View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8065_high_7 (Length: 249)
Name: NF8065_high_7
Description: NF8065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8065_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 35201139 - 35201371
Alignment:
| Q |
1 |
taacaacttgaaagaaaa-gaaaatgctatnnnnnnncttgacctaagttacattatttttgaattatatactatactaattaaattaaatattagaaaa |
99 |
Q |
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|||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35201139 |
taacaacttgaaagaaaaagaaaatgctataaaaaaacttgacctaagttacattatttttgaattatatactatactaattaaattaaatattagaaaa |
35201238 |
T |
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| Q |
100 |
ttttgaagtgggattttgccttattacaacatgcctagggctttgagcaggtcttagggattccctcaatgtatctctctgcacaaaagaatgttacgtt |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35201239 |
atttgaagtgggattttgccttattacaacatgcctagggctttgagcaggtcttagggattccctcaatgtatctctctgcacaaaagaatgttacgtt |
35201338 |
T |
|
| Q |
200 |
ggagtatatatgtgggtgtgtgttctttatttt |
232 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
35201339 |
ggagtatatatgtgggtgtgtgttctttatttt |
35201371 |
T |
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