View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8065_low_5 (Length: 303)

Name: NF8065_low_5
Description: NF8065
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8065_low_5
NF8065_low_5
[»] chr2 (5 HSPs)
chr2 (24-285)||(7702743-7703009)
chr2 (53-268)||(27150789-27151007)
chr2 (24-285)||(24479449-24479722)
chr2 (135-204)||(31481150-31481222)
chr2 (24-72)||(31481092-31481140)
[»] chr4 (2 HSPs)
chr4 (24-285)||(37750525-37750779)
chr4 (130-285)||(37744617-37744785)
[»] chr1 (7 HSPs)
chr1 (24-180)||(18308460-18308621)
chr1 (24-128)||(39367825-39367929)
chr1 (221-284)||(18308699-18308762)
chr1 (223-284)||(17113434-17113495)
chr1 (221-283)||(39367672-39367734)
chr1 (25-70)||(17113238-17113283)
chr1 (24-116)||(47694563-47694654)
[»] chr8 (5 HSPs)
chr8 (62-283)||(14997964-14998189)
chr8 (60-204)||(5001025-5001171)
chr8 (84-204)||(17634094-17634216)
chr8 (226-285)||(17633997-17634056)
chr8 (142-180)||(6223796-6223834)
[»] chr5 (3 HSPs)
chr5 (42-180)||(31571345-31571484)
chr5 (24-98)||(38449696-38449770)
chr5 (26-116)||(10869967-10870060)
[»] chr7 (5 HSPs)
chr7 (29-119)||(26608255-26608348)
chr7 (221-285)||(26620638-26620702)
chr7 (226-285)||(26618674-26618733)
chr7 (48-119)||(26618797-26618871)
chr7 (83-119)||(26620787-26620823)
[»] chr6 (2 HSPs)
chr6 (221-283)||(24631784-24631846)
chr6 (24-124)||(30129378-30129481)
[»] chr3 (1 HSPs)
chr3 (25-156)||(35083276-35083418)


Alignment Details
Target: chr2 (Bit Score: 155; Significance: 3e-82; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 7702743 - 7703009
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatatt 123  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  7702743 gtggattatcaataggagtttttgtactcaatctaccacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactacatt 7702842  T
Q  124 ttgat-----attagatcaacgattttggataacattataatgaaataagatatcctaactagtaataatcactttttccatcaa---annnnnnnnnaa 215  Q
    |||||      ||||||| | ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||   |         ||    
T  7702843 ttgatcaaaatttagatcgatgattttggataacattataatcaaataagatatcctaaccagtaataatcactttttccatcaaattaaaaaaaataaa 7702942  T
Q  216 aataaattagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatct 285  Q
    || |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||| |||||||    
T  7702943 aaaaaattagccatgagggaatctaaccaagctaatgcaacaaaaa---tctttgtttgcaaaaccatct 7703009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 53 - 268
Target Start/End: Complemental strand, 27151007 - 27150789
Alignment:
Q  53 aatccatcacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatattttgat-----attagatcaacgattttgg 147  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| ||      |||||||||| | |||||    
T  27151007 aatccaccacattgaatctagagattacataattgtttttacatgatccaagcaaatcaaaatactacattttcatcaaaatttagatcaacta-tttgg 27150909  T
Q  148 ataacattataatgaaataagatatcctaa------ctagtaataatcactttttccatcaaannnnnnnnnaaaataaattagccatgagggaatctaa 241  Q
    |||| |||  ||||||||||||||||||||      |||||||||||||||||||||| |||          || | |||||||||||||||| ||||||    
T  27150908 ataagattgcaatgaaataagatatcctaaataaacctagtaataatcactttttccaccaa-------caaaataaaaattagccatgaggggatctaa 27150816  T
Q  242 ccaagctaatgcaacaaaaatcttctt 268  Q
     |||| |||||||||||| ||||||||    
T  27150815 gcaagataatgcaacaaatatcttctt 27150789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 24479449 - 24479722
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataa---gtgtttttacatgatccaagcaaatcaaaatactat 120  Q
    ||||||| || ||||||||||||  |||||||||| |||||| |||||||| ||   ||||   |||||||||||| |||||||||| ||| |||||||     
T  24479449 gtggattgtctataggagttttttgactcaatccaccacattaaatctagaaatcatataacaagtgtttttacataatccaagcaa-tcacaatactac 24479547  T
Q  121 attttgatat-----tagatcaacgattttggataacattataatgaaataagatatcctaactag---taataatcactttttccatcaaannnnnnnn 212  Q
    |||| |||       |||||| |  ||||| |||||||||| || ||||||||||||||||||||    ||  |||||||||||||| ||||            
T  24479548 atttggatcaacacgtagatccatcattttagataacattacaaggaaataagatatcctaactaagcctagaaatcactttttccaccaaaatttacag 24479647  T
Q  213 n--aaaataaattagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatct 285  Q
       |||| ||  |||||||| | | |||||| ||||||||||||||||| |||||||| | ||||||||||||||    
T  24479648 ggtaaaaaaacctagccatgtgaggatctaagcaagctaatgcaacaaagatcttcttagattgcaacaccatct 24479722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 31481150 - 31481222
Alignment:
Q  135 tcaacgattttggataacattataatgaaataagatatcctaacta---gtaataatcactttttccatcaaa 204  Q
    ||||| |||||| ||||||  |||||||||||||||||||||||||    || ||||||||||||||| ||||    
T  31481150 tcaacaattttgaataacaagataatgaaataagatatcctaactaaacttactaatcactttttccaccaaa 31481222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 31481092 - 31481140
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatcta 72  Q
    |||||||||  |||||| |||||||| |||||||| |||||||||||||    
T  31481092 gtggattatttataggattttttgtagtcaatccaccacattgaatcta 31481140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 24 - 285
Target Start/End: Complemental strand, 37750779 - 37750525
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatatt 123  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||| ||     
T  37750779 gtggattatctataggagtttttgtactcaatccaccacattgaatctaaagattacataagtgtttttacatgatccaaacaattcaaaatactacat- 37750681  T
Q  124 ttgatattagatcaacgattttggataacattataa--tgaaataagatatcctaa------ctagtaataatcactttttccatcaaannnnnnnnnaa 215  Q
          ||||||||||||||||||||||||||| ||   |||||||||||||||||      ||||||||||||| |||||||| ||||         ||    
T  37750680 ------ttagatcaacgattttggataacattacaaatcgaaataagatatcctaactaaacctagtaataatcattttttccaacaaa--------aaa 37750595  T
Q  216 aataaattagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatct 285  Q
    || | ||||||||||| ||  ||||| |||||||||||||||||||||||||| | ||| ||||||||||    
T  37750594 aaaacattagccatgatggggtctaagcaagctaatgcaacaaaaatcttcttggcttgtaacaccatct 37750525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 285
Target Start/End: Complemental strand, 37744785 - 37744617
Alignment:
Q  130 ttagatcaacgattttggataacattataat--gaaataagatatcctaacta------gtaataatcactttttccatcaaannnnnnnnnaaaataaa 221  Q
    ||||||||||||||||||||||||||| ||   |||||||||||||| |||||      ||||||||||||||||||| ||||         ||||||||    
T  37744785 ttagatcaacgattttggataacattacaaatcgaaataagatatcccaactaaacctagtaataatcactttttccaccaaaatttaaaataaaataaa 37744686  T
Q  222 -----ttagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatct 285  Q
         ||||||||||||| |||||| ||||||||||||||||||||||| || | | ||||||||||||    
T  37744685 aaacattagccatgaggggatctaagcaagctaatgcaacaaaaatctttttggatcgcaacaccatct 37744617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 7e-46; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 18308460 - 18308621
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatatt 123  Q
    |||||||||| ||||||| | |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||    
T  18308460 gtggattatctataggagctgttgtactcaatccaccacattgaatctagaaattacataagtgtttttacatgatccaaacaaatcaaaatactacatt 18308559  T
Q  124 ttgat-----attagatcaacgattttggataacattataatgaaataagatatcctaacta 180  Q
    |||||      ||||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  18308560 ttgatcaaaatttagatcaacgattttggataacattgcaatgatataagatatcctaacta 18308621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 24 - 128
Target Start/End: Complemental strand, 39367929 - 39367825
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatatt 123  Q
    |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  39367929 gtggattatctataggagtttttttactcaatccaccacattgaatctagagattacataagtgtttttacatgatccaagcaaatcaaaatactacatt 39367830  T
Q  124 ttgat 128  Q
    |||||    
T  39367829 ttgat 39367825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 18308699 - 18308762
Alignment:
Q  221 attagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatc 284  Q
    |||||||||||||  |||||| ||||||||||||||| |||||||||| | |||||||||||||    
T  18308699 attagccatgaggtgatctaagcaagctaatgcaacagaaatcttcttggcttgcaacaccatc 18308762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 223 - 284
Target Start/End: Original strand, 17113434 - 17113495
Alignment:
Q  223 tagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatc 284  Q
    ||||| |||||| |||||| ||||||||||||||||||||||| || | |||||||| ||||    
T  17113434 tagccttgaggggatctaagcaagctaatgcaacaaaaatcttattggcttgcaacaacatc 17113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 39367734 - 39367672
Alignment:
Q  221 attagccatgagggaatctaaccaa-gctaatgcaacaaaaatcttctttgtttgcaacaccat 283  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||| ||| | ||||||||||||    
T  39367734 attagccatgaggga-tctaagcaaagctaatgcaacaaaaatctgcttggcttgcaacaccat 39367672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 17113238 - 17113283
Alignment:
Q  25 tggattatcaataggagtttttgtactcaatccatcacattgaatc 70  Q
    ||||||||| |||||||||||||| ||||||| | |||||||||||    
T  17113238 tggattatctataggagtttttgtgctcaatctaccacattgaatc 17113283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 47694654 - 47694563
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaata 116  Q
    |||||||||| |||||| |||||||  || ||||| |||||||||| |||| ||  |||||||  |||||||  |||||||||||||| ||||    
T  47694654 gtggattatctataggattttttgttgtctatcca-cacattgaatatagaaatcacataagtaattttacacaatccaagcaaatcacaata 47694563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 62 - 283
Target Start/End: Original strand, 14997964 - 14998189
Alignment:
Q  62 cattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatattttgat-----attagatcaacgattttggataacatta 156  Q
    ||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||| ||||||||      |||||||||||||||||||||||||||    
T  14997964 cattgaatctagaaattacgtaagtgtttttacatgatccaagcaaattaaaatactacattttgatcaaaatttagatcaacgattttggataacatta 14998063  T
Q  157 taatgaaataagatatcctaa------ctagtaataatcactttttccatcaaannnnnnnnnaaaat-aaattagccatgagggaatctaaccaagcta 249  Q
     ||||||||||||||||||||      ||||||||||||||||||||||  |||         ||||| ||||||||||||| |   ||||| |||||||    
T  14998064 caatgaaataagatatcctaactaaacctagtaataatcactttttccaaaaaa--------taaaataaaattagccatgaagtcttctaagcaagcta 14998155  T
Q  250 atgcaacaaaaatcttctttgtttgcaacaccat 283  Q
    ||||||||||||||||||| ||||||||||||||    
T  14998156 atgcaacaaaaatcttcttggtttgcaacaccat 14998189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 204
Target Start/End: Original strand, 5001025 - 5001171
Alignment:
Q  60 cacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatattttgatattagatcaacgattttggataacattataa 159  Q
    |||||||||| |||| ||  |||||||  |||||||  ||||||| |||||| |||| || |||| || ||| ||||||| |||||||||||||  ||||    
T  5001025 cacattgaatatagaaatcacataagtaattttacacaatccaaggaaatcacaatagtacatttgga-attggatcaacaattttggataacaagataa 5001123  T
Q  160 tgaaataagatatcctaacta---gtaataatcactttttccatcaaa 204  Q
    |||||||||||| | ||||||    || ||||||||||||||||||||    
T  5001124 tgaaataagataccttaactaaacctactaatcactttttccatcaaa 5001171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 17634216 - 17634094
Alignment:
Q  84 agtgtttttacatgatccaagcaaatcaaaatactatattttgat----at-tagatcaacgattttggataacattataatgaaataagatatcctaac 178  Q
    ||||| ||||||| ||||||| |||| | |||||||||||| |||    || | |||| || ||||||||||||||||  ||||||||||||||||||||    
T  17634216 agtgtctttacataatccaagaaaattacaatactatatttggatcaacatgttgatccacaattttggataacattactatgaaataagatatcctaac 17634117  T
Q  179 tagtaataatcactttttccatcaaa 204  Q
    |||   ||||||||||||||| ||||    
T  17634116 tag---taatcactttttccaccaaa 17634094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 17634056 - 17633997
Alignment:
Q  226 ccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatct 285  Q
    ||||||||| |||||| |||||||  ||| ||||||||||||| | ||||||||||||||    
T  17634056 ccatgaggggatctaagcaagctaccgcagcaaaaatcttcttggcttgcaacaccatct 17633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 180
Target Start/End: Original strand, 6223796 - 6223834
Alignment:
Q  142 ttttggataacattataatgaaataagatatcctaacta 180  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  6223796 ttttggatgacattacaatgaaataagatatcctaacta 6223834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 4e-32; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 42 - 180
Target Start/End: Original strand, 31571345 - 31571484
Alignment:
Q  42 tttttgtactcaatccatcacattgaatctagagattgcataagtgtttttacatgatccaagcaaatcaaaatactatattttgat-----attagatc 136  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||    ||||||||||||||||| ||||||||||  |||||||      |||||||    
T  31571345 tttttgtactcaatccaccacattgaatctagaaattacataagtg----tacatgatccaagcaaagcaaaatactactttttgatcaaaatttagatc 31571440  T
Q  137 aacgattttggataacattataatgaaataagatatcctaacta 180  Q
    ||| |||||||||||||||| |||||||||||||||||||||||    
T  31571441 aactattttggataacattacaatgaaataagatatcctaacta 31571484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 38449770 - 38449696
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataagtgtttttacatga 98  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||| ||| |||||||||||||||||||    
T  38449770 gtggattatctataggagtttttgtactcaatctaccacattgaatctagatattacataagtgtttttacatga 38449696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 10869967 - 10870060
Alignment:
Q  26 ggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcat---aagtgtttttacatgatccaagcaaatcaaaata 116  Q
    |||||||| ||||||||||||||| || ||||| ||||||||||||||| ||  |||   |||| ||||||||  |||||||||||||| ||||    
T  10869967 ggattatctataggagtttttgtagtctatccaccacattgaatctagaaatcacataacaagtatttttacacaatccaagcaaatcacaata 10870060  T

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Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 119
Target Start/End: Complemental strand, 26608348 - 26608255
Alignment:
Q  29 ttatcaataggagtttttgtactcaatccatcacattgaatctagagattgcataa---gtgtttttacatgatccaagcaaatcaaaatacta 119  Q
    ||||| |||| ||||||| ||||||||||| ||||||||||||| | ||| |||||   ||| |||||||||||||||||||||||||||||||    
T  26608348 ttatctatagcagtttttttactcaatccaccacattgaatctaaaaattacataacaagtgattttacatgatccaagcaaatcaaaatacta 26608255  T

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Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 26620702 - 26620638
Alignment:
Q  221 attagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatct 285  Q
    |||||||||||||| ||||||  ||||||||||||||||||||||||| | |||||||| |||||    
T  26620702 attagccatgaggggatctaagaaagctaatgcaacaaaaatcttcttggcttgcaacatcatct 26620638  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 26618733 - 26618674
Alignment:
Q  226 ccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccatct 285  Q
    |||||||||||||||| ||||||||||||| |||||| ||||| | ||||||||||||||    
T  26618733 ccatgagggaatctaagcaagctaatgcaagaaaaatattcttggcttgcaacaccatct 26618674  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 26618871 - 26618797
Alignment:
Q  48 tactcaatccatcacattgaatctagagattgcataa---gtgtttttacatgatccaagcaaatcaaaatacta 119  Q
    ||||| ||||| ||||||||||||||| ||| |||||   |||||||| ||| ||||||||||||||||||||||    
T  26618871 tactctatccaccacattgaatctagaaattacataacaagtgttttttcattatccaagcaaatcaaaatacta 26618797  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 119
Target Start/End: Complemental strand, 26620823 - 26620787
Alignment:
Q  83 aagtgtttttacatgatccaagcaaatcaaaatacta 119  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  26620823 aagtgtttttacatgatccaaggaaaccaaaatacta 26620787  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 24631846 - 24631784
Alignment:
Q  221 attagccatgagggaatctaaccaagctaatgcaacaaaaatcttctttgtttgcaacaccat 283  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||   ||||||||||||    
T  24631846 attagccatgaggggatctaagcaagctaatgcaacaaaaatcttcttgacttgcaacaccat 24631784  T

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Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Complemental strand, 30129481 - 30129378
Alignment:
Q  24 gtggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcat---aagtgtttttacatgatccaagcaaatcaaaatactat 120  Q
    |||||||||| ||| | ||||||||| |||||||||||||||||||||||| ||  |||   |||| ||||||||  |||||||||||||| || | |||    
T  30129481 gtggattatctataagtgtttttgtagtcaatccatcacattgaatctagaaatcacatcacaagtatttttacaaaatccaagcaaatcacaacattat 30129382  T
Q  121 attt 124  Q
    ||||    
T  30129381 attt 30129378  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 35083276 - 35083418
Alignment:
Q  25 tggattatcaataggagtttttgtactcaatccatcacattgaatctagagattgcata---agtgtttttacatgatccaagcaaatcaaaatactata 121  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||| ||  ||||   |||| |||||||| || |||| |||||| ||||||| |    
T  35083276 tggattatgtataagagtttttgtactcaatccaccacattgaatctagaaatcacataacgagtgcttttacataattcaagtaaatcacaatactaaa 35083375  T
Q  122 ttttga--------tattagatcaacgattttggataacatta 156  Q
    ||| ||        |||||||||||| ||||||||||||||||    
T  35083376 tttggatcaacatttattagatcaacaattttggataacatta 35083418  T

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