 (499-605)||(4239739-4239845)
chr5 (511-598)||(37014699-37014785)
chr5 (19-227)||(18929414-18929616)
chr5 (499-595)||(1459464-1459560)
chr5 (499-598)||(13999380-13999479)
chr5 (229-263)||(39709458-39709492)
chr5 (315-355)||(39709795-39709835)
chr5 (132-203)||(6055405-6055476)
chr5 (263-306)||(39709718-39709761)
chr5 (442-489)||(39709917-39709964)
[»] scaffold0042 (1 HSPs)
scaffold0042 (499-638)||(57305-57444)
[»] scaffold0054 (1 HSPs)
scaffold0054 (499-628)||(36550-36679)
[»] scaffold0940 (1 HSPs)
scaffold0940 (499-638)||(3709-3848)
[»] scaffold1521 (1 HSPs)
scaffold1521 (499-638)||(1428-1567)
[»] scaffold0383 (1 HSPs)
scaffold0383 (499-638)||(16283-16422)
[»] scaffold0152 (2 HSPs)
scaffold0152 (499-638)||(20510-20649)
scaffold0152 (499-638)||(29152-29291)
[»] scaffold0839 (1 HSPs)
scaffold0839 (503-638)||(3249-3384)
[»] scaffold0110 (1 HSPs)
scaffold0110 (499-585)||(38931-39017)
[»] scaffold0472 (1 HSPs)
scaffold0472 (564-605)||(1117-1158)


Alignment Details
Target: chr6 (Bit Score: 336; Significance: 0; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 8 - 355
Target Start/End: Original strand, 7103842 - 7104189
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7103842 agcagaacttgtgttggcatgtgcagcacttcataactttcttcgcaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 7103941  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7103942 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 7104041  T
Q  208 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7104042 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 7104141  T
Q  308 atatctaaagataatcttgttttaagaaacttcattaccagcgagaca 355  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  7104142 atatctaaagataatcttgttttaagaaacttcattaccagcaagaca 7104189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 8 - 355
Target Start/End: Complemental strand, 8790788 - 8790441
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8790788 agcagaacttgtgttggcatgtgcagcacttcataactttcttcgcaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 8790689  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8790688 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 8790589  T
Q  208 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8790588 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 8790489  T
Q  308 atatctaaagataatcttgttttaagaaacttcattaccagcgagaca 355  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  8790488 atatctaaagataatcttgttttaagaaacttcattaccagcaagaca 8790441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 442 - 643
Target Start/End: Original strand, 7104276 - 7104477
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnnttatttgtttactatttctatcattcacggttgtaagtttgtt 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||||||    
T  7104276 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggaaaaaaaattatttgtttactatttctatcatttacggttgtaagtttgtt 7104375  T
Q  542 ctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcctt 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7104376 ctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcctt 7104475  T
Q  642 tg 643  Q
    ||    
T  7104476 tg 7104477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 442 - 643
Target Start/End: Complemental strand, 8790354 - 8790153
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnnttatttgtttactatttctatcattcacggttgtaagtttgtt 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||| |||||||||||||||||    
T  8790354 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggaaaaaaaattatttgtttactatttctatcatttacggttgtaagtttgtt 8790255  T
Q  542 ctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcctt 641  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8790254 ctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcctt 8790155  T
Q  642 tg 643  Q
    ||    
T  8790154 tg 8790153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 7497910 - 7498049
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  7497910 ttatttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 7498009  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||| |||||| ||||||||||||||||  |||||||    
T  7498010 tgaaatctttaaaagtcagtgtgataaatcctttaaaatc 7498049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 30384446 - 30384307
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  30384446 ttatttgttcattatttttatcatccacgcttgtaagtttgttctttttcctctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 30384347  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  30384346 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 30384307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 14261825 - 14261686
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||  |||||||||||||||||| || ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  14261825 ttatttgttcattatttttatcatccacacttgtaagtttgttcttttccccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 14261726  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||| |||||| ||||||||||||||||  |||||||    
T  14261725 tgaaatcattaaaagtcagtgtgataaatcctttaaaatc 14261686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 31896457 - 31896596
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  31896457 ttatttgttcattatttttatcattcacgtttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 31896556  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  31896557 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 31896596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 31068243 - 31068373
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  31068243 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 31068342  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||||||||||| || |||||||||||||    
T  31068343 tgaaatccttaaaagtctgtgtgataaatcc 31068373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 34774205 - 34774344
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||| |  |||| || |||||||  |||||||| |||||||| ||| ||||||||    
T  34774205 ttatttgttcattatttttatcattcacgcttgtaagtttgctcttttttccttaaaatttattgaatattttgaaattttaaaatcacatgaaatcctt 34774304  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  34774305 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 34774344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 585
Target Start/End: Complemental strand, 4199842 - 4199756
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatc 585  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| |||||||||  |||| || |||||||| |||||||| ||||||||    
T  4199842 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccttaaaatttattgaatcttttgaaattttaaaatc 4199756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 635
Target Start/End: Original strand, 7104458 - 7104512
Alignment:
Q  581 aaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaa 635  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  7104458 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 7104512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 635
Target Start/End: Complemental strand, 8790172 - 8790118
Alignment:
Q  581 aaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaa 635  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  8790172 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 8790118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 336; Significance: 0; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 8 - 355
Target Start/End: Original strand, 38233919 - 38234266
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38233919 agcagaacttgtgttggcatgtgcagcacttcataactttcttcgcaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 38234018  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38234019 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 38234118  T
Q  208 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38234119 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 38234218  T
Q  308 atatctaaagataatcttgttttaagaaacttcattaccagcgagaca 355  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  38234219 atatctaaagataatcttgttttaagaaacttcattaccagcaagaca 38234266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 442 - 643
Target Start/End: Original strand, 38234353 - 38234556
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnn--ttatttgtttactatttctatcattcacggttgtaagtttg 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  38234353 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggaaaaaaaaaattatttgtttactatttctatcattcacggttgtaagtttg 38234452  T
Q  540 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcc 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38234453 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcc 38234552  T
Q  640 tttg 643  Q
    ||||    
T  38234553 tttg 38234556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 49500914 - 49500775
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  49500914 ttatttgttcattatttttatcattcacgcttgtaagtttattctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 49500815  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  49500814 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 49500775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 51321676 - 51321815
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  51321676 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttt 51321775  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  51321776 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 51321815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 5801525 - 5801664
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  5801525 ttatttgttcattatttttatcattcacgcttgtaagtttgttatttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 5801624  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||| ||||||||||||  |||||||    
T  5801625 tgaaatccttaaaagtcaatgtgataaatcctttaaaatc 5801664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 511 - 638
Target Start/End: Original strand, 41725938 - 41726065
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  41725938 tatttatatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttaaaattttaaaatcacataaaatcctttgaaatccttaa 41726037  T
Q  611 aattcagtgtgataaatcccataaaatc 638  Q
    || ||||||||||||||||  |||||||    
T  41726038 aagtcagtgtgataaatcctttaaaatc 41726065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 54852858 - 54852719
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| |||||||||  |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  54852858 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccttaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 54852759  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  54852758 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 54852719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 23988017 - 23988156
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||| |||    
T  23988017 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaattctt 23988116  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||| ||||||  |||||||||||||||  |||||||    
T  23988117 tgaaatctttaaaagccagtgtgataaatcctttaaaatc 23988156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 37916611 - 37916750
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||  |||||||||||||||||||||  |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37916611 ttatttgttcattatttttatcattcacacttgtaagtttgttctttttcccttaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 37916710  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||| ||||||||||||  |||||||    
T  37916711 tgaaatccttaaaagtcattgtgataaatcctttaaaatc 37916750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 54341967 - 54342106
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||| ||| ||||||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||||    
T  54341967 ttatttgttcattatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcatcgaatcttttgaaattttaaaatcacataaaatcctt 54342066  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  54342067 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 54342106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 32322890 - 32323028
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||  |||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  32322890 ttatttgttcattatttttatcagacacgcttgtaagtttgttctttttcc-ctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctt 32322988  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||| ||||||||||||  |||||||    
T  32322989 tgaaatccttaaaagtcaatgtgataaatcctttaaaatc 32323028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 37827810 - 37827671
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  37827810 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 37827711  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  37827710 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 37827671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 5442214 - 5442352
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  5442214 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcc-ctaaaatttattgaatcttttgaaattttaaaatcccatgaaatcctt 5442312  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  5442313 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 5442352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 50019012 - 50019150
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||| | ||||||||||||| ||||||| ||||| |||||||||||||||||||| ||||||||  |||||||||||    
T  50019012 ttatttgttcattatttttatcattcatgcttgtaagtttgttttttttcc-ctaaaattcattgaatcctttgaaattttaaaatcatataaaatcctt 50019110  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || || ||||||||||  |||||||    
T  50019111 tgaaatccttaaaagtctgtatgataaatcctttaaaatc 50019150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 27768885 - 27769023
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||  ||||||||||| |||||| || ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  27768885 ttatttgttcattatttttatcattcacacttgtaagtttgctcttttccc-ctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 27768983  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  27768984 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 27769023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 32683409 - 32683296
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| |||||||||| ||||||||   ||||| |||||  ||||||||||||| |||||||| ||||||||| ||    
T  32683409 ttatttgttcattatttttatcattcacgcttgtaagtttattctttttgttctaaaattcatccaatcctttgaaattttaaaatcacataaaatcatt 32683310  T
Q  599 tgaaatccttaaaa 612  Q
    ||||||||||||||    
T  32683309 tgaaatccttaaaa 32683296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 29649394 - 29649295
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| || ||| |||||||||||||  ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  29649394 ttatttgttcattatttttatcattcacgcttctaaatttgttctttttcacctaaaattcattgaatcatttgaaattttaaaatcacataaaatcctt 29649295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 511 - 598
Target Start/End: Complemental strand, 30966437 - 30966350
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||| ||||||||||| || |||||||||||||||||| ||||| || |||||||| |||||||| |||||||| ||||||||||||    
T  30966437 tatttttatcattcacgcttctaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacataaaatcctt 30966350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 49834221 - 49834122
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||| ||||||| ||||||||||||| ||||||| ||||| |||||||||||||||||||  |||||||| | ||||||||||    
T  49834221 ttatttgttcattatttttattattcacgcttgtaagtttgttatttttcccctaaaattcattgaatcctttgaaaatttaaaatcacttaaaatcctt 49834122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 576
Target Start/End: Original strand, 28484720 - 28484797
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaat 576  Q
    ||||||||| | ||||| ||||||||||   ||||| |||||||||||||| ||||| ||||||||||||||||||||    
T  28484720 ttatttgttcattatttttatcattcacacatgtaattttgttctttttcctctaaaattcattgaatcctttgaaat 28484797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 635
Target Start/End: Original strand, 38234537 - 38234591
Alignment:
Q  581 aaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaa 635  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  38234537 aaatcccataaaatcctttgaaatccttaaaagtcagtttgataaatcccttaaa 38234591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 336; Significance: 0; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 8 - 355
Target Start/End: Original strand, 48198263 - 48198610
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48198263 agcagaacttgtgttggcatgtgcagcacttcataactttcttcgcaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 48198362  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48198363 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 48198462  T
Q  208 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48198463 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 48198562  T
Q  308 atatctaaagataatcttgttttaagaaacttcattaccagcgagaca 355  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  48198563 atatctaaagataatcttgttttaagaaacttcattaccagcaagaca 48198610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 8 - 331
Target Start/End: Original strand, 48206919 - 48207242
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48206919 agcagaacttgtgttggcatgtgcagcacttcataactttcttcgcaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 48207018  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48207019 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 48207118  T
Q  208 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48207119 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 48207218  T
Q  308 atatctaaagataatcttgtttta 331  Q
    |||||||||||||| |||||||||    
T  48207219 atatctaaagataaccttgtttta 48207242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 5 - 231
Target Start/End: Complemental strand, 20112339 - 20112112
Alignment:
Q  5 acgagcagaacctgtgttggcatg-tgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttc 103  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20112339 acgagcataacttgtgttggcatgatgcagcacttcataactttcttcgcaaagaatgtcgttccgattaatttccaattgaaccttctaacgagtcttc 20112240  T
Q  104 atcttcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggact 203  Q
    || ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  20112239 atattcatattcaatgttacctattcatgaagacaataattatgaactcaatgttcaaacacaagagcgagaacgagaagatgctaatctatggaggact 20112140  T
Q  204 aatttaggtttagatatgtggagagatg 231  Q
    ||| |||||| ||||||| |||||||||    
T  20112139 aatataggttcagatatgcggagagatg 20112112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 442 - 643
Target Start/End: Original strand, 48207280 - 48207483
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnn--ttatttgtttactatttctatcattcacggttgtaagtttg 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  48207280 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggaaaaaaaaaattatttgtttactatttctatcattcacggttgtaagtttg 48207379  T
Q  540 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcc 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48207380 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcc 48207479  T
Q  640 tttg 643  Q
    ||||    
T  48207480 tttg 48207483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 6e-88
Query Start/End: Original strand, 442 - 643
Target Start/End: Original strand, 48198697 - 48198900
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnn--ttatttgtttactatttctatcattcacggttgtaagtttg 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          || ||||||||||||||||||||||||||||||||||||||    
T  48198697 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggaaaaaaaaatttttttgtttactatttctatcattcacggttgtaagtttg 48198796  T
Q  540 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcc 639  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48198797 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcc 48198896  T
Q  640 tttg 643  Q
    ||||    
T  48198897 tttg 48198900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 8 - 173
Target Start/End: Complemental strand, 19004178 - 19004013
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19004178 agcagaacttgtgttggcatgtgcagcacttcataactttcttcgcaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 19004079  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaa 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19004078 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaa 19004013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 8 - 227
Target Start/End: Original strand, 23326366 - 23326585
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||| |||||||||| |||||| | ||||||||| ||||| ||||| |||||| ||||||| |||||||||||||||||    
T  23326366 agcagaacttgtgttggcatgtgcaacacttcataaatttctttgcaaagaatgttgttccaatgaaattccaaatgaacctactaacgagtcttcatct 23326465  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 207  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||  |     
T  23326466 tcatcttcaatgttacctattcactaagacaataattatgaactcaatattcaaacacaagagcaaaaacgagaagatgctaatttatggaggactggta 23326565  T
Q  208 taggtttagatatgtggaga 227  Q
    |||||| ||| |||||||||    
T  23326566 taggttcagacatgtggaga 23326585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 21 - 220
Target Start/End: Original strand, 17566139 - 17566338
Alignment:
Q  21 ttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatcttcatcttcaatgt 120  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||| ||  |||||||||||||||||||| |||| | ||| ||||||||||||||||  |    
T  17566139 ttggcatgtgcagcacttcataacattcttcgcaaataatgtcgctcgaatgaatttccaattgaacctactaatgggtcctcatcttcatcttcaactt 17566238  T
Q  121 tacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatttaggtttagatat 220  Q
    |  | ||||| |||| ||||||| |||||  |||||||||||||||||||||   |||||||||||||||| ||||| | |||| | |||||||||||||    
T  17566239 tgtcaattcacgaagtcaataattatgaagccaatgttcaaacacaagagcagttacgagaagatgctaatttatggtgaactagtataggtttagatat 17566338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 499 - 629
Target Start/End: Complemental strand, 15834412 - 15834282
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||  ||||||||||||    
T  15834412 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatgacataaaatcctt 15834313  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||||||||||| || |||||||||||||    
T  15834312 tgaaatccttaaaagtctgtgtgataaatcc 15834282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 499 - 629
Target Start/End: Complemental strand, 25830625 - 25830495
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  25830625 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttaccctaaaattcattgaatccttttaaattttaaaatcacataaaatcctt 25830526  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||||||||||| ||||||||||||||||    
T  25830525 tgaaatccttaaaagtcagtgtgataaatcc 25830495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 511 - 627
Target Start/End: Original strand, 46328798 - 46328914
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  46328798 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttaaaatccttaa 46328897  T
Q  611 aattcagtgtgataaat 627  Q
    || ||||||||||||||    
T  46328898 aagtcagtgtgataaat 46328914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 8140237 - 8140098
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| || |||||||| |||||||||||||||||||||  |||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  8140237 ttatttgttcattatttttaacattcacgcttgtaagtttgttctttttcccttaaaattcattgaatcctttgaaattttaaaatcacataaaatcatt 8140138  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  8140137 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 8140098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 28386833 - 28386694
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||||||| ||    
T  28386833 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcttt 28386734  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  28386733 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 28386694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 49231804 - 49231943
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||| ||||||||| ||| ||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  49231804 ttatttgttcattatttttatcattcacgcttgaaagtttgttgtttctcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 49231903  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  49231904 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 49231943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 51702414 - 51702553
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||||||| |||    
T  51702414 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaattctt 51702513  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  51702514 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 51702553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 29219932 - 29220062
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||| | ||||||||||||||||||||   |||| |||||||||||||||||||| |||||||| ||||||||||||    
T  29219932 ttatttgttcattatttttatcattcatgtttgtaagtttgttctttttctcgtaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 29220031  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||||||||||| ||||||||||||||||    
T  29220032 tgaaatccttaaaagtcagtgtgataaatcc 29220062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 499 - 628
Target Start/End: Complemental strand, 20111960 - 20111827
Alignment:
Q  499 ttatttgtttactatttctatcattca----cggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaat 594  Q
    ||||||||||||||||| |||||||||    || ||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| |||||||     
T  20111960 ttatttgtttactatttttatcattcattcacgcttgtaagtttgttctttttcctctaaaattcatagaatcctttgaaatattaaaatcccataaaac 20111861  T
Q  595 cctttgaaatccttaaaattcagtgtgataaatc 628  Q
    |||||||||||||||||| ||| |||||||||||    
T  20111860 cctttgaaatccttaaaagtcaatgtgataaatc 20111827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 25612912 - 25613051
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  25612912 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 25613011  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  25613012 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 25613051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 29395812 - 29395673
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||| ||| ||||||||||||||||||||| ||||| ||||| ||||| |||||||| |||||||| ||||||||||||    
T  29395812 ttatttgttcattatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcatcgaatcttttgaaattttaaaatcacataaaatcctt 29395713  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  29395712 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 29395673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 6313396 - 6313535
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  6313396 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 6313495  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  6313496 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 6313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 9321894 - 9321755
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  9321894 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 9321795  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  9321794 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 9321755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 45273400 - 45273517
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||| || | ||||||||||||||| |||||||| |||||||||||||||||||||| |    
T  45273400 tatttttatcattcacgcttgtaagtttgttcttttttccctaaaatttactgaatcctttgaaattttaaaatcccataaaatcctttgaaatccttga 45273499  T
Q  611 aattcagtgtgataaatc 628  Q
    || |||||||||||||||    
T  45273500 aagtcagtgtgataaatc 45273517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 38535532 - 38535391
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttc--cgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcc 596  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||||   | ||||| ||||||||||| |||||||| |||||||| ||||||||||    
T  38535532 ttatttgttcattatttctatcattcacgcttgtaagtttgttcttttttttccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcc 38535433  T
Q  597 tttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||| ||||| |||||| ||||||| ||||||||  |||||||    
T  38535432 tttaaaatcattaaaagtcagtgttataaatcctttaaaatc 38535391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 38557750 - 38557609
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttc--cgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcc 596  Q
    ||||||||| | ||||||||||||||||| |||||||||||||||||||   | ||||| ||||||||||| |||||||| |||||||| ||||||||||    
T  38557750 ttatttgttcattatttctatcattcacgcttgtaagtttgttcttttttttccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcc 38557651  T
Q  597 tttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||| ||||| |||||| ||||||| ||||||||  |||||||    
T  38557650 tttaaaatcattaaaagtcagtgttataaatcctttaaaatc 38557609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 21 - 172
Target Start/End: Complemental strand, 17566690 - 17566545
Alignment:
Q  21 ttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatcttcatcttcaatgt 120  Q
    |||||||||||| ||||||||||||||||||| ||||||| |||||  ||||||||| || |||||||| || |||||||||||||      ||||||||    
T  17566690 ttggcatgtgcaacacttcataactttcttcgcaaagaatatcgttatgatgaattttcagttgaacctactgacgagtcttcatc------ttcaatgt 17566597  T
Q  121 tacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagca 172  Q
    |||| | |||  ||||||||||| |||||| ||||||| |||||||||||||    
T  17566596 taccgaatcacaaagacaataattatgaacccaatgtttaaacacaagagca 17566545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 598
Target Start/End: Original strand, 18799272 - 18799370
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  18799272 ttatttgttcattatttttatcattcacgcttgta-gtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 18799370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 48176819 - 48176718
Alignment:
Q  499 ttatttgtttactatttctatcat--tcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcc 596  Q
    ||||||||| | ||||| ||||||  ||||| ||||||||||||||||||| | | ||| |||||||||||||||||||| ||| |||| ||||||||||    
T  48176819 ttatttgttcattatttttatcatattcacgcttgtaagtttgttcttttttcccaaaaattcattgaatcctttgaaattttagaatcacataaaatcc 48176720  T
Q  597 tt 598  Q
    ||    
T  48176719 tt 48176718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 581 - 635
Target Start/End: Original strand, 48198881 - 48198935
Alignment:
Q  581 aaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaa 635  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  48198881 aaatcccataaaatcctttgaaatccttaaaagtcagtgtgataaatcccttaaa 48198935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 576
Target Start/End: Complemental strand, 5494503 - 5494427
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaat 576  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||| ||||| | ||||| ||||||||||||||||||||    
T  5494503 ttatttgttcattatttttatcattcacgcttgtaagtttgtttttttttc-ctaaaattcattgaatcctttgaaat 5494427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 635
Target Start/End: Original strand, 48207464 - 48207518
Alignment:
Q  581 aaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaa 635  Q
    ||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||    
T  48207464 aaatcccataaaatcctttgaaatccttaaaagtcagtatgataaatcccttaaa 48207518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 499 - 585
Target Start/End: Original strand, 23326736 - 23326820
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatc 585  Q
    ||||||||||| ||||| |||||||||| | |||||||||||  |||| || ||||| |||||| |||||||| ||||  |||||||    
T  23326736 ttatttgtttattatttttatcattcactgatgtaagtttgt--ttttccctctaaaattcattaaatcctttaaaattctaaaatc 23326820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 605
Target Start/End: Complemental strand, 51826157 - 51826116
Alignment:
Q  564 aatcctttgaaatattaaaatctcataaaatcctttgaaatc 605  Q
    |||||||| |||| ||||||||||||| ||||||||||||||    
T  51826157 aatcctttcaaatcttaaaatctcatacaatcctttgaaatc 51826116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 628
Target Start/End: Complemental strand, 5494439 - 5494403
Alignment:
Q  592 aatcctttgaaatccttaaaattcagtgtgataaatc 628  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  5494439 aatcctttgaaatccttgaaagtcagtgtgataaatc 5494403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 328; Significance: 0; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 8 - 355
Target Start/End: Complemental strand, 12894962 - 12894615
Alignment:
Q  8 agcagaacctgtgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 107  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12894962 agcagaacttgtgttggcatgtgcagcacttcataactttcttcgcaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatct 12894863  T
Q  108 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  12894862 tcatcttcaatgttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaata 12894763  T
Q  208 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12894762 taggtttagatatgtggagagatgtacaaggaataccgtgatactactctaaacggtgattcagtgaatcacatttcccttttcatattgggagatgcta 12894663  T
Q  308 atatctaaagataatcttgttttaagaaacttcattaccagcgagaca 355  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  12894662 atatctgaagataatcttgttttaagaaacttcattaccagcaagaca 12894615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 442 - 641
Target Start/End: Original strand, 26182856 - 26183055
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnnttatttgtttactatttctatcattcacggttgtaagtttgtt 541  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||        ||||||||||||||||||||||||||||||||| |||||||||    
T  26182856 atgtaccggtacaagctcgattttgaatttagagatcactttgtttcggaaaaaaaattatttgtttactatttctatcattcacggttgaaagtttgtt 26182955  T
Q  542 ctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcctt 641  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26182956 ctttttccgctaaagttcattgaatcctttgaaatattaaaatcccataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcctt 26183055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 442 - 643
Target Start/End: Complemental strand, 46035794 - 46035591
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnn--ttatttgtttactatttctatcattcacggttgtaagtttg 539  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||    
T  46035794 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggaaaaaaataattatttgtttactatttctatcattcacggttgtaagtttg 46035695  T
Q  540 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatcc 639  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  46035694 ttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaattttttgaaatccttaaaattcagtgtgataaatcccataaaatcc 46035595  T
Q  640 tttg 643  Q
    ||||    
T  46035594 tttg 46035591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 189 - 355
Target Start/End: Complemental strand, 46036052 - 46035881
Alignment:
Q  189 aatatatggaggactaatttaggtttagatatgtggagagatgtacaaggaataccgtgatactactcta-----aacggtgattcagtgaatcacattt 283  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||     |||||||||||||||||||||||||    
T  46036052 aatatatggaggactaatataggtttagatatgtggagagatgtacaagaaataccgtgatactactctactctaaacggtgattcagtgaatcacattt 46035953  T
Q  284 cccttttcatattgggagatgctaatatctaaagataatcttgttttaagaaacttcattaccagcgagaca 355  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46035952 cccttttcatattgggagatgctaatatctaaagataatcttgttttaagaaacttcattaccagcaagaca 46035881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 3023745 - 3023884
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  3023745 ttatttgttcattatttttatcatccacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 3023844  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  3023845 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 3023884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 18839114 - 18839253
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  18839114 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttccactaaaattcattgaatcttttgaaattttaaaatcacataaaatcctt 18839213  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  18839214 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 18839253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 499 - 627
Target Start/End: Original strand, 29893776 - 29893904
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  29893776 ttatttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttt 29893875  T
Q  599 tgaaatccttaaaattcagtgtgataaat 627  Q
    ||||||| |||||| ||||||||||||||    
T  29893876 tgaaatctttaaaagtcagtgtgataaat 29893904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 499 - 629
Target Start/End: Complemental strand, 44256150 - 44256020
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  44256150 ttatttgttcattatttttatcattcacgtttgtaaatttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 44256051  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||| ||||||| ||||||||||||||||    
T  44256050 tgaaattcttaaaagtcagtgtgataaatcc 44256020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 499 - 628
Target Start/End: Original strand, 33383461 - 33383590
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  33383461 ttatttgttcattatttttatcattcacgcttgtaagtttgttcttttccccctaaaattcattgaatcctttgaaattttaaaatctcataaaagcctt 33383560  T
Q  599 tgaaatccttaaaattcagtgtgataaatc 628  Q
    |||||||||| ||| |||||||||||||||    
T  33383561 tgaaatccttgaaagtcagtgtgataaatc 33383590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 30823449 - 30823588
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||| ||||| | ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  30823449 ttatttgttcattatttctattattcatgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttt 30823548  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||| ||||||||||||  |||||||    
T  30823549 tgaaatccttaaaagtcaatgtgataaatcctttaaaatc 30823588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 47067520 - 47067659
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||   |||||||||||    
T  47067520 ttatttgttaattatttttatcattcacgtttgtaattttgttctttttcccctaaaattcattgaatcctttgaaattttaaaattatataaaatcctt 47067619  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  47067620 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 47067659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 7993976 - 7994115
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||||| || |||||||||||||||||||||  |||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  7993976 ttatttgttcattatttttatcattcgcgcttgtaagtttgttctttttcccataaaattcattgaatcatttgaaattttaaaatcacataaaatcctt 7994075  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||| ||||||| ||||||||||||||||  |||||||    
T  7994076 tgaaattcttaaaagtcagtgtgataaatcctttaaaatc 7994115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 12741193 - 12741332
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| || ||||||||||||||| | |||||||  ||||||||||||    
T  12741193 ttatttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaatttattgaatcctttgaatttttaaaattccataaaatcctt 12741292  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  12741293 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 12741332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 28343130 - 28343269
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  28343130 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 28343229  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  28343230 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 28343269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 511 - 638
Target Start/End: Complemental strand, 40460095 - 40459968
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||| |||||||||||||| |||||| |||||  |||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  40460095 tatttttatcattcacgcttgtaagtttgttccttttcccctaaaaatcattgaatcttttgaaattttaaaatcacataaaatcctttgaaatccttaa 40459996  T
Q  611 aattcagtgtgataaatcccataaaatc 638  Q
    || ||||||||||||||||  |||||||    
T  40459995 aagtcagtgtgataaatcctttaaaatc 40459968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 442 - 565
Target Start/End: Complemental strand, 12894528 - 12894404
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnn-ttatttgtttactatttctatcattcacggttgtaagtttgt 540  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||| ||||||||||||||    
T  12894528 atgtatcggtacaaggtcgattttgaatctagagatcactttgtttcggaaaaaaaaattatttgtttactatttctatcattcatggttgtaagtttgt 12894429  T
Q  541 tctttttccgctaaagttcattgaa 565  Q
    ||||||||| |||||||||||||||    
T  12894428 tctttttccactaaagttcattgaa 12894404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 32884572 - 32884712
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttcttttt-ccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcct 597  Q
    ||||||||||| ||||| ||| ||||| | ||| ||||||||||||||| || ||||| ||||||||||||||| |||||||||||||  ||||||||||    
T  32884572 ttatttgtttattatttttattattcatgcttgaaagtttgttcttttttcccctaaaattcattgaatcctttaaaatattaaaatcatataaaatcct 32884671  T
Q  598 ttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||||||||||| ||||||||||||||||  |||||||    
T  32884672 ttgaaatccttaaaagtcagtgtgataaatcctttaaaatc 32884712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 510466 - 510605
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  510466 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 510565  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  510566 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 510605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 23102111 - 23102250
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  23102111 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 23102210  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  23102211 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 23102250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 33891621 - 33891482
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| | ||||||||| ||||||||||||||||||||  ||||| |||||||||||  ||||||| |||||||| ||||||||||||    
T  33891621 ttatttgttcattatttttttcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatctattgaaattttaaaatcacataaaatcctt 33891522  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| | ||||||||||||||  |||||||    
T  33891521 tgaaatccttaaaagttagtgtgataaatcctttaaaatc 33891482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 29614180 - 29614041
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| |||||||||  |||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  29614180 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccttaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 29614081  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  29614080 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 29614041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 499 - 605
Target Start/End: Original strand, 39028906 - 39029012
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||||||||||    
T  39028906 ttatttgtttattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattaattgaatcctttgaaattttaaaatcacataaaatcctt 39029005  T
Q  599 tgaaatc 605  Q
    | |||||    
T  39029006 taaaatc 39029012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 499 - 628
Target Start/End: Complemental strand, 37971763 - 37971635
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| | | ||| || ||||||||||||| ||| |||||||| ||||||||| ||    
T  37971763 ttatttgttcattatttttatcattcacgcttgtaagtttgttcttttttcccaaaaatttattgaatcctttg-aattttaaaatcccataaaatcatt 37971665  T
Q  599 tgaaatccttaaaattcagtgtgataaatc 628  Q
    |||||||||||||| |||||||||||||||    
T  37971664 tgaaatccttaaaagtcagtgtgataaatc 37971635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 499 - 627
Target Start/End: Original strand, 29586332 - 29586460
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| |  |||| |||||||||||||||||||  ||||||||  |||||||| ||    
T  29586332 ttatttgttcattatttttatcattcacgcttgtaagtttgttcttttttccttaaaattcattgaatcctttgaaaatttaaaatcatataaaatcttt 29586431  T
Q  599 tgaaatccttaaaattcagtgtgataaat 627  Q
    | |||||||||||| ||||||||||||||    
T  29586432 taaaatccttaaaagtcagtgtgataaat 29586460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 44121324 - 44121225
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||| ||||||||  |||||||||||    
T  44121324 ttatttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcctttgaaattttaaaatcagataaaatcctt 44121225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 628
Target Start/End: Original strand, 8676165 - 8676282
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| |||| |||| | ||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||| ||||||||| |||||||| ||| |    
T  8676165 tatttttatcgttcatgcttgtaagtttgttcttttttccctaaagttcattgaatcctttaaaattttaaaatcccataaaatcgtttgaaattcttga 8676264  T
Q  611 aattcagtgtgataaatc 628  Q
    || ||| |||||||||||    
T  8676265 aagtcaatgtgataaatc 8676282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 551 - 638
Target Start/End: Complemental strand, 9881622 - 9881535
Alignment:
Q  551 ctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||| |||||||||||||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||||||  |||||||    
T  9881622 ctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttgatatccttaaaagtcagtgtgataaatcctttaaaatc 9881535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 598
Target Start/End: Original strand, 21068186 - 21068285
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||  ||| ||||||||||||||||  ||||| |||||| ||||||||||||  |||||||| ||||||||||||    
T  21068186 ttatttgttcattatttttatcattcacacttgaaagtttgttctttttctcctaaaattcatttaatcctttgaaaatttaaaatcacataaaatcctt 21068285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 560 - 638
Target Start/End: Complemental strand, 28034411 - 28034333
Alignment:
Q  560 attgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||||||||||||| ||||||||  ||||||| ||||||||||||||||| || |||||||||||||  |||||||    
T  28034411 attgaatcctttgaaattttaaaatcatataaaattctttgaaatccttaaaagtctgtgtgataaatcctttaaaatc 28034333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 581 - 635
Target Start/End: Complemental strand, 46035610 - 46035556
Alignment:
Q  581 aaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaa 635  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  46035610 aaatcccataaaatcctttgaaatccttaaaagtcagtgtgataaatcccttaaa 46035556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 595
Target Start/End: Original strand, 39784926 - 39785022
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatc 595  Q
    ||||||||| | ||||| ||||||||||| | |||| |||| ||||||||  ||||| ||||||||||  |||||||| |||||||| ||| |||||    
T  39784926 ttatttgttcattatttttatcattcacgctcgtaaatttgctctttttctcctaaaattcattgaatattttgaaattttaaaatcacatgaaatc 39785022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 598
Target Start/End: Complemental strand, 48136616 - 48136527
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttc--cgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||| ||||||||||| ||| |||||||||||||||   | | ||| |||||||||| ||||||||| |||||||  ||||||||||||    
T  48136616 tatttttatcattcacgcttgcaagtttgttcttttttttcccaaaaattcattgaattctttgaaattttaaaattccataaaatcctt 48136527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 1e-46; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 10728401 - 10728262
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  10728401 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 10728302  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  10728301 tgaaatccttaaaaatcagtgtgataaatcctttaaaatc 10728262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 26108127 - 26108266
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| || |||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  26108127 ttatttgttcattatttttatcattcacgcttttaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 26108226  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  26108227 tgaaatccttaaaattcagtgtgataaatcctttaaaatc 26108266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 499 - 628
Target Start/End: Complemental strand, 51737142 - 51737013
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| |||||    
T  51737142 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaagtcctt 51737043  T
Q  599 tgaaatccttaaaattcagtgtgataaatc 628  Q
    |||||||||||||| |||||||||||||||    
T  51737042 tgaaatccttaaaagtcagtgtgataaatc 51737013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 20833717 - 20833856
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  20833717 ttatttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaattcattgaattctttgaaattttaaaatcacataaaatcctt 20833816  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  20833817 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 20833856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 31645638 - 31645499
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  31645638 ttatttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 31645539  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||| |||||| ||||||||||||||||  |||||||    
T  31645538 tgaaatctttaaaagtcagtgtgataaatcctttaaaatc 31645499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 34483479 - 34483340
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||||||||||    
T  34483479 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcctt 34483380  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  34483379 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 34483340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 18750453 - 18750592
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| || |||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  18750453 ttatttgttcattatttttaacattcacgcttgtaagtttgttctttttaccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 18750552  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  18750553 tgaaatccttaaaagtcggtgtgataaatcctttaaaatc 18750592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 37455658 - 37455797
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||||||  ||||| |||||||||||| ||||||| ||||||||  |||||||||||    
T  37455658 ttatttgtttattatttttatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatccattgaaattttaaaatcatataaaatcctt 37455757  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| |||||| |||||||||  |||||||    
T  37455758 tgaaatccttaaaagtcagtgcgataaatcctttaaaatc 37455797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 52617361 - 52617222
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  52617361 ttatttgttcattatttttatcattcacgcttgaaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttt 52617262  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||||||| || ||||||||||||||||  |||||||    
T  52617261 tgaaatccttataagtcagtgtgataaatcctttaaaatc 52617222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 449 - 598
Target Start/End: Original strand, 44707727 - 44707882
Alignment:
Q  449 ggtacaagctcgattttgaatctagagatcactttgtttcggnnnnnnnn------ttatttgtttactatttctatcattcacggttgtaagtttgttc 542  Q
    ||||||||||||||||||||||||||||||||||||||| |               ||||||||||||||||||||||||||| ||||||||||||||||    
T  44707727 ggtacaagctcgattttgaatctagagatcactttgtttagaaaaaatatatatatttatttgtttactatttctatcattcatggttgtaagtttgttc 44707826  T
Q  543 tttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||    
T  44707827 tttttccactaaaattcattgaatcctttgaaatattaaattcccataaaatcctt 44707882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 511 - 627
Target Start/End: Complemental strand, 44905219 - 44905103
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||    
T  44905219 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctttaaaatccttaa 44905120  T
Q  611 aattcagtgtgataaat 627  Q
    || ||||||||||||||    
T  44905119 aagtcagtgtgataaat 44905103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 511 - 638
Target Start/End: Original strand, 17947050 - 17947177
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||  ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||    
T  17947050 tatttttatcattcacacttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctttgaaatccttaa 17947149  T
Q  611 aattcagtgtgataaatcccataaaatc 638  Q
    || ||| ||||||||||||  |||||||    
T  17947150 aagtcattgtgataaatcctttaaaatc 17947177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 39841830 - 39841691
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||| | |||||||| |||||||||||| ||||| |||| ||||||||||||||| |||||||| ||||||||| ||    
T  39841830 ttatttgttcattatttttatcattcatgcttgtaagtgtgttctttttcccctaaaattcactgaatcctttgaaattttaaaatcccataaaatcatt 39841731  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  39841730 tgaaatccttaaaagtcagtgtgataaatccattaaaatc 39841691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 520 - 638
Target Start/End: Complemental strand, 27239584 - 27239466
Alignment:
Q  520 cattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtg 619  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||| |||||||||||||||||| ||||||| ||||||    
T  27239584 cattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttaaaattttaaaatcacataaaatcctttgaaattcttaaaagtcagtg 27239485  T
Q  620 tgataaatcccataaaatc 638  Q
    ||||||||||  |||||||    
T  27239484 tgataaatcctttaaaatc 27239466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 499 - 627
Target Start/End: Original strand, 38683437 - 38683566
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgct-aaagttcattgaatcctttgaaatattaaaatctcataaaatcct 597  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||||| || ||| |||||||||||||||||||| ||||||||  ||||||||||    
T  38683437 ttatttgtttactaattttatcattcacggttgtaagtttgttttttttccccttaaaattcattgaatcctttgaaattttaaaatcctataaaatcct 38683536  T
Q  598 ttgaaatccttaaaattcagtgtgataaat 627  Q
    || ||||| |||||| ||||||||||||||    
T  38683537 ttaaaatctttaaaaatcagtgtgataaat 38683566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 499 - 628
Target Start/End: Original strand, 54629670 - 54629799
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| || ||||||||||||||| || ||||| ||| |||||||||||||||  |||||||| ||||||||||||    
T  54629670 ttatttgttcattatttttatcattcacgcttataagtttgttcttttccccctaaaattctttgaatcctttgaaaatttaaaatcacataaaatcctt 54629769  T
Q  599 tgaaatccttaaaattcagtgtgataaatc 628  Q
    |||||||||||||| |||||||||||||||    
T  54629770 tgaaatccttaaaagtcagtgtgataaatc 54629799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 499 - 629
Target Start/End: Complemental strand, 36673534 - 36673404
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  36673534 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 36673435  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||||||||||| || |||||||||||||    
T  36673434 tgaaatccttaaaagtctgtgtgataaatcc 36673404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 10661007 - 10661146
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||| | |||||||| |||||||| ||| ||||||||    
T  10661007 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaaccttttgaaattttaaaatcacatgaaatcctt 10661106  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  10661107 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 10661146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 23752768 - 23752669
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  23752768 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 23752669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 536 - 638
Target Start/End: Complemental strand, 50902698 - 50902596
Alignment:
Q  536 tttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaa 635  Q
    |||||||||||||| ||||| ||||||||||| |||||||| |||||||| | |||||||||||||||||||||||| ||||||||||||||||  ||||    
T  50902698 tttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacgtaaaatcctttgaaatccttaaaagtcagtgtgataaatcctttaaa 50902599  T
Q  636 atc 638  Q
    |||    
T  50902598 atc 50902596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 598
Target Start/End: Original strand, 40897941 - 40898040
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||   ||||||||||    
T  40897941 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcatttaaaatcctt 40898040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 499 - 576
Target Start/End: Original strand, 52811170 - 52811247
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaat 576  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  52811170 ttatttgttcattatttctatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaat 52811247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 45254819 - 45254720
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||| | ||||||||||||| ||||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  45254819 ttatttgttcattatttttatcattcatgcttgtaagtttgttttttttcccctaaaattcattgaattctttgaaattttaaaatcacataaaatcctt 45254720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 499 - 598
Target Start/End: Original strand, 48379970 - 48380069
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| || ||| |||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  48379970 ttatttgttcattatttttaacatccacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctt 48380069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 612
Target Start/End: Original strand, 11432366 - 11432479
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||| | ||||||||||| ||||||||| || || || |||||||| |||||||| |||||||| ||| ||||||||    
T  11432366 ttatttgttcattatttttatcattcatgcttgtaagtttgctctttttcccctcaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 11432465  T
Q  599 tgaaatccttaaaa 612  Q
    | ||||||||||||    
T  11432466 taaaatccttaaaa 11432479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 517 - 598
Target Start/End: Complemental strand, 50761470 - 50761389
Alignment:
Q  517 tatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||| ||||||||    
T  50761470 tatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacatgaaatcctt 50761389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 499 - 628
Target Start/End: Original strand, 39038900 - 39039025
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| ||| ||||||||||||||||| ||| |    |  |||||||||||||| |||||||| ||||||||| ||    
T  39038900 ttatttgttcattatttttatcatccacgcttgaaagtttgttctttttcccctata----agagaatcctttgaaattttaaaatcacataaaatcttt 39038995  T
Q  599 tgaaatccttaaaattcagtgtgataaatc 628  Q
    ||||||||||| || |||||||||||||||    
T  39038996 tgaaatccttataagtcagtgtgataaatc 39039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 563 - 638
Target Start/End: Original strand, 52811266 - 52811341
Alignment:
Q  563 gaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||| ||||||| |||||||| |||||||||||||||||||||||||| ||| ||| ||||||||  |||||||    
T  52811266 gaatccgttgaaattttaaaatcacataaaatcctttgaaatccttaaaagtcaatgtaataaatcctttaaaatc 52811341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 503 - 585
Target Start/End: Complemental strand, 52023258 - 52023176
Alignment:
Q  503 ttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatc 585  Q
    |||||||||| || ||||||| ||||||||||||||||||||| ||  ||||| || ||||||| ||||||||| ||||||||    
T  52023258 ttgtttactaattttatcattaacggttgtaagtttgttctttatctcctaaaatttattgaatactttgaaattttaaaatc 52023176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 1e-46; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 25288975 - 25289114
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  25288975 ttatttgttcattatttctatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 25289074  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  25289075 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 25289114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 13832943 - 13832804
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  13832943 ttatttgttcattatttttatcattcacgcttgtaagtttgttcttttttccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 13832844  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  13832843 tgaaatccttaaaagtcggtgtgataaatcctttaaaatc 13832804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 512 - 638
Target Start/End: Complemental strand, 214842 - 214716
Alignment:
Q  512 atttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaa 611  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  214842 atttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcccataaaatcctttgaaattcttaaa 214743  T
Q  612 attcagtgtgataaatcccataaaatc 638  Q
    | ||||||| ||||||||| |||||||    
T  214742 agtcagtgtcataaatcccttaaaatc 214716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 3575664 - 3575803
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||| ||||||  ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  3575664 ttatttgttcattatttttatcattcacgtttgtaagtttgttttttttctcctaaaattcattgaatcttttgaaattttaaaatcacataaaatcctt 3575763  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  3575764 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 3575803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 28739406 - 28739267
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | || || ||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||||||  |||||||||||    
T  28739406 ttatttgttcattacttttatcattcacgcttgtaagtttgttctttttcccctaaaaatcattgaatcctttgaaattttaaaatcatataaaatcctt 28739307  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  28739306 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 28739267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 28845398 - 28845537
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| |||||||||| |||||||||| ||||| || ||||||||||||||||| |||||||| ||||||||||||    
T  28845398 ttatttgttcattatttttatcatccacgcttgtaagtttcttctttttcccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcctt 28845497  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  28845498 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 28845537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 43079300 - 43079439
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||||||||   ||||| |||||||||||||||||||| |||||||| |||||||| |||    
T  43079300 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttttcctaaaattcattgaatcctttgaaattttaaaatcacataaaattctt 43079399  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  43079400 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 43079439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 10658251 - 10658390
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||| | |||||||||| || ||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  10658251 ttatttgttcattatttttatcattcatgcttgtaagtttattttttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 10658350  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||| |||||| ||||||||||||||||  |||||||    
T  10658351 tgaaatctttaaaagtcagtgtgataaatcctttaaaatc 10658390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 33136414 - 33136553
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||| ||||||| ||| ||||||||| ||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  33136414 ttatttgttcattatttttattattcacgcttgaaagtttgttgtttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 33136513  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||| |||||||||| ||||||||||||||||  |||||||    
T  33136514 tgatatccttaaaagtcagtgtgataaatcctttaaaatc 33136553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 379749 - 379879
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||  ||||||||| ||||||||  |||||||||||    
T  379749 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaactctttgaaattttaaaatcatataaaatcctt 379848  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||||||||||| || |||||||||||||    
T  379849 tgaaatccttaaaagtcggtgtgataaatcc 379879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 18178092 - 18178231
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| ||||||||||| ||| |||| |||||||| ||| ||||||||    
T  18178092 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaattcattgaatcttttaaaattttaaaatcacatgaaatcctt 18178191  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  18178192 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 18178231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 26789605 - 26789744
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  26789605 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 26789704  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  26789705 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 26789744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 3464423 - 3464562
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| ||| ||||||||||||||| | ||||| || ||||||||||||||||| |||||||| ||||||||||||    
T  3464423 ttatttgttcattatttttatcatccacgcttgaaagtttgttcttttttccctaaaatttattgaatcctttgaaattttaaaatcacataaaatcctt 3464522  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||| ||||||| || |||||||||||||  |||||||    
T  3464523 tgaaattcttaaaagtctgtgtgataaatcctttaaaatc 3464562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 7027724 - 7027863
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| |||||| |    
T  7027724 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatccgt 7027823  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  7027824 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 7027863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 500 - 598
Target Start/End: Complemental strand, 6223957 - 6223860
Alignment:
Q  500 tatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  6223957 tatttgtttattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatccttt-aaattttaaaatcacataaaatcctt 6223860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 571 - 627
Target Start/End: Original strand, 2373859 - 2373915
Alignment:
Q  571 tgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaat 627  Q
    |||||| ||||||| ||||||||||||||||||||||||||| || || ||||||||    
T  2373859 tgaaatgttaaaatttcataaaatcctttgaaatccttaaaagtcggtatgataaat 2373915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 229 - 265
Target Start/End: Original strand, 41869774 - 41869810
Alignment:
Q  229 atgtacaaggaataccgtgatactactctaaacggtg 265  Q
    |||||||||||||||||||||||||||||||||||||    
T  41869774 atgtacaaggaataccgtgatactactctaaacggtg 41869810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 566 - 612
Target Start/End: Complemental strand, 17326778 - 17326732
Alignment:
Q  566 tcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaa 612  Q
    ||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  17326778 tcctttgaaatattaaaatctcataaaattctttaaaatctttaaaa 17326732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 605
Target Start/End: Complemental strand, 18175711 - 18175670
Alignment:
Q  564 aatcctttgaaatattaaaatctcataaaatcctttgaaatc 605  Q
    |||||||| |||| ||||||||||||| ||||||||||||||    
T  18175711 aatcctttcaaatcttaaaatctcatacaatcctttgaaatc 18175670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 605
Target Start/End: Original strand, 27979763 - 27979804
Alignment:
Q  564 aatcctttgaaatattaaaatctcataaaatcctttgaaatc 605  Q
    |||||||| |||| ||||||||||||| ||||||||||||||    
T  27979763 aatcctttcaaatcttaaaatctcatagaatcctttgaaatc 27979804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 605
Target Start/End: Original strand, 28066293 - 28066334
Alignment:
Q  564 aatcctttgaaatattaaaatctcataaaatcctttgaaatc 605  Q
    |||||||| |||| ||||||||||||| ||||||||||||||    
T  28066293 aatcctttcaaatcttaaaatctcatagaatcctttgaaatc 28066334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 41870034 - 41870067
Alignment:
Q  263 gtgattcagtgaatcacatttcccttttcatatt 296  Q
    |||||||||||||||||||||||||| |||||||    
T  41870034 gtgattcagtgaatcacatttcccttctcatatt 41870067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 4e-46; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 37857698 - 37857828
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  37857698 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 37857797  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    |||||||||||||| ||||||||||||||||    
T  37857798 tgaaatccttaaaagtcagtgtgataaatcc 37857828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 511 - 638
Target Start/End: Original strand, 32498723 - 32498850
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  32498723 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttgaaatccttaa 32498822  T
Q  611 aattcagtgtgataaatcccataaaatc 638  Q
    || ||||||||||||||||  |||||||    
T  32498823 aagtcagtgtgataaatcctttaaaatc 32498850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 7467142 - 7467281
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| ||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||    
T  7467142 ttatttgttcattatttttatcatccacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttaaaattttaaaatcacataaaatcctt 7467241  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| |||| |||||||||||  |||||||    
T  7467242 tgaaatccttaaaagtcagagtgataaatcctttaaaatc 7467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 18305351 - 18305212
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||||||||||  |||| || ||||||||||||||||| |||||||| ||||||||||||    
T  18305351 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccttaaaatttattgaatcctttgaaattttaaaatcacataaaatcctt 18305252  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| | ||||||||||||||  |||||||    
T  18305251 tgaaatccttaaaagttagtgtgataaatcctttaaaatc 18305212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 19717255 - 19717116
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  19717255 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcatt 19717156  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || || ||||||||||  |||||||    
T  19717155 tgaaatccttaaaagtctgtatgataaatcctttaaaatc 19717116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 511 - 629
Target Start/End: Complemental strand, 9287861 - 9287743
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||| ||||||||||||||    
T  9287861 tatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcttttgaaattttaaaatcacataaaatcttttgaaatccttaa 9287762  T
Q  611 aattcagtgtgataaatcc 629  Q
    || ||||||||||||||||    
T  9287761 aagtcagtgtgataaatcc 9287743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 43166057 - 43165918
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| | ||||||||||||||||| |  |||| |||||| ||||||||||||| |||||||| ||||||||||||    
T  43166057 ttatttgttcattatttttatcattcacgctggtaagtttgttcttttttccataaaattcattaaatcctttgaaattttaaaatcacataaaatcctt 43165958  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||  |||||||    
T  43165957 tgaaatccttaaaagtcagtgtgataaatcctttaaaatc 43165918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 626
Target Start/End: Complemental strand, 43307887 - 43307760
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||| ||||||||    
T  43307887 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacattaaatcctt 43307788  T
Q  599 tgaaatccttaaaattcagtgtgataaa 626  Q
    | |||||||||||| | |||||||||||    
T  43307787 taaaatccttaaaagtgagtgtgataaa 43307760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 44725171 - 44725032
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  44725171 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 44725072  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || |||||||||||||  |||||||    
T  44725071 tgaaatccttaaaagtctgtgtgataaatcctttaaaatc 44725032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 26856926 - 26857056
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||  | ||||||||||| |||||||| ||||||||||||    
T  26856926 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcatcaagtcctttgaaattttaaaatcacataaaatcctt 26857025  T
Q  599 tgaaatccttaaaattcagtgtgataaatcc 629  Q
    ||||||| |||||| ||||||||||||||||    
T  26857026 tgaaatctttaaaagtcagtgtgataaatcc 26857056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 18958108 - 18957969
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||  ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||  |||||||||||    
T  18958108 ttatttgttcattatttttatcattcacacttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcatataaaatcctt 18958009  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||  | ||||||||||  |||||||    
T  18958008 tgaaatccttaaaagtctatatgataaatcctttaaaatc 18957969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 511 - 638
Target Start/End: Complemental strand, 42304989 - 42304862
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaa 610  Q
    ||||| ||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  42304989 tatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctttgaaatccttaa 42304890  T
Q  611 aattcagtgtgataaatcccataaaatc 638  Q
    || || |  ||||||||||  |||||||    
T  42304889 aagtctgaatgataaatcctttaaaatc 42304862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 533 - 638
Target Start/End: Complemental strand, 20831320 - 20831215
Alignment:
Q  533 aagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccat 632  Q
    ||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||  |||||||||||||||| ||||||||||||||||  |    
T  20831320 aagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaattatttgaaatccttaaaagtcagtgtgataaatccttt 20831221  T
Q  633 aaaatc 638  Q
    ||||||    
T  20831220 aaaatc 20831215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 511 - 598
Target Start/End: Complemental strand, 39466884 - 39466797
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||| ||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  39466884 tatttttatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 39466797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 499 - 586
Target Start/End: Complemental strand, 40012549 - 40012462
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatct 586  Q
    |||||| ||||||| || |||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  40012549 ttatttttttactaattttatcattcacggttgtaaatttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatct 40012462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 511 - 609
Target Start/End: Original strand, 16365111 - 16365209
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatcctta 609  Q
    ||||| ||||||||||| ||| ||||||||||| ||||| ||||| |||||||||||||||||||| |||||||| ||||||||| ||| |||||||||    
T  16365111 tatttttatcattcacgcttgaaagtttgttctatttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttttaaaatcctta 16365209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 14781512 - 14781413
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| || |||||||| |||||||| |||||||| ||| ||||||||    
T  14781512 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatttattgaatcttttgaaattttaaaatcacatgaaatcctt 14781413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 564 - 638
Target Start/End: Original strand, 7467292 - 7467366
Alignment:
Q  564 aatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||| |||| |||||||||||  |||||||    
T  7467292 aatcctttgaaattttaaaatcacataaaatcctttgaaatccttaaaagtcagagtgataaatcctttaaaatc 7467366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 31626128 - 31626259
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttcttttt-ccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcct 597  Q
    ||||||||| | ||||| ||||||||||| || |||||||||||||||| || ||||| |||||||||         || |||||||| ||||||||| |    
T  31626128 ttatttgttcattatttttatcattcacgcttataagtttgttcttttttcccctaaaattcattgaa---------attttaaaatcacataaaatctt 31626218  T
Q  598 ttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||||||||||| ||||||||||||||||  |||||||    
T  31626219 ttgaaatccttaaaagtcagtgtgataaatcctttaaaatc 31626259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 499 - 576
Target Start/End: Complemental strand, 10294737 - 10294660
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaat 576  Q
    ||||||||| | ||||| ||||||||||| |||||||||||||  |||| | ||||| ||||||||||||||||||||    
T  10294737 ttatttgttcattatttttatcattcacgcttgtaagtttgtttgtttttccctaaaattcattgaatcctttgaaat 10294660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 592 - 638
Target Start/End: Complemental strand, 10294672 - 10294626
Alignment:
Q  592 aatcctttgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||||||||||| ||||| ||||||||||||||||  |||||||    
T  10294672 aatcctttgaaatccgtaaaagtcagtgtgataaatcctttaaaatc 10294626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 1151674 - 1151535
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  1151674 ttatttgttcattatttttatcaatcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttt 1151575  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  1151574 tgaaatccttaaaagtcagtgtgataaatcccttaaaatc 1151535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 13926752 - 13926891
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  13926752 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 13926851  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    | |||| ||||||| ||||||||||||||||  |||||||    
T  13926852 taaaattcttaaaagtcagtgtgataaatcctttaaaatc 13926891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 40013092 - 40012953
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  40013092 ttatttgttcattatttttatcatttacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 40012993  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| || || ||||||||||  |||||||    
T  40012992 tgaaatccttaaaagtctgtatgataaatcctttaaaatc 40012953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 499 - 628
Target Start/End: Original strand, 5949938 - 5950067
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| ||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||| | ||||||||||||    
T  5949938 ttatttgttcattatttttatcatccacgcttgtaagtttgttctttttcctctaaaattcatcgaatcctttgaaattttaaaaccccataaaatcctt 5950037  T
Q  599 tgaaatccttaaaattcagtgtgataaatc 628  Q
    |||||||||||||| |||||||||||||||    
T  5950038 tgaaatccttaaaagtcagtgtgataaatc 5950067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 4549640 - 4549501
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| |||||| |||| ||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||| ||    
T  4549640 ttatttgttcattatttttatcatccacgcttgtaagtttgttctttttcttctaaaattcattgaatcctttgaaattttaaaatcacataaaatcttt 4549541  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||| ||||||| ||||||||||||||||  |||||||    
T  4549540 tgaaattcttaaaagtcagtgtgataaatcctttaaaatc 4549501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 512 - 628
Target Start/End: Complemental strand, 7947395 - 7947279
Alignment:
Q  512 atttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaaatccttaaa 611  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||  ||||||||||||||||| ||| ||    
T  7947395 atttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcatataaaatcctttgaaattctttaa 7947296  T
Q  612 attcagtgtgataaatc 628  Q
    | |||||||||||||||    
T  7947295 agtcagtgtgataaatc 7947279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 499 - 598
Target Start/End: Original strand, 39853182 - 39853281
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  39853182 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 39853281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 499 - 605
Target Start/End: Complemental strand, 4239845 - 4239739
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||||| |||||  ||||||||||||||||||  |||||||| ||||||||||||    
T  4239845 ttatttgttcattatttttatcattcacgcttgtaagtttgttctttttcccctaaaactcattgaatcctttgaaaatttaaaatcacataaaatcctt 4239746  T
Q  599 tgaaatc 605  Q
    |||||||    
T  4239745 tgaaatc 4239739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 511 - 598
Target Start/End: Original strand, 37014699 - 37014785
Alignment:
Q  511 tatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||||    
T  37014699 tatttttatcattcacgcttgtaagtttgttctttttcc-ctaaaattcattgaatcatttgaaattttaaaatcacataaaatcctt 37014785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 18929414 - 18929616
Alignment:
Q  19 tgttggcatgtgcagcacttcataactttcttcgtaaagaatgtcgttccgatgaatttccaattgaaccttctaacgagtcttcatcttcatcttcaat 118  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||  || | |||||||| || |||||| |  |||| ||||||| ||||         |    
T  18929414 tgttggcaagtgcaacacttcataactttcttcgtaaataatgttatttcaatgaattttcacttgaacatattaacaagtcttcgtctttgg------t 18929507  T
Q  119 gttacctattcatgaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggactaatttaggtttagat 218  Q
    ||||||  ||||  ||||||||||| || ||  || |||||||||||||||| || || ||||| |||||||| ||||||||| |||| |||||||||||    
T  18929508 gttacccgttcaataagacaataattattaatccattgttcaaacacaagagtaaaaatgagaaaatgctaatttatggaggaataatataggtttagat 18929607  T
Q  219 atgtggaga 227  Q
    |||||||||    
T  18929608 atgtggaga 18929616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 595
Target Start/End: Complemental strand, 1459560 - 1459464
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatc 595  Q
    ||||||||| | ||||||||||||||||| ||||| |||| || ||| ||  ||||| |||||||||||||||||||| |||||||| |||||||||    
T  1459560 ttatttgttcattatttctatcattcacgcttgtatgttttttttttctctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatc 1459464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 598
Target Start/End: Complemental strand, 13999479 - 13999380
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||| ||||||||| ||||| |  | |||||| |||||||| |||||||| ||| ||||||||    
T  13999479 ttatttgttcattatttttatcattcacgcttgtaagtttgctctttttcccctaaaatatactgaatcttttgaaattttaaaatcacatgaaatcctt 13999380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 263
Target Start/End: Original strand, 39709458 - 39709492
Alignment:
Q  229 atgtacaaggaataccgtgatactactctaaacgg 263  Q
    |||||||||||||||||||||||||||||||||||    
T  39709458 atgtacaaggaataccgtgatactactctaaacgg 39709492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 315 - 355
Target Start/End: Original strand, 39709795 - 39709835
Alignment:
Q  315 aagataatcttgttttaagaaacttcattaccagcgagaca 355  Q
    |||||||||||||||||||||||||||||| |||| |||||    
T  39709795 aagataatcttgttttaagaaacttcattatcagcaagaca 39709835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 6055476 - 6055405
Alignment:
Q  132 gaagacaataatgatgaactcaatgttcaaacacaagagcaagaacgagaagatgctaatatatggaggact 203  Q
    |||||||||||| ||||||||| | ||||||||||| ||||| |||||||| | | || | |||||||||||    
T  6055476 gaagacaataattatgaactcattattcaaacacaatagcaaaaacgagaataggttagtttatggaggact 6055405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 39709718 - 39709761
Alignment:
Q  263 gtgattcagtgaatcacatttcccttttcatattgggagatgct 306  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||    
T  39709718 gtgattcagtgaatcacatttcgcttctcatattgggagttgct 39709761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 489
Target Start/End: Original strand, 39709917 - 39709964
Alignment:
Q  442 atgtaccggtacaagctcgattttgaatctagagatcactttgtttcg 489  Q
    |||||| |||||||||| |||||||||||||| ||||||||| |||||    
T  39709917 atgtactggtacaagcttgattttgaatctagcgatcactttatttcg 39709964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 88; Significance: 6e-42; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 57444 - 57305
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||||||||| | ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  57444 ttatttgttcattatttgtatcattcacgcttgtaagtttgttcttttttctctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 57345  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||||| |||| |||||||||||  |||||||    
T  57344 tgaaatccttaaaagtcagcgtgataaatcctttaaaatc 57305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 499 - 628
Target Start/End: Complemental strand, 36679 - 36550
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||||||||| ||||||||||||| ||||||| ||||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  36679 ttatttgttcattatttttatcattcacgcttgtaagtttgttttttttcccctaaaattcattgaattctttgaaattttaaaatcacataaaatcctt 36580  T
Q  599 tgaaatccttaaaattcagtgtgataaatc 628  Q
    |||||| ||||||| |||||||||||||||    
T  36579 tgaaatgcttaaaagtcagtgtgataaatc 36550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0940 (Bit Score: 80; Significance: 3e-37; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 3848 - 3709
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||| ||||| ||||| ||||||||||||||||||||  ||||| |||||||||||||||||||| |||||||| ||||||||||||    
T  3848 ttatttgttcattatttttatcactcacgcttgtaagtttgttctttttctcctaaaattcattgaatcctttgaaattttaaaatcacataaaatcctt 3749  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||||| | || |||||||||||||  |||||||    
T  3748 tgaaatccttaatagtctgtgtgataaatcctttaaaatc 3709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1521 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 1567 - 1428
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| |||||||| |||||||||||| ||||| |||||| ||| ||||||||| |||||||  ||||||||||||    
T  1567 ttatttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctt 1468  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||  |||||| ||||||||||||||||  |||||||    
T  1467 tgaaatttttaaaagtcagtgtgataaatcctttaaaatc 1428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 76; Significance: 8e-35; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 16422 - 16283
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| |||||||| |||||||||||| ||||| |||||| ||| ||||||||| |||||||  ||||||||||||    
T  16422 ttatttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctt 16323  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||  |||||| ||||||||||||||||  |||||||    
T  16322 tgaaatttttaaaagtcagtgtgataaatcctttaaaatc 16283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 76; Significance: 8e-35; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Complemental strand, 20649 - 20510
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| |||||||| |||||||||||| ||||| |||||| ||| ||||||||| |||||||  ||||||||||||    
T  20649 ttatttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctt 20550  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||  |||||| ||||||||||||||||  |||||||    
T  20549 tgaaatttttaaaagtcagtgtgataaatcctttaaaatc 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 499 - 638
Target Start/End: Original strand, 29152 - 29291
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctt 598  Q
    ||||||||| | ||||||||||||||||| |||||||| |||||||||||| ||||| |||||| ||| ||||||||| |||||||  ||||||||||||    
T  29152 ttatttgttcattatttctatcattcacgcttgtaagtatgttctttttcccctaaaattcatttaattctttgaaattttaaaataacataaaatcctt 29251  T
Q  599 tgaaatccttaaaattcagtgtgataaatcccataaaatc 638  Q
    ||||||  |||||| ||||||||||||||||  |||||||    
T  29252 tgaaatttttaaaagtcagtgtgataaatcctttaaaatc 29291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 503 - 638
Target Start/End: Complemental strand, 3384 - 3249
Alignment:
Q  503 ttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatctcataaaatcctttgaa 602  Q
    ||||||| ||||| | ||||||||| |||||| |||||||||||||  ||||| |||||||||||  ||||||| |||||||| |||||||| |||||||    
T  3384 ttgtttattatttttgtcattcacgtttgtaaatttgttctttttctcctaaaattcattgaatcacttgaaattttaaaatcacataaaattctttgaa 3285  T
Q  603 atccttaaaattcagtgtgataaatcccataaaatc 638  Q
    |||||||||| ||||||||||||||||  |||||||    
T  3284 atccttaaaagtcagtgtgataaatcctttaaaatc 3249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 499 - 585
Target Start/End: Complemental strand, 39017 - 38931
Alignment:
Q  499 ttatttgtttactatttctatcattcacggttgtaagtttgttctttttccgctaaagttcattgaatcctttgaaatattaaaatc 585  Q
    ||||||||| ||||||| ||||||||| | ||||||||||||||||||| | ||||| |||||||||||||||||||| ||||||||    
T  39017 ttatttgttcactatttttatcattcatgcttgtaagtttgttcttttttccctaaaattcattgaatcctttgaaattttaaaatc 38931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 605
Target Start/End: Complemental strand, 1158 - 1117
Alignment:
Q  564 aatcctttgaaatattaaaatctcataaaatcctttgaaatc 605  Q
    |||||||| |||| ||||||||||||||| ||||||||||||    
T  1158 aatcctttcaaatcttaaaatctcataaactcctttgaaatc 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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