View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8062_high_3 (Length: 388)

Name: NF8062_high_3
Description: NF8062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8062_high_3
NF8062_high_3
[»] chr3 (87 HSPs)
chr3 (1-375)||(2671143-2671517)
chr3 (2-375)||(40372335-40372727)
chr3 (1-375)||(7167410-7167804)
chr3 (2-375)||(8477530-8477923)
chr3 (1-375)||(9090839-9091232)
chr3 (1-375)||(8738601-8738994)
chr3 (1-375)||(28503397-28503795)
chr3 (1-375)||(28501230-28501628)
chr3 (126-375)||(1306113-1306360)
chr3 (1-142)||(27352159-27352300)
chr3 (5-375)||(27986021-27986379)
chr3 (5-375)||(26928163-26928522)
chr3 (2-142)||(22172741-22172880)
chr3 (3-141)||(54634790-54634928)
chr3 (191-307)||(22172985-22173100)
chr3 (208-375)||(32143486-32143649)
chr3 (3-142)||(6716165-6716304)
chr3 (3-142)||(6718349-6718488)
chr3 (3-108)||(18656843-18656949)
chr3 (3-141)||(45282646-45282784)
chr3 (30-186)||(10208885-10209041)
chr3 (208-372)||(33386435-33386595)
chr3 (30-141)||(4598888-4599000)
chr3 (30-141)||(4601109-4601221)
chr3 (30-141)||(10058134-10058246)
chr3 (30-141)||(10060356-10060468)
chr3 (30-141)||(10062578-10062690)
chr3 (30-141)||(10064800-10064912)
chr3 (30-141)||(25637120-25637231)
chr3 (208-375)||(27453123-27453284)
chr3 (3-115)||(1306411-1306523)
chr3 (16-108)||(8512642-8512734)
chr3 (16-108)||(8517522-8517614)
chr3 (30-141)||(10055912-10056024)
chr3 (30-141)||(10067022-10067134)
chr3 (30-141)||(10211085-10211197)
chr3 (208-372)||(27974712-27974871)
chr3 (16-108)||(2672512-2672604)
chr3 (16-108)||(24968519-24968611)
chr3 (31-109)||(32475885-32475963)
chr3 (31-109)||(32480743-32480821)
chr3 (208-313)||(40592542-40592645)
chr3 (16-108)||(2676668-2676760)
chr3 (5-142)||(32143725-32143864)
chr3 (208-313)||(1736064-1736167)
chr3 (208-313)||(8370249-8370352)
chr3 (212-361)||(16264526-16264671)
chr3 (208-313)||(21711445-21711548)
chr3 (208-361)||(39032315-39032463)
chr3 (208-313)||(47923664-47923767)
chr3 (206-313)||(6794473-6794578)
chr3 (5-142)||(23198308-23198447)
chr3 (206-313)||(26299211-26299316)
chr3 (30-141)||(3617141-3617252)
chr3 (5-107)||(800768-800870)
chr3 (208-313)||(24694926-24695029)
chr3 (212-313)||(36029316-36029415)
chr3 (206-313)||(3323449-3323554)
chr3 (206-313)||(3328115-3328220)
chr3 (205-313)||(4386733-4386840)
chr3 (9-115)||(23200536-23200642)
chr3 (208-313)||(37725898-37726001)
chr3 (210-313)||(48438439-48438539)
chr3 (208-313)||(27026929-27027032)
chr3 (126-179)||(22172904-22172957)
chr3 (206-313)||(1417249-1417354)
chr3 (206-313)||(8126853-8126958)
chr3 (5-142)||(33386220-33386358)
chr3 (206-313)||(37466518-37466623)
chr3 (211-313)||(25929159-25929258)
chr3 (208-304)||(23410529-23410624)
chr3 (208-313)||(27038274-27038377)
chr3 (211-313)||(35925701-35925803)
chr3 (202-313)||(3715753-3715865)
chr3 (204-313)||(25796003-25796113)
chr3 (212-313)||(40844878-40844977)
chr3 (52-117)||(7782538-7782603)
chr3 (208-307)||(23392106-23392204)
chr3 (5-142)||(37726078-37726216)
chr3 (263-306)||(18656614-18656657)
chr3 (4-142)||(37408118-37408256)
chr3 (143-186)||(27352320-27352363)
chr3 (5-87)||(27453416-27453498)
chr3 (244-310)||(47649796-47649862)
chr3 (272-313)||(10274605-10274646)
chr3 (126-194)||(23198238-23198305)
chr3 (5-45)||(27974497-27974537)
[»] chr4 (59 HSPs)
chr4 (2-373)||(29760810-29761179)
chr4 (2-375)||(24742106-24742498)
chr4 (1-307)||(51520637-51520972)
chr4 (6-307)||(9223982-9224312)
chr4 (6-307)||(9228769-9229099)
chr4 (126-375)||(28468220-28468470)
chr4 (8-140)||(56141596-56141728)
chr4 (6-118)||(18712338-18712449)
chr4 (30-141)||(7122374-7122485)
chr4 (3-108)||(5733061-5733167)
chr4 (30-142)||(8393089-8393201)
chr4 (16-108)||(45347410-45347502)
chr4 (16-108)||(45356891-45356983)
chr4 (2-108)||(18856124-18856231)
chr4 (217-307)||(18712581-18712671)
chr4 (5-139)||(28468060-28468196)
chr4 (8-115)||(13992686-13992793)
chr4 (30-107)||(7124596-7124673)
chr4 (30-141)||(5135756-5135868)
chr4 (30-141)||(5137982-5138094)
chr4 (30-142)||(8395298-8395410)
chr4 (208-371)||(31985404-31985563)
chr4 (208-313)||(3777772-3777875)
chr4 (208-313)||(16623064-16623167)
chr4 (5-107)||(31495717-31495819)
chr4 (126-307)||(3814202-3814383)
chr4 (7-108)||(3814421-3814521)
chr4 (208-313)||(5268971-5269074)
chr4 (208-313)||(5396442-5396545)
chr4 (208-313)||(10047604-10047707)
chr4 (206-313)||(25861802-25861907)
chr4 (208-313)||(6743186-6743289)
chr4 (208-313)||(16628643-16628746)
chr4 (208-313)||(36315001-36315104)
chr4 (208-313)||(36329210-36329313)
chr4 (211-313)||(8689270-8689370)
chr4 (212-377)||(5143422-5143582)
chr4 (126-306)||(45347540-45347721)
chr4 (208-282)||(54867431-54867505)
chr4 (126-179)||(56141735-56141788)
chr4 (206-313)||(42599344-42599448)
chr4 (208-313)||(5112460-5112564)
chr4 (126-179)||(18712478-18712531)
chr4 (126-179)||(18856033-18856086)
chr4 (208-312)||(38152208-38152311)
chr4 (126-306)||(45357021-45357201)
chr4 (204-307)||(6542378-6542480)
chr4 (204-307)||(51336933-51337035)
chr4 (126-178)||(5732971-5733023)
chr4 (203-313)||(3793843-3793954)
chr4 (263-306)||(5732844-5732887)
chr4 (204-313)||(24334034-24334144)
chr4 (211-375)||(5147842-5148001)
chr4 (52-142)||(31985236-31985328)
chr4 (8-67)||(5148157-5148216)
chr4 (263-306)||(18855906-18855949)
chr4 (208-313)||(39774075-39774179)
chr4 (30-67)||(56141713-56141750)
chr4 (126-186)||(13992595-13992654)
[»] chr2 (49 HSPs)
chr2 (1-375)||(11098465-11098858)
chr2 (2-375)||(14291654-14292046)
chr2 (1-375)||(9295940-9296332)
chr2 (203-375)||(3491915-3492085)
chr2 (168-313)||(25409854-25410000)
chr2 (30-141)||(12647749-12647860)
chr2 (5-115)||(3492184-3492294)
chr2 (5-115)||(25410073-25410183)
chr2 (126-307)||(39811700-39811894)
chr2 (210-375)||(40738997-40739158)
chr2 (7-103)||(39811561-39811657)
chr2 (5-140)||(4484703-4484840)
chr2 (5-115)||(30833004-30833114)
chr2 (5-139)||(32289231-32289367)
chr2 (16-108)||(19344824-19344916)
chr2 (16-108)||(19349682-19349774)
chr2 (211-372)||(36757536-36757692)
chr2 (206-313)||(14698778-14698883)
chr2 (206-313)||(33118358-33118463)
chr2 (208-362)||(28258948-28259098)
chr2 (208-313)||(33528395-33528498)
chr2 (211-313)||(21630168-21630268)
chr2 (211-361)||(23078245-23078391)
chr2 (211-313)||(34389074-34389174)
chr2 (5-107)||(6266357-6266459)
chr2 (208-313)||(20522445-20522548)
chr2 (206-313)||(10445236-10445341)
chr2 (217-313)||(17865428-17865522)
chr2 (5-142)||(28258733-28258871)
chr2 (5-142)||(40739235-40739374)
chr2 (324-375)||(25398660-25398711)
chr2 (324-375)||(25403798-25403849)
chr2 (324-375)||(25407787-25407838)
chr2 (208-313)||(8389920-8390023)
chr2 (208-313)||(13569552-13569655)
chr2 (204-313)||(31056266-31056376)
chr2 (52-108)||(32247188-32247244)
chr2 (208-310)||(10707023-10707123)
chr2 (204-313)||(34682097-34682207)
chr2 (126-179)||(32247097-32247150)
chr2 (263-306)||(32246968-32247011)
chr2 (204-313)||(8040287-8040397)
chr2 (244-313)||(39483156-39483223)
chr2 (246-313)||(2869501-2869566)
chr2 (226-313)||(2837816-2837903)
chr2 (206-313)||(35397732-35397839)
chr2 (244-313)||(41586357-41586425)
chr2 (126-194)||(4484631-4484698)
chr2 (126-186)||(30833146-30833205)
[»] chr7 (56 HSPs)
chr7 (1-375)||(20357106-20357478)
chr7 (2-375)||(2058132-2058526)
chr7 (2-375)||(21639973-21640344)
chr7 (2-375)||(1532983-1533374)
chr7 (5-375)||(21646171-21646560)
chr7 (6-305)||(4873310-4873638)
chr7 (3-142)||(24789507-24789646)
chr7 (3-375)||(18413804-18414194)
chr7 (3-375)||(18408928-18409318)
chr7 (3-186)||(20343580-20343761)
chr7 (126-307)||(12397091-12397282)
chr7 (126-307)||(31109294-31109489)
chr7 (6-142)||(12406639-12406774)
chr7 (11-108)||(24023907-24024004)
chr7 (189-307)||(24024115-24024232)
chr7 (30-186)||(32060626-32060781)
chr7 (30-141)||(6592703-6592814)
chr7 (30-141)||(6594919-6595030)
chr7 (5-195)||(48408481-48408672)
chr7 (5-117)||(43504526-43504638)
chr7 (5-140)||(39731016-39731153)
chr7 (2-141)||(18392562-18392702)
chr7 (5-108)||(21811820-21811924)
chr7 (16-108)||(24265770-24265862)
chr7 (16-103)||(31109164-31109251)
chr7 (201-313)||(46516069-46516179)
chr7 (233-305)||(12406513-12406585)
chr7 (31-141)||(1562369-1562479)
chr7 (208-313)||(2479559-2479662)
chr7 (208-313)||(23402784-23402887)
chr7 (31-108)||(24260929-24261006)
chr7 (21-141)||(18389126-18389246)
chr7 (43-142)||(12397287-12397385)
chr7 (14-108)||(16880475-16880569)
chr7 (14-108)||(16885330-16885424)
chr7 (208-313)||(20284312-20284415)
chr7 (211-313)||(21989131-21989231)
chr7 (5-87)||(25767381-25767463)
chr7 (208-313)||(44847896-44847999)
chr7 (208-372)||(47263833-47263992)
chr7 (206-313)||(2580613-2580717)
chr7 (206-313)||(2647466-2647571)
chr7 (211-313)||(4796443-4796542)
chr7 (208-313)||(3047477-3047581)
chr7 (206-313)||(9189775-9189881)
chr7 (206-313)||(9184943-9185048)
chr7 (208-313)||(33332221-33332324)
chr7 (208-307)||(49091918-49092015)
chr7 (126-169)||(12406591-12406634)
chr7 (5-126)||(2479757-2479877)
chr7 (202-313)||(29160028-29160140)
chr7 (204-313)||(5817036-5817144)
chr7 (208-282)||(79640-79714)
chr7 (126-165)||(24024042-24024081)
chr7 (8-87)||(47264102-47264181)
chr7 (263-306)||(21812099-21812143)
[»] chr8 (45 HSPs)
chr8 (2-375)||(33037366-33037738)
chr8 (1-375)||(18852705-18853098)
chr8 (2-375)||(4759613-4760006)
chr8 (1-375)||(30655812-30656204)
chr8 (8-375)||(18870106-18870492)
chr8 (1-375)||(10688677-10689073)
chr8 (2-375)||(36979543-36979935)
chr8 (1-363)||(6311476-6311857)
chr8 (5-375)||(1261497-1261886)
chr8 (10-307)||(7289515-7289831)
chr8 (202-375)||(26288055-26288226)
chr8 (202-375)||(26301312-26301483)
chr8 (202-375)||(26313306-26313477)
chr8 (1-108)||(10683817-10683924)
chr8 (3-141)||(25689621-25689759)
chr8 (9-118)||(25327750-25327858)
chr8 (3-141)||(3439168-3439305)
chr8 (247-375)||(31071035-31071161)
chr8 (2-108)||(39784403-39784510)
chr8 (30-186)||(15290250-15290406)
chr8 (30-186)||(15470619-15470775)
chr8 (30-141)||(42575690-42575802)
chr8 (208-313)||(7412563-7412666)
chr8 (5-115)||(26288324-26288434)
chr8 (5-115)||(26301581-26301691)
chr8 (5-115)||(26313575-26313685)
chr8 (31-108)||(35745793-35745870)
chr8 (208-372)||(4456195-4456354)
chr8 (126-307)||(25327887-25328058)
chr8 (211-361)||(19175528-19175674)
chr8 (208-313)||(4696379-4696482)
chr8 (208-313)||(5702251-5702354)
chr8 (7-107)||(2627403-2627503)
chr8 (228-307)||(25328105-25328184)
chr8 (208-309)||(23799347-23799446)
chr8 (126-306)||(39784548-39784728)
chr8 (206-313)||(19752163-19752268)
chr8 (5-87)||(7412787-7412869)
chr8 (208-313)||(3051343-3051447)
chr8 (208-313)||(28307785-28307889)
chr8 (52-115)||(31043017-31043080)
chr8 (248-313)||(9054231-9054294)
chr8 (244-313)||(26403034-26403103)
chr8 (3-45)||(31042989-31043031)
chr8 (204-307)||(9765617-9765720)
[»] chr1 (60 HSPs)
chr1 (2-375)||(24786904-24787295)
chr1 (5-375)||(19360995-19361364)
chr1 (126-375)||(24202455-24202701)
chr1 (5-375)||(19365851-19366240)
chr1 (2-140)||(24793726-24793864)
chr1 (127-375)||(19358530-19358775)
chr1 (3-142)||(20622601-20622740)
chr1 (5-108)||(41398656-41398759)
chr1 (2-108)||(1054592-1054699)
chr1 (5-108)||(41391001-41391104)
chr1 (5-185)||(51765073-51765254)
chr1 (187-307)||(41398415-41398536)
chr1 (2-141)||(44203296-44203436)
chr1 (2-108)||(44023455-44023562)
chr1 (187-307)||(41390760-41390881)
chr1 (16-108)||(25439492-25439584)
chr1 (16-108)||(39445897-39445989)
chr1 (208-372)||(13604393-13604552)
chr1 (3-117)||(40282039-40282154)
chr1 (3-141)||(9036083-9036221)
chr1 (3-117)||(9986866-9986980)
chr1 (16-108)||(25444685-25444777)
chr1 (206-313)||(47098594-47098699)
chr1 (206-313)||(47102608-47102713)
chr1 (16-108)||(43988042-43988134)
chr1 (3-115)||(21053620-21053733)
chr1 (206-313)||(27104171-27104275)
chr1 (210-313)||(29652036-29652137)
chr1 (211-361)||(3281884-3282030)
chr1 (211-361)||(21536344-21536490)
chr1 (208-362)||(37069943-37070093)
chr1 (206-313)||(32889661-32889766)
chr1 (52-140)||(24202360-24202450)
chr1 (208-313)||(13598623-13598726)
chr1 (285-375)||(19379916-19380004)
chr1 (206-313)||(9476485-9476590)
chr1 (208-361)||(26644669-26644818)
chr1 (126-306)||(1054737-1054917)
chr1 (204-313)||(40816580-40816690)
chr1 (204-313)||(47703699-47703809)
chr1 (126-179)||(41390910-41390963)
chr1 (126-179)||(41398565-41398618)
chr1 (210-310)||(22819657-22819756)
chr1 (209-313)||(19073151-19073256)
chr1 (209-313)||(19121041-19121146)
chr1 (126-306)||(39445679-39445859)
chr1 (8-142)||(13604181-13604316)
chr1 (126-179)||(25439622-25439675)
chr1 (126-179)||(25444815-25444868)
chr1 (126-179)||(44023600-44023653)
chr1 (143-178)||(24793886-24793921)
chr1 (263-306)||(25439758-25439801)
chr1 (263-306)||(25444951-25444994)
chr1 (263-306)||(44023736-44023779)
chr1 (10-67)||(26644461-26644518)
chr1 (18-67)||(28220673-28220722)
chr1 (18-67)||(28223868-28223917)
chr1 (11-67)||(3156533-3156589)
chr1 (270-313)||(16124347-16124388)
chr1 (5-45)||(24202334-24202374)
[»] chr6 (57 HSPs)
chr6 (5-375)||(5674312-5674700)
chr6 (2-177)||(5266418-5266593)
chr6 (6-307)||(22010272-22010602)
chr6 (6-307)||(11857154-11857484)
chr6 (126-307)||(14737289-14737482)
chr6 (126-307)||(14742149-14742342)
chr6 (6-118)||(14737149-14737260)
chr6 (3-186)||(27647548-27647729)
chr6 (3-142)||(16578882-16579021)
chr6 (3-142)||(16616359-16616498)
chr6 (8-118)||(14742011-14742120)
chr6 (2-90)||(30125097-30125185)
chr6 (126-375)||(22709173-22709420)
chr6 (5-186)||(2171839-2172021)
chr6 (3-142)||(16554534-16554673)
chr6 (3-142)||(16631090-16631229)
chr6 (30-141)||(33342469-33342581)
chr6 (30-141)||(34166773-34166885)
chr6 (3-117)||(411766-411881)
chr6 (30-141)||(6026941-6027052)
chr6 (2-108)||(6438898-6439005)
chr6 (31-137)||(6136333-6136439)
chr6 (5-115)||(22709452-22709562)
chr6 (16-117)||(16839137-16839237)
chr6 (16-108)||(6005821-6005913)
chr6 (30-141)||(13150956-13151068)
chr6 (16-108)||(28155164-28155256)
chr6 (16-108)||(33330026-33330118)
chr6 (16-108)||(33335523-33335615)
chr6 (30-141)||(34164551-34164663)
chr6 (3-142)||(16652777-16652916)
chr6 (30-141)||(25420904-25421015)
chr6 (31-108)||(5343879-5343956)
chr6 (5-117)||(3073148-3073260)
chr6 (208-372)||(5757249-5757408)
chr6 (52-186)||(6097742-6097877)
chr6 (206-313)||(31936798-31936903)
chr6 (52-141)||(25421020-25421109)
chr6 (206-313)||(5572012-5572117)
chr6 (206-313)||(31979735-31979840)
chr6 (212-313)||(5017271-5017370)
chr6 (208-313)||(31086245-31086348)
chr6 (208-313)||(24435743-24435845)
chr6 (126-306)||(28155294-28155475)
chr6 (210-313)||(22963922-22964023)
chr6 (210-313)||(23824370-23824471)
chr6 (208-263)||(10076962-10077017)
chr6 (208-283)||(18234334-18234409)
chr6 (126-306)||(6438680-6438860)
chr6 (204-313)||(21801108-21801218)
chr6 (8-87)||(5757037-5757116)
chr6 (211-286)||(21272763-21272838)
chr6 (8-87)||(23896792-23896871)
chr6 (245-307)||(28184684-28184749)
chr6 (253-372)||(21356204-21356318)
chr6 (208-258)||(23896628-23896678)
chr6 (126-179)||(16839054-16839107)
[»] chr5 (66 HSPs)
chr5 (5-371)||(24136017-24136401)
chr5 (1-375)||(31180379-31180771)
chr5 (1-307)||(27449994-27450331)
chr5 (1-307)||(27445150-27445488)
chr5 (126-375)||(35387827-35388074)
chr5 (6-307)||(43592459-43592789)
chr5 (6-307)||(43598904-43599234)
chr5 (6-307)||(43604396-43604726)
chr5 (6-307)||(43609888-43610218)
chr5 (217-375)||(30631572-30631730)
chr5 (126-375)||(38219563-38219805)
chr5 (3-186)||(22536591-22536772)
chr5 (1-138)||(1456716-1456852)
chr5 (126-307)||(15044865-15045057)
chr5 (191-307)||(1456952-1457067)
chr5 (5-108)||(15045095-15045198)
chr5 (52-142)||(29751525-29751615)
chr5 (2-108)||(30631763-30631869)
chr5 (10-101)||(29402637-29402728)
chr5 (30-141)||(25077813-25077924)
chr5 (30-141)||(25135782-25135893)
chr5 (5-139)||(26177549-26177685)
chr5 (3-142)||(10592923-10593062)
chr5 (3-117)||(29720046-29720161)
chr5 (208-372)||(15464700-15464860)
chr5 (208-372)||(36932119-36932279)
chr5 (16-108)||(2785777-2785869)
chr5 (5-142)||(16407724-16407863)
chr5 (2-141)||(16546294-16546434)
chr5 (16-108)||(33768586-33768678)
chr5 (16-108)||(33791718-33791810)
chr5 (2-141)||(40379756-40379896)
chr5 (2-141)||(40381967-40382107)
chr5 (5-139)||(26170440-26170576)
chr5 (206-313)||(24553296-24553401)
chr5 (16-108)||(28807169-28807261)
chr5 (5-142)||(38219808-38219947)
chr5 (208-362)||(9353103-9353253)
chr5 (5-107)||(9789624-9789726)
chr5 (208-373)||(14520396-14520556)
chr5 (5-107)||(18442048-18442150)
chr5 (2-141)||(16544072-16544212)
chr5 (206-313)||(28832480-28832585)
chr5 (30-106)||(37561054-37561130)
chr5 (8-142)||(16409163-16409299)
chr5 (211-313)||(11916746-11916846)
chr5 (208-312)||(11181603-11181705)
chr5 (206-313)||(31300364-31300469)
chr5 (16-108)||(31396583-31396675)
chr5 (16-108)||(31401440-31401532)
chr5 (30-106)||(37556232-37556308)
chr5 (208-313)||(17003730-17003833)
chr5 (52-117)||(35388104-35388169)
chr5 (211-313)||(12083951-12084051)
chr5 (3-101)||(29722233-29722332)
chr5 (206-313)||(42127139-42127244)
chr5 (5-87)||(9352890-9352972)
chr5 (126-179)||(1456861-1456914)
chr5 (204-313)||(10281975-10282085)
chr5 (222-305)||(7160689-7160770)
chr5 (263-306)||(28807436-28807479)
chr5 (244-313)||(19588968-19589035)
chr5 (126-179)||(37561170-37561223)
chr5 (5-45)||(29752267-29752307)
chr5 (126-179)||(37556348-37556401)
chr5 (5-45)||(15465002-15465042)
[»] scaffold0188 (2 HSPs)
scaffold0188 (5-375)||(17514-17884)
scaffold0188 (190-375)||(23794-23977)
[»] scaffold0135 (1 HSPs)
scaffold0135 (17-307)||(34648-34967)
[»] scaffold0286 (1 HSPs)
scaffold0286 (2-186)||(22019-22204)
[»] scaffold0140 (1 HSPs)
scaffold0140 (208-372)||(8188-8348)
[»] scaffold0665 (1 HSPs)
scaffold0665 (6-118)||(8098-8209)
[»] scaffold0355 (3 HSPs)
scaffold0355 (6-108)||(3420-3522)
scaffold0355 (126-307)||(3560-3754)
scaffold0355 (272-307)||(9514-9549)
[»] scaffold0491 (2 HSPs)
scaffold0491 (5-194)||(9036-9225)
scaffold0491 (5-140)||(11534-11670)
[»] scaffold0674 (1 HSPs)
scaffold0674 (2-137)||(4096-4232)
[»] scaffold0565 (1 HSPs)
scaffold0565 (30-141)||(2967-3078)
[»] scaffold0464 (2 HSPs)
scaffold0464 (2-108)||(760-867)
scaffold0464 (126-306)||(542-722)
[»] scaffold0087 (4 HSPs)
scaffold0087 (208-372)||(36603-36762)
scaffold0087 (208-372)||(43732-43891)
scaffold0087 (8-63)||(36391-36446)
scaffold0087 (8-87)||(43520-43599)
[»] scaffold0006 (4 HSPs)
scaffold0006 (208-372)||(133050-133209)
scaffold0006 (208-313)||(5908-6011)
scaffold0006 (208-313)||(2717-2819)
scaffold0006 (8-142)||(132838-132973)
[»] scaffold0197 (2 HSPs)
scaffold0197 (16-108)||(13877-13969)
scaffold0197 (16-109)||(18757-18850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (16-108)||(176543-176635)
[»] scaffold0259 (2 HSPs)
scaffold0259 (16-117)||(1832-1932)
scaffold0259 (126-179)||(1962-2015)
[»] scaffold0028 (2 HSPs)
scaffold0028 (16-117)||(148537-148637)
scaffold0028 (126-179)||(148667-148720)
[»] scaffold0137 (1 HSPs)
scaffold0137 (2-141)||(5937-6078)
[»] scaffold1519 (2 HSPs)
scaffold1519 (5-115)||(565-675)
scaffold1519 (126-223)||(707-806)
[»] scaffold0036 (1 HSPs)
scaffold0036 (211-313)||(85906-86006)
[»] scaffold0098 (2 HSPs)
scaffold0098 (208-362)||(45374-45525)
scaffold0098 (8-142)||(45602-45737)
[»] scaffold0176 (1 HSPs)
scaffold0176 (208-313)||(17474-17577)
[»] scaffold0148 (1 HSPs)
scaffold0148 (204-313)||(10954-11064)
[»] scaffold0510 (1 HSPs)
scaffold0510 (8-87)||(1169-1248)
[»] scaffold0078 (1 HSPs)
scaffold0078 (208-313)||(23755-23859)


Alignment Details
Target: chr3 (Bit Score: 347; Significance: 0; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 2671143 - 2671517
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2671143 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataagg 2671242  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgta 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||| |    
T  2671243 actggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttgtgaaagagcttgga 2671342  T
Q  201 ggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 300  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2671343 agagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 2671442  T
Q  301 cttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2671443 cttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 2671517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 2 - 375
Target Start/End: Original strand, 40372335 - 40372727
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40372335 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 40372434  T
Q  102 ctggtcataccttgggttgtacgca-------------------aatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcaga 182  Q
    |||||||||||| ||   | |||||                   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  40372435 ctggtcatacctgggaacggacgcaaatcgtgccacgatctggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcaga 40372534  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40372535 tttgtaagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 40372634  T
Q  283 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  40372635 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 40372727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 7167804 - 7167410
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  7167804 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagg 7167705  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    ||||||||||||||||||   |||||||||||||||||||||                   |||||||||||||||||||||||||||||| ||||||||    
T  7167704 actggtcataccttgggtcagacgcaaatcgtgacacgatttgaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcag 7167605  T
Q  182 atttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
    |||||  | |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7167604 atttgggatagagcttggaagagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttg 7167505  T
Q  282 gga-aaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7167504 ggaaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 7167410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 2 - 375
Target Start/End: Complemental strand, 8477923 - 8477530
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8477923 aggtgccgtgagctagtttgctggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataagga 8477824  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtg--ca 180  Q
    ||||||||||||||||||||||||||||||||||||||| |                   |||||||||||| ||||||| ||  ||||| |||||  ||    
T  8477823 ctggtcataccttgggttgtacgcaaatcgtgacacgatctggaaatcgtgacacgattgcttcagaggaaggctagtatttaa-gtgttcttgtgttca 8477725  T
Q  181 gatttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 280  Q
      |||| ||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8477724 tttttggaagagagcttggaagagcttagagagagaaacttggattacagaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 8477625  T
Q  281 gggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8477624 gggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 8477530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 9090839 - 9091232
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9090839 aaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 9090938  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgaca-------------------cgatttcttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    ||||||||||||||||   | |||||||||||||||                   ||||| |||||||||||| ||||||||||||||||| ||||||      
T  9090939 actggtcataccttggaacggacgcaaatcgtgacatgatctggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgctt 9091038  T
Q  182 atttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
     |||| | ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9091039 ttttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttgggttg 9091138  T
Q  282 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  9091139 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttctagggttcatatt 9091232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 8738601 - 8738994
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8738601 aaggtgccgtgagctagtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 8738700  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgaca-------------------cgatttcttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    ||||||||||||||||   | |||||||||||||||                   ||||| |||||||||||| ||||||||||||||||| ||||||      
T  8738701 actggtcataccttggaacggacgcaaatcgtgacatgatctggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgctt 8738800  T
Q  182 atttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
     |||| | ||||||||| | ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  8738801 ttttgaaggagagcttggaagagcttagagagagaaacttggattgcaaaggagggaaccaatgggttgagtgtctttgtagagagtatctcttgggttg 8738900  T
Q  282 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||    
T  8738901 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgaaaggatctaaagcttcctctagtgtcttctcttctagggttcatatt 8738994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 28503397 - 28503795
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  28503397 aaggggccgtgagctagtttgctggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataagg 28503496  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt---------------------cttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||| |||| |||||||||   ||||||||||||||||||| |                     |||||||||||||||||||||||||||||| ||||||    
T  28503497 acttgtca-accttgggtcagacgcaaatcgtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 28503595  T
Q  180 agatttgtaagagagcttgtaggagcttagagagaga---aacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctctt 275  Q
       |||| | ||||||||| | |||||||||||||||   ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  28503596 ttttttgaaggagagcttggaagagcttagagagagagagaacttggataacaaaggagggaaccaaaagggttgagtgtctttgttgagagtgtctctt 28503695  T
Q  276 gggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  28503696 gggttgggaaaaatattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcatatt 28503795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 28501230 - 28501628
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28501230 aaggggccgtgagctagtttgcaggacaccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataagg 28501329  T
Q  101 actggtcataccttgggttgtacgcaa---------------------atcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||| |||| |||||||||   ||||||                     |||||| ||||||| |||||||||||||||||||||||||||||  ||||||    
T  28501330 acttgtca-accttgggtcagacgcaaatcatgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgc 28501428  T
Q  180 agatttgtaagagagcttgtaggagcttagagagaga---aacttggattacaaaggagggaacc-aaagggttgagtgtctttgtagagagtgtctctt 275  Q
       |||| | ||||||||| | |||||||||||||||   ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||    
T  28501429 ttttttgaaggagagcttggaagagcttagagagagagagaacttggataacaaaggagggaaccaaaagggatgagtgtctttgttgagagtgtctctt 28501528  T
Q  276 gggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  28501529 gggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgacttctcttttagggttcatatt 28501628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 126 - 375
Target Start/End: Complemental strand, 1306360 - 1306113
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt-gtaagagagcttgtaggagcttagagagagaaacttgga 224  Q
    |||||||||||||||||  |||| ||||||||||||| ||  ||||| |||||||| ||| | | ||||||||| | |||||||||||||||||||||||    
T  1306360 aaatcgtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagtttttggaggagagcttggaagagcttagagagagaaacttgga 1306262  T
Q  225 ttacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattag 324  Q
    ||| ||||||||||||   || ||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||| || ||||  |     
T  1306261 ttataaaggagggaactctagagttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtga-gatttcacca- 1306164  T
Q  325 ttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  1306163 ttggaaggatcttaagcttcctcttgtgtcttctcttttagggttcatatt 1306113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 27352159 - 27352300
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||    
T  27352159 aaggtgccgtgagcttgtttgcagaacaccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataagg 27352258  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    |||||||||||||||||  | |||||||||||||||||||||    
T  27352259 actggtcataccttgggacggacgcaaatcgtgacacgattt 27352300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 375
Target Start/End: Original strand, 27986021 - 27986379
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||  || | |||||||||||||||   ||||||||| ||||||| | |  |||||||  ||    
T  27986021 tgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggt-tg 27986119  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtagg 202  Q
    ||| || ||||||| ||||| |  ||||||||||||||||  || |  ||||||  |||| ||  ||||| ||||||||||||| ||||||| |    ||    
T  27986120 gtcgtatcttgggtcgtacgtatcaatcgtgacacgattttgtccgcagaagacaggtatttaa-gtgttcttgtgcagatttggaagagagtt----gg 27986214  T
Q  203 agcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacct 302  Q
    |    |||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||    
T  27986215 a----agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacacct 27986308  T
Q  303 tgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||| || ||||  | ||||||||||  |||||||||| | |||||||||||||||||||| |||||    
T  27986309 tgggtagtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggttgatatt 27986379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 5 - 375
Target Start/End: Original strand, 26928163 - 26928522
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||| |||||| | |||||||||||||||   ||||||||||||||||| | |  ||||||||| |    
T  26928163 tgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaggataaggacag 26928262  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt-gtaagagagcttgtag 201  Q
    ||| ||||||| |   |||| |  ||||||||||||||||  ||||  ||||||| |||| ||  ||||| |||||||||||| | | ||||| |         
T  26928263 gtcgtaccttgtgacttacgtatcaatcgtgacacgattttatcagttgaagacttgtatttaa-gtgttcttgtgcagattttggaggagagtt----- 26928356  T
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    ||    ||||||| |||||||||||||||| ||||||||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||    
T  26928357 ga----agagagaaaaacttggattacaaacgagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacacc 26928450  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||| ||| || ||||  | ||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  26928451 ttgggtaatga-gatttcacca-ttggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcatatt 26928522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 2 - 142
Target Start/End: Original strand, 22172741 - 22172880
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  22172741 aggtgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataagga 22172840  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||||| ||||||| |     |||||||||||||||||||    
T  22172841 ctggtca-accttggttccgttgcaaatcgtgacacgattt 22172880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 54634790 - 54634928
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||  ||||||| ||| |||||||||||||||  |||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  54634790 ggtgccgtgagctaagttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 54634889  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||| |  ||||||| ||||||||||| ||||||||||    
T  54634890 tggtcttttcttgggtggtacgcaaatcatgacacgatt 54634928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 22172985 - 22173100
Alignment:
Q  191 agagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaca 290  Q
    |||||||||| ||||||||| |||||| |||||||  ||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  22172985 agagcttgtatgagcttagaaagagaa-cttggatagcaaagtagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca 22173083  T
Q  291 ttgtaatcaccttgggt 307  Q
    |||||||||||||||||    
T  22173084 ttgtaatcaccttgggt 22173100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 208 - 375
Target Start/End: Complemental strand, 32143649 - 32143486
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||| |||||||||||||||||||||   |||||||||||||||||||| ||   |||||||||||||  |||||||||||| ||||||||||    
T  32143649 agagagagaaatttggattacaaaggagggaactctagggttgagtgtctttgtagtgatgatctcttgggttgg--aaaacattgtaaacaccttgggt 32143552  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||| || ||||  | ||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  32143551 agtga-gatttcacca-ttggaaggatcaaaagcttcctcttgtgtcttctcttttagggttcatatt 32143486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 6716165 - 6716304
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| |||||||| ||||||  |||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  6716165 ggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 6716264  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||||||| ||||||  |||||||||||||||    
T  6716265 tggtcgtttcttgggtggtacgcggatcgtgacacgattt 6716304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 6718349 - 6718488
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| |||||||| ||||||  |||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  6718349 ggtgccgtgagctaggttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 6718448  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||||||| ||||||  |||||||||||||||    
T  6718449 tggtcgtttcttgggtggtacgcggatcgtgacacgattt 6718488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 18656949 - 18656843
Alignment:
Q  3 ggtgccgtga-gctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    |||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  18656949 ggtgccgtgaagcaagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataagga 18656850  T
Q  102 ctggtca 108  Q
    |||||||    
T  18656849 ctggtca 18656843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 45282646 - 45282784
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||    
T  45282646 ggtgccgtgagctaggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 45282745  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||| |  ||||||| ||||||| ||||||||||||||    
T  45282746 tggtcgtttcttgggtggtacgcagatcgtgacacgatt 45282784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 10208885 - 10209041
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    |||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||| ||||||||||||||||||||| | |||||||  | |||||||    
T  10208885 caaatcgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtcgttccttgggacggacgcaaa 10208984  T
Q  129 tcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    |||||||||||||    ||||||||||||||||  ||  ||||| |||||||||||||    
T  10208985 tcgtgacacgattggaacagaggaagactagtactta-agtgttcttgtgcagatttg 10209041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 33386435 - 33386595
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||| ||||   |||||||||||||||||||| |||  |||||||||||  || ||||||||||| ||||||||||    
T  33386435 agagagagaaacttggattacaaaggagagaactttagggttgagtgtctttgtagtgaggatctcttgggtt--gagaaacattgtaaacaccttgggt 33386532  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||||||||||||||||    
T  33386533 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggttcat 33386595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 4599000 - 4598888
Alignment:
Q  30 caaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    |||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  4599000 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 4598901  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  4598900 tcgtgacacgatt 4598888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 4601221 - 4601109
Alignment:
Q  30 caaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    |||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  4601221 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 4601122  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  4601121 tcgtgacacgatt 4601109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 10058134 - 10058246
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||    
T  10058134 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaa 10058233  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  10058234 tcgtgacacgatt 10058246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 10060356 - 10060468
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||    
T  10060356 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaa 10060455  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  10060456 tcgtgacacgatt 10060468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 10062578 - 10062690
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||    
T  10062578 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaa 10062677  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  10062678 tcgtgacacgatt 10062690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 10064800 - 10064912
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||    
T  10064800 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaa 10064899  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  10064900 tcgtgacacgatt 10064912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 25637120 - 25637231
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    ||||||||||||||||  |||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  25637120 caaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 25637219  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  25637220 cgtgacacgatt 25637231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 375
Target Start/End: Complemental strand, 27453284 - 27453123
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||  ||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  27453284 agagagagaaacttggattacaaaggagggaactttagggttgagtgtc--tgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 27453189  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||| || ||||  | ||||||||||  |||||||||| | ||||||||||||||||||||||||||    
T  27453188 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggttcatatt 27453123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 1306523 - 1306411
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    |||| |||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| |||  |||||||||    
T  1306523 ggtgtcgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggac 1306424  T
Q  103 tggtcataccttg 115  Q
     |||| |||||||    
T  1306423 aggtcgtaccttg 1306411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 8512734 - 8512642
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  8512734 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 8512642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 8517614 - 8517522
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  8517614 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 8517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 10055912 - 10056024
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  10055912 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 10056011  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  10056012 tcgtgacacgatt 10056024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 10067022 - 10067134
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  10067022 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 10067121  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  10067122 tcgtgacacgatt 10067134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 10211085 - 10211197
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    |||||||||||||||| |||||||| || |||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  10211085 caaatcgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 10211184  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  10211185 tcgtgacacgatt 10211197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 27974712 - 27974871
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||| |||  ||||||||||| ||||||||||    
T  27974712 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggtcggg--aaacattgtaaacaccttgggt 27974809  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||| ||||||||||||    
T  27974810 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 27974871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 2672512 - 2672604
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  2672512 agtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 2672604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 24968611 - 24968519
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  24968611 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca 24968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 32475963 - 32475885
Alignment:
Q  31 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcat 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  32475963 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32475885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 32480821 - 32480743
Alignment:
Q  31 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcat 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  32480821 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32480743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 40592542 - 40592645
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  40592542 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40592639  T
Q  308 agtgag 313  Q
    ||||||    
T  40592640 agtgag 40592645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 2676668 - 2676760
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||||||||||    
T  2676668 agtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtca 2676760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 32143864 - 32143725
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||   ||||||||||||||||| | |  ||||||||| |    
T  32143864 tgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaagataaggacag 32143765  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgattt 142  Q
    ||| ||||||| |  ||||| |  ||||||||||||||||    
T  32143764 gtcgtaccttgtgacgtacgtatcaatcgtgacacgattt 32143725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 1736064 - 1736167
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||| ||||||||||  ||||||||||| ||||||||||    
T  1736064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttggg--aaacattgtaaacaccttgggt 1736161  T
Q  308 agtgag 313  Q
    ||||||    
T  1736162 agtgag 1736167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 8370249 - 8370352
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| || |||||||    
T  8370249 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacatcttgggt 8370346  T
Q  308 agtgag 313  Q
    ||||||    
T  8370347 agtgag 8370352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 212 - 361
Target Start/End: Complemental strand, 16264671 - 16264526
Alignment:
Q  212 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtg 311  Q
    ||||||||||||||||||||||||| |||   |||||||||||||||||||  |||  ||||||||||||||  ||||||||||| ||||||||||||||    
T  16264671 agagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttggg--aaacattgtaaacaccttgggtagtg 16264574  T
Q  312 aggagttcattagttggaaggatttaaagcttcctctagtgtcttctctt 361  Q
    | || ||||  | ||||||||||  |||||||||| | ||||||||||||    
T  16264573 a-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctt 16264526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 21711548 - 21711445
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||| ||    
T  21711548 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgagt 21711451  T
Q  308 agtgag 313  Q
    ||||||    
T  21711450 agtgag 21711445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 361
Target Start/End: Original strand, 39032315 - 39032463
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  39032315 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgag-atctcttgggttgg--taaacattgtaaacaccttgggt 39032411  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctctt 361  Q
    ||||| || ||||  | ||||||||||  |||||||||| | ||||||||||||    
T  39032412 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctt 39032463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 47923664 - 47923767
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   ||| |||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47923664 agagagagaaacttggattacaaaggaggtaactttaggattgagtgtctttgtagtgagaatctcttgggttggg--aaacattgtaaacaccttgggt 47923761  T
Q  308 agtgag 313  Q
    ||||||    
T  47923762 agtgag 47923767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 6794473 - 6794578
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   ||||||||||||| |||||| |||  ||||||| ||||||  ||||||||||| ||||||||    
T  6794473 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtcattgtagtgaggttctcttgagttggg--aaacattgtaaacaccttgg 6794570  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  6794571 gtagtgag 6794578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 23198447 - 23198308
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||| | | | |||||||||||||||   ||||||||||||||||| |||  |||||||||||    
T  23198447 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactg 23198348  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgattt 142  Q
    ||| ||||||| |  |||||  | ||||||||||||||||    
T  23198347 gtcgtaccttgtgacgtacgtaccaatcgtgacacgattt 23198308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 26299316 - 26299211
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||||||||||||||||||||| |||||||| |||   |||||||| ||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||    
T  26299316 ttagagagagaaacttggattataaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 26299219  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  26299218 gtagtgag 26299211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 3617141 - 3617252
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    ||||||||| |||||| | || |||||||||||||||   ||||||||||||||||||||||||||||| | |||||| | |||||||  | ||||||||    
T  3617141 caaatcgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacggacgcaaat 3617240  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  3617241 cgtgacacgatt 3617252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 800768 - 800870
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| |||||| || |||||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||||| ||| ||||||||| ||    
T  800768 tgccgtgagctggtttgcggggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatg 800867  T
Q  105 gtc 107  Q
    |||    
T  800868 gtc 800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 24694926 - 24695029
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||| ||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  24694926 agagagagaaatttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 24695023  T
Q  308 agtgag 313  Q
     |||||    
T  24695024 ggtgag 24695029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 36029415 - 36029316
Alignment:
Q  212 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtg 311  Q
    ||||||||||||||||||||||||| ||    |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||||||    
T  36029415 agagaaacttggattacaaaggaggtaaatttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagtg 36029318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 3323449 - 3323554
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||| |||||| |||||||||||||| |||   |||||||||||||||| ||| |||  ||||||||||||||  ||||||||||| ||||||||    
T  3323449 ttagagagacaaacttcgattacaaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 3323546  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  3323547 gtagtgag 3323554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 3328115 - 3328220
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||||||||||||||||||||| |||||||  |||   |||||||| ||||||||||| |||  |||||||||||||  |||||||||||| ||||||||    
T  3328115 ttagagagagaaacttggattagaaaggagataactttagggttgaatgtctttgtagtgagcttctcttgggttgg--aaaacattgtaaacaccttgg 3328212  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  3328213 gtagtgag 3328220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 205 - 313
Target Start/End: Original strand, 4386733 - 4386840
Alignment:
Q  205 cttagagagagaaacttggat-tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacctt 303  Q
    |||||||||||||||||| |  ||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||||||||||    
T  4386733 cttagagagagaaacttgaaaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaatcacctt 4386830  T
Q  304 gggtagtgag 313  Q
    | ||||||||    
T  4386831 gagtagtgag 4386840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 23200642 - 23200536
Alignment:
Q  9 gtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||||||||| |||||||||||| |||||| | | | |||||||||||||||   ||||||||||||||||| |||  ||||||||||||||     
T  23200642 gtgagctggtttgcagggtgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcg 23200543  T
Q  109 taccttg 115  Q
    |||||||    
T  23200542 taccttg 23200536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 37726001 - 37725898
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||| |||  ||||||| ||| |||||||| |    
T  37726001 agagagagaaacttggattacaaaggaggaaactttagggttgagtgtctttgtagtgaggatctcttgggtgggg--aaacattataaacaccttggat 37725904  T
Q  308 agtgag 313  Q
    ||||||    
T  37725903 agtgag 37725898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 48438539 - 48438439
Alignment:
Q  210 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtag 309  Q
    ||||||||||||||||||||||||||| |||   ||||||||||||||||||||  ||  |||||| |||||||  ||||||||||| ||||||||||||    
T  48438539 agagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtaaggatctctt-ggttggg--aaacattgtaaacaccttgggtag 48438443  T
Q  310 tgag 313  Q
    ||||    
T  48438442 tgag 48438439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 27027032 - 27026929
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||| ||||||||||||||||||||| |||   |||||||||||||||||||  |||  |||||||| | |||  ||||||||||| ||||||||||    
T  27027032 agagagaaaaacttggattacaaaggaggtaactttagggttgagtgtctttgtactgaggatctcttggataggg--aaacattgtaaacaccttgggt 27026935  T
Q  308 agtgag 313  Q
    ||||||    
T  27026934 agtgag 27026929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 22172904 - 22172957
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  22172904 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 22172957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 1417249 - 1417354
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||| ||||||| ||||||||||||| |||   |||||||||||||||||||| |||  | ||||||||||||  ||||||||||| ||| || |    
T  1417249 ttagagagaaaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttatcttgggttggg--aaacattgtaaacactttag 1417346  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  1417347 gtagtgag 1417354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 8126958 - 8126853
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||| | | |||   |  ||||||||||||||||| |||  | |||||||||||||||  |||||||| ||||||||    
T  8126958 ttagagagagaaacttggattacaaagaaagtaactttacagttgagtgtctttgtagtgaggttttcttgggttgggaaa--cattgtaaacaccttgg 8126861  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  8126860 gtagtgag 8126853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 33386220 - 33386358
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||| ||| | |||||||||||||||   ||||||||| ||||||| | |  |||||||  ||    
T  33386220 tgccgtgagctggtttgcagggtgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttg 33386318  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgattt 142  Q
    ||| || ||||||| ||||| |  ||||||||||||||||    
T  33386319 gtcgtatcttgggtcgtacgtatcaatcgtgacacgattt 33386358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 37466623 - 37466518
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   || | ||||||||||||||| |||  |||||| |||||||  ||||||||||| ||| ||||    
T  37466623 ttagagagagaaacttggattacaaaggaggtaactttagagctgagtgtctttgtagtgaggttctcttaggttggg--aaacattgtaaacactttgg 37466526  T
Q  306 gtagtgag 313  Q
    || |||||    
T  37466525 gttgtgag 37466518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 211 - 313
Target Start/End: Original strand, 25929159 - 25929258
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    ||||||||||| |||||||||||||| |||   |||||||||||||||||||| |||  ||||||| |||||  |||||||||||| || ||||||||||    
T  25929159 gagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagttgg--aaaacattgtaaaca-cttgggtagt 25929255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 304
Target Start/End: Complemental strand, 23410624 - 23410529
Alignment:
Q  208 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttg 304  Q
    |||||||||||||||| ||| |||||||| ||||   |||||||||||||||||||| |||  |||||||||||||  |||||||||||| |||||||    
T  23410624 agagagagaaacttgggattgcaaaggagagaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 27038377 - 27038274
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||| ||||||||||||||||||||  |||   ||||||||||| |||||||| |||  |||||||||| |||  ||||||||||| ||||||||||    
T  27038377 agagagaaaaacttggattacaaaggagataactttagggttgagtgcctttgtagtgaggatctcttgggtaggg--aaacattgtaaacaccttgggt 27038280  T
Q  308 agtgag 313  Q
     |||||    
T  27038279 ggtgag 27038274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 35925803 - 35925701
Alignment:
Q  211 gagagaaacttggattacaaaggag--ggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggta 308  Q
    |||||||||||||||||||||||||  | |||   |||||||| ||||||||||| |||  ||| |||||||||||||  |||||||| |||||||||||    
T  35925803 gagagaaacttggattacaaaggagatgtaactttagggttgaatgtctttgtagtgaggatcttttgggttgggaaa--cattgtaaacaccttgggta 35925706  T
Q  309 gtgag 313  Q
    |||||    
T  35925705 gtgag 35925701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 3715753 - 3715865
Alignment:
Q  202 gagcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatc 298  Q
    |||||| |||||||||||||| || ||||||||||| |||   |||||||| ||||||||||| |||  |||||||  ||||||||||  |||||||| |    
T  3715753 gagctttgagagagaaacttgagaatacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaac 3715850  T
Q  299 accttgggtagtgag 313  Q
    |||||||||||||||    
T  3715851 accttgggtagtgag 3715865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 25796113 - 25796003
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttgggaaaaacattgtaatcac 300  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||  ||||||||  ||||| ||||| |||    
T  25796113 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggctctcttgagggttggg--aaacaatgtaaacac 25796016  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  25796015 cttgggtagtgag 25796003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 40844977 - 40844878
Alignment:
Q  212 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtg 311  Q
    |||||||||| |||||||||||||| |||   |||||||||||||||||||| |||  ||| |||||||  || ||||||||||| ||||||| ||| ||    
T  40844977 agagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggtt--gagaaacattgtaaacaccttgagtaatg 40844880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 7782603 - 7782538
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggg 117  Q
    ||||||||||||||||   ||||||||||||||||| ||| ||||||||||||||| | |||||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttggg 7782538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 23392204 - 23392106
Alignment:
Q  208 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||||||||||| | | |||||||| |||    |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||    
T  23392204 agagagagaaacttgggactgcaaaggagagaaatttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttggg 23392107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 37726216 - 37726078
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| || ||||||||| |||||| ||| | |||||||||||||||   ||||||| | ||||||| | |  |||||||  ||    
T  37726216 tgccgtgagctggtttgcagggtgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagttttcaggataagg-ttg 37726118  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgattt 142  Q
    ||| ||| |||||| ||||| |  ||||||||||||||||    
T  37726117 gtcgtacattgggtcgtacgtatcaatcgtgacacgattt 37726078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 18656657 - 18656614
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  18656657 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 18656614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 37408118 - 37408256
Alignment:
Q  4 gtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggact 103  Q
    |||||||||||| ||||||||| || |||||||||||||||| |  | ||||||||||||||||   ||||||| | ||||||| | |  |||||||  |    
T  37408118 gtgccgtgagctggtttgcagggtgtcaaatcgtggcacgat-tgtgtaaatcgtgacacgattttcaaacttgttggttaagttttcaggataagg-tt 37408215  T
Q  104 ggtcataccttgggttgtacgca--aatcgtgacacgattt 142  Q
    |||| |||||||||| ||||| |  ||||||| ||||||||    
T  37408216 ggtcgtaccttgggtcgtacgtatcaatcgtggcacgattt 37408256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 186
Target Start/End: Original strand, 27352320 - 27352363
Alignment:
Q  143 cttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    |||||||||||| ||| ||||||||||||| |||||||||||||    
T  27352320 cttcagaggaaggctaatatatattgtgttcttgtgcagatttg 27352363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 27453498 - 27453416
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    ||||||||||| ||||| ||| |||||||||||| || |||  || | |||||||||||||||   ||||||||| |||||||    
T  27453498 tgccgtgagctggtttgtagggtgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagt 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 310
Target Start/End: Complemental strand, 47649862 - 47649796
Alignment:
Q  244 agggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||||||||||||    
T  47649862 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagt 47649796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 313
Target Start/End: Complemental strand, 10274646 - 10274605
Alignment:
Q  272 tcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    ||||||||||||||| ||||| || |||||||||||||||||    
T  10274646 tcttgggttgggaaacacattatattcaccttgggtagtgag 10274605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 23198305 - 23198238
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagag 194  Q
    |||||||||||||||||  |||| ||||||||||||| ||  ||||| ||||||||||||  |||||||    
T  23198305 aaatcgtgacacgattttatcagtggaagactagtattta-agtgttcttgtgcagattttgaagagag 23198238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 27974497 - 27974537
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgat 45  Q
    ||||||||||| ||||||||| || ||||||||||||||||    
T  27974497 tgccgtgagctggtttgcagggtgtcaaatcgtggcacgat 27974537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 290; Significance: 1e-163; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 2 - 373
Target Start/End: Complemental strand, 29761179 - 29760810
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29761179 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 29761080  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag 201  Q
    |||||||||||||||   | |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||   ||||||||| |     
T  29761079 ctggtcataccttggtacggacgcaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttg-gggagagcttggaa 29760981  T
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggg-aaaaacattgtaatcac 300  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29760980 gaacttagagtgagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaacattgtaatcac 29760881  T
Q  301 cttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcata 373  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  29760880 cttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc--ttagggttcata 29760810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 2 - 375
Target Start/End: Complemental strand, 24742498 - 24742106
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742498 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 24742399  T
Q  102 ctggtcataccttgggttgtacgca-------------------aatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcaga 182  Q
    |||||||||||| ||   | |||||                   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  24742398 ctggtcatacctgggaacggacgcaaatcgtgccacgatctggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcaga 24742299  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24742298 tttgtaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 24742199  T
Q  283 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24742198 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 24742106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 51520972 - 51520637
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  51520972 aaggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataagg 51520873  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt--------------------cttcagaggaagactagtatatattgtgttattgtgca 180  Q
    |||| || ||||||||||   |||||||||||||||||||||                    |||||||||||| ||||||||||||||||| ||||||     
T  51520872 actgatc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgct 51520774  T
Q  181 gattt-----------gtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtg 269  Q
      |||            |||||||||||| | |||||||||||||| |||||||||   ||||||||||||||| ||||||||||||||||| |||||||    
T  51520773 tttttacaagtaggacttaagagagcttgaatgagcttagagagag-aacttggatagaaaaggagggaaccaatgggttgagtgtctttgttgagagtg 51520675  T
Q  270 tctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||||||||||||    
T  51520674 tctcttgggttgggaaaaacattgtaatcaccttgggt 51520637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 6 - 307
Target Start/End: Original strand, 9223982 - 9224312
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  9223982 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttg 9224081  T
Q  106 tcataccttgggttgtacgcaaatcgtgacacga---------------------tttcttcagaggaagactagtatatattgtgttattgtgcagatt 184  Q
    || ||||||||||     ||| ||||||||||||                     ||||||||||||||||||||||||||||||||| || |||   ||    
T  9224082 tc-taccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgcttttt 9224180  T
Q  185 tg----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
    ||          |||||||||||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  9224181 tgaagtgaatcttaagagagcttgtatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 9224279  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||| || |||||||||||||||||||||||    
T  9224280 tgggtttgggaaaacattgtaatcaccttgggt 9224312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 6 - 307
Target Start/End: Original strand, 9228769 - 9229099
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  9228769 gccgtgagctcgtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttg 9228868  T
Q  106 tcataccttgggttgtacgcaaatcgtgacacga---------------------tttcttcagaggaagactagtatatattgtgttattgtgcagatt 184  Q
    || ||||||||||     ||| ||||||||||||                     ||||||||||||||||||||||||||||||||| ||||||   ||    
T  9228869 tc-taccttgggtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttt 9228967  T
Q  185 tg----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
    ||          |||||||||||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  9228968 tgaagtgaatcttaagagagcttgtatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 9229066  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||| || |||||||||||||||||||||||    
T  9229067 tgggtttgggaaaacattgtaatcaccttgggt 9229099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 126 - 375
Target Start/End: Original strand, 28468220 - 28468470
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagta-tatatt-gtgttattgtgcagattt-gtaagagagcttgtaggagcttagagagagaaacttg 222  Q
    |||||||||||||||||  |||| |||||||||||| ||| |  ||||| |||||||||||| | | ||||||||| | |||||||||||||||||||||    
T  28468220 aaatcgtgacacgattttatcagtggaagactagtagtatttaagtgttcttgtgcagattttggaggagagcttggaagagcttagagagagaaacttg 28468319  T
Q  223 gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatt 322  Q
    ||||||||||||||||||   |||||| ||||||||||||| |||  ||||||||||||||||||| ||||||| ||||||||||||||| || ||||      
T  28468320 gattacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgggtagtga-gatttcacc 28468418  T
Q  323 agttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  28468419 a-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 28468470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 56141596 - 56141728
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaa-tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggt 106  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  56141596 cgtgagctagtttgcaggacgccaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggt 56141695  T
Q  107 cataccttgggttgtacgcaaatcgtgacacgat 140  Q
    | ||||||||||   | |||||||||||||||||    
T  56141696 c-taccttgggtcagatgcaaatcgtgacacgat 56141728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 18712338 - 18712449
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  18712338 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttg 18712437  T
Q  106 tcataccttgggt 118  Q
    ||| |||||||||    
T  18712438 tca-accttgggt 18712449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 7122374 - 7122485
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  7122374 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 7122473  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  7122474 cgtgacacgatt 7122485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 5733167 - 5733061
Alignment:
Q  3 ggtgccgtga-gctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    |||||||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  5733167 ggtgccgtgaagcaagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataagga 5733068  T
Q  102 ctggtca 108  Q
    |||||||    
T  5733067 ctggtca 5733061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 8393089 - 8393201
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    |||||||||||||||| | || ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |  ||||||| ||||||| ||    
T  8393089 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttgggtggtacgcagat 8393188  T
Q  130 cgtgacacgattt 142  Q
    |||||||||||||    
T  8393189 cgtgacacgattt 8393201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 45347410 - 45347502
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  45347410 agtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 45347502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 45356891 - 45356983
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  45356891 agtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 45356983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 18856231 - 18856124
Alignment:
Q  2 aggtgccgtgagcta-gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||| | |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  18856231 aggtgccgtgagccaagtttgctggatgcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataagg 18856132  T
Q  101 actggtca 108  Q
    ||||||||    
T  18856131 actggtca 18856124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 18712581 - 18712671
Alignment:
Q  217 aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  18712581 aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgttatcaccttgggt 18712671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 28468060 - 28468196
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||||||   ||||||||||||||||| ||  ||||||||||||    
T  28468060 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactg 28468159  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacga 139  Q
    ||| ||||||| |  |||||  |||||||||||||||    
T  28468160 gtcgtaccttgtgacgtacgtacaaatcgtgacacga 28468196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 13992793 - 13992686
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    |||||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||   ||||||||||||||||| | | |||||||||||||||    
T  13992793 cgtgagctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtc 13992694  T
Q  108 ataccttg 115  Q
    ||||||||    
T  13992693 ataccttg 13992686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 7124596 - 7124673
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7124596 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 5135756 - 5135868
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||| | |||||||  | |||||||    
T  5135756 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaa 5135855  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  5135856 tcgtgacacgatt 5135868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 5137982 - 5138094
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||| | |||||||  | |||||||    
T  5137982 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaa 5138081  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  5138082 tcgtgacacgatt 5138094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 8395298 - 8395410
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    |||||||| ||||||| | || |||||||||||| || |||||||||||||||||||||||| ||||||||||||||| |  ||||||| ||||||| ||    
T  8395298 caaatcgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtggtacgcagat 8395397  T
Q  130 cgtgacacgattt 142  Q
    |||||||||||||    
T  8395398 cgtgacacgattt 8395410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 208 - 371
Target Start/End: Original strand, 31985404 - 31985563
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||   |||||||||||| ||||||  |||  ||||||||||||||  ||||||||||| ||||||||||    
T  31985404 agagagagaaacttggattacaaaggagggaactttagggttgagtgtttttgtattgaggatctcttgggttggg--aaacattgtaaacaccttgggt 31985501  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttca 371  Q
    |||||  | ||||  | | ||||||||  |||||||||| | ||||||||||||||||||||||    
T  31985502 agtga-aatttcacca-tgggaaggatcaaaagcttccttttgtgtcttctcttttagggttca 31985563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 3777875 - 3777772
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  3777875 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3777778  T
Q  308 agtgag 313  Q
    ||||||    
T  3777777 agtgag 3777772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 16623064 - 16623167
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  16623064 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16623161  T
Q  308 agtgag 313  Q
    ||||||    
T  16623162 agtgag 16623167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 31495819 - 31495717
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  31495819 tgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 31495720  T
Q  105 gtc 107  Q
    |||    
T  31495719 gtc 31495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 126 - 307
Target Start/End: Complemental strand, 3814383 - 3814202
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag--gagctt-agagagagaaacttg 222  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||   |||| |||| | | | |||  |||||| ||||||| |||||||    
T  3814383 aaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg-aagacaacct-taggagagcttaagagaga-aaacttg 3814287  T
Q  223 gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||   ||||||||||| || | ||| || |||||||||  |||||||| |||| |||||||||||||||||||||||||||||||    
T  3814286 gacatcaaaggagggatcctatggggtgtgtgtctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggt 3814202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 3814521 - 3814421
Alignment:
Q  7 ccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggt 106  Q
    |||| ||| |||||||| || ||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||    
T  3814521 ccgtaagcaagtttgcaagacgccaaatcgtgtcacgat-ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggt 3814423  T
Q  107 ca 108  Q
    ||    
T  3814422 ca 3814421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 5268971 - 5269074
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||| |    
T  5268971 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggat 5269068  T
Q  308 agtgag 313  Q
    ||||||    
T  5269069 agtgag 5269074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 5396442 - 5396545
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||  ||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5396442 agagagagaaacttggattacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5396539  T
Q  308 agtgag 313  Q
    ||||||    
T  5396540 agtgag 5396545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 10047707 - 10047604
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||  |||  ||||||||||||||  ||||||||||| ||||||||||    
T  10047707 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttgggttggg--aaacattgtaaacaccttgggt 10047610  T
Q  308 agtgag 313  Q
    ||||||    
T  10047609 agtgag 10047604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 25861802 - 25861907
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||| ||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||     
T  25861802 ttagagagagaaacttggattacaaagaaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttga 25861899  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  25861900 gtagtgag 25861907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 6743186 - 6743289
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   ||| |||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  6743186 agagagagaaacttggattacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatctcttgggttggg--aaacattgtaaacaccttgggt 6743283  T
Q  308 agtgag 313  Q
    | ||||    
T  6743284 aatgag 6743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 16628643 - 16628746
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||| ||||||| ||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  16628643 agagagagaaaattggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16628740  T
Q  308 agtgag 313  Q
    ||||||    
T  16628741 agtgag 16628746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 36315001 - 36315104
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||| ||||||||||||||||||||| |||   |||||| |||||||||||||||||  ||||||||||||||  ||||||||||| ||| ||||||    
T  36315001 agagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacacattgggt 36315098  T
Q  308 agtgag 313  Q
    ||||||    
T  36315099 agtgag 36315104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 36329210 - 36329313
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||| ||||||||||||||||||||| |||   |||||| |||||||||||||||||  ||||||||||||||  ||||||||||| ||| ||||||    
T  36329210 agagagataaacttggattacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacacattgggt 36329307  T
Q  308 agtgag 313  Q
    ||||||    
T  36329308 agtgag 36329313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 313
Target Start/End: Original strand, 8689270 - 8689370
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   |||||| ||||||||||||| |||  ||||||||||||||  ||||||| ||| |||||||| ||||    
T  8689270 gagagaaacttggattacaaaggaggtaactttagggtttagtgtctttgtagtgaggatctcttgggttggg--aaacattttaaacaccttggatagt 8689367  T
Q  311 gag 313  Q
    |||    
T  8689368 gag 8689370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 377
Target Start/End: Complemental strand, 5143582 - 5143422
Alignment:
Q  212 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtg 311  Q
    |||||||||||||||||| |||||| |||   |||||||||||||||||||| |||  |||||||| |||||  |||| |||||| |||||| |||||||    
T  5143582 agagaaacttggattacagaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattggg--aaactttgtaaacaccttaggtagtg 5143485  T
Q  312 aggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatattct 377  Q
    | || ||||  | ||||||||||   ||||||||| | |||| ||||| |||||||||||||||||    
T  5143484 a-gatttcacca-ttggaaggatcataagcttccttttgtgttttctc-tttagggttcatattct 5143422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 306
Target Start/End: Original strand, 45347540 - 45347721
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagctta-gagagagaaacttgg 223  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||| ||||||   |||| |||| | | |  || ||||||| |||||| || |||||    
T  45347540 aaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtgcttttttg-aagacaaccttaagagagcttaagagagaaaatcttgg 45347638  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  ||||||||||||| ||||||||||||||||||||||||||||||    
T  45347639 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtctcttaggttgggaaaaacattgtaatcaccttggg 45347721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 54867505 - 54867431
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||    
T  54867505 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttgggttgg 54867431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 56141735 - 56141788
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  56141735 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 56141788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 42599344 - 42599448
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||| |||||||||||||||||||||||||| |||   | |||||||||||||||||| |||  |||||| |||||||  ||||||| ||| ||||||||    
T  42599344 ttagtgagagaaacttggattacaaaggaggtaacttta-ggttgagtgtctttgtagtgaggttctcttcggttggg--aaacattctaaacaccttgg 42599440  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  42599441 gtagtgag 42599448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 5112564 - 5112460
Alignment:
Q  208 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||||||||||||| |||||||||||||| ||    ||| |||||||||||||| | |||  |||||||||||||||||  |||||||| |||||||||    
T  5112564 agagagagaaacttgagattacaaaggaggtaattttaggtttgagtgtctttgttgtgaggttctcttgggttgggaaa--cattgtaaacaccttggg 5112467  T
Q  307 tagtgag 313  Q
    |||||||    
T  5112466 tagtgag 5112460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 18712478 - 18712531
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  18712478 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 18712531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 18856086 - 18856033
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  18856086 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 18856033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 38152208 - 38152311
Alignment:
Q  208 agagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||||||||| || |||||||||| |||| |||   |||||||||||||||||||| |||  ||||||||| ||||  ||| ||||||| |||||||||    
T  38152208 agagagagaaaatttggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggatctcttgggatggg--aaatattgtaaacaccttggg 38152305  T
Q  307 tagtga 312  Q
    ||||||    
T  38152306 tagtga 38152311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 306
Target Start/End: Original strand, 45357021 - 45357201
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagcttagagagagaaa-cttgg 223  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||| ||||||   |||| |||| | | |  || ||||||| ||||||||| |||||    
T  45357021 aaatcgtgacacgatttcttctggggaggactagtatatattgtgttcttgtgcttttttg-aagacaaccttaagagagctta-agagagaaatcttgg 45357118  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  ||||| || |||| ||||||||||||||||||||||||||||||    
T  45357119 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 45357201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 307
Target Start/End: Complemental strand, 6542480 - 6542378
Alignment:
Q  204 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacct 302  Q
    |||| ||||||||||| | ||| ||||||||||| |||   |||||||||||||||||||  |||  ||||||||||||||  ||||||||||| |||||    
T  6542480 gctttgagagagaaacctaggaatacaaaggaggtaactttagggttgagtgtctttgtaatgaggttctcttgggttggg--aaacattgtaaacacct 6542383  T
Q  303 tgggt 307  Q
    |||||    
T  6542382 tgggt 6542378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 51336933 - 51337035
Alignment:
Q  204 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacct 302  Q
    |||| ||||||||||||| ||| ||||||||| | |||   |||||||| ||||||||||| |||  |||||||||||||  |||||||||||| |||||    
T  51336933 gctttgagagagaaacttaggaatacaaaggaagtaactttagggttgaatgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacacct 51337030  T
Q  303 tgggt 307  Q
    |||||    
T  51337031 tgggt 51337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 5733023 - 5732971
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtg 178  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||| |||||    
T  5733023 aaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtg 5732971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 313
Target Start/End: Original strand, 3793843 - 3793954
Alignment:
Q  203 agcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatca 299  Q
    ||||| ||||||||||||||| | || |||||||| |||   |||||||||||||||| ||| |||  |||||||  ||||||  |||||||||||| ||    
T  3793843 agctttgagagagaaacttgggaatataaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgagggttgg--aaaacattgtaaaca 3793940  T
Q  300 ccttgggtagtgag 313  Q
    ||||||||||||||    
T  3793941 ccttgggtagtgag 3793954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 5732887 - 5732844
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  5732887 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 5732844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 24334144 - 24334034
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| ||||||||||||||| | ||||||| ||| |||   ||||||||| |||||||||| |||  |||||||  ||||||||||  |||||||| |||    
T  24334144 gctttgagagagaaacttgggaatacaaagaaggtaactttagggttgagagtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 24334047  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  24334046 cttgggtagtgag 24334034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 211 - 375
Target Start/End: Complemental strand, 5148001 - 5147842
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    ||||||||||||||||||| |||||| |||   |||||| |||||||||||||  ||  ||||||| ||||||  ||||||||||| ||| |||| || |    
T  5148001 gagagaaacttggattacacaggaggtaactttagggtttagtgtctttgtagtaaggatctcttgagttggg--aaacattgtaaacacattggataat 5147904  T
Q  311 gaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    || || ||||  | ||||||||||   ||||||||| | |||| ||||| |||||||||||||||    
T  5147903 ga-gatttcacca-ttggaaggatcataagcttccttttgtgttttctc-tttagggttcatatt 5147842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 142
Target Start/End: Original strand, 31985236 - 31985328
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgacacgattt 142  Q
    ||||||||||||||||   ||||||||| ||||||| | |  |||||||||||||| ||||||| |  |||||||  ||||||||||||||||    
T  31985236 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgattt 31985328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 5148216 - 5148157
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 67  Q
    |||||||||||||||||| || | |||||||||||||| ||| |||| | ||||||||||    
T  5148216 cgtgagctagtttgcagggtgaccaatcgtggcacgattttgtgaaaacttgacacgatt 5148157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 18855949 - 18855906
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||| || |||| ||||||||||||||||||||||||||||||    
T  18855949 gagagagtttcttaggttgggaaaaacattgtaatcaccttggg 18855906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 39774075 - 39774179
Alignment:
Q  208 agagagagaaacttggatt-acaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||||||||||| || |||||||||| |||   |||||||||  | ||||||  |||  ||||||| |||||||||  |||||||| |||||||||    
T  39774075 agagagagaaacttgggtttacaaaggaggtaactttagggttgagattatttgtaacgaggttctcttgagttgggaaa--cattgtaaacaccttggg 39774172  T
Q  307 tagtgag 313  Q
    |||||||    
T  39774173 tagtgag 39774179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 56141713 - 56141750
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgatt 67  Q
    ||||||||| |||||||||||||||||||| |||||||    
T  56141713 caaatcgtgacacgatcttgggaaatcgtggcacgatt 56141750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 13992654 - 13992595
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    |||||||||||||||||  |||| ||||||||||||| ||  ||||| |||||||||||||    
T  13992654 aaatcgtgacacgattttatcagtggaagactagtattta-agtgttcttgtgcagatttg 13992595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 280; Significance: 1e-157; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 11098465 - 11098858
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||    
T  11098465 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataagg 11098564  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacg-------------------atttcttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    |||||||| |||||||||||||||||||||||||||||                   ||||||||||||||||||||| |||||||||||| ||||||||    
T  11098565 actggtcaaaccttgggttgtacgcaaatcgtgacacgatctggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgcag 11098664  T
Q  182 atttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
    |||||||  |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11098665 atttgtagaagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 11098764  T
Q  282 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11098765 ggaaaaacattgtaatcaccttgggtagtgaggagtacattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 11098858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 2 - 375
Target Start/End: Complemental strand, 14292046 - 14291654
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||    
T  14292046 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataagga 14291947  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgat-------------------ttcttcagaggaagactagtatatattgtgttattgtgcaga 182  Q
    |||||||||||||||||||||||||||||||||||||||                   |||||||||||||||||||||||||||||||| |||||||||    
T  14291946 ctggtcataccttgggttgtacgcaaatcgtgacacgatctggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcaga 14291847  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    |||   |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  14291846 ttttagagagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagcgtctttgtagatagtgtctcttgggttgg 14291747  T
Q  283 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14291746 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 14291654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 9295940 - 9296332
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9295940 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataagg 9296039  T
Q  101 actggtcataccttgggttgtacgcaaat-------------------cgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    |||||||||||||||||| | ||||||||                   |||||||||||| |||||||||||||||||||| ||  ||||| ||||||      
T  9296040 actggtcataccttgggtcggacgcaaatcgtgacacgatctgaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgctt 9296139  T
Q  182 atttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
     |||| | ||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  9296140 ttttggaggagagcttggaagagcttagagagaaaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattgggttg 9296239  T
Q  282 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  9296240 ggaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 9296332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 203 - 375
Target Start/End: Complemental strand, 3492085 - 3491915
Alignment:
Q  203 agcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacct 302  Q
    |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||  ||||||||||||| ||||||||||||| |||||    
T  3492085 agcttagagagagaaacttggattacaaaggagggaaatctagggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaaacacct 3491986  T
Q  303 tgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||| || | ||  | |||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  3491985 tgggtagtga-gattccacca-ttggaaggatcttaagcttcctcttgtgtcttctcttttagggttcatatt 3491915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 168 - 313
Target Start/End: Complemental strand, 25410000 - 25409854
Alignment:
Q  168 gtgttattgtgcagatttgtaag-agagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaga 266  Q
    ||||| ||||||||||||  ||| |||||||| | |||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  25410000 gtgttcttgtgcagattttgaagtagagcttggaagagcttagagagagaaacttggattacagaggagggaacactagggttgagtgtctttgtagaga 25409901  T
Q  267 gtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |  ||||||||||||||||||||||||||| ||||||||||||||||    
T  25409900 ggatctcttgggttgggaaaaacattgtaaacaccttgggtagtgag 25409854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 12647860 - 12647749
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    ||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  12647860 caaatcgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 12647761  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  12647760 cgtgacacgatt 12647749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 3492294 - 3492184
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||  ||||||||| |    
T  3492294 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacag 3492195  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  3492194 gtcgtaccttg 3492184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 25410183 - 25410073
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||| ||    
T  25410183 tgccgtgagatggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatg 25410084  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  25410083 gtcgtaccttg 25410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 126 - 307
Target Start/End: Original strand, 39811700 - 39811894
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgta------------agagagcttgtaggagcttag-aga 212  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||   |||| |            |||||||||||| |||||| | | |    
T  39811700 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagtaggacttaagagagagcttgtatgagctttgtaca 39811799  T
Q  213 gagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  39811800 gagaa-cttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttgagaaaaacattgtaatcaccttgggt 39811894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 210 - 375
Target Start/End: Complemental strand, 40739158 - 40738997
Alignment:
Q  210 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtag 309  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||     
T  40739158 agagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtaa 40739061  T
Q  310 tgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||| || ||||  | ||||||||||  ||||||| || | ||||||||||||||||||||||||||    
T  40739060 tga-gatttcacca-ttggaaggatcaaaagcttactattgtgtcttctcttttagggttcatatt 40738997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 39811561 - 39811657
Alignment:
Q  7 ccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggact 103  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  39811561 ccgtaagcaagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggact 39811657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 4484840 - 4484703
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||||||||||||| |||||||||||| |||||||||  | |||||||||||||||   ||||||||||||||||| ||  ||||||||||||    
T  4484840 tgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactg 4484741  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgat 140  Q
    ||| |||||||||  |||||  | ||||||||||||||    
T  4484740 gtcgtaccttgggacgtacgtaccaatcgtgacacgat 4484703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 30833004 - 30833114
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||| |||  ||||||||| |    
T  30833004 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacag 30833103  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  30833104 gtcgtaccttg 30833114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 32289231 - 32289367
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| ||||||||| || |||||||||| | |||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  32289231 tgccgtgagctggtttgcagggtgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactg 32289330  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacga 139  Q
    ||| |||||||||  |||||  | |||||||||||||    
T  32289331 gtcgtaccttgggacgtacgctccaatcgtgacacga 32289367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 19344916 - 19344824
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  19344916 agtttgctggaagcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 19344824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 19349774 - 19349682
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||||||||||    
T  19349774 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtca 19349682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 211 - 372
Target Start/End: Original strand, 36757536 - 36757692
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||| ||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||    
T  36757536 gagagaaacttgaattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagt 36757633  T
Q  311 gaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    || || ||||  | ||||||||||  |||||||||| | |||||||||| ||||||||||||    
T  36757634 ga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 36757692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 14698778 - 14698883
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||| ||||||||  ||||||||||| ||||||||    
T  14698778 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcgggttggg--aaacattgtaaacaccttgg 14698875  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  14698876 gtagtgag 14698883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 33118463 - 33118358
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||   |||||||||| ||||||||    
T  33118463 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--gaacattgtaaacaccttgg 33118366  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  33118365 gtagtgag 33118358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 28258948 - 28259098
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||| ||| |||  ||||||||||||||  ||||||||||| || |||||||    
T  28258948 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttggg--aaacattgtaaacatcttgggt 28259045  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttt 362  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||||||    
T  28259046 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt 28259098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 33528395 - 33528498
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||| ||||||    
T  33528395 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacacattgggt 33528492  T
Q  308 agtgag 313  Q
    ||||||    
T  33528493 agtgag 33528498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 21630268 - 21630168
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   || ||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||    
T  21630268 gagagaaacttggattacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagt 21630171  T
Q  311 gag 313  Q
    |||    
T  21630170 gag 21630168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 361
Target Start/End: Original strand, 23078245 - 23078391
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||    |||||||||||||||||   |||  ||||||||||||||  ||||||||||| |||||||||||||    
T  23078245 gagagaaacttggattacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatctcttgggttggg--aaacattgtaaacaccttgggtagt 23078342  T
Q  311 gaggagttcattagttggaaggatttaaagcttcctctagtgtcttctctt 361  Q
    || || ||||| | ||||||||||  |||||||||| | ||||||||||||    
T  23078343 ga-gatttcatca-ttggaaggatcaaaagcttccttttgtgtcttctctt 23078391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 34389174 - 34389074
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   ||||||| |||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||    
T  34389174 gagagaaacttggattacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagt 34389077  T
Q  311 gag 313  Q
    |||    
T  34389076 gag 34389074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 6266357 - 6266459
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||  ||||||||||||||||||||   |||||| |||||||||| ||| ||||||||| ||    
T  6266357 tgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatg 6266456  T
Q  105 gtc 107  Q
    |||    
T  6266457 gtc 6266459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 20522548 - 20522445
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||| |||||||||||||| |||   |||||||||||||||||||| |||| ||||||||||||||  || |||||||| || |||||||    
T  20522548 agagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttgggttggg--aagcattgtaaacaacttgggt 20522451  T
Q  308 agtgag 313  Q
    ||||||    
T  20522450 agtgag 20522445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 10445236 - 10445341
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||||||||||||||| |||||||||||||| |||   |||||||| ||||||||||| |||  ||||| ||||||||  ||||||||||| ||||||||    
T  10445236 ttagagagagaaacttagattacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcgggttggg--aaacattgtaaacaccttgg 10445333  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  10445334 gtagtgag 10445341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 17865522 - 17865428
Alignment:
Q  217 aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |||||||||||||||||||| |||   |||||||||||||||||||| ||   ||||||||||||||  ||||||||||| ||||||||||||||||    
T  17865522 aacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaagatctcttgggttggg--aaacattgtaaacaccttgggtagtgag 17865428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 28258733 - 28258871
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| || ||||||||||||| || ||| |||||||||||||||||   ||||||||| ||||||| | |  |||||||  ||    
T  28258733 tgccgtgagctggtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttg 28258831  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgattt 142  Q
    ||| |||||||||| |||||||  ||||||| ||||||||    
T  28258832 gtcgtaccttgggtcgtacgcatcaatcgtggcacgattt 28258871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 40739374 - 40739235
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| | ||| ||||||| |||   ||||||||||||||||| | |  ||||||||| |    
T  40739374 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagttttcaggataaggacag 40739275  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgattt 142  Q
    ||| ||||||| |  ||||| |  ||||||||||||||||    
T  40739274 gtcgtaccttgtgacgtacgtatcaatcgtgacacgattt 40739235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 25398711 - 25398660
Alignment:
Q  324 gttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  25398711 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 25398660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 25403849 - 25403798
Alignment:
Q  324 gttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  25403849 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 25403798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 25407838 - 25407787
Alignment:
Q  324 gttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  25407838 gttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 25407787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 8389920 - 8390023
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||  |||   ||||||||| |||||||||| ||   ||||||||||| ||  ||||||||||| |||||||| |    
T  8389920 agagagagaaacttggattacaaaggagataactttagggttgagggtctttgtagtgatgatctcttgggttagg--aaacattgtaaacaccttggat 8390017  T
Q  308 agtgag 313  Q
    ||||||    
T  8390018 agtgag 8390023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 13569655 - 13569552
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||| |||  |||   |||||| ||||||||||||| |||  ||||||||||||||  ||||||| ||| |||||||| |    
T  13569655 agagagagaaacttggattacaaatgagataactttagggttaagtgtctttgtagtgaggatctcttgggttggg--aaacattataaacaccttggat 13569558  T
Q  308 agtgag 313  Q
    ||||||    
T  13569557 agtgag 13569552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 31056376 - 31056266
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||    
T  31056376 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 31056279  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  31056278 cttgggtagtgag 31056266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 32247244 - 32247188
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||    
T  32247244 aaatcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactggtca 32247188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 310
Target Start/End: Original strand, 10707023 - 10707123
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||| |||||||||||||| |||   |||||| | | ||||||||| |||  |||||||||||  || ||||||||||| ||||||||||    
T  10707023 agagagagaaacttagattacaaaggaggtaactttagggtttattatctttgtagtgaggatctcttgggtt--gagaaacattgtaaacaccttgggt 10707120  T
Q  308 agt 310  Q
    |||    
T  10707121 agt 10707123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 34682097 - 34682207
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacct 302  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||| |    | |||||||||||| |||||    
T  34682097 gctttgagagagaaacttgggaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagagttggaaaacattgtaaacacct 34682196  T
Q  303 tgggtagtgag 313  Q
    |||||||||||    
T  34682197 tgggtagtgag 34682207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 32247150 - 32247097
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||    
T  32247150 aaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtgc 32247097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 32247011 - 32246968
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  32247011 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 32246968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 8040397 - 8040287
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| ||||||||||||||| | ||||||||||| |||   | |||||||||||||||||| ||   |||||||  ||||||||||  |||||||| |||    
T  8040397 gctttgagagagaaacttggtaatacaaaggaggtaactttatggttgagtgtctttgtagtgaagttctcttgagggttgggaaa--cattgtaaacac 8040300  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  8040299 cttgggtagtgag 8040287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 39483223 - 39483156
Alignment:
Q  244 agggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |||||||||||||||||| | |||  ||||||||||||||  ||| ||||||| ||||||||||||||||    
T  39483223 agggttgagtgtctttgttgtgaggatctcttgggttggg--aaatattgtaaacaccttgggtagtgag 39483156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 2869501 - 2869566
Alignment:
Q  246 ggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |||||||||||||||||| |||  ||||||| |||||  |||||||||||| ||| ||||||||||||    
T  2869501 ggttgagtgtctttgtagtgaggttctcttgagttgg--aaaacattgtaaacacattgggtagtgag 2869566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 313
Target Start/End: Original strand, 2837816 - 2837903
Alignment:
Q  226 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    ||||||||||| |||   |||||||||||||||||||| |||  ||||||  ||||||||  ||||||||||| |||||||| |||||||    
T  2837816 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacaccttggatagtgag 2837903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 35397839 - 35397732
Alignment:
Q  206 ttagagagagaaacttggat--tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacctt 303  Q
    ||||||||||||||||| |   |||||||||||  ||   |||||||| ||||||||||| |||  |||  ||||||||  ||||||||||||| |||||    
T  35397839 ttagagagagaaacttgaaaaatacaaaggaggtcactttagggttgattgtctttgtagtgaggttcttctgggttgg--aaaacattgtaattacctt 35397742  T
Q  304 gggtagtgag 313  Q
    ||||||||||    
T  35397741 gggtagtgag 35397732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 41586357 - 41586425
Alignment:
Q  244 agggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaca-ttgtaatcaccttgggtagtgag 313  Q
    |||||||||||||||||  |||||  |||||||||||||  |||||| |||||| ||||||||||||||||    
T  41586357 agggttgagtgtctttggtgagagcttctcttgggttgg--aaaacagttgtaaacaccttgggtagtgag 41586425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 4484698 - 4484631
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagag 194  Q
    |||||||||||||||||  |||| ||||| ||||||| ||  ||||| ||||||||||||| |||||||    
T  4484698 aaatcgtgacacgattttatcagtggaaggctagtattta-agtgttcttgtgcagatttgaaagagag 4484631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 30833146 - 30833205
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    |||||||||||||||||  |||| ||||||||||||| ||  ||||| |||||||||||||    
T  30833146 aaatcgtgacacgattttatcagtggaagactagtattta-agtgttcttgtgcagatttg 30833205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 20357106 - 20357478
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20357106 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataagg 20357205  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgta 200  Q
    || ||||| |||||||||   |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||   |||| | |||||||||      
T  20357206 accggtcaaaccttgggtcagacgcaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt-tttgaaggagagcttggt 20357304  T
Q  201 ggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 300  Q
     |||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  20357305 agagcttagtgagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcac 20357403  T
Q  301 cttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  20357404 cttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 20357478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 2 - 375
Target Start/End: Complemental strand, 2058526 - 2058132
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058526 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 2058427  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtgcaga 182  Q
    ||||||||||||||||||||||||||||||||||||||| |                   |||||||||||| ||||||||||||||||| |||||||||    
T  2058426 ctggtcataccttgggttgtacgcaaatcgtgacacgatctggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcaga 2058327  T
Q  183 tttgtaa-gagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
    |||| || ||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2058326 tttgaaaagagagcttggaagagcttagagagagaa-cttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 2058228  T
Q  282 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagtt--ggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  2058227 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 2058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 2 - 375
Target Start/End: Complemental strand, 21640344 - 21639973
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  21640344 aggtgccgtgagctagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataagga 21640245  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag 201  Q
    |||||||| ||||||   | |||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||   |||| | ||||||||| |     
T  21640244 ctggtcatgccttggaacggacgcaaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgctattttgaaggagagcttggaa 21640145  T
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  21640144 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacacc 21640045  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| || ||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  21640044 ttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 21639973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 2 - 375
Target Start/End: Original strand, 1532983 - 1533374
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||    
T  1532983 aggtgccatgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtgaaacttactcgttaagtatccttgataagga 1533082  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtgcaga 182  Q
    ||||| ||||||||||   ||| |||||||||||||||| |                   |||||||||||| ||||||||||| ||||| |||| ||||    
T  1533083 ctggttataccttgggacatacacaaatcgtgacacgatctggaaatcgtggcacgattgcttcagaggaaggctagtatatatagtgttcttgtacaga 1533182  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    ||||   ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1533183 tttgagggagagcttggaagagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 1533282  T
Q  283 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1533283 gaaaaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 1533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 5 - 375
Target Start/End: Complemental strand, 21646560 - 21646171
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||||||   ||||||||||||||||||||||||||||| ||||    
T  21646560 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactg 21646461  T
Q  105 gtcataccttgggttgtacg--caa-------------------atcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcaga- 182  Q
    |||||||||||||  |||||  |||                   |||||||||||||||  |||||||||| ||||||| ||  ||||| |||||||||     
T  21646460 gtcataccttgggacgtacgttcaaatcgtgccacgatctggaaatcgtgacacgattttatcagaggaaggctagtattta-agtgttcttgtgcagat 21646362  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    ||||    |||||||| | |||||||||||||||||||| |||||||||||||| |||   ||||||||||||||||||||||||  |||||||||||||    
T  21646361 tttggggaagagcttggaagagcttagagagagaaacttagattacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttgggttgg 21646262  T
Q  283 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||| ||||||||||||||| || ||||  | |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  21646261 gaaaaacattgtaaacaccttgggtagtga-gatttcacca-ttggaaggatctaaatcttcctctagtgtcttctcttttagggttcatatt 21646171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 6 - 305
Target Start/End: Complemental strand, 4873638 - 4873310
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||| |    
T  4873638 gccgtaagatagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttg 4873539  T
Q  106 tcataccttgggttgtacgcaaatcgtgaca---------------------cgatttcttcagaggaagactagtatatattgtgttattgtgcagatt 184  Q
    || | ||||||||     |||||||||||||                     |||||||||||||||||||||||||||||||||||| ||||||   ||    
T  4873538 tc-ttccttgggtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttt 4873440  T
Q  185 tg----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
    ||          |||||||||||| | |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  4873439 tgaagaagaacttaagagagcttggaagagcttagagagag-aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 4873341  T
Q  275 tgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||||||||||||||||||||||||||||||    
T  4873340 tgggttgggaaaaacattgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 24789507 - 24789646
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  24789507 ggtgccgtgagctagtttgcagggtgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggac 24789606  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  24789607 tggtcataccttgggttgtacgcaaatcttgacacgattt 24789646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 3 - 375
Target Start/End: Complemental strand, 18414194 - 18413804
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||| |||||||||  ||||||||||| ||||||||||||||||||| |||||||||  ||||||||| ||||||| ||| ||||||||||    
T  18414194 ggtgccgtgagctggtttgcagggcgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggac 18414095  T
Q  103 tggtcataccttgggttgtacg--caaatcgtgacacg-------------------atttcttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    ||||| ||||||| |  |||||  | ||||||||||||                   ||||  |||  ||||||||||||| ||  ||||| ||||||||    
T  18414094 tggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacaattttatcattggaagactagtattta-agtgttcttgtgcag 18413996  T
Q  182 a-tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 280  Q
    | |||| | ||||||||| | |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||    
T  18413995 attttggaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggtt 18413896  T
Q  281 gggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||| ||||| ||||||||||||||| || ||||  | |||||||||| | ||||||||||| |||||||| |||||||||||||||||    
T  18413895 gggaaaaacaatgtaaacaccttgggtagtga-gatttcacca-ttggaaggatcttaagcttcctcttgtgtcttc-cttttagggttcatatt 18413804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 3 - 375
Target Start/End: Complemental strand, 18409318 - 18408928
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||| ||||||||| ||||||||| || |||||||||| ||||||||||||||||||  ||||||||| ||||||| ||| ||||||||||    
T  18409318 ggtgccgtgagctggtttgcagggtgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggac 18409219  T
Q  103 tggtcataccttgggttgtacg--caaatcgtg-------------------acacgatttcttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    ||||| ||||||| |  |||||  | |||||||                   |||||||||  |||| ||||||||||||| ||  ||||| | ||||||    
T  18409218 tggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtattta-agtgttctcgtgcag 18409120  T
Q  182 a-tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 280  Q
    | |||| | ||||||||| | |||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||    
T  18409119 attttggaggagagcttggaagagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggtt 18409020  T
Q  281 gggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||| ||||||||||||||| || ||||  | ||  |||||| | ||||||||||| |||||||| |||||||||||||||||    
T  18409019 gggaaaaacattgtaaacaccttgggtagtga-gatttcacca-ttaaaaggatcttaagcttcctcttgtgtcttc-cttttagggttcatatt 18408928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 20343580 - 20343761
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| |||| |||||| |||||||| ||||||  |||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  20343580 ggtgccgtgagctaggttgccggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 20343679  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    ||||| |  ||||||| ||||||| ||||||||||||||||  |||||||||||||||||| |  ||||| |||||||||||||    
T  20343680 tggtcgtttcttgggtggtacgcagatcgtgacacgatttcaacagaggaagactagtataaa--gtgttcttgtgcagatttg 20343761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 126 - 307
Target Start/End: Complemental strand, 12397282 - 12397091
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg-----------taagagagcttgtaggagcttagagaga 214  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| ||||||   |||            |||||||||||||| |||||||||||||    
T  12397282 aaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgccttttttgaagaagaacttaagagagcttgtatgagcttagagaga 12397183  T
Q  215 gaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||| |||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12397182 gaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 12397091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 307
Target Start/End: Original strand, 31109294 - 31109489
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgta------------agagagcttgtaggagctta-gaga 212  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||   |||| |            |||||||||||| ||||||| ||||    
T  31109294 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagataaacttaagagagagcttgtatgagcttaagaga 31109393  T
Q  213 gagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    || ||||||||||  ||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31109394 gaaaaacttggatagcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 31109489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 12406774 - 12406639
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  12406774 gccgtgagctagtttgcaagacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttg 12406675  T
Q  106 tcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    || ||||||||||     |||||||||||||||||||    
T  12406674 tc-taccttgggtccgttgcaaatcgtgacacgattt 12406639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 24023907 - 24024004
Alignment:
Q  11 gagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  24023907 gagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtca 24024004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 189 - 307
Target Start/End: Original strand, 24024115 - 24024232
Alignment:
Q  189 agagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaa 288  Q
    |||||||||||| |||||| ||||||||| |||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||    
T  24024115 agagagcttgtatgagctttgagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggaaaaa 24024213  T
Q  289 cattgtaatcaccttgggt 307  Q
    ||||||||||||| |||||    
T  24024214 cattgtaatcaccgtgggt 24024232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 30 - 186
Target Start/End: Complemental strand, 32060781 - 32060626
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    |||||||||||||||| | || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  32060781 caaatcgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 32060682  T
Q  130 cgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    ||||||||||||    ||||||||||||||||  ||  ||||| |||||||||||||    
T  32060681 cgtgacacgattggaacagaggaagactagtactta-agtgttcttgtgcagatttg 32060626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 6592814 - 6592703
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    |||||||||||||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  6592814 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 6592715  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  6592714 cgtgacacgatt 6592703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 6595030 - 6594919
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    |||||||||||||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  6595030 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 6594931  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  6594930 cgtgacacgatt 6594919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 195
Target Start/End: Original strand, 48408481 - 48408672
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||   ||||||||||||||||| ||   |||||||||||    
T  48408481 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactg 48408580  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagc 195  Q
    ||| |||||||    |||||  | ||||||||||||||||  |||| ||||||||||||| ||  ||||| ||||||||||||  ||||||||    
T  48408581 gtcgtaccttgtaacgtacgtaccaatcgtgacacgattttatcagtggaagactagtattta-agtgttcttgtgcagattttgaagagagc 48408672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 43504638 - 43504526
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  43504638 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 43504539  T
Q  105 gtcataccttggg 117  Q
    ||| |||||||||    
T  43504538 gtcgtaccttggg 43504526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 39731016 - 39731153
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| | |||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  39731016 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 39731115  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgat 140  Q
    ||| |||||||||  |||||  | ||||||||||||||    
T  39731116 gtcgtaccttgggacgtacgtaccaatcgtgacacgat 39731153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 141
Target Start/End: Complemental strand, 18392702 - 18392562
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||||  ||||||| ||| || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||    
T  18392702 aggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataagg 18392603  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||||| | |||||||  | ||||||||||||||||||||    
T  18392602 actggtcgttccttgggacggacgcaaatcgtgacacgatt 18392562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 21811820 - 21811924
Alignment:
Q  5 tgccgtgagcta-gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggact 103  Q
    |||||||||| | ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  |||||||||||    
T  21811820 tgccgtgagcaatgtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggact 21811919  T
Q  104 ggtca 108  Q
    |||||    
T  21811920 ggtca 21811924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 24265770 - 24265862
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  24265770 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 24265862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 31109164 - 31109251
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggact 103  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||   |||||||||||    
T  31109164 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggact 31109251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 46516069 - 46516179
Alignment:
Q  201 ggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcac 300  Q
    |||||||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||| ||||||  ||||||||||| |||    
T  46516069 ggagcttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgagttggg--aaacattgtaaacac 46516166  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  46516167 cttgggtagtgag 46516179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 12406585 - 12406513
Alignment:
Q  233 gagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12406585 gagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 12406513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 141
Target Start/End: Complemental strand, 1562479 - 1562369
Alignment:
Q  31 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatc 130  Q
    |||||||| |||||| |||| |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | ||||| |  | |||||||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtgacggacgcaaatc 1562380  T
Q  131 gtgacacgatt 141  Q
    |||||||||||    
T  1562379 gtgacacgatt 1562369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 2479662 - 2479559
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||| ||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  2479662 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttatagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 2479565  T
Q  308 agtgag 313  Q
    ||||||    
T  2479564 agtgag 2479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 23402784 - 23402887
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23402784 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23402881  T
Q  308 agtgag 313  Q
    ||||||    
T  23402882 agtgag 23402887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 24260929 - 24261006
Alignment:
Q  31 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  24260929 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 24261006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 141
Target Start/End: Complemental strand, 18389246 - 18389126
Alignment:
Q  21 gcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttg 120  Q
    ||||| ||| || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||||  |    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18389147  T
Q  121 tacgcaaatcgtgacacgatt 141  Q
     ||||||||||||||||||||    
T  18389146 gacgcaaatcgtgacacgatt 18389126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 12397385 - 12397287
Alignment:
Q  43 gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||     |||||||||||||||||||    
T  12397385 gatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtgacacgattt 12397287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 16880569 - 16880475
Alignment:
Q  14 ctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||||| ||| || |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  16880569 ctagtttgctggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca 16880475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 14 - 108
Target Start/End: Complemental strand, 16885424 - 16885330
Alignment:
Q  14 ctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||||| ||| || |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  16885424 ctagtttgctggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca 16885330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 20284415 - 20284312
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  20284415 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 20284318  T
Q  308 agtgag 313  Q
    ||||||    
T  20284317 agtgag 20284312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 21989231 - 21989131
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   ||| |||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||    
T  21989231 gagagaaacttggattacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagt 21989134  T
Q  311 gag 313  Q
    |||    
T  21989133 gag 21989131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 25767463 - 25767381
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    ||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||   |||||||||||||||||    
T  25767463 tgccgtgagctggtttgcagggtgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagt 25767381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 44847896 - 44847999
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||| |    
T  44847896 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggat 44847993  T
Q  308 agtgag 313  Q
    ||||||    
T  44847994 agtgag 44847999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 208 - 372
Target Start/End: Complemental strand, 47263992 - 47263833
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||| |||||||| |||   |||||||||||||||||||| |||  |||||| |||||||  |||||||||||  |||||||||    
T  47263992 agagagagaaacttggattataaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttcggttggg--aaacattgtaaataccttgggt 47263895  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||  ||||||||||||    
T  47263894 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttct-atttagggttcat 47263833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 2580717 - 2580613
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||| ||||||||| |||   |||||||||||||||||| | |||  |||||||||||||  |||||||||||| ||||||||    
T  2580717 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgt-gtgaggttctcttgggttgg--aaaacattgtaaacaccttgg 2580621  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  2580620 gtagtgag 2580613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 2647466 - 2647571
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||| ||||||||||  |||   |||||||||||||||||||| |||  ||||||||||||||  |||||| |||| ||||||||    
T  2647466 ttagagagagaaacttggactacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacatggtaagcaccttgg 2647563  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  2647564 gtagtgag 2647571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 211 - 313
Target Start/End: Original strand, 4796443 - 4796542
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   | |||||||||||||||||| |||  |||||||||||||  |||||||||||| |||||||||||||    
T  4796443 gagagaaacttggattacaaaggaggtaacttta-ggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggtagt 4796539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 3047581 - 3047477
Alignment:
Q  208 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||||||||||| ||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||| | |||||| ||||||    
T  3047581 agagagagaaacttgggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacactataatcatcttggg 3047484  T
Q  307 tagtgag 313  Q
    |||||||    
T  3047483 tagtgag 3047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 9189775 - 9189881
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtg-tctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttg 304  Q
    ||||||||||||||||||||| ||||||||  |||   ||||||||||| |||||||||  ||  ||||||||||||||  ||||||||||| |||||||    
T  9189775 ttagagagagaaacttggattgcaaaggagataactttagggttgagtgttctttgtagtaaggttctcttgggttggg--aaacattgtaaacaccttg 9189872  T
Q  305 ggtagtgag 313  Q
    |||||||||    
T  9189873 ggtagtgag 9189881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 9184943 - 9185048
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||||||||||||| | |||| ||||||||| |||   |||||||||| |||||||||  ||  ||||||||||||||  ||||||||||| ||||||||    
T  9184943 ttagagagagaaacattgattgcaaaggaggtaactttagggttgagtatctttgtagtaaggttctcttgggttggg--aaacattgtaaacaccttgg 9185040  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  9185041 gtagtgag 9185048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 33332221 - 33332324
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||| ||||||||||||||||||||||| |||   |||||||||||| |||||||  ||  |||||||||||  || ||||||||||| || |||||||    
T  33332221 agagatagaaacttggattacaaaggaggtaactttagggttgagtgtttttgtagtaaggttctcttgggtt--gagaaacattgtaaacatcttgggt 33332318  T
Q  308 agtgag 313  Q
    ||||||    
T  33332319 agtgag 33332324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 307
Target Start/End: Complemental strand, 49092015 - 49091918
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   | |||||||||||||||||  |||  | ||||||||||||  |||||||| || ||||||||||    
T  49092015 agagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtactgaggatatcttgggttggg--aaacattgaaaacaccttgggt 49091918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 169
Target Start/End: Complemental strand, 12406634 - 12406591
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgt 169  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  12406634 aaatcgtggcacgatttcttcagaggaagactagtatatattgt 12406591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 2479877 - 2479757
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| || ||||||||| |||||| ||| |||||||| ||||||||   ||||||| | ||||||| | |  |||||||  ||    
T  2479877 tgccgtgagctggtttgcagggtgtcaaatcgtgtcacgattttgtgaaatcgttacacgattttcaaacttgttggttaagttttcaggataagg-ttg 2479779  T
Q  105 gtcataccttgggttgtacgca 126  Q
    ||| |||||||||| |||||||    
T  2479778 gtcgtaccttgggtcgtacgca 2479757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 29160140 - 29160028
Alignment:
Q  202 gagcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatc 298  Q
    |||||| ||||||||||||||| | ||||||||||| |||    ||||||||||||||| ||| |||  |||||||  ||||||||||  |||||||| |    
T  29160140 gagctttgagagagaaacttgggaatacaaaggaggtaacttttgggttgagtgtctttatagtgaggttctcttgagggttgggaaa--cattgtaaac 29160043  T
Q  299 accttgggtagtgag 313  Q
    |||||||||||||||    
T  29160042 accttgggtagtgag 29160028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 5817036 - 5817144
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacct 302  Q
    |||||||||||||||||||| | ||||||||||| |||   | |||||||||||||||||| |||  ||| || |||||||  |||||||||||  ||||    
T  5817036 gcttagagagagaaacttgggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctatttggttggg--aaacattgtaaatacct 5817133  T
Q  303 tgggtagtgag 313  Q
    |||| ||||||    
T  5817134 tggggagtgag 5817144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 282
Target Start/End: Complemental strand, 79714 - 79640
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    ||||||||||||||||||||||||||||| |||   | | |||||||||||||||| |||  ||| |||||||||    
T  79714 agagagagaaacttggattacaaaggaggtaactttaagattgagtgtctttgtagtgaggatcttttgggttgg 79640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 126 - 165
Target Start/End: Original strand, 24024042 - 24024081
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatata 165  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  24024042 aaatcgtggcacgatttcttcaggggaagactagtatata 24024081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 47264181 - 47264102
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    |||||||| ||||| ||| || ||||||||||||| ||  || |||||||||||||||||   ||||||||| |||||||    
T  47264181 cgtgagctggtttgtagggtgtcaaatcgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagt 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 21812099 - 21812143
Alignment:
Q  263 gagagtgtctcttgggttggg-aaaaacattgtaatcaccttggg 306  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||    
T  21812099 gagagtgtttcttaggttggggaaaaacattgtaatcaccttggg 21812143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 2 - 375
Target Start/End: Original strand, 33037366 - 33037738
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  33037366 aggtgccgtgagctagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataagga 33037465  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag 201  Q
    |||||||| ||||||   | |||||||||||||||||||| ||||||| | |||||||||||||||||||| ||||||   |||| | ||||||||| |     
T  33037466 ctggtcatgccttggaacggacgcaaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgcttttttgaaggagagcttggaa 33037565  T
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33037566 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 33037665  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  33037666 ttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctc-tttagggttcatatt 33037738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 18852705 - 18853098
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  18852705 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagg 18852804  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    ||||||||||||||||||   ||||| |||||||||||||||                   |||||||||||||||||||||||||||||| ||||||      
T  18852805 actggtcataccttgggtcagacgcagatcgtgacacgatttggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgctt 18852904  T
Q  182 atttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
     |||| | ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  18852905 ttttgaaggagagcttggaagagcttagagagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttg 18853004  T
Q  282 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18853005 ggaaaaatattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 18853098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 2 - 375
Target Start/End: Original strand, 4759613 - 4760006
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4759613 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataagga 4759712  T
Q  102 ctggtcataccttgggttgtacgcaaat-------------------cgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcaga 182  Q
    |||||||||||||||   | ||||||||                   ||||||||||||||||||||||||||||||||||||||||||| ||||||       
T  4759713 ctggtcataccttggaacggacgcaaatcgtgacacgatctggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcttg 4759812  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    |||| | ||||||||| | |||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  4759813 tttgaaggagagcttggaagagcttagagagagaatcttggattgcaaaggaggtaaccaaagggttgagtgtctttgtagagagagtctcttgggttgg 4759912  T
Q  283 g-aaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4759913 gaaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 4760006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 30656204 - 30655812
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30656204 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 30656105  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtgcag 181  Q
    |||||||| |||||||||   ||||||||||||||||||| |                   |||||||||||||||||||||||||||||| |||||       
T  30656104 actggtcaaaccttgggtcagacgcaaatcgtgacacgatctggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgttt 30656005  T
Q  182 atttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttg 281  Q
     |||| | ||||||||| | ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30656004 ttttgaaggagagcttggaagagcttaaagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttg 30655906  T
Q  282 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  30655905 ggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 30655812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 375
Target Start/End: Original strand, 18870106 - 18870492
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||||    
T  18870106 cgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtc 18870205  T
Q  108 ataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtgcagatttgta 188  Q
    |||||||||||   ||||| |||||||||||||||                   |||||||| ||||||||||||||||||||| ||||||   |||| |    
T  18870206 ataccttgggtcagacgcagatcgtgacacgatttgaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgcttttttgaa 18870305  T
Q  189 agagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaa 288  Q
     ||||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18870306 ggagagcttggaagagcttagagagagaaacatggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 18870405  T
Q  289 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18870406 cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 18870492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 10688677 - 10689073
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||    
T  10688677 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataagg 10688776  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt---------------------tcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||| |||| |||||||||   | ||||||||||||||||||                     ||||||||||||||||||||||||||||||| ||||||    
T  10688777 acttgtca-accttgggtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc 10688875  T
Q  180 agatttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggt 279  Q
    || |||| ||||||||||| | ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10688876 agttttgaaagagagcttggaagagctaagaaagagaaacttggataacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggt 10688975  T
Q  280 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattagtt--ggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  10688976 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttgggggaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 10689073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 2 - 375
Target Start/End: Complemental strand, 36979935 - 36979543
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||    
T  36979935 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataagga 36979836  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgaca-------------------cgatttcttcagaggaagactagtatatattgtgttattgtg--ca 180  Q
    |||||||||||||||||||||||||||||||||||                   ||||| |||||||||||| ||||||| ||  ||||| |||||  |     
T  36979835 ctggtcataccttgggttgtacgcaaatcgtgacacgatctggaaatcgtggcacgattgcttcagaggaaggctagtatttaa-gtgttcttgtgttct 36979737  T
Q  181 gatttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggtt 280  Q
      |||| |  |||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  36979736 tttttggagaagagcttggaagagcttagagagagaaacttggattacaaagaagggaaccaaagggttgagtgtctttgtagagagtgtctcttaggtt 36979637  T
Q  281 gggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  36979636 gggaaaa-cattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 36979543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 6311857 - 6311476
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||    
T  6311857 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataagg 6311758  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt---------------------tcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||| |||| |||||||||   | ||||||||||||||||||                     ||||||||||||||||||||||||||||||| ||||||    
T  6311757 acttgtca-accttgggtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc 6311659  T
Q  180 agatttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggt 279  Q
       ||||  |||||||||| | ||||||||||| |||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6311658 ttttttgagagagagcttggaagagcttagagatagaa-cttggatagcaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggt 6311560  T
Q  280 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctctttt 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  6311559 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatcaaaagcttcctctagtgacttctctttt 6311476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 5 - 375
Target Start/End: Original strand, 1261497 - 1261886
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  1261497 tgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactg 1261596  T
Q  105 gtcataccttgggttgtacg--caaatcg-------------------tgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagat 183  Q
    |||||||||||||   ||||  |||||||                   |||||||||||  |||||||||| ||||||| ||  ||||| ||||||   |    
T  1261597 gtcataccttgggacatacgttcaaatcgtgacacgatctggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgctttt 1261696  T
Q  184 ttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggg 283  Q
    ||| | ||||||||| | |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||    
T  1261697 ttgaaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggg 1261796  T
Q  284 aaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||||||||||||| || ||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1261797 aaaaacattgtaatcaccttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 1261886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 10 - 307
Target Start/End: Original strand, 7289515 - 7289831
Alignment:
Q  10 tgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcat 109  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |    
T  7289515 tgagctagtttgcaggacgccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-t 7289613  T
Q  110 accttgggttgtacgcaaatcgtga---------------------cacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgta 188  Q
    ||||||| |   | |||||||||||                     |||||||||||||||||||||||||||||||||||||| ||||||   |||| |    
T  7289614 accttggatcagatgcaaatcgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaa 7289713  T
Q  189 agagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaa 288  Q
    |||||||||| | |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  7289714 agagagcttggaagagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaa 7289812  T
Q  289 cattgtaatcaccttgggt 307  Q
    |||||||||||||||||||    
T  7289813 cattgtaatcaccttgggt 7289831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 26288226 - 26288055
Alignment:
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    |||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  26288226 gagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacacc 26288127  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| || ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  26288126 ttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 26288055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 26301483 - 26301312
Alignment:
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    |||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  26301483 gagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacacc 26301384  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| || ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  26301383 ttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 26301312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 26313477 - 26313306
Alignment:
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    |||||||||||||||||||||||||||||||| ||||||   |||||||| |||||||||||||||  ||||||| ||||||||||||||||||| ||||    
T  26313477 gagcttagagagagaaacttggattacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacacc 26313378  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| || ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  26313377 ttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 26313306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 10683817 - 10683924
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  10683817 aaggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataagg 10683916  T
Q  101 actggtca 108  Q
    ||||||||    
T  10683917 actggtca 10683924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 25689621 - 25689759
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||  ||||||||||| |||||||   |||||||||||||||||||||||||||||||||    
T  25689621 ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgttaagtatccttgataaggac 25689720  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||| | |||||| |||||| |||||||||||||||||    
T  25689721 tggtcgttccttggtttgtacacaaatcgtgacacgatt 25689759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 25327750 - 25327858
Alignment:
Q  9 gtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||    
T  25327750 gtgagctagtttgcaggacgccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca 25327849  T
Q  109 taccttgggt 118  Q
     |||||||||    
T  25327850 -accttgggt 25327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 3439168 - 3439305
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| |||||||| |||||| ||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  3439168 ggtgccgtgagctaggttgcagggtgcaaaatcgtgacacgat-ttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 3439266  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||| |  ||||||| ||||||| |||||| |||||||    
T  3439267 tggtcgtttcttgggtggtacgcatatcgtggcacgatt 3439305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 247 - 375
Target Start/End: Original strand, 31071035 - 31071161
Alignment:
Q  247 gttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcct 346  Q
    ||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||| || ||||  | |||||||||| | |||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtga-gatttcacca-ttggaaggatcttaagcttcct 31071132  T
Q  347 ctagtgtcttctcttttagggttcatatt 375  Q
    || ||||||||||||||||||||||||||    
T  31071133 cttgtgtcttctcttttagggttcatatt 31071161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 39784403 - 39784510
Alignment:
Q  2 aggtgccgtgagcta-gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  ||||||||    
T  39784403 aggtgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataagg 39784502  T
Q  101 actggtca 108  Q
    ||||||||    
T  39784503 actggtca 39784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 15290250 - 15290406
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||  | |||||||  | |||||||    
T  15290250 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacggacgcaaa 15290349  T
Q  129 tcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    |||||||||||||    ||||||||||||||||  ||  ||||| |||||||||||||    
T  15290350 tcgtgacacgattggaacagaggaagactagtactta-agtgttcttgtgcagatttg 15290406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 30 - 186
Target Start/End: Original strand, 15470619 - 15470775
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||  | |||||||  | |||||||    
T  15470619 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacggacgcaaa 15470718  T
Q  129 tcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    |||||||||||||    ||||||||||||||||  ||  ||||| |||||||||||||    
T  15470719 tcgtgacacgattggaacagaggaagactagtactta-agtgttcttgtgcagatttg 15470775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 42575802 - 42575690
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  42575802 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggacggacgcaaa 42575703  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  42575702 tcgtgacacgatt 42575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 7412666 - 7412563
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||  ||||||||||||||  ||||||||||| ||||||||||    
T  7412666 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacaccttgggt 7412569  T
Q  308 agtgag 313  Q
    ||||||    
T  7412568 agtgag 7412563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 26288434 - 26288324
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| |||   ||||||||||||||||| ||| ||||||||||||    
T  26288434 tgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactg 26288335  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  26288334 gtcgtaccttg 26288324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 26301691 - 26301581
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| |||   ||||||||||||||||| ||| ||||||||||||    
T  26301691 tgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactg 26301592  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  26301591 gtcgtaccttg 26301581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 26313685 - 26313575
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||| |||   ||||||||||||||||| ||| ||||||||||||    
T  26313685 tgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactg 26313586  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  26313585 gtcgtaccttg 26313575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 35745870 - 35745793
Alignment:
Q  31 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  35745870 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtca 35745793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 208 - 372
Target Start/End: Complemental strand, 4456354 - 4456195
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||| ||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  4456354 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctctgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 4456257  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | || |||||||  |||||||||| | |||||||||| ||||||||||||    
T  4456256 agtga-gatttcacca-ttagaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 4456195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 126 - 307
Target Start/End: Original strand, 25327887 - 25328058
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtaggagcttagagagagaaacttggat 225  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||   |||| |  ||| |||          |||||||||| ||||||     
T  25327887 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagaagaactta---------agagagagaa-cttggag 25327976  T
Q  226 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
      ||||||||||| || | |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25327977 atcaaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 25328058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 211 - 361
Target Start/End: Original strand, 19175528 - 19175674
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||| |||||  ||||||||||| |||||||||||||    
T  19175528 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttggattggg--aaacattgtaaacaccttgggtagt 19175625  T
Q  311 gaggagttcattagttggaaggatttaaagcttcctctagtgtcttctctt 361  Q
    || || |||| || ||||||||||  |||| ||||| | ||||||||||||    
T  19175626 ga-gatttcacta-ttggaaggatcaaaagtttccttttgtgtcttctctt 19175674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 4696379 - 4696482
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||  |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  4696379 agagagagaaacttggattacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 4696476  T
Q  308 agtgag 313  Q
    ||||||    
T  4696477 agtgag 4696482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 5702251 - 5702354
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||| ||||||| ||||||||||    
T  5702251 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaatattgtaaacaccttgggt 5702348  T
Q  308 agtgag 313  Q
    ||||||    
T  5702349 agtgag 5702354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 2627403 - 2627503
Alignment:
Q  7 ccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggt 106  Q
    ||||||||| ||||||| | |||||||||||| |||||| |||||||||||||||||||||   ||||||||||||||||| ||| ||||||||| ||||    
T  2627403 ccgtgagctggtttgcatggtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggt 2627502  T
Q  107 c 107  Q
    |    
T  2627503 c 2627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 25328105 - 25328184
Alignment:
Q  228 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||| || | |||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  25328105 caaaggagggatcctatgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 25328184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 208 - 309
Target Start/End: Original strand, 23799347 - 23799446
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||||||  ||||||||||||||   |||||||||| ||||||| ||    
T  23799347 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttgggttggg--gaacattgtaaacaccttgagt 23799444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 126 - 306
Target Start/End: Original strand, 39784548 - 39784728
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagcttagagagagaaa-cttgg 223  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||   |||| |||||| | |  || ||||||| ||||||||| |||||    
T  39784548 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttg-aagagaaccttaagagagctta-agagagaaatcttgg 39784645  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  ||||| ||||||| ||||||||||||||||||||||||||||||    
T  39784646 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtctcttaggttgggaaaaacattgtaatcaccttggg 39784728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 19752163 - 19752268
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||  ||||||||| |||   |||||||||||||||||||| |||  |||||||||||| |  ||| ||||||| ||||||||    
T  19752163 ttagagagagaaacttggatcgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgtg--aaatattgtaaacaccttgg 19752260  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  19752261 gtagtgag 19752268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 7412869 - 7412787
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    ||||||||||| ||||||||| || |||||||||| || || ||| |||||||||||||||||   ||||||||| |||||||    
T  7412869 tgccgtgagctggtttgcagggtgtcaaatcgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 3051447 - 3051343
Alignment:
Q  208 agagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||||||||||| | || ||||||| ||||   |||||||||||||||||||| | |  ||||||| ||||||  ||||||||||| || ||||||    
T  3051447 agagagagaaacttgggactataaaggagagaactttagggttgagtgtctttgtagtggggttctcttgagttggg--aaacattgtaaacatcttggg 3051350  T
Q  307 tagtgag 313  Q
    |||||||    
T  3051349 tagtgag 3051343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 28307889 - 28307785
Alignment:
Q  208 agagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||||||||| ||||||||||||||| |||   || |||||||||||||||||   |  |||||| |||||||  ||||||||| | |||||||||    
T  28307889 agagagagaaacttaggattacaaaggaggtaactttagagttgagtgtctttgtagcacggttctcttaggttggg--aaacattgttaacaccttggg 28307792  T
Q  307 tagtgag 313  Q
    |||||||    
T  28307791 tagtgag 28307785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 31043017 - 31043080
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 115  Q
    |||||||||||||||||  ||||||||||||||||| |||  ||||||||| |||| |||||||    
T  31043017 aaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttg 31043080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 9054231 - 9054294
Alignment:
Q  248 ttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |||||||| ||||||| |||  |||||||||||||  |||||||| ||||||||||||||||||||    
T  9054231 ttgagtgtttttgtagtgagattctcttgggttgg--aaaacattataatcaccttgggtagtgag 9054294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 26403034 - 26403103
Alignment:
Q  244 agggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  26403034 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 26403103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 31042989 - 31043031
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgat 45  Q
    ||||||||||||| ||||||||| |||||||||||| ||||||    
T  31042989 ggtgccgtgagctggtttgcagggtgccaaatcgtgacacgat 31043031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 9765617 - 9765720
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttgggaaaaacattgtaatcac 300  Q
    |||| ||||||||||||||| | ||||||||||| |||   ||||||||||||||||| || |||  ||||||  ||||||||  ||||||||||| |||    
T  9765617 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttg-agtgaggttctcttgagggttggg--aaacattgtaaacac 9765713  T
Q  301 cttgggt 307  Q
    |||||||    
T  9765714 cttgggt 9765720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 2 - 375
Target Start/End: Original strand, 24786904 - 24787295
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24786904 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 24787003  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgattt-------------------cttcagaggaagactagtatatattgtgttattgtgcaga 182  Q
    ||||||| |||||||||   ||||||||||||||||||| |                   |||||||||||||||||||||||||||||| ||||||       
T  24787004 ctggtcaaaccttgggtcagacgcaaatcgtgacacgatctggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttt 24787103  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    |||| | ||||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24787104 tttgaaggagagcttggaagagcttagagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgg 24787202  T
Q  283 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24787203 gaaaaacattataatcaccttgggcagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 24787295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 5 - 375
Target Start/End: Original strand, 19360995 - 19361364
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||| |||  ||||||||| |    
T  19360995 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacag 19361094  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcaga-tttgtaagagagcttgtag 201  Q
    ||| ||||||| |  |||||  | ||||||||||||||||  |||| ||||||||||||| ||  ||||| ||||||||| |||| | ||||||||| |     
T  19361095 gtcgtaccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaagactagtattta-agtgttcttgtgcagattttggaggagagcttggaa 19361193  T
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    |||||||||||||||||||| ||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||||| |||||||||||| ||||    
T  19361194 gagcttagagagagaaacttagattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg-aaaacattgtaaacacc 19361292  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| || ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  19361293 ttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19361364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 126 - 375
Target Start/End: Original strand, 24202455 - 24202701
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtaggagcttagagagagaaacttggat 225  Q
    ||||||||||||||||   |||||||||| ||||||| ||  ||||| ||||||| ||||   |||||||||| | ||||||||||||||||||||||||    
T  24202455 aaatcgtgacacgattgtatcagaggaaggctagtatttaa-gtgttcttgtgcatattttggagagagcttggaagagcttagagagagaaacttggat 24202553  T
Q  226 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagt 325  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||  | |    
T  24202554 tacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtga-gatctcacca-t 24202651  T
Q  326 tggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  24202652 tggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 24202701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 5 - 375
Target Start/End: Original strand, 19365851 - 19366240
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||| | |||  ||||||||| |    
T  19365851 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaattttccaggataaggacag 19365950  T
Q  105 gtcataccttgggttgtacg--caaatcgtg-------------------acacgatttcttcagaggaagactagtatatattgtgttattgtgcaga- 182  Q
    ||| ||| ||| |  |||||  | |||||||                   |||||||||  |||| ||||||||||||| ||  ||||| |||||||||     
T  19365951 gtcgtacattgtgacgtacgtaccaatcgtgacacgacttggaaatcgtgacacgattttatcagtggaagactagtattta-agtgttcttgtgcagat 19366049  T
Q  183 tttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgg 282  Q
    |||| | ||||||||| | |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  |||||||||||||    
T  19366050 tttggaggagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgg 19366149  T
Q  283 gaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||| ||||||| ||||||||||||||| || ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  19366150 gaaaaatattgtaaacaccttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19366240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 140
Target Start/End: Original strand, 24793726 - 24793864
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24793726 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 24793825  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgat 140  Q
    ||||||| |||||||||   |||||||||||||||||||    
T  24793826 ctggtcaaaccttgggtcagacgcaaatcgtgacacgat 24793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 127 - 375
Target Start/End: Original strand, 19358530 - 19358775
Alignment:
Q  127 aatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt-gtaagagagcttgtaggagcttagagagagaaacttggat 225  Q
    ||||||||||||||||  |||| ||||||||||||| ||  ||||| |||||||||||| | | ||||||||| | ||||||||||||||||||||||||    
T  19358530 aatcgtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagattttggaggagagcttggaagagcttagagagagaaacttggat 19358628  T
Q  226 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagt 325  Q
    |||||||||||||||   |||||||||||||||||||| |||  ||| |||||||||| |||||||||||| ||||||||||||||| || ||||  | |    
T  19358629 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatcttttgggttggg-aaaacattgtaaacaccttgggtagtga-gatttcacca-t 19358725  T
Q  326 tggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  19358726 tggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19358775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 20622740 - 20622601
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    |||||||||||||||| |||||| |||||||||||| ||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  20622740 ggtgccgtgagctagtctgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggac 20622641  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    |||||||||||||||| |||||||||||||| || |||||    
T  20622640 tggtcataccttgggtggtacgcaaatcgtggcatgattt 20622601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 41398759 - 41398656
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  41398759 tgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcattgataaggactg 41398660  T
Q  105 gtca 108  Q
    ||||    
T  41398659 gtca 41398656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 1054592 - 1054699
Alignment:
Q  2 aggtgccgtgagcta-gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  1054592 aggtgccgtgagccaagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataagg 1054691  T
Q  101 actggtca 108  Q
    ||||||||    
T  1054692 actggtca 1054699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 41391104 - 41391001
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||    
T  41391104 tgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactg 41391005  T
Q  105 gtca 108  Q
    ||||    
T  41391004 gtca 41391001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 5 - 185
Target Start/End: Original strand, 51765073 - 51765254
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| | |||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  51765073 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 51765172  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    ||||||||||| |  |||||  | ||||||||||||||||  |||| ||||| ||||||| ||  ||||| ||||||||||||    
T  51765173 gtcataccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaaggctagtattta-agtgttcttgtgcagattt 51765254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 307
Target Start/End: Complemental strand, 41398536 - 41398415
Alignment:
Q  187 taagagagcttgtaggagctta-gagagagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttggga 284  Q
    |||||||||||||| ||||||  ||||||||| |||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  41398536 taagagagcttgtatgagcttttgagagagaa-cttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttgggttggga 41398438  T
Q  285 aaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||    
T  41398437 aaaacattgtaatcaccttgggt 41398415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 44203296 - 44203436
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||||  |||||||    |||||||||||||||| | || ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44203296 aggtgccgtgagctagggttgcaggggtgcaaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataagg 44203395  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||||| | |||||||  | ||||||||||||||||||||    
T  44203396 actggtcgttccttgggacggacgcaaatcgtgacacgatt 44203436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 44023455 - 44023562
Alignment:
Q  2 aggtgccgtgagcta-gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  44023455 aggtgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataagg 44023554  T
Q  101 actggtca 108  Q
    ||||||||    
T  44023555 actggtca 44023562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 307
Target Start/End: Complemental strand, 41390881 - 41390760
Alignment:
Q  187 taagagagcttgtaggagctta-gagagagaaacttggattacaaaggagggaaccaaaggg-ttgagtgtctttgtagagagtgtctcttgggttggga 284  Q
    |||||||||||||| ||||||  ||||||||| |||||||  ||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  41390881 taagagagcttgtatgagcttttgagagagaa-cttggatagcaaaggagggaaccaaatggattgagtgtctttgttgagagtgtctcttgggttggga 41390783  T
Q  285 aaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||    
T  41390782 aaaacattgtaatcaccttgggt 41390760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 25439492 - 25439584
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||    
T  25439492 agtttgcaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtca 25439584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 39445989 - 39445897
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  39445989 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtca 39445897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 13604393 - 13604552
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||   |||||||||| ||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  13604393 agagagagaaacttggattacaaaggagggaactttagggttgagtatctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 13604490  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||| ||||||||||||    
T  13604491 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 13604552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 40282039 - 40282154
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||  ||| ||||||||||||||||  | ||||||||||||||||| ||| |||||||||    
T  40282039 ggtgccgtgagctaggttgcagggtgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 40282138  T
Q  102 ctggtcataccttggg 117  Q
    ||||||||||||||||    
T  40282139 ctggtcataccttggg 40282154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 141
Target Start/End: Original strand, 9036083 - 9036221
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| || ||||| ||| || |||  |||||||||||||||   |||||||||||||||||||||||||||||||||    
T  9036083 ggtgccgtgagctaggttgcagggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 9036182  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||| |  |||||||  |||||| ||||||||||||||    
T  9036183 tggtcgtttcttgggtgttacgcagatcgtgacacgatt 9036221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 9986866 - 9986980
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||| || |||||  |||||||||||| |||||| |||||||||||||||||||||   ||||||||||||||||| ||| | ||||||||    
T  9986866 ggtgccgtgagctggtctgcagtgtgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggac 9986965  T
Q  103 tggtcataccttggg 117  Q
    |||||||||||||||    
T  9986966 tggtcataccttggg 9986980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 25444685 - 25444777
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||  ||||||||||||||||    
T  25444685 agtttgtaggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtca 25444777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 47098594 - 47098699
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||    
T  47098594 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagcgaggttctcttgggttggg--aaacattgtaaacaccttgg 47098691  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  47098692 gtagtgag 47098699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 47102608 - 47102713
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||    
T  47102608 ttagagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 47102705  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  47102706 gtagtgag 47102713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 43988042 - 43988134
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || |||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  43988042 agtttgctggaagcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 43988134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 21053620 - 21053733
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctcgttaagtatccttgataagga 101  Q
    ||||| |||||||||  |||| | |||||||||||| ||||||  ||||||||||||||||||||  | ||||||||||||||||| ||| |||||||||    
T  21053620 ggtgcagtgagctagaatgcaaggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 21053719  T
Q  102 ctggtcataccttg 115  Q
    ||||||||||||||    
T  21053720 ctggtcataccttg 21053733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 27104171 - 27104275
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   | |||||||||||||||||| ||| |||||||||||||||  ||||||| ||| ||||||||    
T  27104171 ttagagagagaaacttggattacaaaggaggtaactttaaggttgagtgtctttgtagtgag-gtctcttgggttggg--aaacattataagcaccttgg 27104267  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  27104268 gtagtgag 27104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 29652137 - 29652036
Alignment:
Q  210 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtag 309  Q
    ||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||| ||||||||||  ||||||||||| ||||||||||||    
T  29652137 agagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttggg--aaacattgtaaacaccttgggtag 29652040  T
Q  310 tgag 313  Q
    ||||    
T  29652039 tgag 29652036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 361
Target Start/End: Complemental strand, 3282030 - 3281884
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    ||||||||||||||||||||| |||| |||   | |||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||    
T  3282030 gagagaaacttggattacaaatgaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagt 3281933  T
Q  311 gaggagttcattagttggaaggatttaaagcttcctctagtgtcttctctt 361  Q
    || || ||||  | ||||||||||  |||||||||| | ||||||||||||    
T  3281932 ga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctt 3281884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 361
Target Start/End: Original strand, 21536344 - 21536490
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||| ||||||  |||||||||||| |||||||||||||    
T  21536344 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttaggttgg--aaaacattgtaaacaccttgggtagt 21536441  T
Q  311 gaggagttcattagttggaaggatttaaagcttcctctagtgtcttctctt 361  Q
     | || ||||  | ||||||||||  |||||||||| | ||||||||||||    
T  21536442 -aagatttcacca-ttggaaggatcgaaagcttccttttgtgtcttctctt 21536490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 37070093 - 37069943
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   | |||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||| |    
T  37070093 agagagagaaacttggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggat 37069996  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttt 362  Q
    | ||| || ||||  | ||||||||||  |||||||||| | |||||||||||||    
T  37069995 aatga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt 37069943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 32889766 - 32889661
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||| ||||||||| |||   |||||||||||||||||||| |||  | | ||||||||||  ||||||||||| ||||||||    
T  32889766 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttgggttggg--aaacattgtaaacaccttgg 32889669  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  32889668 gtagtgag 32889661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 140
Target Start/End: Original strand, 24202360 - 24202450
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacacgat 140  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||||||||||||| ||||||  | |||  ||||||||||||||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgat 24202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 13598726 - 13598623
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||| ||||||||||||||||| |||   | |||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  13598726 agagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 13598629  T
Q  308 agtgag 313  Q
    ||||||    
T  13598628 agtgag 13598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 285 - 375
Target Start/End: Original strand, 19379916 - 19380004
Alignment:
Q  285 aaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||| |||||||||||||||| | ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  19379916 aaaacattgtaaacaccttgggtagtgag-atttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 19380004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 9476590 - 9476485
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||    ||||||| ||||||||||| |||  |||||| |||||||  ||||||||||| || |||||    
T  9476590 ttagagagagaaacttggattacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctctttggttggg--aaacattgtaaacatcttgg 9476493  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  9476492 gtagtgag 9476485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 361
Target Start/End: Original strand, 26644669 - 26644818
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||  ||    |||||||||||||||||||| ||   ||| ||||||||||  ||||||||||| ||||||| ||    
T  26644669 agagagagaaacttggattacaaaggagataattttagggttgagtgtctttgtagtgaagatcttttgggttggg--aaacattgtaaacaccttgagt 26644766  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctctt 361  Q
    ||||| || ||||  | ||||||||||  |||||||||| | ||||||||||||    
T  26644767 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctctt 26644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 306
Target Start/End: Original strand, 1054737 - 1054917
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagcttagagagagaaa-cttgg 223  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||   |||| |||| | | |  || ||||||| ||||||||| |||||    
T  1054737 aaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttg-aagacaaccttaagagagctta-agagagaaatcttgg 1054834  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  ||||| || |||| ||||||||||||||||||||||||||||||    
T  1054835 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 1054917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 40816580 - 40816690
Alignment:
Q  204 gcttagagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||    
T  40816580 gctttgagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 40816677  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  40816678 cttgggtagtgag 40816690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 47703699 - 47703809
Alignment:
Q  204 gcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| |||||||||||||| || ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||    
T  47703699 gctttgagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 47703796  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  47703797 cttgggtagtgag 47703809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 41390963 - 41390910
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  41390963 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 41390910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 41398618 - 41398565
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||    
T  41398618 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 41398565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 210 - 310
Target Start/End: Complemental strand, 22819756 - 22819657
Alignment:
Q  210 agagagaaacttggatt-acaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggta 308  Q
    |||||||||||||| || |||||||||| |||   ||| || ||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||    
T  22819756 agagagaaacttgggtttacaaaggaggtaactttaggatttagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggta 22819659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 19073256 - 19073151
Alignment:
Q  209 gagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||  ||||||||  ||||||||||| ||||||||    
T  19073256 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacaccttgg 19073159  T
Q  306 gtagtgag 313  Q
     |||||||    
T  19073158 atagtgag 19073151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 313
Target Start/End: Complemental strand, 19121146 - 19121041
Alignment:
Q  209 gagagagaaacttgg-attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctctt--gggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||| | ||||||||||| |||   |||||||||||||||||||| |||  ||||||  ||||||||  ||||||||||| ||||||||    
T  19121146 gagagagaaacttgggaatacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg--aaacattgtaaacaccttgg 19121049  T
Q  306 gtagtgag 313  Q
     |||||||    
T  19121048 atagtgag 19121041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 306
Target Start/End: Complemental strand, 39445859 - 39445679
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagcttagagagagaaa-cttgg 223  Q
    |||||||| |||||||||||||| | | ||||||||||||||||||| ||||||   |||| |||| | | |  || ||||||| ||||||||| |||||    
T  39445859 aaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttg-aagacaaccttaagagagctta-agagagaaatcttgg 39445762  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  ||||| || |||| ||||||||||||||||||||||||||||||    
T  39445761 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 39445679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 13604181 - 13604316
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    |||||||| ||||||||  || ||||||||| |||||| ||| | |||||||||| ||||   ||||||||| ||||||| | |  |||||||  |||||    
T  13604181 cgtgagctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggt-tggtc 13604279  T
Q  108 ataccttgggttgtacgca--aatcgtgacacgattt 142  Q
     |||||||||| ||||| |  ||||||||||||||||    
T  13604280 gtaccttgggtcgtacgtatcaatcgtgacacgattt 13604316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 25439622 - 25439675
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||| ||||||||| ||||||||| ||||||    
T  25439622 aaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc 25439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 25444815 - 25444868
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||| ||||||||| ||||||||| ||||||    
T  25444815 aaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgc 25444868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 44023600 - 44023653
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| ||| |||| |||||||||||||| ||||||    
T  44023600 aaatcgtggcacgatttcttcaggggaggactggtatatattgtgttcttgtgc 44023653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 24793886 - 24793921
Alignment:
Q  143 cttcagaggaagactagtatatattgtgttattgtg 178  Q
    |||||||||||||||||||||||||||||| |||||    
T  24793886 cttcagaggaagactagtatatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 25439758 - 25439801
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||| || |||| ||||||||||||||||||||||||||||||    
T  25439758 gagagagtttcttaggttgggaaaaacattgtaatcaccttggg 25439801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 25444951 - 25444994
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||| || |||| ||||||||||||||||||||||||||||||    
T  25444951 gagagagtttcttaggttgggaaaaacattgtaatcaccttggg 25444994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 44023736 - 44023779
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||| || |||| ||||||||||||||||||||||||||||||    
T  44023736 gagagagtttcttaggttgggaaaaacattgtaatcaccttggg 44023779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Original strand, 26644461 - 26644518
Alignment:
Q  10 tgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 67  Q
    |||||| ||||||| | || |||||||||||||||| ||| |||| ||||||||||||    
T  26644461 tgagctggtttgcacggtgtcaaatcgtggcacgattttgtgaaaacgtgacacgatt 26644518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 28220722 - 28220673
Alignment:
Q  18 tttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 67  Q
    |||||||| |||| ||||||| |||||| |||||||| ||||||||||||    
T  28220722 tttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgatt 28220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 67
Target Start/End: Complemental strand, 28223917 - 28223868
Alignment:
Q  18 tttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 67  Q
    |||||||| |||| ||||||| |||||| |||||||| ||||||||||||    
T  28223917 tttgcagggtgcccaatcgtgacacgattttgggaaaacgtgacacgatt 28223868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 3156533 - 3156589
Alignment:
Q  11 gagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 67  Q
    |||||| |||||||| |||||||||||| |||||| |||||||| | | ||||||||    
T  3156533 gagctattttgcagggtgccaaatcgtgacacgattttgggaaaacataacacgatt 3156589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 270 - 313
Target Start/End: Original strand, 16124347 - 16124388
Alignment:
Q  270 tctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |||||||||||||||||  |||||||| ||||||||||||||||    
T  16124347 tctcttgggttgggaaa--cattgtaaacaccttgggtagtgag 16124388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 24202334 - 24202374
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgat 45  Q
    ||||||||||| ||||||||| |||||||||||| ||||||    
T  24202334 tgccgtgagctggtttgcagggtgccaaatcgtgacacgat 24202374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 5 - 375
Target Start/End: Original strand, 5674312 - 5674700
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  5674312 tgccgtgagctggtttgcagggtgccaaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactg 5674411  T
Q  105 gtcataccttgggttgtacgcaaat-------------------cgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    |||||||||||||  ||||||||||                   ||||||||||||   |||||||||| ||||||| ||  ||||| ||||||||||||    
T  5674412 gtcataccttgggacgtacgcaaatcgtgacacgatctggaaatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcagattt 5674511  T
Q  186 gtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaa 285  Q
    | | ||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5674512 ggaggagagcttggaagagcttagagagataaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaa 5674611  T
Q  286 aaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5674612 aaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttagggttcatatt 5674700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 2 - 177
Target Start/End: Complemental strand, 5266593 - 5266418
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  5266593 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataagga 5266494  T
Q  102 ctggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgt 177  Q
    ||||||||||||||    | |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||    
T  5266493 ctggtcataccttgaaacggacgcaaatcgtgacacgattgcttcagaggaagactagtatattttgtgttcttgt 5266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 6 - 307
Target Start/End: Original strand, 22010272 - 22010602
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  22010272 gccgtaagttagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttg 22010371  T
Q  106 tcataccttgggttgtacgcaaatcgtgac---------------------acgatttcttcagaggaagactagtatatattgtgttattgtgcagatt 184  Q
    || ||||||||||     ||||||||||||                     |||||||||||||||| |||||||||||||||||||| ||||||   ||    
T  22010372 tc-taccttgggtccgttgcaaatcgtgacacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgcttttt 22010470  T
Q  185 tg----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
    ||          |||||||||||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  22010471 tgaagaagaacttaagagagcttgtatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 22010569  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||    
T  22010570 tgggttgggaaaaacattgtaatcaccttgggt 22010602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 6 - 307
Target Start/End: Complemental strand, 11857484 - 11857154
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||| |    
T  11857484 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttg 11857385  T
Q  106 tcataccttgggttgtacgcaaatcgtga--------------------cacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    ||| |||||||||     |||||||||||                    |||||||||||||||||||||||||||||||||||||| ||||||   |||    
T  11857384 tca-accttgggtccgttgcaaatcgtgacacgatttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgctttttt 11857286  T
Q  186 -----------gtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
                |||||||||||| | |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  11857285 actgggagaacttaagagagcttgaatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 11857187  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||    
T  11857186 tgggttgggaaaaacattgtaatcaccttgggt 11857154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 126 - 307
Target Start/End: Original strand, 14737289 - 14737482
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg-------------taagagagcttgtaggagcttagaga 212  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||   ||||             |||||||||||||| |||||| ||||    
T  14737289 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggagaaagagaacttaagagagcttgtatgagctttgaga 14737388  T
Q  213 gagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14737389 gagaa-cttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 14737482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 126 - 307
Target Start/End: Original strand, 14742149 - 14742342
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg-------------taagagagcttgtaggagcttagaga 212  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||   ||||             |||||||||||||| |||||| ||||    
T  14742149 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttggagaaagagagtttaagagagcttgtatgagctttgaga 14742248  T
Q  213 gagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||| ||||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  14742249 gagaa-cttggataacaaaggagggaaccaatgggttaagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcactttgggt 14742342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 118
Target Start/End: Original strand, 14737149 - 14737260
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  14737149 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttg 14737248  T
Q  106 tcataccttgggt 118  Q
    ||| |||||||||    
T  14737249 tca-accttgggt 14737260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 186
Target Start/End: Original strand, 27647548 - 27647729
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| |||||||||||||||  || ||||||||||||||||   ||||||||||||||||||||||||||||  |||    
T  27647548 ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgac 27647647  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    ||||| |  ||||||| ||||||| |||||||||||||| |   ||||||||||||||||| |  ||||| |||||||||||||    
T  27647648 tggtcgtttcttgggtggtacgcagatcgtgacacgattgcaatagaggaagactagtataaa--gtgttcttgtgcagatttg 27647729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 16579021 - 16578882
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||    
T  16579021 ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 16578922  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||||||| ||||||| |||||||||||||||    
T  16578921 tggtcgtttcttgggtggtacgcagatcgtgacacgattt 16578882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 16616359 - 16616498
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||    
T  16616359 ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 16616458  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||||||| ||||||| |||||||||||||||    
T  16616459 tggtcgtttcttgggtggtacgcagatcgtgacacgattt 16616498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 14742011 - 14742120
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  14742011 cgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc 14742110  T
Q  108 ataccttgggt 118  Q
    | |||||||||    
T  14742111 a-accttgggt 14742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 30125097 - 30125185
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  30125097 aggtgccgtgagctagtttgcaggacgccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 126 - 375
Target Start/End: Complemental strand, 22709420 - 22709173
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaag-agagcttgtaggagctt--agagagagaaacttg 222  Q
    |||||||||||||||||  | || ||||||||||||| ||  ||||| ||||||||||||   || |||| ||| | ||| ||  ||||||| |||||||    
T  22709420 aaatcgtgacacgattttattagtggaagactagtatttaa-gtgttcttgtgcagattttggagtagagtttggaagagtttgaagagagaaaaacttg 22709322  T
Q  223 gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatt 322  Q
    ||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||| |||||| || ||||      
T  22709321 gattacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggatagtga-gatttcacc 22709225  T
Q  323 agttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    | ||||||||||  ||| |||||||| ||||||||||||||||||||||||||    
T  22709224 a-ttggaaggatcaaaaacttcctcttgtgtcttctcttttagggttcatatt 22709173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 5 - 186
Target Start/End: Complemental strand, 2172021 - 2171839
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||| |||  ||||||||| |    
T  2172021 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacag 2171922  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    ||| ||||||| |  |||||  | ||||||||||||||||  |||| ||||| ||||||| ||  ||||| |||||||||||||    
T  2171921 gtcgtaccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaaggctagtattta-agtgttcttgtgcagatttg 2171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 16554534 - 16554673
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| || |||| ||| |||| |||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||    
T  16554534 ggtgccgtgagctaggttacagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 16554633  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||||||| ||||||| |||||||||||||||    
T  16554634 tggtcgtttcttgggtggtacgcagatcgtgacacgattt 16554673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 16631090 - 16631229
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| || |||| ||| |||| |||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||    
T  16631090 ggtgccgtgagctaggttacagggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 16631189  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||||||| ||||||| |||||||||||||||    
T  16631190 tggtcgtttcttgggtggtacgcagatcgtgacacgattt 16631229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 33342581 - 33342469
Alignment:
Q  30 caaatcgtggcacgatct-tgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    |||||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  33342581 caaatcgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 33342482  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  33342481 tcgtgacacgatt 33342469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 34166773 - 34166885
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  |||||||||    
T  34166773 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaa 34166872  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  34166873 tcgtgacacgatt 34166885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 411766 - 411881
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctcgttaagtatccttgataagga 101  Q
    |||||||||||||||| |||||| |||||||||||| ||||||  ||||||||||||||||||||  | ||||||||||||||||| ||| |||||||||    
T  411766 ggtgccgtgagctagtctgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 411865  T
Q  102 ctggtcataccttggg 117  Q
    ||||||||||||||||    
T  411866 ctggtcataccttggg 411881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 6026941 - 6027052
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    |||||||||||||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||  | ||||||||    
T  6026941 caaatcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaat 6027040  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  6027041 cgtgacacgatt 6027052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 6439005 - 6438898
Alignment:
Q  2 aggtgccgtgagcta-gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||| | |||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  6439005 aggtgccgtgagccaagtttgctggatgcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataagg 6438906  T
Q  101 actggtca 108  Q
    ||||||||    
T  6438905 actggtca 6438898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 6136439 - 6136333
Alignment:
Q  31 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatc 130  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||  | | |||||||    
T  6136439 aaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggaagcaaatc 6136340  T
Q  131 gtgacac 137  Q
    |||||||    
T  6136339 gtgacac 6136333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 22709562 - 22709452
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    |||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  22709562 tgccatgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactg 22709463  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  22709462 gtcgtaccttg 22709452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 16839237 - 16839137
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 115  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| ||||||    
T  16839237 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttg 16839139  T
Q  116 gg 117  Q
    ||    
T  16839138 gg 16839137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 6005913 - 6005821
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  6005913 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 6005821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 13150956 - 13151068
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  13150956 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 13151055  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  13151056 tcgtgacacgatt 13151068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 28155164 - 28155256
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||||    
T  28155164 agtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtca 28155256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 33330026 - 33330118
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  33330026 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33330118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 33335523 - 33335615
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  33335523 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33335615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 34164551 - 34164663
Alignment:
Q  30 caaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 128  Q
    ||||||||| |||||| |||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  34164551 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 34164650  T
Q  129 tcgtgacacgatt 141  Q
    |||||||||||||    
T  34164651 tcgtgacacgatt 34164663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 16652777 - 16652916
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||| ||| ||| || |||||| ||||| | || |||||||||||| ||   |||||||||||||||||||||||||||||||||    
T  16652777 ggtgccgtgagctaggttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgttaagtatccttgataaggac 16652876  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||||||| ||||||| |||||||||||||||    
T  16652877 tggtcgtttcttgggtggtacgcagatcgtgacacgattt 16652916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 25420904 - 25421015
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    |||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  25420904 caaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 25421003  T
Q  130 cgtgacacgatt 141  Q
    ||||||| ||||    
T  25421004 cgtgacatgatt 25421015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 5343956 - 5343879
Alignment:
Q  31 aaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  5343956 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 5343879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 3073260 - 3073148
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| || | |||| |||||||||||| ||||||  | ||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  3073260 tgccgtgagctggtctacagggtgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 3073161  T
Q  105 gtcataccttggg 117  Q
    |||||||||||||    
T  3073160 gtcataccttggg 3073148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 5757249 - 5757408
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||   ||  ||||||||||||||  ||||||||||| ||||||||||    
T  5757249 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtatttaggatctcttgggttggg--aaacattgtaaacaccttgggt 5757346  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  ||||||||||   |||||||||| ||||||||||||    
T  5757347 agtga-gatttcacca-ttggaaggatcaaaagcttccttccgtgtcttctc-tttagggttcat 5757408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 52 - 186
Target Start/End: Complemental strand, 6097877 - 6097742
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgacacgatttcttcaga 149  Q
    ||||||||||||||||   ||||||||||||||||| ||| ||||||||||||||| ||||| |||  |||||||  ||||||||||||||||  ||||     
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgattttatcagg 6097778  T
Q  150 ggaagactagtatatattgtgttattgtgcagatttg 186  Q
    ||||||||||||| ||  ||||| |||||||||||||    
T  6097777 ggaagactagtattta-agtgttcttgtgcagatttg 6097742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 31936903 - 31936798
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||| ||||||||| |||   |||||||||||||||||||| |||  ||| ||||||||||  ||||||||||| ||||||||    
T  31936903 ttagagagagaaacttggattgcaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattgggttggg--aaacattgtaaacaccttgg 31936806  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  31936805 gtagtgag 31936798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 52 - 141
Target Start/End: Original strand, 25421020 - 25421109
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||||||||| ||||    
T  25421020 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatgatt 25421109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 5572012 - 5572117
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||| ||||| |||   ||||||| |||||||||||| | |  ||||||||||||||  ||||||||||| ||||||||    
T  5572012 ttagagagagaaacttggattacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttgggttggg--aaacattgtaaacaccttgg 5572109  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  5572110 gtagtgag 5572117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 31979840 - 31979735
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||| | ||||||||| |||   |||||||||||||||||||| |||  ||| |||||||  || ||||||||||| ||||||||    
T  31979840 ttagagagagaaacttggactgcaaaggaggtaactttagggttgagtgtctttgtagtgaggttcttttgggtt--gagaaacattgtaaacaccttgg 31979743  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  31979742 gtagtgag 31979735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 5017271 - 5017370
Alignment:
Q  212 agagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtg 311  Q
    |||||||||||||||||||| |||  |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||| ||    
T  5017271 agagaaacttggattacaaacgagataactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtaatg 5017368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 31086245 - 31086348
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||| || |||   |||||||||||||||||||| |||  |||||| ||||  || ||||||||||| ||||||||||    
T  31086245 agagagagaaacttggattacaaagggggtaactttagggttgagtgtctttgtagtgaggatctcttaggtt--gagaaacattgtaaacaccttgggt 31086342  T
Q  308 agtgag 313  Q
     |||||    
T  31086343 tgtgag 31086348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 24435743 - 24435845
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||| ||||||||||||||  |||   |||||||||||||||||| | |||  ||||||| ||||||  ||||||||||| ||||||||||    
T  24435743 agagagagaaactaggattacaaaggagataactttagggttgagtgtctttgt-gtgaggttctcttgagttggg--aaacattgtaaacaccttgggt 24435839  T
Q  308 agtgag 313  Q
    ||||||    
T  24435840 agtgag 24435845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 306
Target Start/End: Original strand, 28155294 - 28155475
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagctt-agagagagaaacttgg 223  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||   |||| || | | | |  || || ||| ||||||| ||||||||    
T  28155294 aaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaaaaaaaaccttaagagaacttaagagaga-aaacttgg 28155392  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  |||||||| |||| ||||||||||||||||||||||||||||||    
T  28155393 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28155475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 22964023 - 22963922
Alignment:
Q  210 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtag 309  Q
    |||||||||||| ||||||||| |||  |||   |||||||||||||||||||| ||   |||||||| ||||||||  |||||||| ||||||||||||    
T  22964023 agagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaa--cattgtaaacaccttgggtag 22963926  T
Q  310 tgag 313  Q
    ||||    
T  22963925 tgag 22963922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 210 - 313
Target Start/End: Original strand, 23824370 - 23824471
Alignment:
Q  210 agagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtag 309  Q
    |||||||||||| ||||||||| |||  |||   |||||||||||||||||||| ||   |||||||| ||||||||  |||||||| ||||||||||||    
T  23824370 agagagaaactttgattacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttggattgggaaa--cattgtaaacaccttgggtag 23824467  T
Q  310 tgag 313  Q
    ||||    
T  23824468 tgag 23824471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 263
Target Start/End: Original strand, 10076962 - 10077017
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtag 263  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||||    
T  10076962 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtag 10077017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 208 - 283
Target Start/End: Complemental strand, 18234409 - 18234334
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttggg 283  Q
    ||||| ||||||||||||||||||||||| | |   |||||||||||||||||||| |||  ||||||||||||||    
T  18234409 agagaaagaaacttggattacaaaggaggtagctttagggttgagtgtctttgtagtgaggatctcttgggttggg 18234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 306
Target Start/End: Complemental strand, 6438860 - 6438680
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagcttagagagagaaa-cttgg 223  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||| ||||||   |||| |||| | | |  || ||||||| ||||||||| |||||    
T  6438860 aaatcgtgacacgatttcttcagggaaggactagtatatattgtgttcttgtgcttttttg-aagacaaccttaagagagctta-agagagaaatcttgg 6438763  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  ||||| || |||| ||||||||||||||||||||||||||||||    
T  6438762 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 6438680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 313
Target Start/End: Original strand, 21801108 - 21801218
Alignment:
Q  204 gcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| |||||||||||||| || ||||||| ||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||    
T  21801108 gctttgagagagaaacttgagaatacaaagcaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 21801205  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  21801206 cttgggtagtgag 21801218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 5757037 - 5757116
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    |||||| | ||||||||| || |||||||||| ||||| ||| |||||||||||||||||   ||||||||| |||||||    
T  5757037 cgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 211 - 286
Target Start/End: Original strand, 21272763 - 21272838
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaa 286  Q
    ||||||||||| ||||||||||| || |||   |||||||||||||||||||| |||  |||||||||||| ||||    
T  21272763 gagagaaactttgattacaaagggggtaactttagggttgagtgtctttgtagtgaggttctcttgggttgcgaaa 21272838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 23896871 - 23896792
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    |||||| | ||||||||| || |||||||||| ||||| ||| |||||||||||||||||   ||||||||| |||||||    
T  23896871 cgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 23896792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 307
Target Start/End: Complemental strand, 28184749 - 28184684
Alignment:
Q  245 gggttgagtgtctttgtagagagtgtctcttgggttggg---aaaaacattgtaatcaccttgggt 307  Q
    |||||||| |||||||| |||||||||||||||||| ||   |||||||| |||||||||||||||    
T  28184749 gggttgagggtctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggt 28184684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 21356318 - 21356204
Alignment:
Q  253 tgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtg 352  Q
    ||||||||||| |||  ||||||||||| |||||  |||||||| ||||||||||||||| || ||||| | ||||||| ||  |||||||||| | |||    
T  21356318 tgtctttgtagtgaggatctcttgggttaggaaa--cattgtaaacaccttgggtagtga-gatttcatca-ttggaagaatcaaaagcttccttttgtg 21356223  T
Q  353 tcttctcttttagggttcat 372  Q
    |||| || ||||||||||||    
T  21356222 tcttttc-tttagggttcat 21356204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 208 - 258
Target Start/End: Complemental strand, 23896678 - 23896628
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctt 258  Q
    ||||||||||||||||||||||||||||| |||   || ||||||||||||    
T  23896678 agagagagaaacttggattacaaaggaggtaactttagagttgagtgtctt 23896628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 16839107 - 16839054
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||||||||||||||||||||||| | | ||||||||||||  ||||| ||||||    
T  16839107 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 16839054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 5 - 371
Target Start/End: Complemental strand, 24136401 - 24136017
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  24136401 tgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactg 24136302  T
Q  105 gtcataccttgggttgtacgcaaatcgtgacacgat------------------ttct-tcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    |||||||||||||  |||||||||||||||||||||                  || | |||||||||  ||||||||||  ||||| |||||||  |||    
T  24136301 gtcataccttgggacgtacgcaaatcgtgacacgatctggaaatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgcattttt 24136202  T
Q  186 gtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaa 285  Q
    | |  |||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  24136201 ggagtagagcttggaagagctaagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaa 24136102  T
Q  286 aaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttca 371  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  24136101 aaacattgtaatcaccttgggtagtgaggagttcacca-ttggaaggatctaaagcttcctctagtgtcttctcttttagggttca 24136017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 375
Target Start/End: Complemental strand, 31180771 - 31180379
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||    
T  31180771 aaggtgtcgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataagg 31180672  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgaca---------------------cgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||   |||||||||||||||                     ||||| |||||||||||||||||||||||||||||| ||||||    
T  31180671 actggtca-accttgggtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 31180573  T
Q  180 agatttgtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggt 279  Q
       |||| |   | ||||| | |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31180572 tt-tttgaagcggggcttggaagagcttagagagagaa-cttggataacaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggt 31180475  T
Q  280 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  31180474 tgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagcttcctctagtgtcttctcttttatggttcatatt 31180379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 27450331 - 27449994
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27450331 aaggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataagg 27450232  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt--------------------cttcagaggaagactagtatatattgtgttattgtgca 180  Q
    ||||||| ||||||||||   |||||||||||||||||||||                    |||||||||||| ||||||||||||||||| ||||||     
T  27450231 actggtc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgct 27450133  T
Q  181 gattt-------------gtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagag 267  Q
      |||              |||||||||||| | |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||    
T  27450132 tttttacaaaaaaaaaacttaagagagcttgaatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagag 27450034  T
Q  268 tgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27450033 tgtctcttgggttgggaaaaacattgtaatcaccttgggt 27449994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 1 - 307
Target Start/End: Complemental strand, 27445488 - 27445150
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27445488 aaggggccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataagg 27445389  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgattt--------------------cttcagaggaagactagtatatattgtgttattgtgca 180  Q
    ||||||| ||||||||||   |||||||||||||||||||||                    |||||||||||| ||||||||||||||||| ||||||     
T  27445388 actggtc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgct 27445290  T
Q  181 gattt--------------gtaagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagaga 266  Q
      |||               |||||||||||| | |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| ||||    
T  27445289 tttttacaaaaaaaaaaacttaagagagcttgaatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgaga 27445191  T
Q  267 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  27445190 gtgtctcttgggttgggaaaaacattgtaatcaccttgggt 27445150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 126 - 375
Target Start/End: Complemental strand, 35388074 - 35387827
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt-gtaagagagcttgtaggagcttagagagagaaacttgga 224  Q
    |||||||||||||||||  |||||||||| ||||||| ||  ||||| |||||||||||| | ||||||||||| | ||||||||||||| |||||||||    
T  35388074 aaatcgtgacacgattttatcagaggaaggctagtatttaa-gtgttcttgtgcagattttggaagagagcttggaagagcttagagagaaaaacttgga 35387976  T
Q  225 ttacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattag 324  Q
    ||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||  |     
T  35387975 ttacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcaccttgggtagtga-gatttcacca- 35387878  T
Q  325 ttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  35387877 ttggaaggatctaaaacttcctctagtgtcttctcttttagggttcatatt 35387827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 6 - 307
Target Start/End: Complemental strand, 43592789 - 43592459
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43592789 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactgg 43592690  T
Q  106 tcataccttgggttgtacgcaaatcgt--------------------gacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    || ||||||||||   |||||||||||                    ||||||||| |||| ||||||| ||||||||||||||||| ||||||   |||    
T  43592689 tc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgctttttt 43592591  T
Q  186 g-----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
                |||||||||||| | |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43592590 actgggagaacttaagagagcttgaatgagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 43592492  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||    
T  43592491 tgggttgggaaaaacattgtaatcaccttgggt 43592459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 6 - 307
Target Start/End: Complemental strand, 43599234 - 43598904
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43599234 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactgg 43599135  T
Q  106 tcataccttgggttgtacgcaaatcgt--------------------gacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    || ||||||||||   |||||||||||                    ||||||||| |||||||||||| ||||||||||||||||| |||||    |||    
T  43599134 tc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgttttttt 43599036  T
Q  186 g-----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
                |||||||||||| | |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43599035 actgggagaacttaagagagcttgaatgagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 43598937  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||    
T  43598936 tgggttgggaaaaacattgtaatcaccttgggt 43598904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 6 - 307
Target Start/End: Complemental strand, 43604726 - 43604396
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43604726 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactgg 43604627  T
Q  106 tcataccttgggttgtacgcaaatcgt--------------------gacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    || ||||||||||   |||||||||||                    ||||||||| |||||||||||| ||||||||||||||||| |||||    |||    
T  43604626 tc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgttttttt 43604528  T
Q  186 g-----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
                |||||||||||| | |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43604527 actgggagaacttaagagagcttgaatgagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 43604429  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||    
T  43604428 tgggttgggaaaaacattgtaatcaccttgggt 43604396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 6 - 307
Target Start/End: Complemental strand, 43610218 - 43609888
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  43610218 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactgg 43610119  T
Q  106 tcataccttgggttgtacgcaaatcgt--------------------gacacgatttcttcagaggaagactagtatatattgtgttattgtgcagattt 185  Q
    || ||||||||||   |||||||||||                    ||||||||| |||||||||||| ||||||||||||||||| |||||    |||    
T  43610118 tc-taccttgggtcagacgcaaatcgtgacacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtgttttttt 43610020  T
Q  186 g-----------taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctct 274  Q
                |||||||||||| | |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  43610019 actgggagaacttaagagagcttgaatgagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctct 43609921  T
Q  275 tgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||    
T  43609920 tgggttgggaaaaacattgtaatcaccttgggt 43609888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 217 - 375
Target Start/End: Complemental strand, 30631730 - 30631572
Alignment:
Q  217 aacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt-gagga 315  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30631730 aacttggataacaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtggagga 30631631  T
Q  316 gttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||    
T  30631630 gttcattagttggaaggatctaaagcttcctctagtgacttctc-tttagggttcatatt 30631572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 126 - 375
Target Start/End: Complemental strand, 38219805 - 38219563
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaaga-gagcttgtaggagcttagagagagaaacttgga 224  Q
    |||||||||||| ||||  |||||||||| ||||||      ||||| ||||||||||||  |||| ||||||  | |||||||||||||||||||||||    
T  38219805 aaatcgtgacacaattttatcagaggaaggctagta------gtgttcttgtgcagattttgaagaagagctttgaagagcttagagagagaaacttgga 38219712  T
Q  225 ttacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattag 324  Q
    ||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||||||||||||||||| ||||||||||||||| || ||||  |     
T  38219711 ttacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggtagtga-gatttcacca- 38219614  T
Q  325 ttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  38219613 ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 38219563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 186
Target Start/End: Complemental strand, 22536772 - 22536591
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||||||| ||||||| ||| |||||||||||| ||  |||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  22536772 ggtgccgtgagctaggttgcagggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggac 22536673  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    ||||| |  ||||||| |||| || ||||||||||||||||  ||||||||| |||||||| |  ||||| |||||||||||||    
T  22536672 tggtcgtttcttgggtggtacacagatcgtgacacgatttcaacagaggaaggctagtataaa--gtgttcttgtgcagatttg 22536591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 1456716 - 1456852
Alignment:
Q  1 aaggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  1456716 aaggggccgtgagctagtttacaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataagg 1456815  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacg 138  Q
    ||| ||| ||||||||||   | |||||||||||||||    
T  1456816 acttgtc-taccttgggtcagatgcaaatcgtgacacg 1456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 126 - 307
Target Start/End: Complemental strand, 15045057 - 15044865
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg----------taagagagcttgtaggagcttag-agaga 214  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||   ||||          |||||||||||||| |||||| | |||||    
T  15045057 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagagcttgtatgagctttgtagaga 15044958  T
Q  215 gaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttggg-ttgggaaaaacattgtaatcaccttgggt 307  Q
    ||| |||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  15044957 gaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaaacattgtaatcaccttgggt 15044865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 191 - 307
Target Start/End: Original strand, 1456952 - 1457067
Alignment:
Q  191 agagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaca 290  Q
    |||||||| | |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  1456952 agagcttggaagagcttagagagagaa-cttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca 1457050  T
Q  291 ttgtaatcaccttgggt 307  Q
    |||||||||||||||||    
T  1457051 ttgtaatcaccttgggt 1457067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 15045198 - 15045095
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  15045198 tgccgtgagccagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactg 15045099  T
Q  105 gtca 108  Q
    ||||    
T  15045098 gtca 15045095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 52 - 142
Target Start/End: Complemental strand, 29751615 - 29751525
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattt 29751525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 30631869 - 30631763
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  30631869 aggtgccgtgagccagtttgcaggacgccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataagga 30631770  T
Q  102 ctggtca 108  Q
    |||||||    
T  30631769 ctggtca 30631763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 10 - 101
Target Start/End: Original strand, 29402637 - 29402728
Alignment:
Q  10 tgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  29402637 tgagctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 25077813 - 25077924
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    ||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  25077813 caaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 25077912  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  25077913 cgtgacacgatt 25077924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 25135782 - 25135893
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    ||||||||| ||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||  | ||||||||    
T  25135782 caaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaat 25135881  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  25135882 cgtgacacgatt 25135893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 26177549 - 26177685
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||| ||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  26177549 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 26177648  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacga 139  Q
    ||| |||||||||  | |||||  |||||||||||||    
T  26177649 gtcgtaccttgggacggacgcaccaatcgtgacacga 26177685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 10592923 - 10593062
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggac 102  Q
    ||||||||||| ||| ||||||| ||| ||||||||||||||| | || |||||||||||||||   |||||||||||||||||||||| ||||||||||    
T  10592923 ggtgccgtgagataggttgcagggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggac 10593022  T
Q  103 tggtcataccttgggttgtacgcaaatcgtgacacgattt 142  Q
    ||||| |  ||| ||| ||||||| |||||||||||||||    
T  10593023 tggtcgtttcttcggtggtacgcagatcgtgacacgattt 10593062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 29720046 - 29720161
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctcgttaagtatccttgataagga 101  Q
    |||||||||||||||| |||||| |||||||||||| ||||||  ||||||||||||||||||||  | ||||||||||||||||| ||| |||||||||    
T  29720046 ggtgccgtgagctagtctgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29720145  T
Q  102 ctggtcataccttggg 117  Q
    ||||||||||||||||    
T  29720146 ctggtcataccttggg 29720161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 372
Target Start/End: Complemental strand, 15464860 - 15464700
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||| ||| |||   |||||||||||||||||||| |||  ||||||||||||||  |||||| |||| ||||||||||    
T  15464860 agagagagaaacttggattacaaagaaggaaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacatcgtaaacaccttgggt 15464763  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||||||||||||||||    
T  15464762 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttttagggttcat 15464700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 36932119 - 36932279
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||| |||||||||||||   |||||||||||||||| ||| ||   ||||||||||||||  ||||||||||| ||||||||||    
T  36932119 agagagagaaacttggattgcaaaggagggaactttagggttgagtgtctttatagtgatgatctcttgggttggg--aaacattgtaaacaccttgggt 36932216  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||||| ||||||||| |||||||||||||    
T  36932217 agtga-gatttcacca-ttggaaggatcaaaagcttcctcttgtgtcttctgttttagggttcat 36932279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 2785869 - 2785777
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  2785869 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 2785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 5 - 142
Target Start/End: Original strand, 16407724 - 16407863
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||||||| | |||||||||||||||   ||||||||||||||||| ||| |||||||||| |    
T  16407724 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccg 16407823  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgattt 142  Q
    ||| |||||||||  |||||  | ||||||||||||||||    
T  16407824 gtcgtaccttgggacgtacgctccaatcgtgacacgattt 16407863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 16546294 - 16546434
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||||  ||||||| ||| || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||    
T  16546294 aggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataagg 16546393  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||||| | |||||||  | ||||||||||||||||||||    
T  16546394 actggtcgttccttgggacggacgcaaatcgtgacacgatt 16546434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 33768678 - 33768586
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  33768678 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33768586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 33791810 - 33791718
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  33791810 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33791718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 40379756 - 40379896
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||||  ||||||| ||| || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||    
T  40379756 aggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataagg 40379855  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||||| | |||||||  | ||||||||||||||||||||    
T  40379856 actggtcgttccttgggacggacgcaaatcgtgacacgatt 40379896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 40381967 - 40382107
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||||  ||||||| ||| || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||    
T  40381967 aggtgccgtgagctagggttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataagg 40382066  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||||| | |||||||  | ||||||||||||||||||||    
T  40382067 actggtcgttccttgggacggacgcaaatcgtgacacgatt 40382107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 26170440 - 26170576
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||  |||   ||||||||||||||||| ||| ||||||||||||    
T  26170440 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactg 26170539  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacga 139  Q
    ||| |||||||||  | |||||  |||||||||||||    
T  26170540 gtcgtaccttgggacggacgcaccaatcgtgacacga 26170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 24553296 - 24553401
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||    
T  24553296 ttagagaaagaaacttggattacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 24553393  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  24553394 gtagtgag 24553401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 28807169 - 28807261
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||  ||||||||||||||||    
T  28807169 agtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtca 28807261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 38219947 - 38219808
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||| ||| |||||||||||| |||||||||||||||| |||||||||||   ||||||||| ||||||| ||| ||||||||||||    
T  38219947 tgccgtgagctggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactg 38219848  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgattt 142  Q
    ||| ||||||| |  |||||  | ||||||||||||||||    
T  38219847 gtcgtaccttgtgacgtacgttccaatcgtgacacgattt 38219808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 208 - 362
Target Start/End: Original strand, 9353103 - 9353253
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||| ||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  9353103 agagagagaaacttggattacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 9353200  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttt 362  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||||||    
T  9353201 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt 9353253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 9789726 - 9789624
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  9789726 tgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactg 9789627  T
Q  105 gtc 107  Q
    |||    
T  9789626 gtc 9789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 208 - 373
Target Start/End: Complemental strand, 14520556 - 14520396
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||| |||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| |||||||| |    
T  14520556 agagagagaaacttagattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttggat 14520459  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcata 373  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||| |||||||||||||    
T  14520458 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcata 14520396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 18442150 - 18442048
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||  ||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  18442150 tgccgtgagctggtttgcagggtgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 18442051  T
Q  105 gtc 107  Q
    |||    
T  18442050 gtc 18442048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 16544072 - 16544212
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    |||||| |||||||||  || |||| ||| || ||||| |||||| | || |||||||||||||||   |||||||||||||||||||||||||||||||    
T  16544072 aggtgctgtgagctagggttacagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataagg 16544171  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    ||||||| | |||||||  | ||||||||||||||||||||    
T  16544172 actggtcgttccttgggacggacgcaaatcgtgacacgatt 16544212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 28832585 - 28832480
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||||||||||||| |||   || ||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||    
T  28832585 ttagagagagaaacttggattacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgg 28832488  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  28832487 gtagtgag 28832480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 37561054 - 37561130
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggt 106  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||  ||||||||||||||    
T  37561054 caaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggt 37561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 16409163 - 16409299
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    |||||||| ||||||| | |||||||| ||| |||||||||| | |||||||||||||||   ||||||||||||||||| ||| |||||||||||||||    
T  16409163 cgtgagctggtttgcaaggtgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 16409262  T
Q  108 ataccttgggttgtacg--caaatcgtgacacgattt 142  Q
     ||| |||||  |||||  | ||||||||||||||||    
T  16409263 gtacattgggacgtacgctccaatcgtgacacgattt 16409299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 313
Target Start/End: Original strand, 11916746 - 11916846
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   |||||||||| ||||||||| |||  ||||||||||||||  ||||||||||| |||||||||||||    
T  11916746 gagagaaacttggattacaaaggaggtaactttagggttgagtttctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggtagt 11916843  T
Q  311 gag 313  Q
    |||    
T  11916844 gag 11916846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 208 - 312
Target Start/End: Original strand, 11181603 - 11181705
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||| |||||||||||| |||   | |||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  11181603 agagagagaaacttggtttacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 11181700  T
Q  308 agtga 312  Q
    |||||    
T  11181701 agtga 11181705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 31300364 - 31300469
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    ||||||||||||||||||||| ||||||||| |||   | |||||||||||||||||| |||  |||||||||||  || ||||||||||| ||||||||    
T  31300364 ttagagagagaaacttggattgcaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgggtt--gagaaacattgtaaacaccttgg 31300461  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  31300462 gtagtgag 31300469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 31396583 - 31396675
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||||||||||||| ||||| | ||||||| ||  ||||||||||||||||    
T  31396583 agtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataaggactggtca 31396675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 31401440 - 31401532
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || |||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||| ||  ||||||||||||||||    
T  31401440 agtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataaggactggtca 31401532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 37556232 - 37556308
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggt 106  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||||| ||||||||||  ||||||||||||||    
T  37556232 caaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggt 37556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 17003730 - 17003833
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||  |||   |||||||| ||||||||||| |||  ||||||||||| ||  ||||||||||| ||||||||||    
T  17003730 agagagagaaacttggattacaaaggagataactttagggttgaatgtctttgtagtgaggttctcttgggtttgg--aaacattgtaaacaccttgggt 17003827  T
Q  308 agtgag 313  Q
    ||||||    
T  17003828 agtgag 17003833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 35388169 - 35388104
Alignment:
Q  52 aaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggg 117  Q
    |||| |||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttggg 35388104  T

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Target: chr5; HSP #54
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 313
Target Start/End: Original strand, 12083951 - 12084051
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||| ||| |||  |||||||||||||   ||||||| ||| |||||||||||||    
T  12083951 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttgggttgg--taaacattttaaacaccttgggtagt 12084048  T
Q  311 gag 313  Q
    |||    
T  12084049 gag 12084051  T

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Target: chr5; HSP #55
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 29722233 - 29722332
Alignment:
Q  3 ggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcag-aaacttgctcgttaagtatccttgataagga 101  Q
    ||||| |||||||||| |||| | |||||||||||| ||||||  ||||||||||||||||||||  | ||||||||||||||||| ||| |||||||||    
T  29722233 ggtgctgtgagctagtctgcatggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

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Target: chr5; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Original strand, 42127139 - 42127244
Alignment:
Q  206 ttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||||| |||||||||||||||||||||||| |||   | |||||||| ||||||||| |||  |||||||||||  || ||||||||||  ||||||||    
T  42127139 ttagagtgagaaacttggattacaaaggaggtaactttaaggttgagtatctttgtagtgaggttctcttgggtt--gagaaacattgtatacaccttgg 42127236  T
Q  306 gtagtgag 313  Q
    ||||||||    
T  42127237 gtagtgag 42127244  T

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Target: chr5; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 9352890 - 9352972
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    ||||||||||| ||||||||| || ||||||||||||||||  || |||||||||||||||||   ||||||||| |||||||    
T  9352890 tgccgtgagctggtttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagt 9352972  T

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Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 1456861 - 1456914
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||    
T  1456861 aaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgc 1456914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 10282085 - 10281975
Alignment:
Q  204 gcttagagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| |||||||||||||| || ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||| ||||  |||||||| |||    
T  10282085 gctttgagagagaaacttgagaatacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgtgaaa--cattgtaaacac 10281988  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  10281987 cttgggtagtgag 10281975  T

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Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 7160689 - 7160770
Alignment:
Q  222 ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 305  Q
    |||||||||| |||| |||   |||||||||||||||||||| |||  |||||||| |||||  ||||||||||||||||||||    
T  7160689 ggattacaaatgaggtaactttagggttgagtgtctttgtagtgaggttctcttggattggg--aaacattgtaatcaccttgg 7160770  T

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Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 306
Target Start/End: Original strand, 28807436 - 28807479
Alignment:
Q  263 gagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  28807436 gagagtgtttcttaggttgggaaaaacattgtaatcaccttggg 28807479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 19589035 - 19588968
Alignment:
Q  244 agggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagtgag 313  Q
    |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| || |||||| ||||||    
T  19589035 agggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacatcttgggcagtgag 19588968  T

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Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 37561170 - 37561223
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    |||||||| |||||||||||||| | | ||||||||||||||||||| ||||||    
T  37561170 aaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 37561223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 29752307 - 29752267
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgat 45  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  29752307 tgccgtgagctaggttgcagggtgccaaatcgtggcacgat 29752267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 37556348 - 37556401
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||||| || |||||||||||||| | | ||||||||||||||||||| ||||||    
T  37556348 aaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 37556401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 15465042 - 15465002
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgat 45  Q
    ||||||||||| ||||||||| |||||||||||| ||||||    
T  15465042 tgccgtgagctggtttgcagggtgccaaatcgtgacacgat 15465002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 5 - 375
Target Start/End: Original strand, 17514 - 17884
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||||||| ||    
T  17514 tgccgtgagctggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattg 17613  T
Q  105 gtcataccttgggttgtacg--caaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaag-agagcttgtag 201  Q
    ||| ||||||| |  |||||  | ||||||||||||||||  |||| ||||| ||||||| ||  ||||| ||||||||||||  ||| |||||||| |     
T  17614 gtcgtaccttgtgacgtacgttccaatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttgaaggagagcttggaa 17712  T
Q  202 gagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcacc 301  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  17713 gagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcacc 17812  T
Q  302 ttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||| || ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  17813 ttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 17884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 190 - 375
Target Start/End: Original strand, 23794 - 23977
Alignment:
Q  190 gagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaac 289  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||  ||||||||||||||||||||    
T  23794 gagagcttggaagagcttagagagagaaacttggattacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttgggttgggaaaaac 23893  T
Q  290 attgtaatcaccttgggtagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcatatt 375  Q
    ||||||||||||||||||||||| || ||||  | |||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  23894 attgtaatcaccttgggtagtga-gatttcacca-ttggaaggatctaaagcttcctcttgtgtcttctcttttagggttcatatt 23977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 17 - 307
Target Start/End: Original strand, 34648 - 34967
Alignment:
Q  17 gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgg 116  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  34648 gtttgcatgacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgg 34746  T
Q  117 gttgtacgcaaatcgtgacacga---------------------tttcttcagaggaagactagtatatattgtgttattgtgcagatttg--------- 186  Q
    ||     ||| ||||||||||||                     ||||||||||||||||||||||||||||||||| || |||   ||||             
T  34747 gtccgttgcagatcgtgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgcttttttgaagtgaatc 34846  T
Q  187 -taagagagcttgtaggagcttagagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaa 285  Q
     |||||||||||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||| || |    
T  34847 ttaagagagcttgtatgagcttagagagag-aacttggatagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggga 34945  T
Q  286 aaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||    
T  34946 aaacattgtaatcaccttgggt 34967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 2 - 186
Target Start/End: Original strand, 22019 - 22204
Alignment:
Q  2 aggtgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagga 101  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||  |||||||||    
T  22019 aggtgccgtgagctagtttgcaggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataagga 22118  T
Q  102 ctggtcataccttgggttgtacg--caaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttg 186  Q
    | |||| ||||||| |  |||||  | ||||||||||||||||  |||| ||||| ||||||| ||  ||||| |||||||||||||    
T  22119 caggtcgtaccttgtgacgtacgtaccaatcgtgacacgattttatcagtggaaggctagtattta-agtgttcttgtgcagatttg 22204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 8188 - 8348
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  8188 agagagagaaacttggattacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 8285  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||| |||||||||| | |||||||||||||||||||||||    
T  8286 agtga-gatttcacca-ttggaaggattaaaagcttccttttgtgtcttctcttttagggttcat 8348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 8209 - 8098
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  8209 gccgtgagctagtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttg 8110  T
Q  106 tcataccttgggt 118  Q
    ||| |||||||||    
T  8109 tca-accttgggt 8098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 108
Target Start/End: Original strand, 3420 - 3522
Alignment:
Q  6 gccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactgg 105  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |    
T  3420 gccgtgagctagtttgaaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactag 3519  T
Q  106 tca 108  Q
    |||    
T  3520 tca 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 126 - 307
Target Start/End: Original strand, 3560 - 3754
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgt------------aagagagcttgtaggagcttag-aga 212  Q
    ||||||||||||||||||||||| |||||||||||||||||||| || ||||||   ||| |            ||||||| ||||| |||||| | |||    
T  3560 aaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgcttttttttgtagaagaacttaagagagattgtatgagctttgtaga 3659  T
Q  213 gagaaacttggattacaaaggagggaaccaaa-gggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||    
T  3660 gagaa-cttggatagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttaggaaaaacattgtaatcaccttgggt 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 272 - 307
Target Start/End: Original strand, 9514 - 9549
Alignment:
Q  272 tcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||| |||||||||||||||||||||||||||||||    
T  9514 tcttaggttgggaaaaacattgtaatcaccttgggt 9549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 81; Significance: 5e-38; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 5 - 194
Target Start/End: Complemental strand, 9225 - 9036
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| || ||| |||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  9225 tgccgtgagctggtttgcagggtgccaaatcgtgacatgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 9127  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagag 194  Q
    ||| |||||||||  |||||||  ||||||||||||||||  |||| ||||| ||||||| ||  ||||| ||||||||||||  |||||||    
T  9126 gtcgtaccttgggacgtacgcaccaatcgtgacacgattttatcagtggaaggctagtattta-agtgttcttgtgcagattttgaagagag 9036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 11670 - 11534
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||| ||||||||| |||||||||||| |||||| |||||||||||||||||||||   ||||||||||||||||| ||| ||||||||||||    
T  11670 tgccgtgagctggtttgcagggtgccaaatcgtgacacgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactg 11572  T
Q  105 gtcataccttgggttgtacgca--aatcgtgacacgat 140  Q
    ||| |||||||||  |||||||  ||||||||||||||    
T  11571 gtcgtaccttgggacgtacgcaccaatcgtgacacgat 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 2 - 137
Target Start/End: Complemental strand, 4232 - 4096
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||||||  |||||||    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4232 aggtgccgtgagctagggttgcaggggtgcaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataagg 4133  T
Q  101 actggtcataccttgggttgtacgcaaatcgtgacac 137  Q
    ||||||| | |||||||  | ||||||||||||||||    
T  4132 actggtcgttccttgggacggacgcaaatcgtgacac 4096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 3078 - 2967
Alignment:
Q  30 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 129  Q
    ||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||||||  | ||||||||    
T  3078 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacggacgcaaat 2979  T
Q  130 cgtgacacgatt 141  Q
    ||||||||||||    
T  2978 cgtgacacgatt 2967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 867 - 760
Alignment:
Q  2 aggtgccgtgagcta-gtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataagg 100  Q
    ||||||||||||| | |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||    
T  867 aggtgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagg 768  T
Q  101 actggtca 108  Q
    ||||||||    
T  767 actggtca 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 126 - 306
Target Start/End: Complemental strand, 722 - 542
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcagatttgtaagagagcttgtag-gagcttagagagagaaa-cttgg 223  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||| ||||||   |||| |||| | | |  || ||||||| ||||||||| |||||    
T  722 aaatcgtgacacgatttcttcaggggaggactggtatatattgtgttcttgtgcttttttg-aagacaaccttaagagagctta-agagagaaatcttgg 625  T
Q  224 attacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    |   |||||  |||| || | ||| || ||| |||||  ||||| || |||| ||||||||||||||||||||||||||||||    
T  624 agatcaaagaggggatcctatggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggg 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 36603 - 36762
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  |||||||||||||  |||||||||||| ||||||||||    
T  36603 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 36700  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||| ||||||||||||    
T  36701 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 36762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 43732 - 43891
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||| ||||||||||  ||||||||||| ||||||||||    
T  43732 agagagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttgggttggg--aaacattgtaaacaccttgggt 43829  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||| ||||||||||||    
T  43830 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 43891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 36391 - 36446
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacac 63  Q
    |||||||| ||||||||| || |||||||||||||||| ||| |||| ||||||||    
T  36391 cgtgagctggtttgcagggtgtcaaatcgtggcacgattttgtgaaaacgtgacac 36446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 43520 - 43599
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    |||||||| |||| |||| || |||||||||| ||||| ||| |||||||||||| ||||   ||||||||| |||||||    
T  43520 cgtgagctggtttacagggtgtcaaatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagt 43599  T

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Target: scaffold0006 (Bit Score: 70; Significance: 2e-31; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 372
Target Start/End: Original strand, 133050 - 133209
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||||||||||||||||||||||||||   |||||||||| ||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  133050 agagagagaaacttggattacaaaggagggaactttagggttgagtttctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 133147  T
Q  308 agtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttttagggttcat 372  Q
    ||||| || ||||  | ||||||||||  |||||||||| | |||||||||| ||||||||||||    
T  133148 agtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctc-tttagggttcat 133209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 6011 - 5908
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||| ||||||||||||||||| |||   | |||||||||||||||||| |||  |||||||||||||   ||||||||||| ||||||||||    
T  6011 agagagagaaaattggattacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttgggttgg--caaacattgtaaacaccttgggt 5914  T
Q  308 agtgag 313  Q
    ||||||    
T  5913 agtgag 5908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 2819 - 2717
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    ||||||||||| ||||||||||||  ||| |||   |||||| ||| ||||||||| |||  ||||||||||||||  ||||||||||| ||||||| ||    
T  2819 agagagagaaa-ttggattacaaaaaaggtaactttagggttaagtttctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgcgt 2723  T
Q  308 agtgag 313  Q
    ||||||    
T  2722 agtgag 2717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 132838 - 132973
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    |||||||| ||||||||  || ||||||||| |||||| ||| | |||||||||| ||||   ||||||||| ||||||| | |  |||||||  |||||    
T  132838 cgtgagctggtttgcagtgtgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagttttcaggataaggt-tggtc 132936  T
Q  108 ataccttgggttgtacgca--aatcgtgacacgattt 142  Q
     |||||||||| ||||| |  ||||||||||||||||    
T  132937 gtaccttgggtcgtacgtatcaatcgtgacacgattt 132973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 13877 - 13969
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  13877 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 109
Target Start/End: Original strand, 18757 - 18850
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcat 109  Q
    ||||||| ||| || |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||    
T  18757 agtttgctggaagcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcat 18850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 176543 - 176635
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtca 108  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  176543 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 176635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 1832 - 1932
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 115  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||| ||||||    
T  1832 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttg 1930  T
Q  116 gg 117  Q
    ||    
T  1931 gg 1932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 1962 - 2015
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||||||||||||||||||||||| | | ||||||||||||  ||||| ||||||    
T  1962 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 2015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 148537 - 148637
Alignment:
Q  16 agtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 115  Q
    ||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  |||||||||||||||| ||||||    
T  148537 agtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttg 148635  T
Q  116 gg 117  Q
    ||    
T  148636 gg 148637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 148667 - 148720
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgc 179  Q
    ||||||||||||||||||||||| | | ||||||||||||  ||||| ||||||    
T  148667 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 148720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 2 - 141
Target Start/End: Original strand, 5937 - 6078
Alignment:
Q  2 aggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaa-tcgtgacacgattcagaaacttgctcgttaagtatccttgataag 99  Q
    ||||||||||||||||  ||||||| ||| || ||||| ||||||  ||| ||| ||||||||||||   ||||||||||||||||||||||||||||||    
T  5937 aggtgccgtgagctagggttgcagggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataag 6036  T
Q  100 gactggtcataccttgggttgtacgcaaatcgtgacacgatt 141  Q
    |||||||| | |||||||  | ||||||||||||||||||||    
T  6037 gactggtcgttccttgggacggacgcaaatcgtgacacgatt 6078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 565 - 675
Alignment:
Q  5 tgccgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactg 104  Q
    ||||||||||||||||||||| |||||||||||| |||||||||| | |||||||||||||||   ||| ||||||||||||| |||  |||| ||||||    
T  565 tgccgtgagctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgacacgattttcaaatttgctcgttaagtttccaggatagggactg 664  T
Q  105 gtcataccttg 115  Q
    ||| |||||||    
T  665 gtcgtaccttg 675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Original strand, 707 - 806
Alignment:
Q  126 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttattgtgcaga-tttgtaagagagcttgtaggagct--tagagagagaaacttg 222  Q
    |||||||||||||||||  |||| ||||||||||||| ||  ||||| ||||||||| |||| | ||||||||| | |||||   |||||||||||||||    
T  707 aaatcgtgacacgattttatcagtggaagactagtattta-agtgttcttgtgcagattttggaggagagcttggatgagctagaagagagagaaacttg 805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 313
Target Start/End: Complemental strand, 86006 - 85906
Alignment:
Q  211 gagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggtagt 310  Q
    |||||||||||||||||||||||||| |||   |||||||||||||||||||| |||  ||||||||||||||  ||||||||||| ||| |||||||||    
T  86006 gagagaaacttggattacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacactttgggtagt 85909  T
Q  311 gag 313  Q
    |||    
T  85908 gag 85906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 208 - 362
Target Start/End: Complemental strand, 45525 - 45374
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtc-tttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||||||||||||||||||||||||||| |||   |||||||| |||| ||||||| |||  |||||||||||| |  ||||||||||| |||||||||    
T  45525 agagagagaaacttggattacaaaggaggtaactttagggttgaatgtcttttgtagtgaggatctcttgggttgtg--aaacattgtaaacaccttggg 45428  T
Q  307 tagtgaggagttcattagttggaaggatttaaagcttcctctagtgtcttctcttt 362  Q
    |||||| || ||||  | ||||||||||  |||||||||| | |||||||||||||    
T  45427 tagtga-gatttcacca-ttggaaggatcaaaagcttccttttgtgtcttctcttt 45374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 45737 - 45602
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtc 107  Q
    ||||||||  |||||||| || ||||||||||||||||  || |||||||||||||||||   ||||||||| | ||||| | |  |||||||  |||||    
T  45737 cgtgagctgatttgcagggtgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagttttcaggataagg-ttggtc 45639  T
Q  108 ataccttgggttgtacgca--aatcgtgacacgattt 142  Q
     |||||||||| ||||  |  ||||||||||||||||    
T  45638 gtaccttgggtcgtacatatcaatcgtgacacgattt 45602  T

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Target: scaffold0176 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 17577 - 17474
Alignment:
Q  208 agagagagaaacttggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 307  Q
    |||||||||| ||||||||||| |||||| |||   | |||||||||||||||||| |    |||||||| |||||  ||||||||||| ||||||||||    
T  17577 agagagagaaccttggattacataggaggtaactttacggttgagtgtctttgtagtggagatctcttggattggg--aaacattgtaaacaccttgggt 17480  T
Q  308 agtgag 313  Q
    ||||||    
T  17479 agtgag 17474  T

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Target: scaffold0148 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 313
Target Start/End: Complemental strand, 11064 - 10954
Alignment:
Q  204 gcttagagagagaaactt-ggattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcac 300  Q
    |||| ||||||||||||| ||| ||||||||||| |||   | |||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||    
T  11064 gctttgagagagaaactttggaatacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacac 10967  T
Q  301 cttgggtagtgag 313  Q
    |||||||||||||    
T  10966 cttgggtagtgag 10954  T

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Target: scaffold0510 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 1169 - 1248
Alignment:
Q  8 cgtgagctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagt 87  Q
    |||||| | ||||||||| || |||||||||| ||||| ||| |||||||||||||||||   ||||||||| |||||||    
T  1169 cgtgagttggtttgcagggtgtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 1248  T

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Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 23859 - 23755
Alignment:
Q  208 agagagagaaacttg-gattacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 306  Q
    ||||||||||||||| |||||||| ||||| |||   | ||||||| |||||| ||| |||  ||| ||||||||| |||||  ||||||||||||||||    
T  23859 agagagagaaacttgagattacaatggaggtaactttaaggttgagcgtctttatagtgaggttctattgggttggaaaaaa--ttgtaatcaccttggg 23762  T
Q  307 tagtgag 313  Q
    |||||||    
T  23761 tagtgag 23755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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