View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8069_low_24 (Length: 309)
Name: NF8069_low_24
Description: NF8069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8069_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 5 - 293
Target Start/End: Complemental strand, 27913484 - 27913196
Alignment:
| Q |
5 |
gctacattattcttccaacaatctcaacaattcttcaacctcaaactacactcattttcaacaaccacttgttgaggaacaaaaccatgttcctaatatt |
104 |
Q |
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| T |
27913484 |
gctaccttcttcttccaacaatctcaacaattcctcaacctcaaactacgctcattttcaacaaccacttgttgaggaacaaaaccatgttcctaatatt |
27913385 |
T |
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| Q |
105 |
tgtggtttttctggtttaccactttttccatctcaaaaccaacccaacagaaccagcaacagaaacagtaacagtaacataaattctgctactaatattg |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
27913384 |
tgtggtttttctggtttaccactttttccatctcaaaaccaacccaacagaaccagcaacagaaacagtaacagtaacataagttctgctactaatattg |
27913285 |
T |
|
| Q |
205 |
ttgatgttgttaactcttctacaccttctatgatggacgaaacatcagctacaacaaactggattgatgggattttgaaggatcttatt |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
27913284 |
ttgatgttgttaactcttctacaccttctatgatggacgaaacatcagctacaacaaactggattgatggtattttgaaggatcttatt |
27913196 |
T |
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