View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8061_low_93 (Length: 203)
Name: NF8061_low_93
Description: NF8061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8061_low_93 |
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Alignment Details
Target: chr2 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 45521095 - 45521280
Alignment:
| Q |
1 |
ggttcacgtccatgtctcatcaatgcccccactggaaaggtctacacctaccacgacgtccaactcacctcccgtaaagttgcctctggtcttcacaaat |
100 |
Q |
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| T |
45521095 |
ggttcacgtccatgtctcatcaatgcccccaccggaaaggtctacacctaccacgacgtccaactcacctcccgtaaagttgcctctggtcttcacaaat |
45521194 |
T |
|
| Q |
101 |
tgggactccaacaaggtgaagtcatcatgatcctccttcccaattcccctgaattcgtcttctcctttcttggtgcttcttatctc |
186 |
Q |
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| T |
45521195 |
tgggactccaacaaggtgaagtcatcatgatcctccttcccaattcccctgaattcgtcttctcctttcttgctgcttcttatctc |
45521280 |
T |
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