View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8063_low_6 (Length: 478)
Name: NF8063_low_6
Description: NF8063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8063_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 444; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 444; E-Value: 0
Query Start/End: Original strand, 8 - 463
Target Start/End: Complemental strand, 36491405 - 36490950
Alignment:
| Q |
8 |
agattatactcctgaataaagaggttgttattcatgtcagacctttacttgcaactattctgattgccagcgtgattgggatgcatttaaatggtaattg |
107 |
Q |
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| T |
36491405 |
agattatactcctgaatgaagaggttgttattcatgtcagacctttacttgcaactattctgattgccagcgtgattgggatgcatttaaatggtaattg |
36491306 |
T |
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| Q |
108 |
aagttatgactttggttatagttattaaatttctttgtttgtattaggtaatcttattcataaaactttattacatactattgttttaggttcataaaaa |
207 |
Q |
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| T |
36491305 |
aagttatgactttggttatagttattaaatttctttgtttgtattaggtaatcttattcataaaactttattacatactattgttttaggttcataaaaa |
36491206 |
T |
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| Q |
208 |
gaaaaggaattgtttgcatcagaaaaagatgattggtttagtttatgcaatgtacaacttgaagctaaaaagtcaagaaaaaagatggaatgaagcggtt |
307 |
Q |
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| T |
36491205 |
gaaaaggaattgtttgcatcagaaaaagatgattggtttagtttatgcaatgtacaacttgaagctaaaaagtcaagaaaaaagatggaatgaagtggtt |
36491106 |
T |
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| Q |
308 |
acatttgatgaaattgattctgatgataaatgggttactgaagagggatgttggtgaagacgtgaagctaatgtggagcaagaacaacctaccaaagtgg |
407 |
Q |
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| T |
36491105 |
acatttgatgaaattgattctgatgataaatgggttactgaagagggatgttggtgaagacgtgaggctaatgtggagcaagaacaacctaccaaagtgg |
36491006 |
T |
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| Q |
408 |
agcaaccttttcataatgttgataattcgatctttgactctaatgttgaagaacct |
463 |
Q |
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| T |
36491005 |
agcaaccttttcataatgttgataattcgatctttgactctaatgttgaagaacct |
36490950 |
T |
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