View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8064_low_2 (Length: 451)

Name: NF8064_low_2
Description: NF8064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8064_low_2
NF8064_low_2
[»] chr2 (15 HSPs)
chr2 (15-451)||(30383774-30384210)
chr2 (107-408)||(30393997-30394296)
chr2 (172-362)||(30475225-30475415)
chr2 (172-408)||(8380009-8380245)
chr2 (181-362)||(30436363-30436544)
chr2 (181-344)||(30424112-30424275)
chr2 (181-362)||(30468105-30468286)
chr2 (181-362)||(30482837-30483018)
chr2 (189-344)||(30430153-30430308)
chr2 (156-408)||(23784191-23784443)
chr2 (156-408)||(23767636-23767888)
chr2 (156-408)||(23796805-23797057)
chr2 (15-67)||(30393925-30393977)
chr2 (15-67)||(30482170-30482222)
chr2 (299-363)||(30403371-30403435)
[»] chr5 (2 HSPs)
chr5 (171-363)||(41628321-41628513)
chr5 (15-65)||(41628725-41628775)
[»] chr8 (3 HSPs)
chr8 (182-341)||(15846083-15846242)
chr8 (182-341)||(15860272-15860431)
chr8 (218-340)||(15852912-15853034)
[»] chr4 (1 HSPs)
chr4 (299-344)||(11018087-11018132)


Alignment Details
Target: chr2 (Bit Score: 405; Significance: 0; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 405; E-Value: 0
Query Start/End: Original strand, 15 - 451
Target Start/End: Original strand, 30383774 - 30384210
Alignment:
Q  15 agcatagaaagctaatcaaccctgctttccatttagaaaagttgaaggttagtgatatatcaagttatagattataagttaatttatatgaatttgactg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  30383774 agcatagaaagctaatcaaccctgctttccatttagaaaagttgaaggttagtgatatatcaagttatagattataagttagtttatatgaatttgactg 30383873  T
Q  115 gaaatttgaagtcttgagtcatttctttatgaatatacaacagattatgaccccggctttcttcataagttgcaatgatttgattaacaaatgggagaaa 214  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30383874 gaaatttgaagtcttaagtcatttccttatgaatatacaacagattatgaccccggctttcttcacaagttgcaatgatttgattaacaaatgggagaaa 30383973  T
Q  215 atgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgatgctatttctcgaaccgcatttggaagtagttatg 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30383974 atgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgatgctatttctcgaaccgcatttggaagtagctatg 30384073  T
Q  315 aagaaggaaaaagaatatttcaacttcaaagagagcaagctgaacttatagtgaaagttgtcatgaaatctatcatccctttatggatgtaagagaactc 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  30384074 aagaaggaaaaagaatatttcaacttcaaagagagcaagctgaacttatagtgaaagttgtaacgaaatctatcatccctttatggatgtaagagaactc 30384173  T
Q  415 tggacttcctttcttttatttctaagtataacaattc 451  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30384174 tggacttcctttcttttattactaagtataacaattc 30384210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 107 - 408
Target Start/End: Original strand, 30393997 - 30394296
Alignment:
Q  107 tttgactggaaatttgaagtcttgagtcatttctttatgaatatacaacagattatgaccccggctttcttcataagttgcaatgatttgattaacaaat 206  Q
    |||||||||||||||||| | || ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  30393997 tttgactggaaatttgaattttt-agtcatttctttatgaa-atacgacagattatgaccccggctttcttcacaagttgcaatgatatgattagcaaat 30394094  T
Q  207 gggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgatgctatttctcgaaccgcatttggaag 306  Q
    ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  30394095 gggaggaaatgttgtcttcagatggatcatgtgaaatagacgtatggccttccctgcagaatttggcaagtgatgctatttctcgaactgcgtttggaag 30394194  T
Q  307 tagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaacttatagtgaaagttgtcatgaaatctatcatccctttatggatgtaa 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   | |||||| ||||||||||  ||||||||||||||||||    
T  30394195 tagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaacttataacaacagttgttatgaaatctacaatccctttatggatgtaa 30394294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 172 - 362
Target Start/End: Original strand, 30475225 - 30475415
Alignment:
Q  172 tttcttcataagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttg 271  Q
    |||||||| ||||||  |||||||||||| ||||||||||| ||||||||| |||||||||||||||||| | ||| | ||||||| ||| |||||||||    
T  30475225 tttcttcaaaagttgtgatgatttgattaccaaatgggagagaatgttgtcatcagatggatcatgtgaattggatgtttggcctttccttcaaaatttg 30475324  T
Q  272 gcaagtgatgctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaactta 362  Q
    || ||||||| ||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||    
T  30475325 gcgagtgatgttatttctagaacagcatttggaagtagttatgaagagggaaaaagaatatttcaacttcaaatcgagcaagctgaactta 30475415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 172 - 408
Target Start/End: Complemental strand, 8380245 - 8380009
Alignment:
Q  172 tttcttcataagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttg 271  Q
    |||| ||| |||||||| |||| |||||| ||||||||||  || |||||| |||||||||||| |||||||||| |||||||||||||| || ||||||    
T  8380245 tttcctcacaagttgcattgatatgattagcaaatgggagtcaacgttgtcatcagatggatcaggtgaaatagacatatggccttccctacagaatttg 8380146  T
Q  272 gcaagtgatgctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaacttatagtgaaag 371  Q
     ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||| |  |||||     
T  8380145 acaagtgatgttatttctcgaaacgcatttggaagtagttacgaagaaggaaaaagaatatttgatcttcaaagagagcaaggtgaacttgttatgaaaa 8380046  T
Q  372 ttgtcatgaaatctatcatccctttatggatgtaaga 408  Q
     | |  |||||||| | ||||||||||||| ||||||    
T  8380045 atctagtgaaatctttaatccctttatggaggtaaga 8380009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 181 - 362
Target Start/End: Original strand, 30436363 - 30436544
Alignment:
Q  181 aagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgat 280  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||| ||| ||||||||||| ||||||    
T  30436363 aagttgcgatgatttgattagcaaatgggagaaaatgttgtcgtcagatggatcatgtgaaatggacgtatggcctttccttcaaaatttggccagtgat 30436462  T
Q  281 gctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaactta 362  Q
      |||||||||| | || |||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  30436463 cttatttctcgagcagcgtttggaagtagttatgaagagggaaaaagaatatttcaacttcaaaccgaacaagctgaactta 30436544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 181 - 344
Target Start/End: Original strand, 30424112 - 30424275
Alignment:
Q  181 aagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgat 280  Q
    ||||||| ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||| ||| ||||||||||| ||||||    
T  30424112 aagttgcgatgatctgattagcaaatgggagaaaatgttggcttcagatggatcatgtgaaatggacgtatggcctttccttcaaaatttggcgagtgat 30424211  T
Q  281 gctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaa 344  Q
    | |||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30424212 gttatttctcgagctgcatttggaagtagttatgaagagggaaaaagaatatttcaacttcaaa 30424275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 181 - 362
Target Start/End: Original strand, 30468105 - 30468286
Alignment:
Q  181 aagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgat 280  Q
    ||||||| ||||| |||||| ||||||||||||||||||||| |||||||||||||||||||| ||  ||||||||| ||| |||||||| || ||||||    
T  30468105 aagttgcgatgatctgattagcaaatgggagaaaatgttgtcgtcagatggatcatgtgaaatggacgtatggcctttccttcaaaattttgccagtgat 30468204  T
Q  281 gctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaactta 362  Q
    | |||||||||| | || |||||||||||||||||||| |||||||||||||||||||||||||  || |||||||||||||    
T  30468205 gttatttctcgagcagcgtttggaagtagttatgaagagggaaaaagaatatttcaacttcaaaccgaacaagctgaactta 30468286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 181 - 362
Target Start/End: Original strand, 30482837 - 30483018
Alignment:
Q  181 aagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgat 280  Q
    ||||||||||||| |||||| ||||||||||  |||||| || | |||||||||||||||||| ||| ||||||||||| | ||||||||||| ||||||    
T  30482837 aagttgcaatgatatgattagcaaatgggagggaatgttatcattagatggatcatgtgaaattgatgtatggccttccattcaaaatttggctagtgat 30482936  T
Q  281 gctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaactta 362  Q
    | |||| ||||||| |||||||||||||||||||||||||||| || |||||||||||||||||  ||||||||||||||||    
T  30482937 gttattgctcgaacagcatttggaagtagttatgaagaaggaataaaaatatttcaacttcaaaaggagcaagctgaactta 30483018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 189 - 344
Target Start/End: Original strand, 30430153 - 30430308
Alignment:
Q  189 atgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgatgctatttc 288  Q
    ||||| |||||| ||||||||||||||||||| |||||||||||||||||||||| ||  ||||||||| ||| |||||||| ||||| |||| ||||||    
T  30430153 atgatctgattagcaaatgggagaaaatgttggcttcagatggatcatgtgaaatggaagtatggcctttccttcaaaatttagcaagagatgttatttc 30430252  T
Q  289 tcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaa 344  Q
    |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30430253 tcgagctgcatttggaagtagttatgaagagggaaaaagaatatttcaacttcaaa 30430308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 156 - 408
Target Start/End: Complemental strand, 23784443 - 23784191
Alignment:
Q  156 agattatgaccccggctttcttcataagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggcc 255  Q
    |||||||||| ||  | ||||| | ||| |||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||||||| ||  |||||||    
T  23784443 agattatgacaccaacattcttgaaaagctgcaatgatttgattagcaattgggaaaaaatgttgtcttcaaatggatcatgtgaaatggacgtatggcc 23784344  T
Q  256 ttccctgcaaaatttggcaagtgatgctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagct 355  Q
    |||||| || |  ||| ||||||||| |||  ||||  |  ||||||||||||||||||||||||||| || | ||||||||||||||| |||||||| |    
T  23784343 ttcccttcagagcttgacaagtgatgttatcgctcgttcgtcatttggaagtagttatgaagaaggaagaaaagtatttcaacttcaaatagagcaaggt 23784244  T
Q  356 gaacttatagtgaaagttgtcatgaaatctatcatccctttatggatgtaaga 408  Q
    ||||||||| |||||  | | ||||||||| | ||||||||||||| ||||||    
T  23784243 gaacttataatgaaaaatctaatgaaatctttaatccctttatggaggtaaga 23784191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 156 - 408
Target Start/End: Original strand, 23767636 - 23767888
Alignment:
Q  156 agattatgaccccggctttcttcataagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggcc 255  Q
    |||||||||| ||  | ||||| | ||| ||||| |||||||||| ||| |||||  ||| |||||||||| ||||||| | ||||||||| ||||||||    
T  23767636 agattatgacaccaacattcttgaaaagctgcaacgatttgattagcaattgggaagaaacgttgtcttcaaatggatcctctgaaatagacatatggcc 23767735  T
Q  256 ttccctgcaaaatttggcaagtgatgctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagct 355  Q
    |||||| || |  ||| ||||||||| |||  ||||  |  ||||||||||||||||||||||||||| || | ||||||||||||||| |||||||| |    
T  23767736 ttcccttcagagcttgacaagtgatgttatcgctcgttcgtcatttggaagtagttatgaagaaggaagaaaagtatttcaacttcaaatagagcaaggt 23767835  T
Q  356 gaacttatagtgaaagttgtcatgaaatctatcatccctttatggatgtaaga 408  Q
    ||||||||| |||||  | | ||||||||| | ||||||||||||| ||||||    
T  23767836 gaacttataatgaaaaatctaatgaaatctttaatccctttatggaggtaaga 23767888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 156 - 408
Target Start/End: Original strand, 23796805 - 23797057
Alignment:
Q  156 agattatgaccccggctttcttcataagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggcc 255  Q
    |||||||||| ||  | ||||| | ||| ||||| |||||||||| ||| |||||  ||| ||||||||||  |||| | | ||||||||| ||||||||    
T  23796805 agattatgacaccaacattcttgaaaagctgcaacgatttgattagcaattgggaagaaacgttgtcttcaagtggagcctctgaaatagacatatggcc 23796904  T
Q  256 ttccctgcaaaatttggcaagtgatgctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagct 355  Q
    |||||| || |  ||| ||||||||| |||  ||||  |  ||||||||||||||||||||||||||| || | ||||||||||||||| |||||||| |    
T  23796905 ttcccttcagagcttgacaagtgatgttatcgctcgttcgtcatttggaagtagttatgaagaaggaagaaaagtatttcaacttcaaatagagcaaggt 23797004  T
Q  356 gaacttatagtgaaagttgtcatgaaatctatcatccctttatggatgtaaga 408  Q
    ||||||||| |||||  | | ||||||||| | ||||||||||||| ||||||    
T  23797005 gaacttataatgaaaaatctaatgaaatctttaatccctttatggaggtaaga 23797057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 30393925 - 30393977
Alignment:
Q  15 agcatagaaagctaatcaaccctgctttccatttagaaaagttgaaggttagt 67  Q
    ||||||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  30393925 agcatagaaggctaatcaaccctgctttccatttagaacaattgaaggttagt 30393977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 30482170 - 30482222
Alignment:
Q  15 agcatagaaagctaatcaaccctgctttccatttagaaaagttgaaggttagt 67  Q
    ||||||||||| |||| || ||||| |||||||||||||| ||||||||||||    
T  30482170 agcatagaaagataataaatcctgcattccatttagaaaaattgaaggttagt 30482222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 299 - 363
Target Start/End: Original strand, 30403371 - 30403435
Alignment:
Q  299 tttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaacttat 363  Q
    |||||||| | ||||||||||||| ||||||||||| |||| | || ||| |||||| |||||||    
T  30403371 tttggaagcaattatgaagaaggacaaagaatatttgaactactaaaagaacaagctcaacttat 30403435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 125; Significance: 3e-64; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 171 - 363
Target Start/End: Complemental strand, 41628513 - 41628321
Alignment:
Q  171 ctttcttcataagttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaattt 270  Q
    ||||||||| ||||||||| ||||| ||||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||    
T  41628513 ctttcttcacaagttgcaacgatttaattagaaaatgggaggaaatgttgtctccagatggatcatgtgaaatagatatatggccttcccttcagaattt 41628414  T
Q  271 ggcaagtgatgctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaagagagcaagctgaacttat 363  Q
    ||| ||||||| ||||||||||||  |||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  41628413 ggcgagtgatgttatttctcgaacaacattcggaagtagttatgaagaaggaagaagaatatttcaacttcaaattgagcaagctgaacttat 41628321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 41628775 - 41628725
Alignment:
Q  15 agcatagaaagctaatcaaccctgctttccatttagaaaagttgaaggtta 65  Q
    ||||||||| |||||||||||| |||||||||| |||||| ||||||||||    
T  41628775 agcatagaaggctaatcaaccccgctttccattcagaaaaattgaaggtta 41628725  T

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Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 341
Target Start/End: Complemental strand, 15846242 - 15846083
Alignment:
Q  182 agttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgatg 281  Q
    |||||||||||  |||| | ||||||| ||  | | ||||| ||||||||| |||||||  | ||| | ||||||| ||| || |||||| |  ||||||    
T  15846242 agttgcaatgaaatgataagcaaatggaagggattattgtcatcagatggaacatgtgagcttgatgtttggcctttccttcagaatttgacctgtgatg 15846143  T
Q  282 ctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttc 341  Q
      |||||| |||| ||||||||||| || |||| |||||||  || ||||||||||||||    
T  15846142 taatttctagaacagcatttggaagcagctatgcagaaggagcaaaaatatttcaacttc 15846083  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 341
Target Start/End: Complemental strand, 15860431 - 15860272
Alignment:
Q  182 agttgcaatgatttgattaacaaatgggagaaaatgttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgatg 281  Q
    |||||||||||  |||| | ||||||| ||  | | ||||| ||||||||| ||||||| || ||| | ||||||||||| || |||||  |  ||||||    
T  15860431 agttgcaatgaaatgataagcaaatggaagggattattgtcatcagatggaacatgtgagattgatgtttggccttcccttcagaattttacctgtgatg 15860332  T
Q  282 ctatttctcgaaccgcatttggaagtagttatgaagaaggaaaaagaatatttcaacttc 341  Q
      |||||||| || ||||||||||| || || | |||||||| || | ||||||||||||    
T  15860331 taatttctcggacagcatttggaagcagctacgcagaaggaacaaaactatttcaacttc 15860272  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 340
Target Start/End: Complemental strand, 15853034 - 15852912
Alignment:
Q  218 ttgtcttcagatggatcatgtgaaatagatatatggccttccctgcaaaatttggcaagtgatgctatttctcgaaccgcatttggaagtagttatgaag 317  Q
    ||||| ||||||||| ||||||| || ||| | ||||||| ||| || |||||| |  ||||||  |||||||| || ||||||||||| || || | ||    
T  15853034 ttgtcatcagatggaacatgtgagattgatgtttggcctttccttcagaatttgacgtgtgatgtaatttctcggacagcatttggaagcagctacgcag 15852935  T
Q  318 aaggaaaaagaatatttcaactt 340  Q
    |||||| || | |||||||||||    
T  15852934 aaggaacaaaactatttcaactt 15852912  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 299 - 344
Target Start/End: Original strand, 11018087 - 11018132
Alignment:
Q  299 tttggaagtagttatgaagaaggaaaaagaatatttcaacttcaaa 344  Q
    ||||||||||| | |||||||||||||||| | |||||||||||||    
T  11018087 tttggaagtagctttgaagaaggaaaaagagtttttcaacttcaaa 11018132  T

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