View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8064_low_7 (Length: 317)
Name: NF8064_low_7
Description: NF8064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8064_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 5 - 269
Target Start/End: Complemental strand, 41989277 - 41989013
Alignment:
| Q |
5 |
agtttggtgttatggtcctgctctagtggtttaattcgactcgagaaaaagttgttgaatgaattagaaaatattttgaaaagggaaagagttgacgtgg |
104 |
Q |
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| T |
41989277 |
agtttggtgtcatggtcctgctctagtggtttaattcgactcgagaaaaagttgctgaatgaattagaaaatattttgaaaaaggaaagagttgacgtgg |
41989178 |
T |
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| Q |
105 |
ttttaatgttcaaggacgaaatcgtaatatgcaatactatcgcctgaaggttgtgaacagaagaaaaagaaataatgtcgttatgctccgtaatagtgca |
204 |
Q |
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| T |
41989177 |
ttttaatgttcaaggacgaaatcgtaatatacaatactatcgcctgaaggttgtgaacagaagaaaaagaaataatgtcgttatgctccgtaatagtgca |
41989078 |
T |
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| Q |
205 |
agacaatggatgtacgatccaattatcctgcaaggattggtaaatggatactacaagacattatt |
269 |
Q |
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| T |
41989077 |
agacaatggatgtacgatccaattatcctgcaaggattggtaaatggatactgcaagacattatt |
41989013 |
T |
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