View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8069_low_34 (Length: 234)
Name: NF8069_low_34
Description: NF8069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8069_low_34 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 3502538 - 3502771
Alignment:
| Q |
1 |
caaaagcaaatccttgagcttaatcaggtggtaagccatttcatttagaaggaacaaaagcataatctaaatagaaaacaattcatttgcaccaaataag |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3502538 |
caaaagcaaatccttgagcttaatcaggtggtaagccatttcatttagaaggaacaaaagcataatctaaatagaaaacaattcatttgcaccaaataag |
3502637 |
T |
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| Q |
101 |
tatagaattgtctgatctgaattgaaaacaattctgctagaccgaagaagtgtaatgtcactttgtcttatttctatcatttcgcttgatagttgttgct |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3502638 |
tatagatttgtctgatctgaattgaaaacaattctgctagaccgaagaagtgtaatgtcactttgtcttatttctatcatttcgcttgatagttgttgct |
3502737 |
T |
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| Q |
201 |
tcgtctgatggtcaatttgtatgatttgaagaat |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
3502738 |
tcgtctgatggtcaatttgtatgatttgaagaat |
3502771 |
T |
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