View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8063_high_9 (Length: 300)
Name: NF8063_high_9
Description: NF8063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8063_high_9 |
 |  |
|
| [»] scaffold0564 (1 HSPs) |
 |  |  |
|
| [»] scaffold0004 (1 HSPs) |
 |  |  |
|
| [»] scaffold0722 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 196; Significance: 1e-107; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 284
Target Start/End: Original strand, 27385345 - 27385628
Alignment:
| Q |
1 |
tagaaatgagaaattttaaaatgaaacgaggagaacaatgtctatgtcatgtttaagttttggaaatggagtcaatcattaacttcgtccttgaatttgc |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| |
|
|
| T |
27385345 |
tagaaatgagaaattttaaaatgaaatgaggagaacaatgtctatgtcatgtttaagttttggaaatggactgaatcatcaacttcgtccttgaatttgc |
27385444 |
T |
 |
| Q |
101 |
aaggatcaatcaaattcattttttaatttgttgaaatatcaaattaatctttgaatttaatagatatctatcaaatttatccctccgtctaatctctccg |
200 |
Q |
| |
|
|| | ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||| |||| |||||| |||||||||| |
|
|
| T |
27385445 |
aaacactaatcaaattcattccttaatttgttgaaatatcaaattaatctctgaatttaataggcattcatcaaattcatccatccgtccaatctctccg |
27385544 |
T |
 |
| Q |
201 |
tcagtgagactgatgtgtcgtccatgagctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||| |
|
|
| T |
27385545 |
tcagtgaggctgatgtgtcgtccatgagctcagttcctatacaatcaactttgtccatcaaccttgtcttccaaacctcttcat |
27385628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 10542579 - 10542688
Alignment:
| Q |
92 |
tgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatatcaaattaatctttgaatttaatagatatctatcaaatttatccctccgtcta |
191 |
Q |
| |
|
|||||||| |||||||||||||||| | ||||||||||| |||||| ||||||| || || ||| ||| | || |||||||||||||||||||| | |
|
|
| T |
10542579 |
tgaatttgtaaggatcaatcaaatttgtcttttaatttgtcgaaatagcaaattagtccttaaatctaacgaacgtccatcaaatttatccctccgtcca |
10542678 |
T |
 |
| Q |
192 |
atctctccgt |
201 |
Q |
| |
|
|||||||||| |
|
|
| T |
10542679 |
atctctccgt |
10542688 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 11254963 - 11254908
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
11254963 |
agctcacttcctacacaattaactttatccaacaaccttgccctccaaacctcttc |
11254908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 35402701 - 35402646
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
35402701 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
35402646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 41760760 - 41760705
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
41760760 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
41760705 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 49524223 - 49524278
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
49524223 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
49524278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 32652949 - 32653006
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| |||||||||||| |||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
32652949 |
agctcacttcctatacaatcaactttttccatcaaccttgccctccaaacctcgtcat |
32653006 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 2692312 - 2692264
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2692312 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
2692264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 51013025 - 51013073
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
51013025 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
51013073 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 158
Target Start/End: Complemental strand, 10545050 - 10544973
Alignment:
| Q |
81 |
aacttcgtccttgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatatcaaattaatctttgaattt |
158 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||| || | |||||||||| |||||| | ||||| ||||||||||| |
|
|
| T |
10545050 |
aacttcgtccctgaatttccaaggatcaatcaattttgtcctttaatttgtcgaaatagctaattagtctttgaattt |
10544973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 11641187 - 11641235
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
11641187 |
ttcctacacaatcaactttatccatcaaccttgccctccaatcctcttc |
11641235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 41760632 - 41760577
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| |||| |||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
41760632 |
agctcacttcctacccaatcaactttatgcatcaaccttgccctccaaacctcttc |
41760577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 5e-16; HSPs: 16)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 47385240 - 47385185
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
47385240 |
agctcacttcctacacaatcaactttatccatcaaccttgccttccaaacctcttc |
47385185 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 69215 - 69270
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
69215 |
agctcacttcctacacaatgaactttatccatcaaccttgccctccaaacctcttc |
69270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 6604616 - 6604671
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
6604616 |
agctcacttcctatacaatcaactttatccatcaaccttgcccttcaaacctcttc |
6604671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 11683688 - 11683745
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| |||||||||| | |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
11683688 |
agctcacttcctatacactcaactttgtccatcaaccttgccctccaaacctcttcat |
11683745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Original strand, 45360429 - 45360482
Alignment:
| Q |
229 |
ctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||| |||||||||||| |||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
45360429 |
ctcacttcctatacaatcaactttttccatcaaccttgccctccaaacctcttc |
45360482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 24227454 - 24227399
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
24227454 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacttcttc |
24227399 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 34775995 - 34775940
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
34775995 |
agctcacttcctacacaatcaactttattcatcaaccttgccctccaaacctcttc |
34775940 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 35692384 - 35692329
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
35692384 |
agctcacttcctacacaatcaactttatccaccaaccttgccctccaaacctcttc |
35692329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 366760 - 366842
Alignment:
| Q |
131 |
ttgaaatatcaaattaatctttgaatttaatagatatctatcaaatttatccctccgtctaatctctccgtcagtgagactga |
213 |
Q |
| |
|
|||||||||||||||| || ||||||||| ||| ||||||||||| ||||||||||| |||| | |||| |||||| |||| |
|
|
| T |
366760 |
ttgaaatatcaaattagtccctgaatttaacagacgtctatcaaattcatccctccgtccaatcccaccgttagtgaggctga |
366842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 4321845 - 4321795
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||||||||| |||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
4321845 |
ttcctatacaatcaactttgtccatcaaccttgccctccaaacctcgtcat |
4321795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 227 - 280
Target Start/End: Complemental strand, 23905285 - 23905232
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctct |
280 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||| | ||||||||||| |
|
|
| T |
23905285 |
agctcacttcctacacaatcaactttatccatcaaccttgtcctccaaacctct |
23905232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 38473150 - 38473102
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
38473150 |
ttcctacacaatcaactttatccatcaactttgccctccaaacctcttc |
38473102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 22154991 - 22155046
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| || || |||||||||||||||||||| | ||||||||||||| |
|
|
| T |
22154991 |
agctcacttcctacacgatcaactttatccatcaaccttgtcctccaaacctcttc |
22155046 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 22210906 - 22210961
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| || || |||||||||||||||||||| | ||||||||||||| |
|
|
| T |
22210906 |
agctcacttcctacacgatcaactttatccatcaaccttgtcctccaaacctcttc |
22210961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 32840561 - 32840605
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacct |
278 |
Q |
| |
|
|||||| ||||| |||||| ||||||||||||||| ||||||||| |
|
|
| T |
32840561 |
ttcctacacaatcaactttgtccatcaaccttgccctccaaacct |
32840605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 48311046 - 48311094
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
48311046 |
ttcctacacaatcgactttatccatcaacattgccctccaaacctcttc |
48311094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 44708848 - 44708800
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
44708848 |
ttcctacacaattaactttatccatcaaccttgccctccaaacctcttc |
44708800 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 14388127 - 14388072
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
14388127 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
14388072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 17697317 - 17697372
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17697317 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
17697372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 39456269 - 39456324
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
39456269 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
39456324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 2768031 - 2768079
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2768031 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
2768079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 6784314 - 6784266
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6784314 |
ttcctaaacaatcaactttatccatcaaccttgccctccaaacctcttc |
6784266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 6798616 - 6798671
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
6798616 |
agctcacttcctacacaatcaactttattcatcaaccttgccctccaaacctcttc |
6798671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 24206564 - 24206509
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| | ||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24206564 |
agctcacttcctacataatcaactttatccatcaaccttgccctccaaacctcttc |
24206509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 34401216 - 34401161
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| |||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
34401216 |
agctcacttcctactcaatcaactttatccatcaaccttgccctccaaacctcttc |
34401161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 16764063 - 16764111
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| || |||||||||| |
|
|
| T |
16764063 |
ttcctacacaatcaactttatccatcaaccttgccctctaaacctcttc |
16764111 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 38149365 - 38149411
Alignment:
| Q |
238 |
tatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||||| |||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
38149365 |
tatacaatcaactttgtccatcaaccttgccctccaaacctcgtcat |
38149411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 20941802 - 20941858
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| |||||| ||||| |||||| ||||||||||||| | ||||||||||||||| |
|
|
| T |
20941802 |
agctcacttcctacacaatcaactttgtccatcaaccttg-catccaaacctcttcat |
20941858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 223
Target Start/End: Complemental strand, 26584876 - 26584787
Alignment:
| Q |
134 |
aaatatcaaattaatctttgaatttaatagatatctatcaaatttatccctccgtctaatctctccgtcagtgagactgatgtgtcgtcc |
223 |
Q |
| |
|
|||||||||||||||| | ||||||||||| || |||||||| ||||||||||| | || ||| | |||||| |||| ||||||||| |
|
|
| T |
26584876 |
aaatatcaaattaatccctcaatttaatagacgtccatcaaattcatccctccgtccattccctctggtagtgaggctgacgtgtcgtcc |
26584787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 158
Target Start/End: Complemental strand, 42003581 - 42003492
Alignment:
| Q |
69 |
gagtcaatcattaacttcgtccttgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatatcaaattaatctttgaattt |
158 |
Q |
| |
|
|||| ||||||||||||||| ||||||||| |||||||| |||||||| || | |||| |||||||||| ||||||| ||||||| |
|
|
| T |
42003581 |
gagtgaatcattaacttcgttcttgaatttttaaggatcagtcaaattcgttcatcaattatgcgaaatatcaatttaatctctgaattt |
42003492 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 282
Target Start/End: Complemental strand, 42518447 - 42518406
Alignment:
| Q |
241 |
acaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
42518447 |
acaatcaactttatccatcaaccttgccctccaaacttcttc |
42518406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 3152564 - 3152509
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
3152564 |
agctcacttcctatacaatcaactttatccatcaaccttgccctccaagcctcttc |
3152509 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 5037527 - 5037582
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
5037527 |
agctcacttcctacacaatcaactttatcgatcaaccttgccttccaaacctcttc |
5037582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 15307383 - 15307438
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15307383 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
15307438 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 15487752 - 15487807
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
15487752 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
15487807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 27405169 - 27405121
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27405169 |
ttcctagacaatcaactttatccatcaaccttgccctccaaacctcttc |
27405121 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 40338699 - 40338651
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
40338699 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
40338651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 41041618 - 41041563
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
41041618 |
agctcacttcctacacaatcaactttatccatcaaccttgcccttcaaacctcttc |
41041563 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 10770975 - 10770938
Alignment:
| Q |
247 |
aactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10770975 |
aactttgtccatcaaccttgccttccaaacctcttcat |
10770938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 13485163 - 13485119
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacct |
278 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
13485163 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacct |
13485119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 28432991 - 28432934
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| ||| |||||||| |||||| |||||||||||||| |||||||||| |||| |
|
|
| T |
28432991 |
agctcacttcttatacaatcaactttgcccatcaaccttgccctccaaacctcgtcat |
28432934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 27692257 - 27692305
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaa |
275 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||| | |||||| |
|
|
| T |
27692257 |
agctcacttcctacacaatcaactttatccatcaaccttgtcctccaaa |
27692305 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 29238292 - 29238340
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||||| | ||||||||||| |
|
|
| T |
29238292 |
ttcctacacaatcaactttatccaccaaccttgcccttcaaacctcttc |
29238340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 33707843 - 33707795
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaa |
275 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||| | |||||| |
|
|
| T |
33707843 |
agctcacttcctacacaatcaactttatccatcaaccttgtcctccaaa |
33707795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 7372016 - 7371961
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7372016 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
7371961 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 9399209 - 9399264
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9399209 |
agctcatttcctacacaatcaactttatccatcaactttgccttccaaacctcttc |
9399264 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 32517962 - 32518017
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
32517962 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
32518017 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 277
Target Start/End: Complemental strand, 32438113 - 32438063
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacc |
277 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
32438113 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacc |
32438063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 282
Target Start/End: Original strand, 18644387 - 18644427
Alignment:
| Q |
242 |
caattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
18644387 |
caatcaactttatccatcaaccttgccctccaaacctcttc |
18644427 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 20524478 - 20524526
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaa |
275 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| |||||| |
|
|
| T |
20524478 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaa |
20524526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 17936619 - 17936561
Alignment:
| Q |
81 |
aacttcgtccttgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatat |
139 |
Q |
| |
|
|||||||||||||||||||||||||| ||||| ||| | ||| ||||||| ||||||| |
|
|
| T |
17936619 |
aacttcgtccttgaatttgcaaggataaatcagtttcgtctttcaatttgtcgaaatat |
17936561 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 107
Target Start/End: Original strand, 21134982 - 21135015
Alignment:
| Q |
74 |
aatcattaacttcgtccttgaatttgcaaggatc |
107 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
21134982 |
aatcattaacttcgtccttgaatttgtaaggatc |
21135015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 42472516 - 42472461
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
42472516 |
agctcacttcctagacaatcaactttatccatcaaccttgccctccaaacctcttc |
42472461 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 1344296 - 1344353
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| |||||||||||| |||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
1344296 |
agctcacttcctatacaatcaactttgtccatcaaccttgccctccaaacctcatcat |
1344353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 17575034 - 17575082
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17575034 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
17575082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 17575754 - 17575802
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17575754 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
17575802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 17577065 - 17577113
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17577065 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
17577113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 21842092 - 21842147
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||| | ||||||||||||| |
|
|
| T |
21842092 |
agctcacttcctacacaatcaactttatccatcaaccttgtcctccaaacctcttc |
21842147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 9221786 - 9221684
Alignment:
| Q |
84 |
ttcgtccttgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatatcaaattaatctttgaatttaatagatatctatcaaatttatccc |
183 |
Q |
| |
|
|||||| || ||||||||||||||| |||||||| | | ||||| |||||||||||||||| | ||||||||| ||| ||| |||||||| ||||| |
|
|
| T |
9221786 |
ttcgtctttaaatttgcaaggatcagtcaaattcgtctcccaattttttgaaatatcaaattagcttctgaatttaacagacatccatcaaattcatccc |
9221687 |
T |
 |
| Q |
184 |
tcc |
186 |
Q |
| |
|
||| |
|
|
| T |
9221686 |
tcc |
9221684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 28821485 - 28821539
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctctt |
281 |
Q |
| |
|
|||||| |||||| ||||| ||||||||||||||||||| || |||||||||||| |
|
|
| T |
28821485 |
agctcacttcctacacaatcaactttatccatcaacctttccctccaaacctctt |
28821539 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 2180862 - 2180917
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||||||| |||||||||| | ||||||||||||| |
|
|
| T |
2180862 |
agctcacttcctacacaatcaactttatcgatcaaccttgtcctccaaacctcttc |
2180917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 18624348 - 18624293
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||| |||||||||||||| | ||||||||||||| |
|
|
| T |
18624348 |
agctcacttcctacacaatcaacttcatccatcaaccttgtcatccaaacctcttc |
18624293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 107
Target Start/End: Complemental strand, 24498158 - 24498120
Alignment:
| Q |
69 |
gagtcaatcattaacttcgtccttgaatttgcaaggatc |
107 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||||||||| |
|
|
| T |
24498158 |
gagtgaatcattaacttcgtccgtgaatttgcaaggatc |
24498120 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 28036432 - 28036375
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| |||||| ||||| || ||| ||||||||||||||| ||||||| ||||||| |
|
|
| T |
28036432 |
agctcacttcctacacaatcaattttgtccatcaaccttgccctccaaacttcttcat |
28036375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 18)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 17516420 - 17516475
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
17516420 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
17516475 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 27898148 - 27898093
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27898148 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
27898093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 30599241 - 30599186
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
30599241 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
30599186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 23877040 - 23876948
Alignment:
| Q |
131 |
ttgaaatatcaaattaatctttgaatttaatagatatctatcaaatttatccctccgtctaatctctccgtcagtgagactgatgtgtcgtcc |
223 |
Q |
| |
|
|||||||||||||||| ||| ||||||||| | | || |||||||| ||||||||||| |||| |||||| |||||| || | ||||||||| |
|
|
| T |
23877040 |
ttgaaatatcaaattagtctctgaatttaacaaacgtccatcaaattcatccctccgtccaatccctccgttagtgaggctaacgtgtcgtcc |
23876948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Original strand, 46198837 - 46198885
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
46198837 |
ttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
46198885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 43766232 - 43766287
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| | |||||||||||||||||||| ||||||||||||| |
|
|
| T |
43766232 |
agctcacttcctacacaatcagctttatccatcaaccttgccctccaaacctcttc |
43766287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 53188733 - 53188678
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
53188733 |
agctcacttcctacacaatcaactttatccatcaactttgccctccaaacctcttc |
53188678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 54899552 - 54899607
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
54899552 |
agctcacttcctacacaatcaactttacccatcaaccttgccctccaaacctcttc |
54899607 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 139
Target Start/End: Original strand, 32842442 - 32842500
Alignment:
| Q |
81 |
aacttcgtccttgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatat |
139 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| | ||| ||||||| ||||||| |
|
|
| T |
32842442 |
aacttcgtccttgaatttgcaaggatcaatcagtttcgtctttcaatttgtcgaaatat |
32842500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 35904780 - 35904731
Alignment:
| Q |
229 |
ctcagttcctatacaattaactttatccatcaaccttgccttccaaacct |
278 |
Q |
| |
|
|||| |||||| ||||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
35904780 |
ctcacttcctacacaatcaactttatccatcaaccttgccctccaaacct |
35904731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 610705 - 610752
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaa |
274 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||| |
|
|
| T |
610705 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaa |
610752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 2378100 - 2378155
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
2378100 |
agctcatttcctacgcaatcaactttatccatcaaccttgctctccaaacctcttc |
2378155 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 23876255 - 23876218
Alignment:
| Q |
247 |
aactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
23876255 |
aactttgtccatcaaccttgccctccaaacctcttcat |
23876218 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 41945427 - 41945484
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| |||||||||||| |||||| ||||||||||||| | || ||||||| |||| |
|
|
| T |
41945427 |
agctcacttcctatacaatcaactttgtccatcaaccttgtcctctaaacctcgtcat |
41945484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 2661325 - 2661373
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaa |
275 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||| | |||||| |
|
|
| T |
2661325 |
agctcacttcctacacaatcaactttatccatcaaccttgtcctccaaa |
2661373 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 32844455 - 32844419
Alignment:
| Q |
81 |
aacttcgtccttgaatttgcaaggatcaatcaaattc |
117 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
32844455 |
aacttcgtccttgagtttgcaaggattaatcaaattc |
32844419 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 44795310 - 44795358
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaa |
275 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||| | |||||| |
|
|
| T |
44795310 |
agctcacttcctacacaatcaactttatccatcaaccttgtcctccaaa |
44795358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 49494481 - 49494521
Alignment:
| Q |
74 |
aatcattaacttcgtccttgaatttgcaaggatcaatcaaa |
114 |
Q |
| |
|
|||||| |||||||||| |||||||||||| |||||||||| |
|
|
| T |
49494481 |
aatcatcaacttcgtccctgaatttgcaagcatcaatcaaa |
49494521 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 25277400 - 25277345
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
25277400 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
25277345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 37087320 - 37087375
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37087320 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
37087375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 37345427 - 37345482
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
37345427 |
agctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
37345482 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 223
Target Start/End: Complemental strand, 42560024 - 42559882
Alignment:
| Q |
81 |
aacttcgtccttgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatatcaaattaatctttgaatttaatagatatctatcaaatttat |
180 |
Q |
| |
|
|||||||| |||||||||||||||| ||||||||| || | ||||| | ||||||| ||||| ||| | || |||| ||| || |||||||| || |
|
|
| T |
42560024 |
aacttcgttcttgaatttgcaaggaccaatcaaatatatcctccaatttatcgaaatattaaatttgtctctaaaattaacagacgtccatcaaattcat |
42559925 |
T |
 |
| Q |
181 |
ccctccgtctaatctctccgtcagtgagactgatgtgtcgtcc |
223 |
Q |
| |
|
||||||||| |||||||| || |||||| |||||| ||||||| |
|
|
| T |
42559924 |
ccctccgtccaatctctctgttagtgaggctgatgcgtcgtcc |
42559882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 282
Target Start/End: Complemental strand, 50555134 - 50555081
Alignment:
| Q |
229 |
ctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||| |||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
50555134 |
ctcacttcctacacaatcaactttatccatcaaccttgccctccaaacctcttc |
50555081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 33600170 - 33600122
Alignment:
| Q |
234 |
ttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
33600170 |
ttcctagacaatcaactttatccatcaaccttgccctccaaacctcttc |
33600122 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 6817749 - 6817694
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| ||| || ||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6817749 |
agctcacttcttacacaatcaactttatccatcaaccttgccctccaaacctcttc |
6817694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 26224578 - 26224523
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
26224578 |
agctcacttcctacacaatcaactttatccatcaaccttgcccttcaaacctcttc |
26224523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 27088377 - 27088432
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||| | ||||||||||||| |
|
|
| T |
27088377 |
agctcacttcctacacaatcaactttatccatcaaccttgtcctccaaacctcttc |
27088432 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 45045536 - 45045481
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
45045536 |
agctcacttcctacacaatcaactttatccatcaagcttgccctccaaacctcttc |
45045481 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 15105537 - 15105592
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||| |||||||||||||| | ||||||||||||| |
|
|
| T |
15105537 |
agctcatttcctacacaatcaacttcatccatcaaccttgtcatccaaacctcttc |
15105592 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 42557957 - 42558004
Alignment:
| Q |
69 |
gagtcaatcattaacttcgtccttgaatttgcaaggatcaatcaaatt |
116 |
Q |
| |
|
|||| |||||| |||||||||||| |||||||||||| |||||||||| |
|
|
| T |
42557957 |
gagtgaatcatcaacttcgtccttaaatttgcaaggaccaatcaaatt |
42558004 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 284
Target Start/End: Complemental strand, 42558903 - 42558846
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttcat |
284 |
Q |
| |
|
|||||| |||||| ||| | |||||| |||||||||| |||| ||||||||||||||| |
|
|
| T |
42558903 |
agctcacttcctacacagtcaactttgtccatcaaccatgccctccaaacctcttcat |
42558846 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0564 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0564
Description:
Target: scaffold0564; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Original strand, 9360 - 9415
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| ||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
9360 |
agctcacttcctacacaatcaactttatcgatcaaccttgccctccaaacctcttc |
9415 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0004
Description:
Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 282
Target Start/End: Complemental strand, 107619 - 107564
Alignment:
| Q |
227 |
agctcagttcctatacaattaactttatccatcaaccttgccttccaaacctcttc |
282 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||||||||| || |||||||||| |
|
|
| T |
107619 |
agctcacttcctacacaatcaactttatccatcaaccttgccctcaaaacctcttc |
107564 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0722 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0722
Description:
Target: scaffold0722; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 4959 - 4903
Alignment:
| Q |
84 |
ttcgtccttgaatttgcaaggatcaatcaaattcattttttaatttgttgaaatatc |
140 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||| || ||||||| |||||||| |
|
|
| T |
4959 |
ttcgtccttgaatttgtaaggatcaaccaaattcatccttcaatttgtcgaaatatc |
4903 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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