View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8070_low_8 (Length: 218)

Name: NF8070_low_8
Description: NF8070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8070_low_8
NF8070_low_8
[»] chr2 (35 HSPs)
chr2 (1-204)||(1586899-1587102)
chr2 (1-200)||(3277061-3277260)
chr2 (1-204)||(28550785-28550987)
chr2 (1-204)||(31967910-31968112)
chr2 (1-204)||(40332118-40332321)
chr2 (5-204)||(22785522-22785720)
chr2 (1-204)||(34321793-34322005)
chr2 (1-204)||(44840465-44840664)
chr2 (1-157)||(22776202-22776357)
chr2 (1-157)||(22781580-22781735)
chr2 (1-204)||(33074257-33074469)
chr2 (2-204)||(35743859-35744068)
chr2 (83-204)||(31327822-31327944)
chr2 (83-204)||(31334543-31334665)
chr2 (1-169)||(22802491-22802668)
chr2 (1-95)||(14581546-14581640)
chr2 (1-204)||(20151891-20152104)
chr2 (1-175)||(28701115-28701298)
chr2 (1-204)||(28711554-28711767)
chr2 (75-204)||(30557176-30557306)
chr2 (75-204)||(31800744-31800873)
chr2 (75-204)||(6573979-6574109)
chr2 (95-191)||(1084141-1084238)
chr2 (75-204)||(6392748-6392878)
chr2 (1-200)||(45087043-45087253)
chr2 (41-142)||(23392596-23392697)
chr2 (127-204)||(22317760-22317839)
chr2 (127-202)||(24814458-24814533)
chr2 (83-174)||(19540538-19540631)
chr2 (1-55)||(22317624-22317678)
chr2 (125-204)||(24377265-24377346)
chr2 (1-190)||(23235038-23235238)
chr2 (108-190)||(25037128-25037212)
chr2 (108-190)||(25041235-25041319)
chr2 (75-156)||(22260520-22260603)
[»] chr8 (38 HSPs)
chr8 (1-204)||(6407755-6407957)
chr8 (2-204)||(14989370-14989572)
chr8 (2-204)||(18151575-18151767)
chr8 (1-204)||(43639812-43640015)
chr8 (1-204)||(13430546-13430750)
chr8 (1-204)||(15335998-15336210)
chr8 (1-204)||(15425063-15425275)
chr8 (1-204)||(15516367-15516579)
chr8 (5-204)||(36105228-36105436)
chr8 (1-204)||(40845298-40845509)
chr8 (5-204)||(21301055-21301254)
chr8 (1-204)||(22673807-22674019)
chr8 (1-204)||(21288432-21288635)
chr8 (1-204)||(22663145-22663357)
chr8 (1-204)||(17797451-17797663)
chr8 (1-200)||(24551303-24551511)
chr8 (85-204)||(3598256-3598375)
chr8 (2-204)||(1745190-1745392)
chr8 (1-190)||(33560157-33560346)
chr8 (1-204)||(23185136-23185348)
chr8 (75-204)||(9320681-9320811)
chr8 (52-203)||(21932972-21933125)
chr8 (75-204)||(45538349-45538478)
chr8 (75-204)||(1237749-1237878)
chr8 (78-204)||(24832966-24833093)
chr8 (75-190)||(30421352-30421467)
chr8 (148-204)||(43774053-43774109)
chr8 (108-191)||(21541090-21541175)
chr8 (1-56)||(16189013-16189068)
chr8 (1-56)||(16207335-16207390)
chr8 (141-204)||(19156376-19156439)
chr8 (108-204)||(28903586-28903685)
chr8 (82-190)||(39693654-39693764)
chr8 (1-55)||(18121177-18121231)
chr8 (79-204)||(12757671-12757798)
chr8 (12-56)||(21540984-21541028)
chr8 (127-204)||(23271044-23271123)
chr8 (85-174)||(33082979-33083070)
[»] chr3 (41 HSPs)
chr3 (1-204)||(46796288-46796490)
chr3 (1-204)||(49666326-49666528)
chr3 (1-204)||(21605574-21605777)
chr3 (1-204)||(21636590-21636793)
chr3 (1-204)||(40851004-40851207)
chr3 (1-198)||(21640903-21641108)
chr3 (2-204)||(30054137-30054339)
chr3 (1-204)||(14955463-14955675)
chr3 (1-204)||(1727936-1728138)
chr3 (1-204)||(24775443-24775657)
chr3 (75-204)||(2785184-2785313)
chr3 (1-190)||(20627356-20627554)
chr3 (52-157)||(5213672-5213777)
chr3 (1-204)||(11223599-11223811)
chr3 (1-173)||(9699989-9700159)
chr3 (1-191)||(47207742-47207942)
chr3 (1-204)||(53056638-53056850)
chr3 (82-204)||(2561314-2561438)
chr3 (75-204)||(11869187-11869316)
chr3 (1-204)||(29855445-29855658)
chr3 (1-204)||(46349755-46349967)
chr3 (108-204)||(15833539-15833637)
chr3 (1-157)||(22140800-22140965)
chr3 (95-202)||(12752539-12752647)
chr3 (77-190)||(47405346-47405459)
chr3 (95-203)||(51341142-51341251)
chr3 (127-204)||(10529499-10529577)
chr3 (76-190)||(40799994-40800108)
chr3 (127-204)||(28582277-28582356)
chr3 (1-56)||(45858817-45858872)
chr3 (1-204)||(33583265-33583479)
chr3 (95-188)||(45858674-45858768)
chr3 (95-191)||(11908946-11909043)
chr3 (1-56)||(11909092-11909147)
chr3 (1-204)||(14969363-14969577)
chr3 (82-204)||(18121531-18121655)
chr3 (119-204)||(33598014-33598099)
chr3 (127-204)||(50300373-50300450)
chr3 (1-52)||(2785100-2785152)
chr3 (135-203)||(49990416-49990484)
chr3 (12-56)||(51341050-51341094)
[»] chr1 (31 HSPs)
chr1 (1-198)||(10251022-10251218)
chr1 (1-204)||(46089025-46089228)
chr1 (1-204)||(21702850-21703061)
chr1 (1-204)||(48570064-48570275)
chr1 (1-202)||(21204765-21204967)
chr1 (1-204)||(44821377-44821589)
chr1 (1-204)||(21984632-21984835)
chr1 (3-204)||(21120904-21121106)
chr1 (1-204)||(21135000-21135204)
chr1 (1-204)||(42284664-42284866)
chr1 (1-204)||(25448396-25448610)
chr1 (75-204)||(2327271-2327400)
chr1 (1-190)||(30572233-30572430)
chr1 (1-194)||(37642284-37642477)
chr1 (1-204)||(35040202-35040414)
chr1 (2-204)||(2834727-2834937)
chr1 (80-191)||(7744935-7745046)
chr1 (1-204)||(39200824-39201036)
chr1 (75-201)||(22464643-22464770)
chr1 (111-190)||(29215952-29216031)
chr1 (127-201)||(22427192-22427266)
chr1 (1-204)||(19215648-19215847)
chr1 (127-204)||(21544184-21544262)
chr1 (1-70)||(23024824-23024893)
chr1 (141-204)||(19170182-19170245)
chr1 (75-157)||(2267208-2267290)
chr1 (1-174)||(22600042-22600226)
chr1 (108-204)||(17371177-17371274)
chr1 (84-190)||(20954317-20954425)
chr1 (1-52)||(2327432-2327484)
chr1 (75-200)||(32785772-32785898)
[»] chr5 (35 HSPs)
chr5 (1-204)||(28464241-28464443)
chr5 (1-190)||(9089002-9089190)
chr5 (2-186)||(25930075-25930259)
chr5 (1-200)||(3245338-3245545)
chr5 (5-204)||(10848810-10849009)
chr5 (1-204)||(15517002-15517214)
chr5 (1-204)||(26759182-26759394)
chr5 (5-204)||(35986133-35986331)
chr5 (1-204)||(4887055-4887267)
chr5 (1-204)||(11993921-11994133)
chr5 (1-204)||(29138300-29138510)
chr5 (1-204)||(35931906-35932110)
chr5 (1-204)||(30743013-30743225)
chr5 (119-200)||(30115772-30115853)
chr5 (75-204)||(42243797-42243926)
chr5 (75-204)||(33022780-33022909)
chr5 (1-204)||(21660245-21660448)
chr5 (75-204)||(5429999-5430129)
chr5 (95-204)||(32160902-32161012)
chr5 (1-204)||(14086429-14086643)
chr5 (75-204)||(33933384-33933516)
chr5 (95-203)||(25111777-25111886)
chr5 (95-203)||(25170868-25170977)
chr5 (75-169)||(31117993-31118088)
chr5 (1-204)||(23391506-23391707)
chr5 (1-132)||(26765531-26765670)
chr5 (2-53)||(30115889-30115940)
chr5 (140-201)||(23478535-23478596)
chr5 (84-204)||(23412866-23412986)
chr5 (83-204)||(41566324-41566447)
chr5 (141-204)||(26784538-26784601)
chr5 (1-99)||(28139640-28139747)
chr5 (1-56)||(7745742-7745797)
chr5 (1-56)||(32160799-32160854)
chr5 (84-174)||(89342-89434)
[»] chr4 (35 HSPs)
chr4 (1-204)||(17398552-17398754)
chr4 (1-204)||(6517516-6517728)
chr4 (1-204)||(10692882-10693094)
chr4 (1-204)||(10906648-10906860)
chr4 (6-204)||(40860703-40860901)
chr4 (1-204)||(22190877-22191081)
chr4 (1-204)||(15475019-15475223)
chr4 (1-169)||(3105323-3105499)
chr4 (104-204)||(14571167-14571267)
chr4 (1-204)||(39419612-39419814)
chr4 (1-204)||(413033-413245)
chr4 (1-190)||(54679961-54680157)
chr4 (1-204)||(9751416-9751620)
chr4 (85-204)||(17247367-17247486)
chr4 (1-173)||(20977488-20977658)
chr4 (1-193)||(38513909-38514102)
chr4 (1-173)||(27188548-27188718)
chr4 (82-185)||(55731900-55732003)
chr4 (1-148)||(29121401-29121557)
chr4 (1-204)||(3499531-3499732)
chr4 (124-204)||(3793286-3793366)
chr4 (104-204)||(16853626-16853726)
chr4 (1-204)||(19884733-19884946)
chr4 (1-129)||(16940047-16940183)
chr4 (44-203)||(17700680-17700835)
chr4 (5-130)||(25651046-25651180)
chr4 (82-190)||(13575996-13576104)
chr4 (52-204)||(8105729-8105882)
chr4 (1-201)||(3483752-3483963)
chr4 (52-175)||(56532957-56533081)
chr4 (1-204)||(3395621-3395835)
chr4 (1-56)||(37435560-37435615)
chr4 (127-202)||(33378561-33378636)
chr4 (75-157)||(37985525-37985609)
chr4 (83-175)||(22675417-22675509)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-204)||(17637-17839)
[»] chr7 (43 HSPs)
chr7 (1-204)||(27871751-27871955)
chr7 (1-204)||(48062742-48062945)
chr7 (1-202)||(19339174-19339375)
chr7 (1-204)||(14425480-14425682)
chr7 (2-204)||(21381350-21381552)
chr7 (5-204)||(32264639-32264839)
chr7 (1-190)||(2265446-2265644)
chr7 (1-200)||(8182963-8183170)
chr7 (1-204)||(4821507-4821718)
chr7 (5-157)||(15704459-15704620)
chr7 (78-204)||(48236815-48236941)
chr7 (5-162)||(14426584-14426750)
chr7 (3-204)||(16542933-16543143)
chr7 (3-204)||(16622519-16622729)
chr7 (2-200)||(4411888-4412086)
chr7 (1-157)||(24794683-24794840)
chr7 (5-204)||(48805801-48806000)
chr7 (1-123)||(1293063-1293184)
chr7 (87-204)||(28622269-28622386)
chr7 (1-204)||(16111797-16112009)
chr7 (1-204)||(35952600-35952813)
chr7 (84-204)||(4429000-4429120)
chr7 (1-203)||(19710925-19711138)
chr7 (75-204)||(12174253-12174382)
chr7 (82-203)||(9069685-9069808)
chr7 (84-204)||(21695526-21695648)
chr7 (125-204)||(33605852-33605931)
chr7 (104-170)||(7339821-7339887)
chr7 (1-169)||(30944271-30944448)
chr7 (83-204)||(44467188-44467312)
chr7 (82-190)||(9709729-9709837)
chr7 (165-204)||(5826170-5826209)
chr7 (83-204)||(2913519-2913642)
chr7 (79-204)||(15088640-15088767)
chr7 (1-56)||(33605718-33605773)
chr7 (111-169)||(30945304-30945362)
chr7 (108-204)||(331794-331893)
chr7 (127-204)||(30026073-30026152)
chr7 (82-203)||(33691624-33691747)
chr7 (1-56)||(23280028-23280083)
chr7 (82-189)||(10883099-10883208)
chr7 (3-56)||(15467951-15468004)
chr7 (144-204)||(39284476-39284536)
[»] scaffold1359 (2 HSPs)
scaffold1359 (1-204)||(1627-1829)
scaffold1359 (5-162)||(559-725)
[»] scaffold0056 (2 HSPs)
scaffold0056 (1-204)||(34675-34878)
scaffold0056 (1-204)||(25536-25739)
[»] chr6 (31 HSPs)
chr6 (1-204)||(21618281-21618493)
chr6 (1-204)||(19065927-19066130)
chr6 (1-204)||(22076307-22076519)
chr6 (1-204)||(16877250-16877462)
chr6 (1-204)||(33351829-33352038)
chr6 (1-194)||(16336164-16336366)
chr6 (5-174)||(12349034-12349211)
chr6 (1-204)||(15954740-15954952)
chr6 (1-198)||(19832938-19833145)
chr6 (1-203)||(20487818-20488030)
chr6 (2-204)||(26589638-26589842)
chr6 (1-173)||(17316467-17316637)
chr6 (1-130)||(12423298-12423435)
chr6 (75-204)||(16265050-16265179)
chr6 (75-204)||(20730604-20730733)
chr6 (111-204)||(21235269-21235362)
chr6 (127-204)||(22386958-22387035)
chr6 (111-200)||(22802297-22802386)
chr6 (83-200)||(26972130-26972249)
chr6 (1-204)||(32544302-32544516)
chr6 (100-204)||(17608223-17608329)
chr6 (117-204)||(139268-139355)
chr6 (117-204)||(147289-147376)
chr6 (1-64)||(19482789-19482852)
chr6 (79-204)||(34451569-34451693)
chr6 (108-204)||(20635855-20635956)
chr6 (1-56)||(15531681-15531736)
chr6 (141-204)||(19086336-19086398)
chr6 (141-204)||(21128396-21128459)
chr6 (1-38)||(17381558-17381595)
chr6 (108-174)||(19624132-19624200)
[»] scaffold0414 (1 HSPs)
scaffold0414 (1-203)||(7019-7230)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-204)||(9192-9403)
[»] scaffold0352 (1 HSPs)
scaffold0352 (1-200)||(696-895)
[»] scaffold0471 (1 HSPs)
scaffold0471 (5-204)||(3345-3553)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-204)||(60840-61052)
[»] scaffold0217 (2 HSPs)
scaffold0217 (1-204)||(9597-9808)
scaffold0217 (1-204)||(21993-22205)
[»] scaffold0473 (1 HSPs)
scaffold0473 (41-204)||(2574-2736)
[»] scaffold0011 (4 HSPs)
scaffold0011 (19-204)||(65291-65484)
scaffold0011 (19-204)||(144336-144529)
scaffold0011 (95-203)||(164808-164917)
scaffold0011 (1-56)||(164965-165020)
[»] scaffold0527 (2 HSPs)
scaffold0527 (1-204)||(7969-8180)
scaffold0527 (87-204)||(1-117)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-204)||(6602-6814)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-204)||(215359-215571)
[»] scaffold0247 (2 HSPs)
scaffold0247 (77-204)||(23425-23551)
scaffold0247 (1-53)||(25421-25473)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-204)||(78228-78440)
[»] scaffold0069 (1 HSPs)
scaffold0069 (6-190)||(5209-5393)
[»] scaffold0005 (1 HSPs)
scaffold0005 (104-204)||(246109-246209)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-156)||(211435-211599)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-204)||(7418-7621)
[»] scaffold0028 (1 HSPs)
scaffold0028 (13-204)||(5461-5664)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-169)||(87506-87674)
[»] scaffold0035 (1 HSPs)
scaffold0035 (1-204)||(99070-99279)
[»] scaffold0003 (1 HSPs)
scaffold0003 (122-204)||(89917-89999)
[»] scaffold0207 (2 HSPs)
scaffold0207 (18-203)||(20675-20859)
scaffold0207 (18-203)||(10774-10958)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-203)||(207-419)
[»] scaffold0227 (1 HSPs)
scaffold0227 (13-201)||(22725-22924)
[»] scaffold1331 (2 HSPs)
scaffold1331 (1-163)||(1602-1773)
scaffold1331 (165-204)||(473-512)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-97)||(2700-2804)
[»] scaffold0297 (1 HSPs)
scaffold0297 (95-203)||(17088-17197)
[»] scaffold0151 (1 HSPs)
scaffold0151 (41-204)||(11447-11610)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-204)||(761-962)
[»] scaffold0570 (1 HSPs)
scaffold0570 (127-204)||(1539-1617)
[»] scaffold0177 (1 HSPs)
scaffold0177 (127-204)||(20254-20332)
[»] scaffold0132 (2 HSPs)
scaffold0132 (107-203)||(37947-38044)
scaffold0132 (1-56)||(38104-38159)
[»] scaffold0022 (2 HSPs)
scaffold0022 (141-206)||(39613-39678)
scaffold0022 (141-206)||(137673-137738)
[»] scaffold0050 (1 HSPs)
scaffold0050 (140-204)||(35402-35466)
[»] scaffold0422 (1 HSPs)
scaffold0422 (100-204)||(11888-11994)
[»] scaffold0251 (1 HSPs)
scaffold0251 (82-198)||(7830-7948)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-56)||(15641-15696)
[»] scaffold0220 (1 HSPs)
scaffold0220 (1-56)||(1816-1871)
[»] scaffold0161 (1 HSPs)
scaffold0161 (83-190)||(9981-10091)
[»] scaffold0018 (1 HSPs)
scaffold0018 (127-202)||(6402-6477)
[»] scaffold0007 (1 HSPs)
scaffold0007 (141-204)||(143276-143339)
[»] scaffold0210 (1 HSPs)
scaffold0210 (83-174)||(1788-1881)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-55)||(103609-103663)
[»] scaffold0908 (1 HSPs)
scaffold0908 (161-202)||(3776-3817)
[»] scaffold0269 (1 HSPs)
scaffold0269 (161-202)||(7473-7514)
[»] scaffold0261 (1 HSPs)
scaffold0261 (125-202)||(5801-5880)


Alignment Details
Target: chr2 (Bit Score: 164; Significance: 8e-88; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 1587102 - 1586899
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |    
T  1587102 cttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgcctttcaaaatagccgttgtaatactttttcagtcttctgcaatcttca 1587003  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| | ||| |||||||||||| |||||||||||||||||| ||||    
T  1587002 gatgagtttgaatcctttaaacaacttttgaagctttaagttccatctcctgatgaactccagcttctggtgattctcagcttctgatgaacttgtttct 1586903  T
Q  201 gatg 204  Q
    ||||    
T  1586902 gatg 1586899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 3277061 - 3277260
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |    
T  3277061 cttcgtacaaacgtactatatcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgttatactttttcagtcttctgcaatcttca 3277160  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    ||  ||||||||| |||||||||||||||||| ||||||||| |||||||| ||||| | ||| |||| ||||||| |||||||||||||||||||||||    
T  3277161 gacaagtttgaattctttaaacaacttttgaagctttaagttccatctcctaatgaactccagcttctagtgattcccagcttctgatgaacttgcttct 3277260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 28550987 - 28550785
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||  |||   |||||||| |||||||||||||| |||     
T  28550987 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgtttctatacttttccagtcttctgcaattttag 28550888  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| ||||| |||||||   ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |    
T  28550887 gc-gagtttgaatccttgaaacagcttttgaggttttaaattgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttat 28550789  T
Q  201 gatg 204  Q
    ||||    
T  28550788 gatg 28550785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 31968112 - 31967910
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||| || ||||||||  ||||  |||||||| |||||||||||||| |||     
T  31968112 cttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagttgttgctatacttttccagtcttctgcaattttat 31968013  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| |||||||||||||  ||||||||||||||| |||||||| ||||| ||||||||||||||| ||||| ||||||||||||||    
T  31968012 gc-gagtttgaatccttgaaacaacttttgaggctttaagttgcatcttctgatgaactgcagcttctggtgattcacaacttcttatgaacttgcttct 31967914  T
Q  201 gatg 204  Q
    ||||    
T  31967913 gatg 31967910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 40332118 - 40332321
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||  |||||||| |||||||||||||| || |    
T  40332118 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttccagtcttctgcaat-ttta 40332216  T
Q  101 gatgagtttgaatcctttaaa-caacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
    |  |||||||||||||  ||| || ||||  || ||||  ||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||     
T  40332217 ggcgagtttgaatcctagaaagcagctttgaaagctttgggttacatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgctta 40332316  T
Q  200 tgatg 204  Q
    |||||    
T  40332317 tgatg 40332321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 22785720 - 22785522
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatg 104  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||  |||| ||| |||| ||||||||| ||| |  |    
T  22785720 gtacaaaagtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgctatacatttccagttttctgcaattttaggc-g 22785622  T
Q  105 agtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||  ||| ||| | |||||||| |||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||| |||||    
T  22785621 agtttgaaatcttgaaatagcttttgaagctttaagttgcatctcctgatgaactgtagcttctggtgattcacagcttctgatgaacttgcttttgatg 22785522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 34322005 - 34321793
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaa---------aatagccgttgtaatactttttcagtcttctg 91  Q
    |||| ||||||||||||||||||| |||||||||||||| || |||||||||||| |||         ||||| |||||  |||||||| ||| ||||||    
T  34322005 cttcatacaaacgtactatgtcaacgctctttgaagaataagaatccaatgcctttcaatcctttcaaaatagtcgttgctatacttttccaggcttctg 34321906  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||||||||||| |||||||  |||||||||||||||||||||||| | ||| |||| ||||||| ||||||||||| ||    
T  34321905 caatctttagacgagtttgaatcctttaaacagcttttgaggctttaagttgcatctcctgatgaattacagcttctagtgattctcagcttctgataaa 34321806  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  34321805 cttgcttctgatg 34321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 44840465 - 44840664
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||  |||||||||||||| |||||||| || |    
T  44840465 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatactttttcagtc-tctgcaatgtt-a 44840562  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| ||||| |||||||| |||||||||||||||| ||||||| ||||| ||||| ||| |    ||||||||||| |||||||||    
T  44840563 ggcgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcttgatgaactgcagcttctgatgaat--ttgcttctgatgatcttgcttct 44840660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 22776357 - 22776202
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||  |||||| |||||| || |    
T  22776357 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttcaagtcttttgcaat-ttta 22776259  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaa 157  Q
    |  |||| |||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  22776258 ggcgagtctgaaaccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 22776202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 22781735 - 22781580
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||  |||||| |||||| || |    
T  22781735 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgctatacttttcaagtcttttgcaat-ttta 22781637  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaa 157  Q
    |  |||| |||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  22781636 ggcgagtctgaaaccttgaaacaacttttgaagctttaagttgcatctcctgatgaa 22781580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 33074257 - 33074469
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaa---------aatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||| |||| |||||||| | | |||||||||| |||||| ||||||||||||         ||||| |||||  |||||||| ||||||||||    
T  33074257 cttcgtacaatcgtattatgtcaacgttttttgaagaataagcatctaatgccttccaatctgtccaaaatagtcgttgctatacttttccagtcttctg 33074356  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||||||||||| ||||||||  ||||||||||||||||||||||| | ||  |||| ||||||| ||||||||||| ||    
T  33074357 caatctttagacgagtttgaatcctttaaacagcttttgaagttttaagttgcatctcctgatgaactacaacttctagtgattctcagcttctgataaa 33074456  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  33074457 cttgcttctgatg 33074469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 35744068 - 35743859
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgc 92  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||         |||||||| |||||  |||||||| || | ||||||    
T  35744068 ttcgtacaaacgtactatgtcaacgctctttgaagaattagcattcaatgccttcaaatccttccaaaatagtcgttgctatacttttccaatattctgc 35743969  T
Q  93 aatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac 192  Q
    |||||| ||| |  ||||| ||  |||||||||||||||  |||||||||||||||||||||||| | ||| |||||||||||  ||||||| ||| |||    
T  35743968 aatctttagacg--tttgagtctgttaaacaacttttgacgctttaagttgcatctcctgatgaactacagcttctggtgattttcagcttccgataaac 35743871  T
Q  193 ttgcttctgatg 204  Q
    ||||||||||||    
T  35743870 ttgcttctgatg 35743859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 31327944 - 31327822
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaactttt-gaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    |||||||||||||||| ||  |||||||||||| || |||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  31327944 agtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagc 31327845  T
Q  182 ttctgatgaacttgcttctgatg 204  Q
    ||||||| |||||||||||||||    
T  31327844 ttctgataaacttgcttctgatg 31327822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 31334665 - 31334543
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaactttt-gaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    |||||||||||||||| ||  |||||||||||| || |||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  31334665 agtcttctgcaatctttaggcgagtttgaatccgttgaacaactttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagc 31334566  T
Q  182 ttctgatgaacttgcttctgatg 204  Q
    ||||||| |||||||||||||||    
T  31334565 ttctgataaacttgcttctgatg 31334543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 22802491 - 22802668
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| ||||||  ||||||||||||| ||||||  ||||||||         |||||||||| |||   ||| |||  |||||||||    
T  22802491 cttcgtacaaacgtactttgtcaactctctttgaagaataagcatcatatgccttcaaatcctttcaaaatagccattgctttacctttctagtcttctg 22802590  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctg 169  Q
    ||||||| ||| |||||||||||| ||||| | ||||||||||||||||||||||||||||||||| ||||| |||||    
T  22802591 caatctttagacgagtttgaatccattaaatagcttttgaatctttaagttgcatctcctgatgaactgcaggttctg 22802668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14581546 - 14581640
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaat 95  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||  ||| |||| ||||||||||||||    
T  14581546 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatatttttccagtcttctgcaat 14581640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 20152104 - 20151891
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||         |||| || ||||||    |||||| ||||||||||    
T  20152104 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactaaccgttgcttcacttttccagtcttctg 20152005  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaa-gttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||||  | ||| ||| || ||||| || ||||||||||||| |||||| |||||||||||||||||  ||||| |||||||||||  |||||||||||||    
T  20152004 caatgcttagacgagattaaatccattgaacaacttttgaagctttaatgttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatga 20151905  T
Q  191 acttgcttctgatg 204  Q
    ||||| ||||||||    
T  20151904 acttgtttctgatg 20151891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 28701298 - 28701115
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||| |||| |||||| || ||||||||||  ||||||||||||||||         ||||||| | ||||   ||||||| ||||||||||    
T  28701298 cttcgtacaaacttactttgtcaacgccctttgaagaacaagcatccaatgccttcaaatcctttcaaaatatctgttgctttacttttccagtcttctg 28701199  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgatt 175  Q
    ||||||||||| ||| |||||||  ||||||| |||||||| | |||||||||||| | ||||||| ||||| |||||||||||    
T  28701198 caatcttaagacgaggttgaatctattaaacagcttttgaagccttaagttgcatcccatgatgaactgcagcttctggtgatt 28701115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 28711767 - 28711554
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaa---------aatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| | |||| |||||||||||||  |||||||||||||||| ||         ||||| |||||   ||||||| ||||||||||    
T  28711767 cttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaattcattcgaaatagtcgttgctttacttttccagtcttctg 28711668  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga-ttcacagcttctgatga 190  Q
    ||||||| |||  || |||||||| ||||||| |||||||| | |||||||||||| | | ||||| ||||| ||||||||| ||    ||||||||| |    
T  28711667 caatctttagacaaggttgaatccattaaacagcttttgaagccttaagttgcatcccattatgaactgcagcttctggtgattttttggcttctgataa 28711568  T
Q  191 acttgcttctgatg 204  Q
    ||||||||||||||    
T  28711567 acttgcttctgatg 28711554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 30557306 - 30557176
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcct-ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |||||||||||| ||||||||| | ||| ||| ||||||||  |||||||| ||||||| | ||||||||||||  |||||||| ||||| |||||||||    
T  30557306 actttttcagtcctctgcaatccttagacgaggttgaatcccattaaacaatttttgaagccttaagttgcatcctctgatgaactgcagcttctggtga 30557207  T
Q  174 ttcacagcttctgatgaacttgcttctgatg 204  Q
    |    ||||||||||||||||||||||||||    
T  30557206 tatttagcttctgatgaacttgcttctgatg 30557176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 31800873 - 31800744
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| ||||||||||||||    ||| ||||||| ||||  ||| || |||||||| |||||||||||||| | ||||||| ||||||||||||||||    
T  31800873 acttttccagtcttctgcaataaatagacgagtttggatccactaagcagcttttgaagctttaagttgcatcccatgatgaactgcagtttctggtgat 31800774  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |    ||||||||| |||||||||||||||    
T  31800773 tatttgcttctgataaacttgcttctgatg 31800744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 6574109 - 6573979
Alignment:
Q  75 actttttcagtcttctgcaat-cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |||||| |||||||||||||| | | ||| ||| || ||||  || |||||| |||||| ||||| ||||||||| |||||||| ||||  |||| ||||    
T  6574109 acttttccagtcttctgcaatgcattagacgagattaaatcaattgaacaacctttgaagctttatgttgcatcttctgatgaactgcaacttctagtga 6574010  T
Q  174 ttcacagcttctgatgaacttgcttctgatg 204  Q
    ||  |||||||||||||||||||||||||||    
T  6574009 ttttcagcttctgatgaacttgcttctgatg 6573979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 1084141 - 1084238
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||| ||| |||||||||||||||||||| || ||||||  |||| ||||||||| |||||||| | ||||||||||||||  |||||||||||||||    
T  1084141 tctttagacgagtttgaatcctttaaacagctatttgaaagtttaggttgcatcttctgatgaactacagtttctggtgatatacagcttctgatgaa 1084238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 6392748 - 6392878
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatc-ctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |||||| ||||||||||||||| | ||| ||| ||||||| | ||||||| |||||||| | ||||| ||||||  |||||||| ||||  || ||||||    
T  6392748 acttttccagtcttctgcaatccttagacgaggttgaatcacattaaacagcttttgaagccttaagatgcatcctctgatgaactgcaacttatggtga 6392847  T
Q  174 ttcacagcttctgatgaacttgcttctgatg 204  Q
    ||   |||||||||| |||||||||||||||    
T  6392848 tttttagcttctgataaacttgcttctgatg 6392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 45087253 - 45087043
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||  ||||| |||||| ||||| |||         |||||||| |||||    |||||| ||||||||||    
T  45087253 cttcgtacaaacgtactttgtcaacgctcttttgagaataagcatctaatgcattcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 45087154  T
Q  92 caatcttaagatgagtttgaatcct-ttaaacaactttt-gaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    ||||| | ||| ||| ||||||||  ||||||||||||| ||| ||||||||||||||  |||||||| || || |||| |||||    ||||||||||     
T  45087153 caatccttagacgaggttgaatcccattaaacaactttttgaagctttaagttgcatcctctgatgaactgtagcttctagtgatatttagcttctgata 45087054  T
Q  190 aacttgcttct 200  Q
    |||||||||||    
T  45087053 aacttgcttct 45087043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 23392697 - 23392596
Alignment:
Q  41 agcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag 140  Q
    |||||||||||| || ||||||||||||||  |||||||| |||||||||| ||| |  ||  ||||| || ||||| |||||||||||||| |||| ||    
T  23392697 agcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgtaatttctaggcgagttagagtccttgaaacaacttttgaaactttgag 23392598  T
Q  141 tt 142  Q
    ||    
T  23392597 tt 23392596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 22317760 - 22317839
Alignment:
Q  127 tttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||| ||||||||  |||||||| |||||||||  || |||||||||||  |||||||||||| |||||||| |||||    
T  22317760 tttgaagctttaagtcttgcatctcttgatgaaatagagcttctggtgattttcagcttctgatgtacttgcttatgatg 22317839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 24814533 - 24814458
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctga 202  Q
    |||||| ||| | ||||||||| |||||||| | ||||||||||||||  |||||||||||| || | ||||||||    
T  24814533 tttgaaacttcaggttgcatcttctgatgaacttcagtttctggtgatatacagcttctgatcaaatggcttctga 24814458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 19540538 - 19540631
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||||||||||  | ||||||| || ||||| || |||||| |||||| |||||||  ||||||||| ||||||| | ||| ||||||||||    
T  19540538 agtcttctgcaatgcttagatgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcatgatgaacttcagcttctggtgat 19540631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22317624 - 22317678
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt 55  Q
    ||||||||||  ||||| |||||| |||||||||||||  |||||||||||||||    
T  22317624 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 22317678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 24377265 - 24377346
Alignment:
Q  125 cttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||| ||||||||  |||||||| ||||||| | ||| ||||||||||    |||||||||||||||| |||||||||    
T  24377265 cttttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatctttagcttctgatgaactttcttctgatg 24377346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 23235038 - 23235238
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| ||||||  |||||  |||||| ||||||||||||||||         |||||||| |||||   |||| || ||||||||||    
T  23235038 cttcgtacaattgtactttgtcaacactcttcaaagaataagcatccaatgccttcaaattctttcaaaatagtcgttgctttactcttccagtcttctg 23235137  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    ||||  | ||| ||| || ||||| || |||| | |||||| ||||||||  |||||||| ||||||| |  || |||||||||||  ||||||||||||    
T  23235138 caatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcatgatgaactagagcttctggtgattttcagcttctgatg 23235237  T
Q  190 a 190  Q
    |    
T  23235238 a 23235238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 25037212 - 25037128
Alignment:
Q  108 ttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    |||||||| || |||||| |||||| ||||||||  |||||||||||||||| | ||  ||||||||||   |||||||||||||    
T  25037212 ttgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 25037128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 25041319 - 25041235
Alignment:
Q  108 ttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    |||||||| || |||||| |||||| ||||||||  |||||||||||||||| | ||  ||||||||||   |||||||||||||    
T  25041319 ttgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacaacttctggtgatcttcagcttctgatga 25041235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 22260520 - 22260603
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatga 156  Q
    |||||| ||||||||||||||  | ||| ||| || ||||| || ||||||||||||  |||||||  ||||||||||||||||    
T  22260520 acttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacttttgacgctttaagtcttgcatctcctgatga 22260603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 5e-83; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 6407755 - 6407957
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  6407755 cttcgtagaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatacttttccagtcttctgcaatctt-a 6407853  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    || |||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||| |    
T  6407854 gacgagtttgaatcctttaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacaacttctgatgaacttgctttt 6407953  T
Q  201 gatg 204  Q
    ||||    
T  6407954 gatg 6407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 14989572 - 14989370
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaag 101  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||| |||||||| || ||||| |||||||| ||    
T  14989572 ttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttccaaattagccgttgttatacttttccaatcttcagcaatcttcag 14989473  T
Q  102 atgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
    | |||||||||||||||||||  |||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  14989472 acgagtttgaatcctttaaacggcttttgaagctttaagttgcatctcctgatgaattgcagcttctggtgattcacagcttctgatgaacttgcttctg 14989373  T
Q  202 atg 204  Q
    |||    
T  14989372 atg 14989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 18151767 - 18151575
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaag 101  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||| ||||||||||||||||| ||    
T  18151767 ttcgtacaaacgtactatgtcaatgctctttgaagaataagcatccaatgccttccaaattagtcgttgttatacttttccagtcttctgcaatcttcag 18151668  T
Q  102 atgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
    | |||||||||||          |||||||| ||||||||||||||| |||||||| ||||  |||||||||||||||||||||||||||||||||||||    
T  18151667 acgagtttgaatc----------cttttgaagctttaagttgcatcttctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctg 18151578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 43639812 - 43640015
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||| ||||||||  ||||||| |||||||||| ||| ||||| ||||||||| |||||||| |||||| |||||||| ||||||| |||||| || |    
T  43639812 cttcgtgcaaacgtaacatgtcaacgctctttgaaaaataagcattcaatgcctttcaaaatagtcgttgtcatacttttccagtcttttgcaattttta 43639911  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||  |||||||||| |||||||||||||||  ||||||||    
T  43639912 ggcgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcatgatgaactgcatcttctggtgatacacagcttctgatgattttgcttct 43640011  T
Q  201 gatg 204  Q
    ||||    
T  43640012 gatg 43640015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13430750 - 13430546
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||| || ||||||||||||||| ||||||||  | ||||||||||| |  |    
T  13430750 cttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagccgttgtcatacttttctaatcttctgcaatttcta 13430651  T
Q  101 gatgagtttgaatcctttaaacaacttttg-aatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
    |  ||||| || ||||| ||||| |||||| || ||||||||| |||||||||||||| || || |||||||||| ||||||||||||||||||||||||    
T  13430650 ggcgagttagagtccttgaaacagcttttgaaaactttaagttccatctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgcttc 13430551  T
Q  200 tgatg 204  Q
    |||||    
T  13430550 tgatg 13430546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15336210 - 15335998
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||         |||||||| |||||    ||||| |||||||||||    
T  15336210 cttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtcttctg 15336111  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||| ||    
T  15336110 caatctttagacgagtttgattccattaaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaa 15336011  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  15336010 cttgcttctgatg 15335998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15425275 - 15425063
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||         |||||||| |||||    ||||| |||||||||||    
T  15425275 cttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtcttctg 15425176  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||| ||    
T  15425175 caatctttagacgagtttgattccattaaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaa 15425076  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  15425075 cttgcttctgatg 15425063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15516579 - 15516367
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||||| |||| ||||||||||||||||         |||||||| |||||    ||||| |||||||||||    
T  15516579 cttcgtacaaacgtactttgtcaacgctctttgacgaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttctcagtcttctg 15516480  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||| ||| |||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||| ||    
T  15516479 caatctttagacgagtttgattccattaaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaa 15516380  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  15516379 cttgcttctgatg 15516367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 36105228 - 36105436
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctgcaat 95  Q
    ||||||||||||||| |||| |||||||||||||| | |||||||||||||         |||||||||||||||| |||||||| || |||||||||||    
T  36105228 gtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgttatacttttccaatcttctgcaat 36105327  T
Q  96 cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttg 195  Q
    ||| ||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |  || |||||||||||  ||||||||||| ||||||    
T  36105328 ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttg 36105427  T
Q  196 cttctgatg 204  Q
    |||||||||    
T  36105428 cttctgatg 36105436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 40845509 - 40845298
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaa---------aatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||         ||||| |||||  |||||||| ||||||||||    
T  40845509 cttcgtacaatcgtactatgtcaacgctctttgaagaataagcatccaatgccttccaatccttccaaaatagtcgttgctatacttttccagtcttctg 40845410  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||||| |  || ||||||||| ||  |||||||||| ||    
T  40845409 caatctttagacgagtttgaatcctt-aaacaacttttgaagctttaagctgcatctcctgatgaactatagcttctggtgagtcttagcttctgataaa 40845311  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  40845310 cttgcttctgatg 40845298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 21301055 - 21301254
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatg 104  Q
    |||||||||||||||||||| ||||||||| || | |||||||||||| || ||||||||||||||  |||||||| || |||||||||||||| ||  |    
T  21301055 gtacaaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgccatacttttccaatcttctgcaatctttaggcg 21301154  T
Q  105 agtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||| || || || ||||| |||||||| |||| ||||  || |||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  21301155 agttagagtcattgaaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctgatg 21301254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 22673807 - 22674019
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg---------ccttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||         |||||||||||||  ||||  ||||||||  |||||||||    
T  22673807 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatccttccaaaatagatgttgctatacttttctagtcttctg 22673906  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||  ||| |||||||||||| |||||||||||||||| ||||||||||||||||| |||||| | ||  ||||||||||   ||||||||||| ||    
T  22673907 caatctccagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctccggatgaactacaacttctggtgatcttcagcttctgataaa 22674006  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  22674007 cttgcttctgatg 22674019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21288432 - 21288635
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||| |||||||||| ||||||||| || | |||||||||| | || ||||||||||||||  |||||||| ||||||||||||||||| |    
T  21288432 cttcgtacaaacgaactatgtcaacgctctttgaggagtaagcatccaatacatttcaaaatagccgttgccatacttttccagtcttctgcaatcttta 21288531  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||  | |||||| |||||||||||| ||||  || |||||||||| ||||| || ||||||| |||||||||||||||||||||||||    
T  21288532 ggcgagttagagtcaatgaaacaaattttgaatctttgagttcaatttcctgatgaactgcagcttgtggtgatacacagcttctgatgaacttgcttct 21288631  T
Q  201 gatg 204  Q
    ||||    
T  21288632 gatg 21288635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 22663145 - 22663357
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||         ||||||||  ||||  ||| |||| ||||||||||    
T  22663145 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgtcttctaatctttccaaaatagttgttgctatatttttccagtcttctg 22663244  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| ||||||| |||||||| |||||||||||||||||| ||||| | ||  |||| |||||   |||||||| || ||    
T  22663245 caatcttcagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctaatgaactacaacttctagtgatcttcagcttctaataaa 22663344  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  22663345 cttgcttctgatg 22663357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 17797451 - 17797663
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||         |||| ||||||||| |  |||||| ||||||||||    
T  17797451 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaattcctttcaaactagccgttgcatcacttttccagtcttctg 17797550  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
     |||  | ||| ||| |||||||| || ||||||||||||  |||||||||||||||||||||||  ||||| |||||||||||  ||||||||||||||    
T  17797551 taatggttagacgagattgaatccattgaacaacttttgaggctttaagttgcatctcctgatgagctgcagcttctggtgattttcagcttctgatgaa 17797650  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  17797651 cttgcttctgatg 17797663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 24551303 - 24551511
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||||||| || |||||||||||||  ||||||||||||||||         |||||||| |||||    |||||| ||||||||||    
T  24551303 cttcgtacaaacgtactatgttaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcgttgcttcacttttccagtcttctg 24551402  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| ||| |||||||| |||||||||||||||| | |||||||||||| | ||||||| ||||| |||||||||||    ||||||||| ||    
T  24551403 caatctttagacgaggttgaatccattaaacaacttttgaagccttaagttgcatcccatgatgaactgcagcttctggtgatttttggcttctgataaa 24551502  T
Q  192 cttgcttct 200  Q
    |||||||||    
T  24551503 cttgcttct 24551511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 3598375 - 3598256
Alignment:
Q  85 tcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttc 184  Q
    |||||||||||||| ||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||| | ||  |||||||||||| |||||||    
T  3598375 tcttctgcaatctttagacgagtttgaatctgttaaacaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttc 3598276  T
Q  185 tgatgaacttgcttctgatg 204  Q
    |||||||||||||| |||||    
T  3598275 tgatgaacttgcttatgatg 3598256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 1745190 - 1745392
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaag 101  Q
    |||||||| |||||||||||||| || |||||||| ||||||||||||||| || |||| |||||||||  | ||| ||  ||||||||| ||| |  ||    
T  1745190 ttcgtacagacgtactatgtcaacgcactttgaagtattagcatccaatgcatttcaaactagccgttgccacactcttctagtcttctgtaatttctag 1745289  T
Q  102 atgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
      ||||  || ||||| ||||||||||||||   || |||| |||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||||    
T  1745290 gcgagtaagagtccttgaaacaacttttgaaaacttgagttccatctcttgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttctg 1745389  T
Q  202 atg 204  Q
    |||    
T  1745390 atg 1745392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 33560346 - 33560157
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||| || |||| |||||||||  | ||| || |||||||||| ||| |  |    
T  33560346 cttcgtacaaacgtattatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaatttcta 33560247  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    |  ||||| || ||||| ||||||||||||||   || |||| |||||| ||||||| ||||| |||||||||| || ||||||||||||    
T  33560246 ggcgagttagagtccttgaaacaacttttgaaaacttgagttccatctcttgatgaactgcagcttctggtgatacatagcttctgatga 33560157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 23185348 - 23185136
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||| ||||||||||||||||         |||| ||| |||||    |||||| ||||||||||    
T  23185348 cttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctg 23185249  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||  | ||| ||| || ||||| || |||||| |||||| ||||| |||||||||||||||||| ||||| |||||||||||  ||||||||||||||    
T  23185248 caatgcttagacgagattaaatccattgaacaacctttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaa 23185149  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  23185148 cttgcttctgatg 23185136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 9320681 - 9320811
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcct-ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |||||| ||||||||||||||||| ||| ||| ||||||||  ||||||| |||||||| | ||||||||||||  |||||||| ||||| |||||||||    
T  9320681 acttttccagtcttctgcaatctttagacgaggttgaatccaattaaacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtga 9320780  T
Q  174 ttcacagcttctgatgaacttgcttctgatg 204  Q
    ||   |||||||||| |||||||||||||||    
T  9320781 tttttagcttctgataaacttgcttctgatg 9320811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 21932972 - 21933125
Alignment:
Q  52 ccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctc 149  Q
    |||| |||||||||||||||   ||| |||||||||| ||||||  | ||| ||| || ||||| || |||||| |||||| ||||||||  ||||||||    
T  21932972 cctttcaaaatagccgttgtttcactctttcagtcttatgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctc 21933071  T
Q  150 ctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    ||||||||||  || |||||||||||  ||||||||||||||||||||||||||    
T  21933072 ctgatgaaatagagcttctggtgattttcagcttctgatgaacttgcttctgat 21933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 45538478 - 45538349
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| ||||||||||||||||| ||| ||| |||||||| |||||||||||||||| | |||||||||||| | ||||||| ||||| ||||||||||    
T  45538478 acttttccagtcttctgcaatctttagacgaggttgaatccattaaacaacttttgaagccttaagttgcatcccatgatgaactgcagcttctggtgat 45538379  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |    |||| |||| |||| ||||||||||    
T  45538378 ttttggcttatgataaactcgcttctgatg 45538349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 1237749 - 1237878
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| | ||||||||||||||| ||| ||| |||||||| ||||||| |||||||| | |||||||||||| | ||||||| ||||| ||||||| ||    
T  1237749 acttttccggtcttctgcaatctttagacgaggttgaatccattaaacagcttttgaagccttaagttgcatcccatgatgaattgcagcttctggtaat 1237848  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |    ||||||||| |||||||||||||||    
T  1237849 ttttggcttctgataaacttgcttctgatg 1237878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 24833093 - 24832966
Alignment:
Q  78 ttttcagtcttctgcaatcttaagatgagtttgaatcct-ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattc 176  Q
    ||||||||||||||||||| | ||| ||| ||||||||  ||||||| |||||||| | ||||||||||||  |||||||| ||||| |||||||||||     
T  24833093 ttttcagtcttctgcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtgattt 24832994  T
Q  177 acagcttctgatgaacttgcttctgatg 204  Q
      ||||||| || |||||||||||||||    
T  24832993 ttagcttctaataaacttgcttctgatg 24832966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 30421467 - 30421352
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| ||||||||||||||  | ||| ||| || ||||| || |||| | |||||| ||||| ||||||||| |||||||| ||||| ||||||||||    
T  30421467 acttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgttgcatcttctgatgaactgcagcttctggtgat 30421368  T
Q  175 tcacagcttctgatga 190  Q
    |   ||||||||||||    
T  30421367 tttgagcttctgatga 30421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 204
Target Start/End: Original strand, 43774053 - 43774109
Alignment:
Q  148 tcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||||| | ||| |||||||||| || ||||||||||||||||||||||||||    
T  43774053 tcctgatgaactacagcttctggtgatacatagcttctgatgaacttgcttctgatg 43774109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 191
Target Start/End: Original strand, 21541090 - 21541175
Alignment:
Q  108 ttgaatcctttaaacaact-tttgaatct-ttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| |||||||||| ||| || || ||| |||||||||||||||||| |  |||||||||||||  |||||||||||||||    
T  21541090 ttgaatccattaaacaactatttaaaactcttaggttgcatctcctgatgaactatagtttctggtgatatacagcttctgatgaa 21541175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16189013 - 16189068
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||||  ||||| |||||| |||||| ||||||| ||||||||||||||||    
T  16189013 cttcgtacaattgtactttgtcaacgctcttagaagaataagcatccaatgccttc 16189068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16207335 - 16207390
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||    
T  16207335 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttc 16207390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 19156376 - 19156439
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||| ||||||| | ||  ||||||||||   |||||||||||||||||||||||||||    
T  19156376 ttgcatctcttgatgaactacaacttctggtgatcttcagcttctgatgaacttgcttctgatg 19156439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 28903586 - 28903685
Alignment:
Q  108 ttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga-ttcacagcttctgatgaa-cttgcttctgatg 204  Q
    ||||||||  ||||||||| |||||| ||||| ||||||||| |||||||| || || ||||||||| || | |||||||||||||  ||||||||||||    
T  28903586 ttgaatccaataaacaactatttgaaactttaggttgcatcttctgatgaattgtagcttctggtgattttatagcttctgatgaattttgcttctgatg 28903685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 39693654 - 39693764
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||||||||||  | ||| ||| |||||||| || |||||| |||||| |||||||  ||||||||||||||||  | ||  ||||||||||   ||    
T  39693654 cagtcttctgcaatgcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgagctacaacttctggtgatcttca 39693753  T
Q  180 gcttctgatga 190  Q
    |||||||||||    
T  39693754 gcttctgatga 39693764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18121231 - 18121177
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt 55  Q
    ||||||||||  ||||| ||| ||||||||||||||||  |||||||||||||||    
T  18121231 cttcgtacaattgtactttgttaatgctctttgaagaacaagcatccaatgcctt 18121177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 12757798 - 12757671
Alignment:
Q  79 tttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgattc 176  Q
    |||||||||||||||||  | ||| ||| || ||||| || |||| | ||| ||  ||||||  ||||||||||||||||| |  || | ||||||||      
T  12757798 tttcagtcttctgcaatgcttagacgagattaaatccattgaacatcctttaaagttttaagtcttgcatctcctgatgaactagagctactggtgatct 12757699  T
Q  177 acagcttctgatgaacttgcttctgatg 204  Q
     ||||||||||| |||||||||||||||    
T  12757698 tcagcttctgatcaacttgcttctgatg 12757671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 21540984 - 21541028
Alignment:
Q  12 cgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    |||||| |||||| ||||||||||| || ||||||||||||||||    
T  21540984 cgtactttgtcaacgctctttgaaggataagcatccaatgccttc 21541028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 23271123 - 23271044
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac--ttgcttctgatg 204  Q
    |||||| ||| | |||| |||| ||||| || || || ||||||||||||| ||||||||||||||  ||||||||||||    
T  23271123 tttgaaacttcaggttgaatcttctgatcaactgtagcttctggtgattcatagcttctgatgaacttttgcttctgatg 23271044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 33082979 - 33083070
Alignment:
Q  85 tcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||||||||  | ||| ||| || ||||| || |||||| |||||| ||||||||  |||||||||||||||| | ||| ||||||||||    
T  33082979 tcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 33083070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 3e-78; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 46796490 - 46796288
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| || ||| |||||||| |||| ||||||||||||||||||| ||||||||||||||||||     
T  46796490 cttcgtacaaacgtactatgtcaacgctctttgaagaataagtatctaatgcctttcaaattagccgttgtaatacttttccagtcttctgcaatctta- 46796392  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  46796391 gacgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttcttgtgattcacagcttctgatgaacttgcttct 46796292  T
Q  201 gatg 204  Q
    ||||    
T  46796291 gatg 46796288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 49666528 - 49666326
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattag-catccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatctta 99  Q
    ||||||||||||||| |||||||||||||||||||||||  | | | |||| |||| |||||||| |||||| |||||||| ||||||||||||||||||    
T  49666528 cttcgtacaaacgtaatatgtcaatgctctttgaagaatatgtctttcaat-cctttcaaaatagtcgttgttatacttttccagtcttctgcaatctta 49666430  T
Q  100 agatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
     || |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||||||| |||||||    
T  49666429 -gacgagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacaacttatgatgaaattgcttc 49666331  T
Q  200 tgatg 204  Q
    |||||    
T  49666330 tgatg 49666326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21605777 - 21605574
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||| || |||||||| |||||| |||||||| |||||||||||||| |  |    
T  21605777 cttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgtcatacttttccagtcttctgcaatttcta 21605678  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| |||||||||||||| ||||||||| |||||||||||||| ||||  |||||||||| |||| |||||||||||||||||| |    
T  21605677 ggcgagttagagtccttgaaacaacttttgaagctttaagttccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttat 21605578  T
Q  201 gatg 204  Q
    ||||    
T  21605577 gatg 21605574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21636793 - 21636590
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||| |||||  |||||||| |||||||||||||| |  |    
T  21636793 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtcttctgcaatttcta 21636694  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| ||||| |||||||| ||||||||| || ||||||||||| |||   |||||||||| |||||||||||||||||||||||||    
T  21636693 ggcgagttagagtccttgaaacagcttttgaagctttaagttccaactcctgatgaactgccacttctggtgatacacagcttctgatgaacttgcttct 21636594  T
Q  201 gatg 204  Q
    ||||    
T  21636593 gatg 21636590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 40851004 - 40851207
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||| || |||||||| |||||  |||||||| |||||||||||||| |  |    
T  40851004 cttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccatacttttccagtcttctgcaatttcta 40851103  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| || || |||||||| ||||||||| |||||||||||||| || || |||||||||| |||| ||||||||||||||||||||    
T  40851104 ggcgagttagagtccttgaaccagcttttgaagctttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctgatgaacttgcttct 40851203  T
Q  201 gatg 204  Q
    ||||    
T  40851204 gatg 40851207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 21640903 - 21641108
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||| |||||||||||||||| |||||||||| ||| ||||||||||||         ||||||||||||||||||  |||||||| |||||||||     
T  21640903 cttcgtaaaaacgtactatgtcaacgctctttgaaaaataagcatccaatgcttttcaatccttccaaaatagccgttgctatacttttccagtcttcta 21641002  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| |  |||||||||||||| ||||| |||||||  |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  21641003 caatcttaggc-gagtttgaatccttgaaacagcttttgaggctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaa 21641101  T
Q  192 cttgctt 198  Q
    |||||||    
T  21641102 cttgctt 21641108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 30054339 - 30054137
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctcttt-gaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||||||||||| ||||||| |  |||| |||| |||||||||| |||| ||| |||||  ||||||||  ||||||||||||| |||     
T  30054339 ttcgtacaaacgtactatgtcaacgctcttttgttgaataagcacccaatgcctttcaaagtagtcgttgctatacttttcaagtcttctgcaattttag 30054240  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||| ||| ||||| |||||||| |||| | ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  30054239 gc-gagtttgaattcttgaaacagcttttgaagctttgaattgcatctcctgatgaactgaagtttctggtgattcacagcttctgatgaacttgcttct 30054141  T
Q  201 gatg 204  Q
    ||||    
T  30054140 gatg 30054137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 14955463 - 14955675
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||         ||||||||  ||||   ||| ||| ||||||||||    
T  14955463 cttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatactttcaaaatagttgttgctttacctttccagtcttctg 14955562  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| ||||||| |||||||| |||| |||| |||||||||||||| ||||  |||||||||||| ||||||||||| ||    
T  14955563 caatctttagacgagtttgaatccattaaacagcttttgaagctttgagttacatctcctgatgaactgcaacttctggtgattctcagcttctgataaa 14955662  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  14955663 cttgcttctgatg 14955675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 1728138 - 1727936
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||| |||||||||||| || |||| |||| |||||||||||| || ||||||||||||||| | |||||   |||||| |||||| ||      
T  1728138 cttcgtacaaacgcactatgtcaatgttccttgaggaataagcatccaatgcttttcaaaatagccgttgtta-actttccaagtcttttgcaattttct 1728040  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||| |||||||||| |||||||||||||| || ||||||  ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |    
T  1728039 ggcgagattgaatccttgaaacaacttttgaaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgctttt 1727940  T
Q  201 gatg 204  Q
    ||||    
T  1727939 gatg 1727936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 24775657 - 24775443
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||         ||||||||  ||||    |||||| ||||||||||    
T  24775657 cttcgtacaaacgtactttgtcaaagctctttgaagaataagcattcaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctg 24775558  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaat--gcagtttctggtgattcacagcttctgatg 189  Q
    ||||||| ||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |  |||| |||||||||||| |||||| ||||     
T  24775557 caatctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatgaactgcgcagcttctggtgattctcagcttgtgata 24775458  T
Q  190 aacttgcttctgatg 204  Q
    |||||| ||||||||    
T  24775457 aacttggttctgatg 24775443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 2785184 - 2785313
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| ||||||||||||||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||  ||||||||||    
T  2785184 acttttccagtcttctgcaatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgat 2785283  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    || |||||||| || |||||||||||||||    
T  2785284 tctcagcttctaataaacttgcttctgatg 2785313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 20627554 - 20627356
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||  ||  ||||||||||||||||         ||||||||  ||||    |||||| ||||||||||    
T  20627554 cttcgtacaaacgtactttgtcaacgctctttgataaacaagcatccaatgccttcaaatccattcaaaatagttgttgcttcacttttccagtcttctg 20627455  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||||| | ||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||||  |||||||||||  |||||||||||||    
T  20627454 caatcattagacgagtttgaatccattaaacatcttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattttcagcttctgatga 20627356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 5213672 - 5213777
Alignment:
Q  52 ccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcct 151  Q
    |||||||||||||  ||||  |||||||| ||||||||||||||||| | | |||||||||||| ||||||| |||||||| ||||||||||||||||||    
T  5213672 ccttccaaaatagttgttgctatacttttccagtcttctgcaatctttatacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcct 5213771  T
Q  152 gatgaa 157  Q
    ||||||    
T  5213772 gatgaa 5213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 11223599 - 11223811
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||| |||| |||||| |||||||||||||  ||||||||||||||||         |||||||| |||||    |||||||||||||||||    
T  11223599 cttcgtacaaacatactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcactttttcagtcttctg 11223698  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||    ||| ||| ||||| || || |||| |||||||| ||  |||||| ||||||||||||| ||| | |||||||||||  ||| ||||||||||    
T  11223699 caatgcatagacgagattgaacccattgaacagcttttgaagctcaaagttgtatctcctgatgaactgctgcttctggtgattttcagattctgatgaa 11223798  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  11223799 cttgcttctgatg 11223811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 9700159 - 9699989
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||| |||||||||| |||| |||| |||| |||||||||||| || |||||||| |||||| | |||||   ||||||||||||| ||      
T  9700159 cttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtta-actttccaagtcttctgcaattttct 9700061  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |  ||| |||||||||| |||||||||||||| ||||| |||| |||| |||||||  ||||| |||||||||    
T  9700060 ggcgagcttgaatccttgaaacaacttttgaagctttaggttg-atcttctgatgatctgcagcttctggtga 9699989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 47207742 - 47207942
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||         |||| |||||||||    |||||| ||||||||||    
T  47207742 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcatttcaaactagccgttgcttcacttttccagtcttctg 47207841  T
Q  92 caat-cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    |||| ||| ||| ||| || ||||| || |||||| ||||||  |||| |||||||||||||||||| ||||| |||||||||||  |||||||||||||    
T  47207842 caatgctttagacgagattaaatccattgaacaacctttgaagttttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 47207941  T
Q  191 a 191  Q
    |    
T  47207942 a 47207942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 53056850 - 53056638
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| ||| || |||||||||||||  ||||||||||||||||         |||||||| |||||    |||||| ||||||||||    
T  53056850 cttcgtacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 53056751  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| ||  |||||||| ||||||| |||||||| | |||||||||||| | ||||||| ||||| |||| ||||||    ||||||||| ||    
T  53056750 caatctttagacgatgttgaatccattaaacagcttttgaaaccttaagttgcatcccatgatgaactgcagcttctagtgatttttggcttctgataaa 53056651  T
Q  192 cttgcttctgatg 204  Q
    |||| || |||||    
T  53056650 cttgtttttgatg 53056638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 82 - 204
Target Start/End: Original strand, 2561314 - 2561438
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||||||||||  | ||| ||| || ||||| || |||||| |||||| ||||||||  |||||||||||||||| |  || |||||||||||| ||    
T  2561314 cagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgattctca 2561413  T
Q  180 gcttctgatgaacttgcttctgatg 204  Q
    |||||||||||||||||||||||||    
T  2561414 gcttctgatgaacttgcttctgatg 2561438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 11869187 - 11869316
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| |||||||||| | |  | ||| ||| |||||| | |||||||| ||||||| | |||||||||||| ||||||||| ||||| ||||||||||    
T  11869187 acttttccagtcttctgtatttcttagacgagattgaattcattaaacaaattttgaagccttaagttgcatcccctgatgaactgcagcttctggtgat 11869286  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |  |||||||||||||| ||||||||||||    
T  11869287 tttcagcttctgatgaaattgcttctgatg 11869316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 29855445 - 29855658
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttc-agtcttct 90  Q
    ||||||||||||||||| |||||| ||| |||||||||  ||||||||||||||||         |||| |||||||||    |||||||  ||||||||    
T  29855445 cttcgtacaaacgtactctgtcaacgctttttgaagaacaagcatccaatgccttcaaattctttcaaactagccgttgcttcactttttttagtcttct 29855544  T
Q  91 gcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    |||||||| ||| ||| |||||||| ||||||| ||||||||   |||||||||||| | ||||||| ||||| || ||||||||    ||||| ||| |    
T  29855545 gcaatctttagacgaggttgaatccattaaacagcttttgaagtcttaagttgcatcccatgatgaactgcaggttttggtgatttttggcttccgataa 29855644  T
Q  191 acttgcttctgatg 204  Q
    ||||||||||||||    
T  29855645 acttgcttctgatg 29855658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 46349967 - 46349755
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||| |||||| |||||||| ||| |||||||  ||||||||||||||||         |||| ||| |||||    |||||| ||||||||||    
T  46349967 cttcgtacaatcgtactttgtcaatgttctctgaagaacaagcatccaatgccttcaaatcctttcaaattagtcgttgcttcacttttccagtcttctg 46349868  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||  | ||| ||| ||| |||  || |||||||||||||   ||||||||| |||||||||||| ||||  |||||||||||  |||||||| |||||    
T  46349867 caatgcttagacgagattggatcaattgaacaacttttgaagtcttaagttgcttctcctgatgaactgcaacttctggtgattttcagcttctaatgaa 46349768  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  46349767 cttgcttctgatg 46349755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 15833539 - 15833637
Alignment:
Q  108 ttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac-ttgcttctgatg 204  Q
    ||||||||  ||||||||| |||||| ||||| ||||||||| |||||||| || || |||||||||| ||||||||||||||||| ||||||||||||    
T  15833539 ttgaatccaataaacaactatttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatg 15833637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 22140800 - 22140965
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||| |||||||||||||| |||||||||||||  |||||||||||  |||         |||||||| |||||    |||| |  |||||||||    
T  22140800 cttcgtacatacgtactatgtcaacgctctttgaagaacaagcatccaatgttttcaaaacccttcaaaatagtcgttggttcacttatctagtcttctg 22140899  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaa 157  Q
    ||||| | ||  |||||||||||| || |||| |||||||| ||||||||||||||||||||||||    
T  22140900 caatccttaggcgagtttgaatccgttgaacagcttttgaaactttaagttgcatctcctgatgaa 22140965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 95 - 202
Target Start/End: Complemental strand, 12752647 - 12752539
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    |||| ||| |||||||||||| |||||||||| |||||| ||||| ||||||||| |||||||| | |||||||||||| |  ||||||||||||  |||    
T  12752647 tctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcatcttctgatgaattacagtttctggtgttatacagcttctgatagact 12752548  T
Q  194 tgcttctga 202  Q
    |||| ||||    
T  12752547 tgctactga 12752539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 77 - 190
Target Start/End: Complemental strand, 47405459 - 47405346
Alignment:
Q  77 tttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattc 176  Q
    |||| ||||||||||||||  | ||| ||| || ||||| || |||| | |||||| ||||| |||||||||| ||||||| ||||| |||||||||||     
T  47405459 ttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgttgcatctcgtgatgaactgcagcttctggtgattt 47405360  T
Q  177 acagcttctgatga 190  Q
     |||||||||||||    
T  47405359 tcagcttctgatga 47405346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 51341142 - 51341251
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaacttt-tgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    |||| ||| ||| |||||||| |||||||||| | |||| ||||| ||||||||| |||||||| | |||||||| |||||  ||||||||||||||| |    
T  51341142 tctttagacgaggttgaatccattaaacaactatatgaaactttaggttgcatcttctgatgaactacagtttctagtgatatacagcttctgatgaaat 51341241  T
Q  194 tgcttctgat 203  Q
     |||||||||    
T  51341242 agcttctgat 51341251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 10529499 - 10529577
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac-ttgcttctgatg 204  Q
    |||||| ||||| ||||||||| |||||||  || || |||||||||| ||||||||||||||||| ||||||||||||    
T  10529499 tttgaaactttaggttgcatcttctgatgagctgtagcttctggtgatacacagcttctgatgaactttgcttctgatg 10529577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 40799994 - 40800108
Alignment:
Q  76 ctttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgatt 175  Q
    ||||| ||||||||||||||  | ||| ||| || ||||| || |||| | |||||| ||||| | |||||||| ||||||| ||||| |||||||||||    
T  40799994 cttttccagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgatgcatctcttgatgaactgcagcttctggtgatt 40800093  T
Q  176 cacagcttctgatga 190  Q
      |||||||||||||    
T  40800094 ttcagcttctgatga 40800108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 28582277 - 28582356
Alignment:
Q  127 tttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||| ||||||||  ||||||||||||||||||  || |||||||||||  |||||||| ||| ||||||||||||||    
T  28582277 tttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttcagcttctaatgtacttgcttctgatg 28582356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 45858872 - 45858817
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||| ||||||| |||||| ||||||||||| || ||||||||||||||||    
T  45858872 cttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttc 45858817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 33583265 - 33583479
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctcttt-gaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttct 90  Q
    ||||||||||||||||| |||||| ||||||| || |||  |||||||||||| |||         ||||||||||||||    |||||| |||||||||    
T  33583265 cttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagccgttgcttcacttttccagtcttct 33583364  T
Q  91 gcaatcttaagatgagtttgaatcctttaaa-caacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
     ||||| | |||  || ||||||||  |||| ||||||||||| | ||||||||||||  |||||||| | ||  || ||||||||   ||||||||||     
T  33583365 acaatccttagacaaggttgaatcccataaaacaacttttgaagccttaagttgcatcctctgatgaactacaacttttggtgatttttagcttctgata 33583464  T
Q  190 aacttgcttctgatg 204  Q
     ||||||||||||||    
T  33583465 gacttgcttctgatg 33583479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 188
Target Start/End: Complemental strand, 45858768 - 45858674
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgat 188  Q
    |||||||  |||||| ||||| ||||||| || |||||| ||||| ||||||||| |||||||| | ||||||||||||||  || |||||||||    
T  45858768 tcttaaggcgagtttaaatccattaaacagctatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatactgcttctgat 45858674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 11909043 - 11908946
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||| ||| |||||||||||| |||||||||| |||||| ||||| ||||||||| |||||||| |  ||||| |||||||  ||| ||| |||||||    
T  11909043 tctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcatcttctgatgaactatagtttatggtgatatacaacttatgatgaa 11908946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11909147 - 11909092
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||| | ||||||| |||||| ||||||||||| || ||||||||||||||||    
T  11909147 cttcgtaaagacgtactttgtcaacgctctttgaaggataagcatccaatgccttc 11909092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 14969363 - 14969577
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||| ||| ||||| |||||| ||| |||||||||| ||||||||||||| ||         ||||||||  ||||   |||| || ||||||||||    
T  14969363 cttcgtaaaaatgtactttgtcaacgctatttgaagaataagcatccaatgccatcaaatcctttcaaaatagttgttgctttactcttccagtcttctg 14969462  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    ||||  | ||| ||| || ||||| || |||||| |||||| |||||||  |||||| |||| ||||| |  || ||||||||||   |||| |||||||    
T  14969463 caatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatatcctcatgaactagagcttctggtgatcttcagcatctgatg 14969562  T
Q  190 aacttgcttctgatg 204  Q
    ||||||||| |||||    
T  14969563 aacttgcttatgatg 14969577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 204
Target Start/End: Complemental strand, 18121655 - 18121531
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||||||||||  | | | ||| |||||||| || |||||| |||||| |||||| |  |||||||||||||||| |  || ||||||||||    |    
T  18121655 cagtcttctgcaatgctcaaacgagattgaatccattgaacaacctttgaagctttaaatcttgcatctcctgatgaactagagcttctggtgatcttta 18121556  T
Q  180 gcttctgatgaacttgcttctgatg 204  Q
    |||| |||||||||||||| |||||    
T  18121555 gcttatgatgaacttgcttttgatg 18121531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 204
Target Start/End: Original strand, 33598014 - 33598099
Alignment:
Q  119 aaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||||||||| | ||||||||||||  |||||||| | ||  || ||||||||   ||||||||||  ||||||||||||||    
T  33598014 aaacaacttttgaagccttaagttgcatcctctgatgaactacaacttttggtgatttttagcttctgatagacttgcttctgatg 33598099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 50300373 - 50300450
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||| | ||||||||||||  |||||||| ||||| |||||||||||   | ||| |||| |||||||||||||||    
T  50300373 tttgaagccttaagttgcatcctctgatgaactgcagcttctggtgatttttaacttatgataaacttgcttctgatg 50300450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 2785100 - 2785152
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctc-tttgaagaattagcatccaatgc 52  Q
    |||||||||||||||||||||||| |||| ||||| |||  ||||||||||||    
T  2785100 cttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgc 2785152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 49990416 - 49990484
Alignment:
Q  135 tttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    |||| |||| |||| |||||||  | ||||||||||||||  ||||||||||||||| | |||||||||    
T  49990416 tttaggttgtatcttctgatgatctacagtttctggtgatatacagcttctgatgaaatagcttctgat 49990484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 51341050 - 51341094
Alignment:
Q  12 cgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    |||||| |||||| ||||||||||| || ||||||||||||||||    
T  51341050 cgtactttgtcaacgctctttgaaggataagcatccaatgccttc 51341094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 4e-77; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 10251022 - 10251218
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||     
T  10251022 cttcgtacaaacgtactatgtcaaaactctttgaagaataagcatccaatgccttccaaattagccgttgttatacttttccagtcttctgcaatctta- 10251120  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgctt 198  Q
    || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||    
T  10251121 gacgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcatagcttctgatgaacttgctt 10251218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 46089025 - 46089228
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||  |||||||| |||||||||||||| || |    
T  46089025 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatacttttccagtcttctgcaattttta 46089124  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| ||||| |||||||| |||||||||||||||| ||||||| ||||| |||||||||| |||| ||| ||||||||||||||||    
T  46089125 ggcgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcatgatgaactgcagcttctggtgatacacaacttatgatgaacttgcttct 46089224  T
Q  201 gatg 204  Q
    ||||    
T  46089225 gatg 46089228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21702850 - 21703061
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcc---------ttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||         || ||||||||||||||  ||||||||  |||||||||    
T  21702850 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcattcaatgcccttcaatcctttcaaaatagccgttgctatacttttcaagtcttctg 21702949  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| || |||||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |    
T  21702950 caatctta-gacgagtttgaatccttgaaacaaattttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgta 21703048  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  21703049 cttgcttctgatg 21703061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 48570275 - 48570064
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||         ||||||||| |||||| ||||||||  |||||||||    
T  48570275 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttttaatccttccaaaatagtcgttgttatacttttctagtcttctg 48570176  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| || |||||||||||| ||||||| |||||||| |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||| ||    
T  48570175 caatctta-gacgagtttgaatccgttaaacagcttttgaaactttaagttgcatctcctgatgaattacagcttctggtgattctcagcttctgataaa 48570077  T
Q  192 cttgcttctgatg 204  Q
     |||||| |||||    
T  48570076 attgcttatgatg 48570064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 21204967 - 21204765
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||||||  |||||||| |||||||||||||| |  |    
T  21204967 cttcgtacaaacgtactatgtcaacgctctttgaagaattaacatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttcta 21204868  T
Q  101 gatgagtttgaatcctttaaacaactttt-gaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
    |  ||||| || ||||| |||||||||||  || ||||||||| |||||| ||||||| ||||| |||||||||| |||| |||||||||||||||||||    
T  21204867 ggcgagttagagtccttgaaacaacttttaaaaactttaagttccatctcttgatgaactgcagcttctggtgatacacaacttctgatgaacttgcttc 21204768  T
Q  200 tga 202  Q
    |||    
T  21204767 tga 21204765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 44821589 - 44821377
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||||||||||  ||||||||||||| ||||| ||| ||||||         |||||||| |||||  ||||||||||||||||||     
T  44821589 cttcgtacaaacgtactatgtcaacactctttgaagaataagcatacaaagccttcaaatccttccaaaatagtcgttgctatactttttcagtcttcta 44821490  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||| | | ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| || ||||||||| ||||||||||| ||    
T  44821489 caaaccttagacgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcctgatgaactacagcttatggtgattctcagcttctgataaa 44821390  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  44821389 cttgcttctgatg 44821377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21984632 - 21984835
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||||||||| |||   |||||||| |||| ||||||||| |  |    
T  21984632 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagctgtttccatacttttccagtgttctgcaatatcta 21984731  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| |||||||||||||  ||||||||| | |||||||||||| || || |||||||||| |||||||||||||||||||||||||    
T  21984732 ggcgagttagagtccttgaaacaacttttgacactttaagttccctctcctgatgaactgtagcttctggtgatacacagcttctgatgaacttgcttct 21984831  T
Q  201 gatg 204  Q
    ||||    
T  21984832 gatg 21984835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 204
Target Start/End: Complemental strand, 21121106 - 21120904
Alignment:
Q  3 tcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaaga 102  Q
    |||||||||||||||||||||| |||||||||||||| |||||||||||| || || ||||| |||||  ||| |||| ||||||||||| || |  ||     
T  21121106 tcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcagaatagtcgttgccatatttttccagtcttctgcgatttctagg 21121007  T
Q  103 tgagtttgaatcctttaaacaacttttg-aatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
    |||||| || ||||| ||||| |||||| || ||||||||| |||||||||||||| ||||| |||||||||| |||||||||||||||| |||||||||    
T  21121006 tgagttagagtccttgaaacagcttttgaaaactttaagttccatctcctgatgaactgcagcttctggtgatacacagcttctgatgaatttgcttctg 21120907  T
Q  202 atg 204  Q
    |||    
T  21120906 atg 21120904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 21135204 - 21135000
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||| || || |||||| ||||  ||| |||| |||||||||| ||| |  |    
T  21135204 cttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcatttcagaatagctgttgccatatttttccagtcttctgtaatttcta 21135105  T
Q  101 gatgagtttgaatcctttaaacaacttttg-aatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
    | |||||| || ||||| |||||||||||| || ||||||||| |||||||||||||| ||||  |||||||||| |||| |||||||||||||||||||    
T  21135104 ggtgagttagattccttgaaacaacttttgaaaactttaagttccatctcctgatgaactgcaacttctggtgatacacaacttctgatgaacttgcttc 21135005  T
Q  200 tgatg 204  Q
    |||||    
T  21135004 tgatg 21135000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 42284664 - 42284866
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||| || |||||||| ||| |  | | |||| ||||||||||||||||| |    
T  42284664 cttcgtacaaacgtactatgtcaacgctctttgaagaaaaagcatccaatgcatttcaaaatagtcgt-gccacaattttccagtcttctgcaatcttta 42284762  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| ||||| ||||||||  ||||||||  |||| |||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  42284763 ggcgagttagagtccttgaaacagcttttgaaaatttaagttcaatcttctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttct 42284862  T
Q  201 gatg 204  Q
    ||||    
T  42284863 gatg 42284866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 25448610 - 25448396
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||         |||||||| || ||    |||||| ||||||||||    
T  25448610 cttcgtacaaacgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgctgcttcacttttccagtcttctg 25448511  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaat--gcagtttctggtgattcacagcttctgatg 189  Q
    ||||||| ||| |||||||||||| ||||||| |||||||| ||||||||||||||| |||||||| |  |||| |||| ||||||| |||||||||||     
T  25448510 caatctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatcttctgatgaactgcgcagcttctagtgattctcagcttctgata 25448411  T
Q  190 aacttgcttctgatg 204  Q
    ||||||||| |||||    
T  25448410 aacttgcttttgatg 25448396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 2327400 - 2327271
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||||||||| ||||||||||| ||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  2327400 actttttcagtcatctgcaatctttagacgagtttgaatctattaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgat 2327301  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |    ||||||||| |||||||||||||||    
T  2327300 ttttggcttctgataaacttgcttctgatg 2327271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 30572233 - 30572430
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||| ||||||||||||| ||||||  |||||| | ||||||||||         ||| ||||||||||||||  |||||||| ||||||||||    
T  30572233 cttcgtacaatcgtactatgtcaacgctcttctaagaataaacatccaatgcttttcaatcctttcaaaatagccgttgctatacttttccagtcttctg 30572332  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    |||||| | || |||||||||||||| ||||| || ||||| |||||||||| ||||||||||||| ||||  ||||||||||||||| ||||||||||    
T  30572333 caatctca-gacgagtttgaatccttgaaacagctattgaagctttaagttgtatctcctgatgaactgcaacttctggtgattcacaacttctgatga 30572430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 37642284 - 37642477
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |||| |||| ||||  | ||| || |||||||||| ||| |  |    
T  37642284 cttcgtataaacgtactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagctgttgccacactcttccagtcttctgtaatttcta 37642383  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaactt 194  Q
    |  ||||| || ||||| ||||| |||||||| |||| ||||  || |||||||||| ||||| ||||||||||  | ||||||||||||||||    
T  37642384 ggcgagttagagtccttgaaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtgatatatagcttctgatgaactt 37642477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 35040202 - 35040414
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||||||||   |||||||||||| |||         |||||||| |||||   |||||||  |||||||||    
T  35040202 cttcgtacaaacgtactttgtcaacgctctttgaagatcaagcatccaatgctttcaaatcctttcaaaatagtcgttgctttacttttctagtcttctg 35040301  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| ||| ||| |||| |||||||||||||||| | |||||||||||| | ||||||| ||||| |||||||||||    ||||||||| ||    
T  35040302 caatctttagacgaggttggatccattaaacaacttttgaagccttaagttgcatcccatgatgaattgcagcttctggtgatttttggcttctgataaa 35040401  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  35040402 cttgcttctgatg 35040414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 2834727 - 2834937
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgc 92  Q
    ||||||||| |||||| |||||| | |||||||||||  ||||||||||||||||         |||| |||||||||    |||||||||||||||  |    
T  2834727 ttcgtacaatcgtactttgtcaacgttctttgaagaacaagcatccaatgccttcaaatcctttcaaattagccgttgcttcactttttcagtcttcaac 2834826  T
Q  93 aatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac 192  Q
    |||  | ||| ||| |||||||| || ||||||||| ||| ||||||||||||||||| |||||| ||||| |||||||||||  |||||||| ||| ||    
T  2834827 aatgcttagacgagattgaatccattgaacaactttggaagctttaagttgcatctcccgatgaactgcagcttctggtgattttcagcttctaatg-ac 2834925  T
Q  193 ttgcttctgatg 204  Q
    ||||||||||||    
T  2834926 ttgcttctgatg 2834937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 7745046 - 7744935
Alignment:
Q  80 ttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||||| |||| |||| |||||||||||||||| |||||||||||||||| || || ||||||||| |||||||| ||||| ||||||||||  |      
T  7745046 ttcagtcttatgcactctttagatgagtttgaatccattaaacaacttttgaaactgtaggttgcatcttctgatgaactgcagcttctggtgatatatg 7744947  T
Q  180 gcttctgatgaa 191  Q
    ||||||||||||    
T  7744946 gcttctgatgaa 7744935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 39201036 - 39200824
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||| ||||         |||| |||||||||    ||| |||||||||||||    
T  39201036 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgtcttcaaatcctttcaaactagccgttgcttcactctttcagtcttctg 39200937  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||  | | ||||| || ||||| || |||| |||||||| ||||| |||||||||||| ||||| ||||| || ||||||||  |||||| |||||||    
T  39200936 caatgcttacatgagattaaatccattgaacagcttttgaagctttatgttgcatctcctaatgaactgcagcttttggtgattttcagcttttgatgaa 39200837  T
Q  192 cttgcttctgatg 204  Q
    ||||||| |||||    
T  39200836 cttgcttttgatg 39200824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 201
Target Start/End: Complemental strand, 22464770 - 22464643
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaac-ttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |||||| ||||||||||||||  | ||||||| || ||||| || |||||| ||||||| ||||| ||| |||||||||||||| || ||  ||||||||    
T  22464770 acttttccagtcttctgcaatgcttagatgagattaaatccgttgaacaaccttttgaagctttatgttacatctcctgatgaactgtagcatctggtga 22464671  T
Q  174 ttcacagcttctgatgaacttgcttctg 201  Q
    ||  |||||||| |||||||||||||||    
T  22464670 ttttcagcttcttatgaacttgcttctg 22464643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 190
Target Start/End: Original strand, 29215952 - 29216031
Alignment:
Q  111 aatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||| ||||  |||||||||||  |||||||||||||    
T  29215952 aatccattaaacaacctttgaagctttaagttgcatctcctgatgaattgcaacttctggtgattttcagcttctgatga 29216031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 127 - 201
Target Start/End: Complemental strand, 22427266 - 22427192
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
    |||||| ||||| |||||||||||||||||| || || |||||||||||  ||||||||||||||||||||||||    
T  22427266 tttgaagctttatgttgcatctcctgatgaactggagcttctggtgattttcagcttctgatgaacttgcttctg 22427192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 19215648 - 19215847
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||| |  |||||||||| |||| |||| |||| |||||| ||||| || ||||||||||||||| | |||||   ||||||||||||| ||      
T  19215648 cttcgtacaatcacactatgtcaacgctccttgaggaataagcatcaaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttct 19215746  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||| |||||||||| ||||| |||||||| |||||  ||| |||| |||||||  ||||| ||||||||| |    |||||||||||| ||||||||    
T  19215747 ggcgagcttgaatccttgaaacagcttttgaagctttagattg-atcttctgatgatctgcagcttctggtgaat--ttgcttctgatgaatttgcttct 19215843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 21544184 - 21544262
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac-ttgcttctgatg 204  Q
    |||||| ||||| ||||||||| |||||||| || || |||||||||| ||||||||||||||||| ||||||||||||    
T  21544184 tttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatg 21544262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23024824 - 23024893
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttg 70  Q
    ||||||||||||| |||||||||| |||| |||| |||| |||||||||||| || |||||||| |||||    
T  23024824 cttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttg 23024893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Complemental strand, 19170245 - 19170182
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||| |||||||| || || ||||||||||  | ||||||||||||||||||||||||||    
T  19170245 ttgcatcttctgatgaactgtagcttctggtgatataaagcttctgatgaacttgcttctgatg 19170182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 2267208 - 2267290
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaa 157  Q
    |||||| ||||||||||||||  | ||| ||| || ||||| || |||||| |||||| ||||| ||||||||||||||||||    
T  2267208 acttttccagtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttatgttgcatctcctgatgaa 2267290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 22600226 - 22600042
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||         |||||||| ||||||  |||| || ||||||||||    
T  22600226 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgttttactcttccagtcttctg 22600127  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    ||||  | |||  || || ||||| || |||| | |||||| |||||||  ||||||||||||||||| |  || ||||||||||    
T  22600126 caatgcttagacaagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgat 22600042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 17371177 - 17371274
Alignment:
Q  108 ttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||  ||||||||| |||||| ||| | |||||||||  ||||||| || || ||||||||||   |||||||||||  ||||||||||||||    
T  17371177 ttgaatccaataaacaactatttgaaacttcaggttgcatcttttgatgaactgtagcttctggtgatatgcagcttctgatagacttgcttctgatg 17371274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 20954425 - 20954317
Alignment:
Q  84 gtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    ||||||||||||  | ||| ||| || ||||| || |||||| |||||| ||||||||  |||||||||||||||| |  || ||||||||||   ||||    
T  20954425 gtcttctgcaatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttctggtgatcttcagc 20954326  T
Q  182 ttctgatga 190  Q
    |||||||||    
T  20954325 ttctgatga 20954317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 2327484 - 2327432
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctc-tttgaagaattagcatccaatgc 52  Q
    ||||||||||||||||| ||||||||||| ||||| |||  ||||||||||||    
T  2327484 cttcgtacaaacgtactttgtcaatgctcttttgaggaacaagcatccaatgc 2327432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 200
Target Start/End: Complemental strand, 32785898 - 32785772
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtg 172  Q
    |||||| ||||||||||||||  | ||| ||| || |||||  | |||||| |||||| |||||||  ||||||||| ||||||| | ||  |||| |||    
T  32785898 acttttccagtcttctgcaatgcttagacgagattaaatcc-atgaacaacctttgaagctttaagtcttgcatctcatgatgaactacaacttctagtg 32785800  T
Q  173 attcacagcttctgatgaacttgcttct 200  Q
    |||  |||||||| ||||||||||||||    
T  32785799 attttcagcttctaatgaacttgcttct 32785772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 7e-76; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 28464443 - 28464241
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||| |    
T  28464443 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagccgttgttatacttttttagtcttctgcaatctt-a 28464345  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    || |||||||||||||| ||||| |||||||| |||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||    
T  28464344 gacgagtttgaatccttgaaacagcttttgaagctttaagttgtatctcctgatgaactgcagcttctggtgattcacagcttctgataaacttgcttct 28464245  T
Q  201 gatg 204  Q
    ||||    
T  28464244 gatg 28464241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 9089002 - 9089190
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| | |    
T  9089002 cttcgtacaaacgtactatgtcaacgctctttgaagaattagcatccaatgccttccaaaatagtcgttgtaatacttttccagtcttcttcaatcat-a 9089100  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    || |||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  9089101 gacgagtttgattcctttaaacagcttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatga 9089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 2 - 186
Target Start/End: Complemental strand, 25930259 - 25930075
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaag 101  Q
    ||||||||||||||||||||||| |||||||||| ||| |||||||||||||||| ||| |||||||||| |||||||| ||||||| ||||||||| ||    
T  25930259 ttcgtacaaacgtactatgtcaacgctctttgaaaaataagcatccaatgccttctaaattagccgttgttatacttttccagtcttatgcaatctttag 25930160  T
Q  102 atgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctg 186  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  25930159 acgagtttgaatcctttaaacaacttttgaagctttaagttgcatctcctgatgaattgcagcttctggtgattcacagcttctg 25930075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 3245545 - 3245338
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaa---------aatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||| |||         |||||||||||  |||||||| ||||||||||    
T  3245545 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcctttcaattctttcaaaatagccgttgctatacttttccagtcttctg 3245446  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| || |||||||||||||| |||||  ||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  3245445 caatctta-gacgagtttgaatccttgaaacagttttggaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaa 3245347  T
Q  192 cttgcttct 200  Q
    |||||||||    
T  3245346 cttgcttct 3245338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 10848810 - 10849009
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatg 104  Q
    ||||||||||| |||||||| |||||||||||||| |||||| |||||||| ||||||||| | ||  |||||||| |||| ||||||||| || ||  |    
T  10848810 gtacaaacgtattatgtcaacgctctttgaagaataagcatctaatgcctttcaaaatagctgatgccatacttttccagttttctgcaatttttaggcg 10848909  T
Q  105 agtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||||||| |||||||||||||| |||||||||||||||| ||||||| ||||| |||||||||| |||||||| |||||||||||||| |||||    
T  10848910 agtttgaatccttgaaacaacttttgaagctttaagttgcatctcatgatgaactgcagcttctggtgatacacagcttatgatgaacttgcttttgatg 10849009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 15517002 - 15517214
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||| |||||||| |||  ||||||||||||| |||||||||||||||         |||||||||||||||  |||||||| ||||||||||    
T  15517002 cttcgtacaaaagtactatgccaacactctttgaagaataagcatccaatgccttcaaatccttccaaaatagccgttgctatacttttccagtcttctg 15517101  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| || ||||||||||||| ||||||||||||||| |||||||| | ||  |||||||||||| || |||||||| ||    
T  15517102 caatctttagacgagtttgaatccgttgaacaacttttgaagctttaagttgcatcttctgatgaactacaacttctggtgattctcaacttctgataaa 15517201  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  15517202 cttgcttctgatg 15517214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 26759182 - 26759394
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||| |||||| |||  |||||||||||||| |||||||||||||||         ||||||||| |||||| |||||||| ||||||||||    
T  26759182 cttcgtacaaacttactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgttatacttttccagtcttctg 26759281  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||  || ||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||  |||||||||||| ||||||||||| ||    
T  26759282 caatctttaggcgaatttgaatccgttaaacaacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaa 26759381  T
Q  192 cttgcttctgatg 204  Q
     ||||||||||||    
T  26759382 tttgcttctgatg 26759394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 35986331 - 35986133
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatg 104  Q
    ||||| |||||||||||||| ||||||||||||||  ||||||||||| || |||||||| |||||  | |||||| |||||||||||||| ||| |  |    
T  35986331 gtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagtcgttgccacacttttccagtcttctgcaattttaggc-g 35986233  T
Q  105 agtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||| || ||||| ||||| |||||||| |||||||||  ||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  35986232 agttagagtccttgaaacatcttttgaaactttaagttcaatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgatg 35986133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 4887055 - 4887267
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||| ||||||| |||||| |||||||||||||  ||||||||||||||||         |||||||| |||||  |||||||| ||||||| ||    
T  4887055 cttcgtacacacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcgttgctatacttttccagtcttttg 4887154  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||||||  ||||| ||||| || ||||||||||||| ||||||||||||| || ||||||| ||||| |||||||||||| |||||||| |||||    
T  4887155 caatcttaagacaagtttaaatccattgaacaacttttgaagctttaagttgcatatcttgatgaactgcagcttctggtgattctcagcttctaatgaa 4887254  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  4887255 cttgcttctgatg 4887267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 11993921 - 11994133
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||| ||||||| |||||| |||||||||||||  |||||||||||| |||         |||| |||||||||    ||| || ||||||||||    
T  11993921 cttcgtacatacgtactttgtcaacgctctttgaagaacaagcatccaatgctttcaaatcccttcaaattagccgttgcttcactattccagtcttctg 11994020  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||| | ||| |||||||||||| || |||| |||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||    
T  11994021 caatccttagacgagtttgaatccgttgaacatcttttgaaactttaagttgcatctcctgatgaactacagcttctggtgattcacagcttctgataaa 11994120  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  11994121 cttgcttctgatg 11994133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 29138510 - 29138300
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||         ||||||||  ||||  |||||||  ||||||||||    
T  29138510 cttcgtacaaacgtactatgacaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagttgttgctatactttc-cagtcttctg 29138412  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| || || ||||||||  ||||||| |||||||| |||||||||||||||||||||||| | ||  |||||||||||| ||||||||||| ||    
T  29138411 caatctta-gacgattttgaatctgttaaacagcttttgaaactttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaa 29138313  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  29138312 cttgcttctgatg 29138300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 35932110 - 35931906
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||| || |||||||| |||||  |||||||| |||||||||||||| |  |    
T  35932110 cttcgtacaaacgtactatgtcaacactctttgaagaataagcatccaatgcgtttcaaaatagtcgttgccatacttttccagtcttctgcaatttcta 35932011  T
Q  101 gatgagtttgaatcctttaaacaacttttg-aatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
    |  ||||| || ||||| |||||||||||| || ||||||||| || ||| ||||||| || |  |||||||||| |||| ||||||||||||| |||||    
T  35932010 ggcgagttagagtccttgaaacaacttttgaaaactttaagttccacctcttgatgaactgtaccttctggtgatacacaacttctgatgaactagcttc 35931911  T
Q  200 tgatg 204  Q
    |||||    
T  35931910 tgatg 35931906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 30743013 - 30743225
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||||||| | ||||||||||||||         |||||||  |||||   | | ||| ||||||||||    
T  30743013 cttcgtacaaacgtactttgtcaacgctctttgaagaataaacatccaatgccttcaaatcctttcaaaataatcgttgctttgcctttccagtcttctg 30743112  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||  |||| || |||| |||||| |||| ||    
T  30743113 caatctttagacgagtttgaatccattaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctcgtaattctcagcttatgataaa 30743212  T
Q  192 cttgcttctgatg 204  Q
     ||||||||||||    
T  30743213 tttgcttctgatg 30743225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 200
Target Start/End: Complemental strand, 30115853 - 30115772
Alignment:
Q  119 aaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  30115853 aaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttct 30115772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 42243797 - 42243926
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| |||||||||||||| || ||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||| | ||| ||||||||||    
T  42243797 acttttccagtcttctgcaatttttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatgaactacagcttctggtgat 42243896  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    || ||| || |||| || ||||||||||||    
T  42243897 tctcagtttttgataaatttgcttctgatg 42243926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 33022780 - 33022909
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| ||||||||||||||  | ||||||| || ||||| || |||| | |||||| ||||| |||||||||||||||||| ||||  ||||||||||    
T  33022780 acttttccagtcttctgcaatgcttagatgagattaaatccattgaacagcctttgaagctttatgttgcatctcctgatgaactgcaaattctggtgat 33022879  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |  |||||||||||||||||||||||||||    
T  33022880 tttcagcttctgatgaacttgcttctgatg 33022909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21660245 - 21660448
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||| ||||||||||| | ||||||| || | |||||||||||| ||  |||||||  ||||  |||||||| | ||||||||||||||| |    
T  21660245 cttcgtacaaacatactatgtcaacgatctttgaggactaagcatccaatgcatttgaaaatagttgttgccatacttttccggtcttctgcaatcttta 21660344  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    || ||||| || ||||| ||||| |||||||| |||| ||||  || |||  ||||| || || |||||||||| || | |||||||||| || ||||||    
T  21660345 gacgagttagagtccttgaaacagcttttgaaactttgagttcaatttccaaatgaactgtagcttctggtgatacataacttctgatgacctagcttct 21660444  T
Q  201 gatg 204  Q
    ||||    
T  21660445 gatg 21660448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 5429999 - 5430129
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaa-caacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |||||||||||||||||||||| | | | ||| ||||||||  |||| || |||||||| | |||||||||||||||||||||| ||||| |||||||||    
T  5429999 actttttcagtcttctgcaatccttaaacgaggttgaatcccataaaacagcttttgaagccttaagttgcatctcctgatgaactgcagcttctggtga 5430098  T
Q  174 ttcacagcttctgatgaacttgcttctgatg 204  Q
    ||   | ||||||||||||||||||||||||    
T  5430099 tttttaccttctgatgaacttgcttctgatg 5430129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 95 - 204
Target Start/End: Original strand, 32160902 - 32161012
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    |||| ||| |||||||||||| |||||||||| |||||| ||||| ||||||||| |||||||| | ||||||||||||||  ||||||||||||  |||    
T  32160902 tctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatacagcttctgatagact 32161001  T
Q  194 tgcttctgatg 204  Q
    |||||||||||    
T  32161002 tgcttctgatg 32161012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 14086643 - 14086429
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctcttt-gaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttct 90  Q
    ||||||||||||||||| |||||| ||||||| || |||  |||||||||||| |||         ||||||||||||||    |||||| |||||||||    
T  14086643 cttcgtacaaacgtactttgtcaacgctcttttgaggaacaagcatccaatgcattcaaatcacttcaaaatagccgttgcttcacttttccagtcttct 14086544  T
Q  91 gcaatcttaagatgagtttgaatcct-ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    |||||| | ||| ||| ||||||||  ||||||| |||||||| | ||||||||||||  |||||||| ||||| ||||||| |||   ||||| ||||     
T  14086543 gcaatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgcagcttctggtaatttttagcttttgata 14086444  T
Q  190 aacttgcttctgatg 204  Q
    |||||||||||||||    
T  14086443 aacttgcttctgatg 14086429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 204
Target Start/End: Original strand, 33933384 - 33933516
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcct-ttaaacaactttt--gaatctttaagttgcatctcctgatgaaatgcagtttctggt 171  Q
    |||||| ||||||| ||||||| | ||| ||| ||||||||  |||||||||||||  ||| ||||||||||||||  |||||||| ||||  || ||||    
T  33933384 acttttccagtcttttgcaatccttagacgaggttgaatcccattaaacaacttttttgaagctttaagttgcatcctctgatgaactgcaacttatggt 33933483  T
Q  172 gattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||| ||||||||||| |||||||||||||||    
T  33933484 gattctcagcttctgataaacttgcttctgatg 33933516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 25111886 - 25111777
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    |||| ||||||| ||||||||  ||||||||| |||||| |||||  |||||||| |||||||| | ||||||||||||||  ||||||||||||||| |    
T  25111886 tctttagatgaggttgaatccaataaacaactatttgaaactttagattgcatcttctgatgaactccagtttctggtgatatacagcttctgatgaaat 25111787  T
Q  194 tgcttctgat 203  Q
     |||||||||    
T  25111786 agcttctgat 25111777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 25170977 - 25170868
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    |||| ||||||| ||||||||  ||||||||| |||||| |||||  |||||||| |||||||| | ||||||||||||||  ||||||||||||||| |    
T  25170977 tctttagatgaggttgaatccaataaacaactatttgaaactttagattgcatcttctgatgaactccagtttctggtgatatacagcttctgatgaaat 25170878  T
Q  194 tgcttctgat 203  Q
     |||||||||    
T  25170877 agcttctgat 25170868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 169
Target Start/End: Original strand, 31117993 - 31118088
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaac-ttttgaatctttaagttgcatctcctgatgaaatgcagtttctg 169  Q
    |||||| ||||||||||||||  | ||| |||||| ||||| ||||||||| ||||||| ||||| |||||||||||||||||| ||||| |||||    
T  31117993 acttttccagtcttctgcaatgcttagacgagtttaaatccgttaaacaaccttttgaagctttatgttgcatctcctgatgaactgcagcttctg 31118088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 23391707 - 23391506
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc-cttccaaaatagccgttgtaatactttttcagtcttctgcaa-tctt 98  Q
    ||||||||||||| |||||||||| |||| |||| |||| ||||||||||||  || ||||||||||||||| | |||||   |||||||||||| | ||    
T  23391707 cttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttgtta-actttcaaagtcttctgcaattttt 23391609  T
Q  99 aagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcac-agcttctgatgaacttgct 197  Q
      |  ||| |||||||||| ||||| |||||||| ||||| |||| ||||  ||||||  ||||| |||||||||   ||  |||| |||||||||||||    
T  23391608 ctggcgagcttgaatccttgaaacagcttttgaagctttaggttg-atcttttgatgatctgcagcttctggtga---acttgcttatgatgaacttgct 23391513  T
Q  198 tctgatg 204  Q
    |||||||    
T  23391512 tctgatg 23391506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 26765531 - 26765670
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg---------ccttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||||| |||  |||||||||||||| |||||||||||         |||||||||||||  ||||  |||||||| ||||||||||    
T  26765531 cttcgtacaaacgtactatttcagcgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagttgttgctatacttttccagtcttctg 26765630  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaa 132  Q
    ||||||| ||  || ||||||| | ||||||| ||||||||    
T  26765631 caatctttaggcgaatttgaat-cgttaaacagcttttgaa 26765670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 30115940 - 30115889
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcc 53  Q
    ||||||||||||||||||||||| |||||||||||||| |||||| ||||||    
T  30115940 ttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcc 30115889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 23478535 - 23478596
Alignment:
Q  140 gttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
    ||||||||| |||||||| || || ||||||||||  |||||||||||||||||||||||||    
T  23478535 gttgcatcttctgatgaactgtagcttctggtgatatacagcttctgatgaacttgcttctg 23478596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 23412986 - 23412866
Alignment:
Q  84 gtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    ||||||||||||  |  |||||| || ||||| || |||||| |||||| ||||||||  |||||||||||||||| | ||| ||||||||||     ||    
T  23412986 gtcttctgcaatgcttggatgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat--cttgc 23412889  T
Q  182 ttctgatgaacttgcttctgatg 204  Q
    |||||||||||||||||||||||    
T  23412888 ttctgatgaacttgcttctgatg 23412866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 41566447 - 41566324
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacag 180  Q
    |||||||||||||  | ||| ||| || ||||| || || | |||||||| ||||||||  |||||||||||||||| | ||  ||||| ||||   |||    
T  41566447 agtcttctgcaatgcttagacgagattaaatccattgaatagcttttgaagctttaagtcttgcatctcctgatgaactacaacttctgatgatcttcag 41566348  T
Q  181 cttctgatgaacttgcttctgatg 204  Q
    ||||||||||||||||||||||||    
T  41566347 cttctgatgaacttgcttctgatg 41566324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 26784538 - 26784601
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||||||| |||| | ||| ||||||||||   |||||||||||||||||||||||||||    
T  26784538 ttgcatctcctgctgaactacagcttctggtgatcttcagcttctgatgaacttgcttctgatg 26784601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28139640 - 28139747
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg---------ccttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||| ||||||||||| ||||| |||||||| |||||||||||         |||| |||||||| |||||  ||||||||||||||||||     
T  28139640 cttcgtacaaacatactatgtcaacgctctatgaagaataagcatccaatgtctttcaatcctttcaaaatagtcgttgctatactttttcagtcttcta 28139739  T
Q  92 caatctta 99  Q
    || |||||    
T  28139740 cattctta 28139747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7745797 - 7745742
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||    
T  7745797 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttc 7745742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32160799 - 32160854
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||| |||| || |||||| ||||||||||| || ||||||||||||||||    
T  32160799 cttcgtacatacgttctttgtcaacgctctttgaaggataagcatccaatgccttc 32160854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 84 - 174
Target Start/End: Complemental strand, 89434 - 89342
Alignment:
Q  84 gtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    ||||||||||||  | ||| ||| || ||||| || ||||||||||||| |||||||  ||||||||||||||||| | ||  ||||||||||    
T  89434 gtcttctgcaattcttagacgagattaaatccattgaacaacttttgaagctttaagttttgcatctcctgatgaactacaacttctggtgat 89342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 17398754 - 17398552
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||  |||||||| |||||||||||||| |||     
T  17398754 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgctatacttttccagtcttctgcaattttag 17398655  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||| ||||||||||||| ||||||||||||||||||||||    
T  17398654 gc-gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaaccgcagcttctggtgattcatagcttctgatgaacttgcttct 17398556  T
Q  201 gatg 204  Q
    ||||    
T  17398555 gatg 17398552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 6517516 - 6517728
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||  ||||         |||||||||||| |||||  |||||||| ||||||||||    
T  6517516 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatctcatgctttccaatccttccaaaatagtcgttgctatacttttccagtcttctg 6517615  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||||||||||||| | ||  |||||||||||| ||||||||||||||    
T  6517616 caatctttagacgagtttgaatcctttaaataacttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgatgaa 6517715  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  6517716 cttgcttctgatg 6517728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 10692882 - 10693094
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||| |||||||||||| ||| || |||||||||||||  ||||||||||||||||         ||||||||  ||||    |||||| ||||||||||    
T  10692882 cttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctg 10692981  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||    
T  10692982 caatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgatgaa 10693081  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  10693082 cttgcttctgatg 10693094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 10906648 - 10906860
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||| |||||||||||| ||| || |||||||||||||  ||||||||||||||||         ||||||||  ||||    |||||| ||||||||||    
T  10906648 cttcatacaaacgtactttgtaaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctg 10906747  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||    
T  10906748 caatctttagacgagtttgaatccgttaaacaacttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgatgaa 10906847  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  10906848 cttgcttctgatg 10906860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 6 - 204
Target Start/End: Original strand, 40860703 - 40860901
Alignment:
Q  6 tacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatga 105  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||| || |||| ||||| |||  |||||||| |||||||||||||| |  ||  ||    
T  40860703 tacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaattagccattgccatacttttccagtcttctgcaatttctaggcga 40860802  T
Q  106 gtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||  | ||||| |||||||||||||| ||||||||| |||||||||||||| || || |||||||||| |||| |||||||||||| ||||| |||||    
T  40860803 gttatagtccttgaaacaacttttgaaactttaagttccatctcctgatgaactgtagcttctggtgatacacaacttctgatgaacctgcttatgatg 40860901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 22190877 - 22191081
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatct-ta 99  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||||||||  ||||  |||||||| |||||||||||||| | ||    
T  22190877 cttcgtacaaacgtactatgtcaacgctctttgaagaatcagcatccaatgcatttcaaaatagttgttgccatacttttccagtcttctgcaatttcta 22190976  T
Q  100 agatgagtttgaatcctttaaacaacttttg-aatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgctt 198  Q
    ||   |||| || ||||| ||||| |||||| || ||||||||| || ||| ||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  22190977 ag-caagttagagtccttgaaacagcttttgaaaactttaagttccacctcttgatgaactgcagcttctggtgatacacagcttctgatgaacttgctt 22191075  T
Q  199 ctgatg 204  Q
    ||||||    
T  22191076 ctgatg 22191081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15475223 - 15475019
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||| |||||||||||||||| ||||||||| || | |||||||||||| || ||||||||||||||  ||||||||  | |||||||||||||| |    
T  15475223 cttcgtataaacgtactatgtcaacgctctttgaggagtaagcatccaatgcatttcaaaatagccgttgccatacttttctactcttctgcaatcttta 15475124  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac-ttgcttc 199  Q
    || |||||  ||||||| ||||| |||||||| |||| ||||  || |||||||||| || || |||||||||| |||||||| |||||||| |||||||    
T  15475123 gacgagttaaaatccttgaaacagcttttgaaactttgagttcaatttcctgatgaactgtagcttctggtgatacacagcttttgatgaactttgcttc 15475024  T
Q  200 tgatg 204  Q
    |||||    
T  15475023 tgatg 15475019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3105499 - 3105323
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||| ||||||||||| |||||||||||||| | |||||||| |         ||| |||||||||||||| ||||||||| ||||||||||    
T  3105499 cttcgtacaaacatactatgtcaacgctctttgaagaataaccatccaatacttttcaatcctttcaaaatagccgttggaatacttttccagtcttctg 3105400  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctg 169  Q
    |||||||| || |||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||| |||||    
T  3105399 caatctta-gacgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctg 3105323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 14571167 - 14571267
Alignment:
Q  104 gagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  14571167 gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgat 14571266  T
Q  204 g 204  Q
    |    
T  14571267 g 14571267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 39419814 - 39419612
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||| |||||||||  | ||| |||||||||| || ||| |  |    
T  39419814 cttcgtacaaacgtactatgtcaacgct-tttgaagaattagcatcaaatgcattccaaactagccgttgccacactctttcagtcttttgtaatttcta 39419716  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| ||||| |||||||| |||| ||||  || |||||||||| ||||| |||||||||| |||| ||||||||||||| ||||||    
T  39419715 ggcgagttagagtccttgaaacagcttttgaaactttgagttcaatttcctgatgaactgcagcttctggtgatacacaacttctgatgaactagcttct 39419616  T
Q  201 gatg 204  Q
    ||||    
T  39419615 gatg 39419612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 413033 - 413245
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||| |||||| |||||| |||||||||||||  | ||| ||||||||||         |||| |||||||||    ||||||  |||||||||    
T  413033 cttcgtacaatcgtactttgtcaacgctctttgaagaacaaacattcaatgccttcaaatcctttcaaattagccgttgcttcacttttcgagtcttctg 413132  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||  | ||| ||| |||||||| || ||||||||||||| |||||||||| ||||||||||||| ||||| |||||||||||  ||||||||||||||    
T  413133 caatgcttagacgagattgaatccattgaacaacttttgaagctttaagttgaatctcctgatgaactgcagcttctggtgattttcagcttctgatgaa 413232  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  413233 cttgcttctgatg 413245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 54679961 - 54680157
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| ||||||||||||||||||||  | ||||||||||||||         ||||||||  ||||    |||||| ||||||||||    
T  54679961 cttcgtacaaacgtactttgtcaatgctctttgaagaacaaacatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccagtcttctg 54680060  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||||| | ||| ||||||||  || ||||||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||  |||||||||||||    
T  54680061 caatcattagacgagtttga--ccattaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatga 54680157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 9751620 - 9751416
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||| || |||| |||||||||  | ||| || |||||||| | ||| || |    
T  9751620 cttcgtgcaaacatactatgtcaacgctctttgaagaattagcatccaatgcatttcaaactagccgttgccacactcttccagtcttccgtaattttta 9751521  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac-ttgcttc 199  Q
    |  ||||| || ||||| |||||  |||||||   || || | |||||| ||||||| ||||| |||||||||| || |||||||||||||| |||||||    
T  9751520 ggcgagttagagtccttgaaacaggttttgaaaacttgagctccatctcttgatgaactgcagcttctggtgatacatagcttctgatgaactttgcttc 9751421  T
Q  200 tgatg 204  Q
    |||||    
T  9751420 tgatg 9751416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 17247367 - 17247486
Alignment:
Q  85 tcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttc 184  Q
    |||||||||||  | ||| ||| |||||||| || ||||||||||||| ||||||| | |||||||||||||| ||||| |||||||||||  |||||||    
T  17247367 tcttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagattcatctcctgatgaactgcagcttctggtgattttcagcttc 17247466  T
Q  185 tgatgaacttgcttctgatg 204  Q
    ||||||||||||||||||||    
T  17247467 tgatgaacttgcttctgatg 17247486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20977488 - 20977658
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||| |||||||||| |||| |||| |||| |||||||||||| || ||||||||||||||| | |||||   ||||||||||||| ||      
T  20977488 cttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttct 20977586  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |  ||| |||||||||| |||||||||||||| ||||| |||| |||| |||||||  ||||| |||||||||    
T  20977587 ggcgagcttgaatccttgaaacaacttttgaagctttatgttg-atcttctgatgatctgcagcttctggtga 20977658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 38513909 - 38514102
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatctta- 99  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||||||| ||  ||| |||||||||| | ||| || |||||||||  ||| |||     
T  38513909 cttcgtacaatcgtactatgtcaacgctctttgaagaattaacatccaatgcattttaaactagccgttgtcacactcttccagtcttctttaattttat 38514008  T
Q  100 agatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    ||  || || || ||||| ||||| ||||||||   || |||| |||||| ||||||| ||||| |||| ||||| || |||||||||||||||    
T  38514009 aggcgaattagagtccttgaaacagcttttgaaagcttgagttccatctcttgatgaactgcagcttctagtgatacatagcttctgatgaact 38514102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 27188718 - 27188548
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||| |||||||||| |||| |||| |||| |||||||||||| || |||||||| |||||| | |||||   ||||||||||||| ||      
T  27188718 cttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatagtcgttgtta-actttccaagtcttctgcaattttct 27188620  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |  ||| |||||||||| |||||||||||||| ||||| |||| |||| |||||||  ||||| |||||||||    
T  27188619 ggcgagcttgaatccttgaaacaacttttgaagctttaggttg-atcttctgatgatctgcagcttctggtga 27188548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 55731900 - 55732003
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    ||||||| ||||||  | ||| |||||||||||| ||||||||||||||||  ||||||||||||||||||||||| ||||| ||| |||||||| ||||    
T  55731900 cagtcttttgcaattgttagacgagtttgaatccattaaacaacttttgaagttttaagttgcatctcctgatgaactgcagcttccggtgattctcagc 55731999  T
Q  182 ttct 185  Q
    ||||    
T  55732000 ttct 55732003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 29121401 - 29121557
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||| |||||  |||||||| |||||||         |||||||| |||||    |||||||||||||||||    
T  29121401 cttcgtacaaacgtactttgtcaacgctctttaaagaacaagcatccagtgccttcaaatcctttcaaaatagtcgttgcttcactttttcagtcttctg 29121500  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatct 148  Q
    ||||||| ||| ||| |||||||| ||||||| |||||||| | |||||||||||||    
T  29121501 caatctttagacgaggttgaatccattaaacagcttttgaagccttaagttgcatct 29121557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 3499732 - 3499531
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatc-tta 99  Q
    ||||||||||| |||||||||||| |||| |||||||| ||||||||||||  || |||  |||||||||| |||||  | |||||||||| |||| ||     
T  3499732 cttcgtacaaatgtactatgtcaacgctcattgaagaaatagcatccaatgtatttcaatctagccgttgtcatactcctccagtcttctgtaatctttt 3499633  T
Q  100 agatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcac-agcttctgatgaacttgctt 198  Q
     | |||| |||||||||| ||||| |||||||| || || |||| |||| |||||||  ||||| |||||||||   ||  ||||||||| |||||||||    
T  3499632 tggtgagcttgaatccttgaaacagcttttgaagctctaggttg-atcttctgatgatctgcagcttctggtga---acttgcttctgataaacttgctt 3499537  T
Q  199 ctgatg 204  Q
    ||||||    
T  3499536 ctgatg 3499531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 3793286 - 3793366
Alignment:
Q  124 acttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||| ||||||  ||||||||| ||||||||||| |||||    
T  3793286 acttttgaagctttaagttgcatctcctgatgaactgcagcttctagtgattttcagcttctggtgaacttgcttttgatg 3793366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 16853626 - 16853726
Alignment:
Q  104 gagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    |||||||||||  |||||||||||||||| ||| |||||||||||  |||| || | ||  || ||||||||||||||||||||| ||||||||||||||    
T  16853626 gagtttgaatctgttaaacaacttttgaaccttgaagttgcatcttttgatcaactacaacttatggtgattcacagcttctgataaacttgcttctgat 16853725  T
Q  204 g 204  Q
    |    
T  16853726 g 16853726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 19884733 - 19884946
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||         |||| ||| |||||    |||||| ||||||||||    
T  19884733 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaactagtcgttgcttcacttttccagtcttctg 19884832  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    ||||  | ||| ||| || ||||| | || || | |||||| ||||||||  |||||||||||||||| | ||| |||||||||||  ||||||||||||    
T  19884833 caatgcttagacgagattaaatccatgaa-catcctttgaagctttaagtcttgcatctcctgatgaactacagcttctggtgattgtcagcttctgatg 19884931  T
Q  190 aacttgcttctgatg 204  Q
    |||||||||||||||    
T  19884932 aacttgcttctgatg 19884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 16940047 - 16940183
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg---------ccttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||| |||||         |||| |||||||| |||||  |||||||| ||||||||||    
T  16940047 cttcgtacaaacgtactatgtcaacgctccttgaagaataagcattcaatgcctttcaatcctttcaaaatagtcgttgctatacttttccagtcttctg 16940146  T
Q  92 caatcttaagatgagtttgaatcctttaaacaactttt 129  Q
    ||||||| ||| |||||||||||| |||| || |||||    
T  16940147 caatctt-agacgagtttgaatccattaagcagctttt 16940183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 203
Target Start/End: Complemental strand, 17700835 - 17700680
Alignment:
Q  44 atccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttg 143  Q
    ||||||||| || ||||||||||||||| | |||||   ||||||||||||| ||  |  ||| |||||||||| |||||||||||||| ||||| ||||    
T  17700835 atccaatgcttttcaaaatagccgttgtta-actttccaagtcttctgcaattttctggcgagcttgaatccttgaaacaacttttgaagctttaggttg 17700737  T
Q  144 catctcctgatgaaatgcagtttctggtgattcac-agcttctgatgaacttgcttctgat 203  Q
     |||| |||||||  ||||| |||||||||   ||  ||||||||||||||||||||||||    
T  17700736 -atcttctgatgatctgcagcttctggtga---acttgcttctgatgaacttgcttctgat 17700680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 25651180 - 25651046
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg---------ccttccaaaatagccgttgtaatactttttcagtcttctgcaat 95  Q
    |||||||||||||| ||||| |||||||||||||| ||||| |||||         |||||||||||||||||||    ||||||  |||||||||| ||    
T  25651180 gtacaaacgtactacgtcaacgctctttgaagaataagcattcaatgccttcaaatccttccaaaatagccgttgcttcacttttcaagtcttctgcgat 25651081  T
Q  96 cttaagatgagtttgaatcctttaaacaacttttg 130  Q
    ||| |||  ||||||||||| ||||||||||||||    
T  25651080 ctttagacaagtttgaatccgttaaacaacttttg 25651046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 13576104 - 13575996
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    ||||||||||||||  | ||| ||| || ||||| || ||||   |||||| ||||| |||||||||||||||||| ||||| |||||||||||  ||||    
T  13576104 cagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagc 13576005  T
Q  182 ttctgatga 190  Q
    |||||||||    
T  13576004 ttctgatga 13575996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 204
Target Start/End: Original strand, 8105729 - 8105882
Alignment:
Q  52 ccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcct-ttaaacaacttttgaatctttaagttgcatctcc 150  Q
    |||| ||||||||||||||    | |||| ||||||||||||||| | ||| ||  ||||||||  |||||||||||||||| | ||||||||||||  |    
T  8105729 cctttcaaaatagccgttgcttcaattttccagtcttctgcaatccttagacgaagttgaatcccattaaacaacttttgaagccttaagttgcatcctc 8105828  T
Q  151 tgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    | |||||  |||  |||||||||||   | |||||||| |||||||||||||||    
T  8105829 taatgaacggcaacttctggtgatttttaacttctgataaacttgcttctgatg 8105882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 3483752 - 3483963
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||| ||||||||||||||||         |||||||| |||||    |||||| ||||||||||    
T  3483752 cttcgtacaattgtactttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 3483851  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    ||||  | ||| ||| || ||||| || || |  ||||||| |||||||  ||||||||| | ||||| |  |  ||||||||||   ||||||||||||    
T  3483852 caatgcttagacgagattaaatccattgaatagtttttgaagctttaagtcttgcatctcttaatgaactataacttctggtgatcttcagcttctgatg 3483951  T
Q  190 aacttgcttctg 201  Q
    ||||||||||||    
T  3483952 aacttgcttctg 3483963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 52 - 175
Target Start/End: Complemental strand, 56533081 - 56532957
Alignment:
Q  52 ccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcctttaaa-caacttttgaatctttaagttgcatctcc 150  Q
    |||| ||||||||||||||    | |||||||||||||||||||| | ||| ||| ||||||||  |||| || |||||||| | ||||||| ||||  |    
T  56533081 cctttcaaaatagccgttgcttcattttttcagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagccttaagttacatcctc 56532982  T
Q  151 tgatgaaatgcagtttctggtgatt 175  Q
    | ||||| |||||||||||||||||    
T  56532981 taatgaactgcagtttctggtgatt 56532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 3395621 - 3395835
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  |||||||||||| ||||||  ||||| ||||||||||||| |||         |||||||| |||||    ||||||||||| |||||    
T  3395621 cttcgtacaattgtactatgtcaacgctcttcaaagaactagcatccaatgctttcaaatcctttcaaaatagtcgttgcttcactttttcagttttctg 3395720  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    ||||  | ||| ||  || ||||| || |||||||||||||  |||||||  |||||||||||||||| |  || |||| |||||   || ||||||||     
T  3395721 caatgcttagacgatatttaatccattgaacaacttttgaagatttaagtcttgcatctcctgatgaactatagcttctagtgatcttcaacttctgata 3395820  T
Q  190 aacttgcttctgatg 204  Q
    |||||||||||||||    
T  3395821 aacttgcttctgatg 3395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37435615 - 37435560
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||||  |||||||||||| |||||||||||||  ||||||||||||||||    
T  37435615 cttcgtacaatagtactatgtcaacgctctttgaagaacaagcatccaatgccttc 37435560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 33378561 - 33378636
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctga 202  Q
    |||||| ||| | ||||||||| |||||||| | ||||||||||||||  |||||||||||| || | ||||||||    
T  33378561 tttgaaacttcaggttgcatcttctgatgaacttcagtttctggtgatatacagcttctgatcaaatggcttctga 33378636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 75 - 157
Target Start/End: Complemental strand, 37985609 - 37985525
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaa 157  Q
    |||||||||||||||||| ||  | ||||||| || ||||| || |||||| |||||| |||||||  ||||||||| |||||||    
T  37985609 actttttcagtcttctgcgatgcttagatgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcatgatgaa 37985525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 22675509 - 22675417
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgatt 175  Q
    |||||||||||||  | ||| ||| || ||||| || |||| | |||||| ||||| |||||||||||| ||||| ||||| |||||| ||||    
T  22675509 agtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttatgttgcatctcctaatgaactgcagcttctggggatt 22675417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 17839 - 17637
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||| ||||||||||||||||||| ||||||||||| || ||||||||||||||| |||||||| |||||  ||||||||  |||||||||||||||||     
T  17839 cttcatacaaacgtactatgtcaacgctctttgaaggataagcatccaatgcctttcaaaatagacgttgctatacttttgtagtcttctgcaatctta- 17741  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    || |||||||||||||| ||||| |||||||| |||||||||| ||||||||||||| || || ||||||||||||||||||||||||||||||||||||    
T  17740 gacgagtttgaatccttgaaacagcttttgaagctttaagttgtatctcctgatgaattgaagcttctggtgattcacagcttctgatgaacttgcttct 17641  T
Q  201 gatg 204  Q
    ||||    
T  17640 gatg 17637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 121; Significance: 4e-62; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 27871751 - 27871955
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgct-ctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatctta 99  Q
    |||||||||||||||||||||||| ||| ||||||||||| |||||||||||| || ||||||||||||||  ||||| || ||| |||||||||| |      
T  27871751 cttcgtacaaacgtactatgtcaacgcttctttgaagaataagcatccaatgcatttcaaaatagccgttgccatactattccagacttctgcaatttct 27871850  T
Q  100 agatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
    || ||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  27871851 aggtgaatttgaatccttgaaacaacttttgaagctttaagttgcatttcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttc 27871950  T
Q  200 tgatg 204  Q
    |||||    
T  27871951 tgatg 27871955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 48062945 - 48062742
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||||  |||||||| ||||||||  |||| |  |    
T  48062945 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagtcgttgccatacttttccagtcttcgacaatttcta 48062846  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||| ||| |||||||||||||| |||||||||||||||| ||||||| ||||| |||||||||| |||||||||||||| ||||||||||    
T  48062845 ggcgagtttgaattcttgaaacaacttttgaagctttaagttgcatctcttgatgaactgcagcttctggtgatacacagcttctgatggacttgcttct 48062746  T
Q  201 gatg 204  Q
    ||||    
T  48062745 gatg 48062742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 19339375 - 19339174
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||| |||||  | |||||| ||||||||||||||||| |    
T  19339375 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagtcgttgccacacttttccagtcttctgcaatcttta 19339276  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| |||||  ||||||| |||||||||  ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||    
T  19339275 ggcgagttagagtccttgaaacaggttttgaaactttaagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaacttgcttct 19339176  T
Q  201 ga 202  Q
    ||    
T  19339175 ga 19339174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 14425480 - 14425682
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||| || ||||||||||||||  |||||| | |||||||||||||| |||     
T  14425480 cttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttntccagtcttctgcaatgttag 14425579  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |  || |||||||||  |||| ||| || |||||||||||||    
T  14425580 gc-gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactntagcttctggtgaaacacancttttgntgaacttgcttct 14425678  T
Q  201 gatg 204  Q
    ||||    
T  14425679 gatg 14425682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 21381552 - 21381350
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaag 101  Q
    |||||||| |||||||||||||| ||||||||||||||  ||||||||||| || ||||||||||||||  | |||||| ||||||||||||||||| ||    
T  21381552 ttcgtacagacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagccgttgccacacttttccagtcttctgcaatctttag 21381453  T
Q  102 atgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
      ||||| || ||||| |||||||||||||| || ||||||  ||||||||||||| ||||| |||||||||| |||||||||||||||||| |||||||    
T  21381452 gcgagttagagtccttgaaacaacttttgaaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatgaactagcttctg 21381353  T
Q  202 atg 204  Q
    |||    
T  21381352 atg 21381350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 32264839 - 32264639
Alignment:
Q  5 gtacaaacgtactatgtcaatgct-ctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagat 103  Q
    |||||||||||||||||||| ||| ||||||||||| | |||||||||| || ||||||||||||||  |||||||| |||||||||||||| |  ||      
T  32264839 gtacaaacgtactatgtcaacgcttctttgaagaataaacatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttctaggc 32264740  T
Q  104 gagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    |||||||||||||| ||| |||||||||| |||||||| ||||||||||||||| ||||| |||||||||| |||| ||| |||||| ||| ||||||||    
T  32264739 gagtttgaatccttgaaataacttttgaagctttaagtcgcatctcctgatgaactgcagcttctggtgatacacaacttttgatgatctttcttctgat 32264640  T
Q  204 g 204  Q
    |    
T  32264639 g 32264639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 2265644 - 2265446
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||  ||| |||||         ||||||||||||||  |||||||||||||||||||    
T  2265644 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcattaaataccttcaaatccttccaaaatagccgttgctatactttttcagtcttctg 2265545  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||||||| ||| |||||||||||  ||||||| ||||| || |||||||||||||||||||||||| | ||  |||||||||||| |||||||||||||    
T  2265544 caatctttagacgagtttgaatctgttaaacagcttttaaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgatga 2265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 8182963 - 8183170
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg---------ccttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||| ||||| |||||||| |||||||||||||| |||||| | ||         |||| ||||||||  ||||  |||||||| ||||||||||    
T  8182963 cttcgtacagacgtattatgtcaacgctctttgaagaataagcatcaagtgtctttcaatcctttcaaaatagttgttgctatacttttccagtcttctg 8183062  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| || ||||||||| | |||| ||||||||| || |||| ||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  8183063 caatctta-gacgagtttgaaacttttatacaactttttaagctttgagttgcatctcctgatgaactgcagcttctggtgattcacagcttttgatgaa 8183161  T
Q  192 cttgcttct 200  Q
    |||||||||    
T  8183162 cttgcttct 8183170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 4821507 - 4821718
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc--------caaaatagccgttgtaatactttttcagtcttctgc 92  Q
    ||||||||||||||||| | |||| |||||||||||||  ||||||||||||||||        ||||||||||||||    ||||||  |||||||||     
T  4821507 cttcgtacaaacgtactttttcaacgctctttgaagaacaagcatccaatgccttcaaatctttcaaaatagccgttgctccacttttctagtcttctgt 4821606  T
Q  93 aatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac 192  Q
    |||||| ||| ||||||||||   ||||||| |||||||| |||||||||| |||||| |||||| ||||| |||||||||||  |||||||||| ||||    
T  4821607 aatctttagacgagtttgaatttgttaaacagcttttgaagctttaagttgtatctccggatgaactgcagcttctggtgattttcagcttctgacgaac 4821706  T
Q  193 ttgcttctgatg 204  Q
    ||||||||||||    
T  4821707 ttgcttctgatg 4821718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 15704620 - 15704459
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgcaat 95  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||         |||||||| |||||  |||||||| ||||||||||||||    
T  15704620 gtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctatacttttccagtcttctgcaat 15704521  T
Q  96 cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaa 157  Q
    ||| ||| |||||||||||| ||||||| |||||||| ||||||||| ||||| ||||||||    
T  15704520 ctttagacgagtttgaatccgttaaacagcttttgaagctttaagtttcatcttctgatgaa 15704459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 48236941 - 48236815
Alignment:
Q  78 ttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattca 177  Q
    ||||||||||| ||||||  | ||| ||| |||||||| || ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||      
T  48236941 ttttcagtcttatgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatttt 48236842  T
Q  178 cagcttctgatgaacttgcttctgatg 204  Q
    |||||||||||||||||||||||||||    
T  48236841 cagcttctgatgaacttgcttctgatg 48236815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 14426584 - 14426750
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgcaat 95  Q
    ||||||||||||| |||||| |||||||||||||  ||||||||||||||||         |||||||| |||||    |||||| ||||||||||||||    
T  14426584 gtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaat 14426683  T
Q  96 cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgca 162  Q
    ||| |||||||||||||||| ||||||| ||| |||| |||||||||||||||||||||||| ||||    
T  14426684 ctttagatgagtttgaatccattaaacagcttctgaagctttaagttgcatctcctgatgaactgca 14426750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 204
Target Start/End: Complemental strand, 16543143 - 16542933
Alignment:
Q  3 tcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgca 93  Q
    ||||||||||||||| |||||  |||||||||||||  ||||||||||||||||         |||||||| |||||    |||||| ||||||||||||    
T  16543143 tcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtcttctgca 16543044  T
Q  94 atcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    ||| | | | |||||||||||| ||||||| |||||||| | ||| |||||||||||||||||| ||||| || ||||||||  ||| ||||||||||||    
T  16543043 atcattaaacgagtttgaatccattaaacagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaact 16542944  T
Q  194 tgcttctgatg 204  Q
    | |||||||||    
T  16542943 ttcttctgatg 16542933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 204
Target Start/End: Original strand, 16622519 - 16622729
Alignment:
Q  3 tcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgca 93  Q
    ||||||||||||||| |||||  |||||||||||||  ||||||||||||||||         |||||||| |||||    |||||| ||||||||||||    
T  16622519 tcgtacaaacgtactttgtcagagctctttgaagaacaagcatccaatgccttcaaatcatttcaaaatagtcgttgcttcacttttccagtcttctgca 16622618  T
Q  94 atcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    ||| | | | |||||||||||| ||||||| |||||||| | ||| |||||||||||||||||| ||||| || ||||||||  ||| ||||||||||||    
T  16622619 atcattaaacgagtttgaatccattaaacagcttttgaagcattatgttgcatctcctgatgaactgcagcttatggtgattttcagtttctgatgaact 16622718  T
Q  194 tgcttctgatg 204  Q
    | |||||||||    
T  16622719 ttcttctgatg 16622729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 4412086 - 4411888
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaagaatta-gcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||| ||| || ||||||| ||||||||| |||||| ||||||||||| || |||  |||||||||| |||||| | |||||||||||||| |  |    
T  4412086 ttcgtacagacgcacaatgtcaacgctctttga-gaattaagcatccaatgcttttcaagttagccgttgtcatacttctccagtcttctgcaatttcta 4411988  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| ||||| |||||||| |||||||||  |||||| |||||| ||||| ||||||||||  ||||||||||||||| ||||||||    
T  4411987 ggcgagttagagtccttgaaacagcttttgaaactttaagttcaatctccagatgaactgcagcttctggtgataaacagcttctgatgaatttgcttct 4411888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 24794840 - 24794683
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgct-ctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatctta 99  Q
    |||||||||||||||||||||||| ||| |||||| |||| |||||||||||| || ||||||||||||||  |||||||| |||||||||||||| |      
T  24794840 cttcgtacaaacgtactatgtcaacgcttctttgaggaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttct 24794741  T
Q  100 agatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaa 157  Q
    ||  ||||| || ||||| |||||||||||||| |||| |||| ||  ||||||||||    
T  24794740 aggcgagttagagtccttgaaacaacttttgaaactttgagttccaattcctgatgaa 24794683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 48806000 - 48805801
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatg 104  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||||| || |||| |||||||||  ||| |  | ||||||| || ||| |  ||  |    
T  48806000 gtacgaacgtactatgtcaacgctctttgaagaaatagcatccaatgcatttcaaactagccgttgccatattcctccagtcttatgtaatttctaggcg 48805901  T
Q  105 agtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||| || ||||| ||||| ||||||||   || |||| |||||| ||||||| ||||| |||||||||| || |||||||||||||||| |||||||||    
T  48805900 agttagagtccttgaaacagcttttgaaaacttgagttccatctcttgatgaactgcagcttctggtgatacatagcttctgatgaactttcttctgatg 48805801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 1293063 - 1293184
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||  ||||  |||||||| ||||||| |||||| || |    
T  1293063 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaaaatagttgttgctatacttttccagtcttttgcaat-ttta 1293161  T
Q  101 gatgagtttgaatcctttaaaca 123  Q
    |  |||||||||||||| |||||    
T  1293162 gtcgagtttgaatccttgaaaca 1293184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 204
Target Start/End: Complemental strand, 28622386 - 28622269
Alignment:
Q  87 ttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctg 186  Q
    |||||||||  | ||| ||| |||||||| || ||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||   ||||| ||    
T  28622386 ttctgcaatgcttagacgagattgaatccattgaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgatttttagcttatg 28622287  T
Q  187 atgaacttgcttctgatg 204  Q
    ||||||||||||||||||    
T  28622286 atgaacttgcttctgatg 28622269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 16112009 - 16111797
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||         ||||| || |||||    |||||||| ||||||||    
T  16112009 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaatttcttccaaaaaagtcgttgcttcactttttccgtcttctg 16111910  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    || |||| ||| ||| |||||||| | |||||||||||||| ||||||||||||||  ||||| || ||||| |||||||||||   | ||||| || ||    
T  16111909 cactctttagacgaggttgaatccataaaacaacttttgaagctttaagttgcatcctctgatcaactgcagcttctggtgatttttatcttctaataaa 16111810  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  16111809 cttgcttctgatg 16111797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 35952813 - 35952600
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||||| |||  | ||||||||||||||         |||||||| |||||    |||||| |||||||||     
T  35952813 cttcgtacaaacgtactttgtcaacgctctttgatgaacaaacatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctt 35952714  T
Q  92 caatcttaagatgagtttgaatcct-ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||||| | ||| ||| ||||||||  ||||||| |||||||| | ||||||||||||  |||||||| ||||  |||||||||||   |||||||||| |    
T  35952713 caatccttagacgaggttgaatcccattaaacagcttttgaagccttaagttgcatcctctgatgaactgcaacttctggtgatttttagcttctgataa 35952614  T
Q  191 acttgcttctgatg 204  Q
    ||||||||||||||    
T  35952613 acttgcttctgatg 35952600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 204
Target Start/End: Complemental strand, 4429120 - 4429000
Alignment:
Q  84 gtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagctt 183  Q
    |||||||||||| || ||  ||||| || ||||| ||||| |||||||| |||||||||  |||||| |||||| ||||| ||||||||||  |||||||    
T  4429120 gtcttctgcaatttttaggcgagttagagtccttgaaacagcttttgaaactttaagttcaatctccagatgaactgcagcttctggtgataaacagctt 4429021  T
Q  184 ctgatgaacttgcttctgatg 204  Q
    |||||||| ||||||||||||    
T  4429020 ctgatgaatttgcttctgatg 4429000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 19711138 - 19710925
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatacttt-ttcagtcttct 90  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||||||||||         |||| ||| |||||  |   ||| |||||||||      
T  19711138 cttcgtacaaacgtactttgtcaatgctctttgaaggataagcatccaatgccttcaaatcctttcaaattagtcgttgccaccttttcttcagtctttc 19711039  T
Q  91 gcaatcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
     |  |||| ||| |||||||||||| ||||||| || |||||| ||||| ||||||||| |||||||| | ||||||||||||||  |||| ||||||||    
T  19711038 actctctttagacgagtttgaatccattaaacagctatttgaaactttaggttgcatcttctgatgaactacagtttctggtgatatacagtttctgatg 19710939  T
Q  190 aacttgcttctgat 203  Q
    || | |||||||||    
T  19710938 aaatagcttctgat 19710925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 12174382 - 12174253
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaa-caacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |||||| ||||||||||||||| | ||| ||| ||||||||  |||| || |||||||| ||| ||||||||||  |||||||| ||||| |||||||||    
T  12174382 acttttccagtcttctgcaatccttagacgaggttgaatcccataaaacagcttttgaagctt-aagttgcatcctctgatgaactgcagcttctggtga 12174284  T
Q  174 ttcacagcttctgatgaacttgcttctgatg 204  Q
    ||   |||||||||| |||||||||||||||    
T  12174283 tttttagcttctgataaacttgcttctgatg 12174253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 82 - 203
Target Start/End: Original strand, 9069685 - 9069808
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagtt--gcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||||||||||  | ||| ||  || ||||| || |||||| |||||| |||||||||  |||||||||||||||||  || |||||||||||  ||    
T  9069685 cagtcttctgcaatgcttagacgatattaaatcccttgaacaacctttgaagctttaagttttgcatctcctgatgaaatagagcttctggtgattttca 9069784  T
Q  180 gcttctgatgaacttgcttctgat 203  Q
    |||||||||||||||| |||||||    
T  9069785 gcttctgatgaacttgtttctgat 9069808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 84 - 204
Target Start/End: Original strand, 21695526 - 21695648
Alignment:
Q  84 gtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    ||||||||||||  | ||| ||| || ||||| || ||||||||||||| ||||||||  |||||||| ||||||| | ||| ||||||||||   ||||    
T  21695526 gtcttctgcaatgcttagacgagattaaatccattgaacaacttttgaagctttaagtcttgcatctcttgatgaacttcagcttctggtgatcttcagc 21695625  T
Q  182 ttctgatgaacttgcttctgatg 204  Q
    ||||||||||||||||| |||||    
T  21695626 ttctgatgaacttgcttatgatg 21695648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 33605852 - 33605931
Alignment:
Q  125 cttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||| ||||| |||||||||||||||||| ||||| |||||||||||  |||||||||||||| | | ||||||||    
T  33605852 cttttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaattcgattctgatg 33605931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 7339887 - 7339821
Alignment:
Q  104 gagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctgg 170  Q
    |||||| ||||| |||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||    
T  7339887 gagtttaaatccattaaacaatttttgaagctttaagttgcatctcctgatgaactgcagcttctgg 7339821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 30944448 - 30944271
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||| | |||||| |||||||||||||| ||||||||||||||||         ||||||||  ||||    |||||| || |||||||    
T  30944448 cttcgtacaattgtattttgtcaacgctctttgaagaataagcatccaatgccttcaaatcctttcaaaatagttgttgcttcacttttccaatcttctg 30944349  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctg 169  Q
    ||||  | ||| ||| || ||||| || |||||| |||||| |||||||||||||||||||||||| ||||| |||||    
T  30944348 caatacttagacgagattaaatccgttgaacaacctttgaagctttaagttgcatctcctgatgaactgcagcttctg 30944271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 204
Target Start/End: Original strand, 44467188 - 44467312
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaac-ttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    |||||||||||||  | ||| ||| || ||||| || |||||| ||||||| ||||||||  |||||||||||||||| | ||| || |||||||   ||    
T  44467188 agtcttctgcaatgcttagacgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaacttcagcttttggtgatcttca 44467287  T
Q  180 gcttctgatgaacttgcttctgatg 204  Q
    |||||||||||||||||||||||||    
T  44467288 gcttctgatgaacttgcttctgatg 44467312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 9709837 - 9709729
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagc 181  Q
    ||||||||||||||  | ||| ||| || ||||| || ||||   |||||| ||||| |||||||||||||||||| ||||| |||||||||||  ||||    
T  9709837 cagtcttctgcaatgcttagacgagattaaatccattgaacaggctttgaagctttatgttgcatctcctgatgaactgcagcttctggtgattttcagc 9709738  T
Q  182 ttctgatga 190  Q
    |||||||||    
T  9709737 ttctgatga 9709729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 165 - 204
Target Start/End: Original strand, 5826170 - 5826209
Alignment:
Q  165 ttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5826170 ttctggtgattcacagcttctgatgaacttgcttctgatg 5826209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 2913642 - 2913519
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacag 180  Q
    ||||||||||| | || ||||||| || ||| | || |||| | ||||||  |||||||  |||||||||||||||| | ||||||||||||||   ||     
T  2913642 agtcttctgcattgtttagatgagattaaattcattgaacagcctttgaagatttaagtcttgcatctcctgatgaactacagtttctggtgatcttcat 2913543  T
Q  181 cttctgatgaacttgcttctgatg 204  Q
    |||||||||||||||||| |||||    
T  2913542 cttctgatgaacttgcttttgatg 2913519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 79 - 204
Target Start/End: Original strand, 15088640 - 15088767
Alignment:
Q  79 tttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattc 176  Q
    |||||||||||||||||  | ||| ||| || ||||| || |||| | |||||| ||||| ||  |||||||||||||||| |  || ||||||||||      
T  15088640 tttcagtcttctgcaatgcttagacgagattaaatccattgaacagcctttgaagctttacgtcttgcatctcctgatgaattagagcttctggtgatct 15088739  T
Q  177 acagcttctgatgaacttgcttctgatg 204  Q
     |||||| ||||||||||||||||||||    
T  15088740 tcagcttatgatgaacttgcttctgatg 15088767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33605718 - 33605773
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    |||||||||| |||||| |||||| |||||||||||||  ||||||||||||||||    
T  33605718 cttcgtacaatcgtactttgtcaacgctctttgaagaacaagcatccaatgccttc 33605773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 30945362 - 30945304
Alignment:
Q  111 aatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctg 169  Q
    ||||| || |||||| |||||| |||||||||||||||||||||||| ||||| |||||    
T  30945362 aatccgttgaacaacctttgaagctttaagttgcatctcctgatgaactgcagcttctg 30945304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 331794 - 331893
Alignment:
Q  108 ttgaatcctttaaacaacttttgaatctttaagtt-gcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac--ttgcttctgatg 204  Q
    |||||||| | ||||||| |||||| ||||||||  ||||||||||||| | | ||| ||||||||||   |||||||||||||||  ||||||||||||    
T  331794 ttgaatccataaaacaacctttgaagctttaagtccgcatctcctgatggacttcagcttctggtgatcttcagcttctgatgaacttttgcttctgatg 331893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 30026073 - 30026152
Alignment:
Q  127 tttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||| ||||||||  |||||||| ||||||| |  || ||||||||||   |||||||||||||||||||||||||||    
T  30026073 tttgaagctttaagtcttgcatctcttgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatg 30026152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 203
Target Start/End: Complemental strand, 33691747 - 33691624
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||||||||||  | ||| ||| || ||||| || |||| | |||||| ||||| ||  |||||||||||||||| |  || |||||||||||  ||    
T  33691747 cagtcttctgcaatgcttagacgagattaaatccatttaacagcctttgaagctttatgtcttgcatctcctgatgaactagagcttctggtgattttca 33691648  T
Q  180 gcttctgatgaacttgcttctgat 203  Q
     ||||| |||||||||||||||||    
T  33691647 acttctaatgaacttgcttctgat 33691624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23280083 - 23280028
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||    
T  23280083 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttc 23280028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 10883208 - 10883099
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    |||||||||| |||  | ||| ||| || ||||| || |||||| |||||| ||||||||  |||||||||||||||| | ||| ||||||||||   ||    
T  10883208 cagtcttctgaaatgattagacgagattaaatccattgaacaacctttgaaactttaagtcttgcatctcctgatgaactacagcttctggtgatcttca 10883109  T
Q  180 gcttctgatg 189  Q
    ||||||||||    
T  10883108 gcttctgatg 10883099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 15467951 - 15468004
Alignment:
Q  3 tcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||    
T  15467951 tcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttc 15468004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 204
Target Start/End: Complemental strand, 39284536 - 39284476
Alignment:
Q  144 catctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||| |||||||  | ||| ||||||||||   |||||||||||||||||||||||||||    
T  39284536 catcttctgatgatcttcagcttctggtgatcttcagcttctgatgaacttgcttctgatg 39284476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 1829 - 1627
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||||| || ||||||||||||||  |||||||| |||||||||||||| |||     
T  1829 cttcgtacaaacgtaatatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatgttag 1730  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| |||||||||||||| |||||||||||||||||||||||| || || |||||||||  |||||||| || |||||||||||||    
T  1729 gc-gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgtagcttctggtgaaacacagcttttggtgaacttgcttct 1631  T
Q  201 gatg 204  Q
    ||||    
T  1630 gatg 1627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 725 - 559
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgcaat 95  Q
    ||||||||||||| |||||| |||||||||||||  ||||||||||||||||         |||||||| |||||    |||||| ||||||||||||||    
T  725 gtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaat 626  T
Q  96 cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgca 162  Q
    ||| ||| |||||||||||| | ||||| ||| |||| |||||||||||||||||||||||| ||||    
T  625 ctttagacgagtttgaatccatcaaacagcttctgaagctttaagttgcatctcctgatgaactgca 559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 116; Significance: 4e-59; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 34878 - 34675
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||| || |||||||  |||||  |||||||| |||||||||||||| |  |    
T  34878 cttcatacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatattcgttgccatacttttccagtcttctgcaatttcta 34779  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| |||||||||||||| |||||||||||||||||||| ||| ||||| |||| ||||| |||||||||||||||||||||||||    
T  34778 ggcgagtttgaatccttgaaacaacttttgaaactttaagttgcatctcctgaagaactgcagcttctagtgatacacagcttctgatgaacttgcttct 34679  T
Q  201 gatg 204  Q
    ||||    
T  34678 gatg 34675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 25739 - 25536
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||||||| || ||||||| | ||||  |||||||| ||||||| |||||| |  |    
T  25739 cttcgtacaaacgtactatgtcaacgctttttgaagaataagcatccaatgcatttcaaaatatctgttgccatacttttccagtcttttgcaatttcta 25640  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||| ||||||||    
T  25639 ggcgagtttgaatccttgaaacaacttttgaaactttaagttgcatctcctgatgaactgcagcttctggtgatacatagcttctgatgaagttgcttct 25540  T
Q  201 gatg 204  Q
    ||||    
T  25539 gatg 25536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 5e-55; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21618281 - 21618493
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||         ||||||||| |||||   ||||||| |||||||||     
T  21618281 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttcaaatccttccaaaatagtcgttgctttacttttccagtcttcta 21618380  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| |||||||||||||||| ||||||||||||||| |||||||| | ||| |||||||||||| ||||||||||| ||    
T  21618381 caatctttagaagagtttgaatccgttaaacaacttttgaagctttaagttgcatcttctgatgaactacagcttctggtgattctcagcttctgataaa 21618480  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  21618481 cttgcttctgatg 21618493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 19066130 - 19065927
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    |||||||||||| ||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||  |||||||| |||||||||||||| |  |    
T  19066130 cttcgtacaaacatactatgtcaacgctctttgaagaataagcatccaatgcatttcaaaatagccgttgccatacttttccagtcttctgcaatttcta 19066031  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| ||||| |||||||| ||||||| | |||||||||||||| ||||| ||||||||||  ||||||||||||||||||||||||    
T  19066030 ggcgagttagagtccttgaaacagcttttgaagctttaagatccatctcctgatgaactgcagcttctggtgatatacagcttctgatgaacttgcttct 19065931  T
Q  201 gatg 204  Q
    ||||    
T  19065930 gatg 19065927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 22076519 - 22076307
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||| |||||         |||||||||||| |||||  ||||||||  |||||||||    
T  22076519 cttcgtacaaatgtactatgtcaacgctctttgaagaataagcatcaaatgctttccaatccttccaaaatagtcgttgctatacttttcgagtcttctg 22076420  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||| ||||||||||||| ||||| || |||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||    
T  22076419 caatctttagacgagtttaaatcctttaaacagcttttaaagctttaagttgcatctcctgatgaactacatcttctggtgattcacagcttctgatgaa 22076320  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  22076319 cttgcttctgatg 22076307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 16877250 - 16877462
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaa---------atagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||| ||          |||| |||||    ||||| |||||||||||    
T  16877250 cttcgtacaaacgtactttgtcaacgctctttgaggaattagcatccaattccttcaaatccttttaagatagtcgttgcttcactttctcagtcttctg 16877349  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||| | ||  || ||||||||||||||||||||||||    
T  16877350 caatctttagacgagtttgaatccattaaacaacttttgaagctttaagttgcatctcctgatgaactacaacttttggtgattcacagcttctgatgaa 16877449  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  16877450 cttgcttctgatg 16877462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 33352038 - 33351829
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg---------ccttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||| ||||||| | |||||||||         |||| |||||||||| |||  |||||||| ||||||||||    
T  33352038 cttcgtacaaacgtactatgtcaacgctctt-gaagaataaacatccaatgtttttcaatcctttcaaaatagcc-ttgctatacttttccagtcttctg 33351941  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    || ||||| || |||| ||||||||| ||||| |||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33351940 cactctta-gacgagtgtgaatccttgaaacagcttttgaggctttaagttgcatctcccgatgaaatgcagtttctggtgattcacagcttctgatgaa 33351842  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  33351841 cttgcttctgatg 33351829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 16336164 - 16336366
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||         ||||||||| |||||  |||||||| ||||||||||    
T  16336164 cttcgtacaatcgtactatgtcaacgctctttgaagaataagcattcaatgccttctaatccttccaaaatagtcgttgctatacttttccagtcttctg 16336263  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||| || ||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||  | ||  |||||||||||| ||||||||||| ||    
T  16336264 caatgtttagacgagtttgaatcctttaaacaacttttgaagcttcaagttgcatctcctgatgatctacaacttctggtgattctcagcttctgataaa 16336363  T
Q  192 ctt 194  Q
    |||    
T  16336364 ctt 16336366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 5 - 174
Target Start/End: Original strand, 12349034 - 12349211
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaa---------aatagccgttgtaatactttttcagtcttctgcaat 95  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||| |||         ||||| |||||  |||||||| ||||||||||||||    
T  12349034 gtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgcctttcaatcctttcaaaatagtcgttgctatacttttccagtcttctgcaat 12349133  T
Q  96 cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||| || |||||||||||||| ||||| |||||||| || ||||||||||||||||||||| ||||| ||||| ||||    
T  12349134 ctta-gacgagtttgaatccttgaaacagcttttgaagctctaagttgcatctcctgatgaactgcagcttctgatgat 12349211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 15954740 - 15954952
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||| ||  ||||| ||||||||||         |||| ||| |||||    | |||| ||||||||||    
T  15954740 cttcgtacaaacgtactttgtcaacgctctttgaataacaagcattcaatgccttcaaatcctttcaaattagtcgttgcttcatttttccagtcttctg 15954839  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| ||||||| |||||||| |||||||||||||||| ||||||| | ||| ||||||| |||| ||||||||||| ||    
T  15954840 caatctttagaagagtttgaatccgttaaacagcttttgaagctttaagttgcatctcttgatgaactacagcttctggtaattctcagcttctgataaa 15954939  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  15954940 cttgcttctgatg 15954952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 19833145 - 19832938
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctcttt-gaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttct 90  Q
    |||||||||||||||||||||||| ||||||| || |||  |||||||||||| |||         |||||||| |||||    |||||| |||||||||    
T  19833145 cttcgtacaaacgtactatgtcaacgctcttttgaggaacaagcatccaatgcgttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttct 19833046  T
Q  91 gcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    |||||||| |||||||||||||||| ||||||| ||||| || |||||||||||||||||||||||| | ||  |||||||||||| ||||||||||| |    
T  19833045 gcaatctttagatgagtttgaatccgttaaacagcttttaaagctttaagttgcatctcctgatgaactacatcttctggtgattctcagcttctgataa 19832946  T
Q  191 acttgctt 198  Q
     |||||||    
T  19832945 tcttgctt 19832938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 20488030 - 20487818
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||         ||||||||||||||    |||||| ||||||||||    
T  20488030 cttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagccgttgcttcacttttacagtcttctg 20487931  T
Q  92 caatcttaagatgagtttgaatcct-ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||||||| ||| ||| ||||| ||  |||||||||||||||| | ||||||||||||  |||||||| ||||  |||| ||||||   |||||||||| |    
T  20487930 caatctttagacgaggttgaaccccattaaacaacttttgaagccttaagttgcatcctctgatgaactgcaacttctagtgatttttagcttctgataa 20487831  T
Q  191 acttgcttctgat 203  Q
    |||||||||||||    
T  20487830 acttgcttctgat 20487818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 26589638 - 26589842
Alignment:
Q  2 ttcgtacaaacgtactatgtcaatgctctttgaaga--attagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatctta 99  Q
    |||||||| |||||||||||||| |||||||||| |  ||||||||||||||| || |||| |||| ||||  | ||| ||  ||||||||| ||| |      
T  26589638 ttcgtacagacgtactatgtcaacgctctttgaaaatcattagcatccaatgcatttcaaactagctgttgccacactcttctagtcttctgtaatttct 26589737  T
Q  100 agatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttc 199  Q
    ||  ||||| || || || ||||||||||||||   || |||| |||||| ||||||| ||||| |||||||||| || |||||| ||||||||||||||    
T  26589738 aggcgagttagagtcattgaaacaacttttgaaaacttgagttccatctcttgatgaactgcagcttctggtgatacatagcttcagatgaacttgcttc 26589837  T
Q  200 tgatg 204  Q
    |||||    
T  26589838 tgatg 26589842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 17316637 - 17316467
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||| |||||||||| |||| |||| |||| ||||||| |||| || ||||||||||| ||| | |||||   ||||||||||||| ||      
T  17316637 cttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccgatgcttttcaaaatagccgctgtta-actttccaagtcttctgcaatttttt 17316539  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtga 173  Q
    |  ||| |||||||||| |||||||||||||| ||||| |||| |||| |||||||  ||||| |||||||||    
T  17316538 ggcgagcttgaatccttgaaacaacttttgaagctttaggttg-atcttctgatgatctgcagcttctggtga 17316467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 12423298 - 12423435
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| ||||||||||         |||||||| |||||  |||||||| ||||||||||    
T  12423298 cttcgtacaaaggtactatgtcaacgctctttgaagaataagcatacaatgccttccaatcctttcaaaatagtcgttgctatacttttccagtcttctg 12423397  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttg 130  Q
    || |||| ||| |||||||||||| ||||||| ||||||    
T  12423398 cattctt-agacgagtttgaatccattaaacagcttttg 12423435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 16265179 - 16265050
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| ||||| | ||||||  | ||||||| || ||||| || |||||| ||| || ||||| |||||||||| ||| ||| ||||| ||||||||||    
T  16265179 acttttccagtcctgtgcaatgcttagatgagattaaatccattgaacaacctttcaagctttatgttgcatctcttgacgaactgcagcttctggtgat 16265080  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |  |||||||||||||||||||||||||||    
T  16265079 tttcagcttctgatgaacttgcttctgatg 16265050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 75 - 204
Target Start/End: Complemental strand, 20730733 - 20730604
Alignment:
Q  75 actttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||| ||||||||||||||  | ||||||| || ||||| || |||| | |||||| ||||  ||| |||||||||||||| ||||| |||| |||||    
T  20730733 acttttccagtcttctgcaatacttagatgagattaaatcccttgaacagcctttgaagctttttgttacatctcctgatgaactgcagcttctagtgat 20730634  T
Q  175 tcacagcttctgatgaacttgcttctgatg 204  Q
    |  |||||| ||||||||||||||||||||    
T  20730633 tttcagcttatgatgaacttgcttctgatg 20730604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 21235269 - 21235362
Alignment:
Q  111 aatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||| || |||||| ||| || ||||| |||||||||||||||||| ||||| |||| ||||||  |||||||||||||||||||||||||||    
T  21235269 aatccattgaacaacctttaaagctttatgttgcatctcctgatgaactgcagcttctagtgattttcagcttctgatgaacttgcttctgatg 21235362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 22386958 - 22387035
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||| ||||| ||||||||| |||||||| || || |||||||||| |||||||| ||||||||||||||||||||    
T  22386958 tttgaaactttaggttgcatcttctgatgaactgtagcttctggtgatacacagcttatgatgaacttgcttctgatg 22387035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 200
Target Start/End: Original strand, 22802297 - 22802386
Alignment:
Q  111 aatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    ||||| || |||||| |||||| ||||| |||||||||||||||||| | ||  |||||||||||  |||||||||||||||||||||||    
T  22802297 aatccattgaacaacctttgaagctttatgttgcatctcctgatgaactacaacttctggtgattttcagcttctgatgaacttgcttct 22802386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 26972249 - 26972130
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacag 180  Q
    |||||||||||||  | ||| ||| || ||||| || |||||| |||||| ||||||||  ||||||||||||||||||  || |||||||||||  | |    
T  26972249 agtcttctgcaatgcttagacgagattaaatccattgaacaacatttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgattttctg 26972150  T
Q  181 cttctgatgaacttgcttct 200  Q
    ||||||||||||||||||||    
T  26972149 cttctgatgaacttgcttct 26972130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 32544302 - 32544516
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||  ||||| |||||| |||||||||||||| | |||||||||||||          |||||||| |||||    ||| || ||||||||||    
T  32544302 cttcgtacaattgtactttgtcaacgctctttgaagaataaacatccaatgcctttaaatcctttcaaaatagacgttgcttcactcttccagtcttctg 32544401  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatg 189  Q
    ||||  | ||| ||| || ||||| || |||||| |||||| ||||||||  |||||||||||||||| |  || || ||||||||  ||||||||||||    
T  32544402 caatgcttagacgagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactagagcttatggtgattttcagcttctgatg 32544501  T
Q  190 aacttgcttctgatg 204  Q
    ||||||| |||||||    
T  32544502 aacttgcatctgatg 32544516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 17608329 - 17608223
Alignment:
Q  100 agatgagtttgaatcctttaaacaactt--ttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgct 197  Q
    ||||||| ||||||||  |||||| |||  ||||| ||| | ||||||||| |||||||| |  || ||||||||||  |||||||||||||||||||||    
T  17608329 agatgaggttgaatccaataaacagcttatttgaaacttcaggttgcatcttctgatgaactatagcttctggtgatatacagcttctgatgaacttgct 17608230  T
Q  198 tctgatg 204  Q
    |||||||    
T  17608229 tctgatg 17608223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 139355 - 139268
Alignment:
Q  117 ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||| |||||||| | ||||||||||||  ||||||||   || ||||||||||||   |||||||||| |||||||||||||||    
T  139355 ttaaacagcttttgaagccttaagttgcatcctctgatgaacgacaatttctggtgatttttagcttctgataaacttgcttctgatg 139268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 147376 - 147289
Alignment:
Q  117 ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||| |||||||| | ||||||||||||  ||||||||   || ||||||||||||   |||||||||| |||||||||||||||    
T  147376 ttaaacagcttttgaagccttaagttgcatcctctgatgaacgacaatttctggtgatttttagcttctgataaacttgcttctgatg 147289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19482789 - 19482852
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatag 64  Q
    ||||||||||||| |||||||||| |||| |||| |||| |||||||||||| || ||||||||    
T  19482789 cttcgtacaaacgcactatgtcaacgctccttgaggaataagcatccaatgcttttcaaaatag 19482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 204
Target Start/End: Complemental strand, 34451693 - 34451569
Alignment:
Q  79 tttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattc 176  Q
    |||||||||||||||||  | ||| ||   ||||||| || |||| | |||||||||||||||  |||||||||||||||| |  || ||||||||||      
T  34451693 tttcagtcttctgcaatgcttagacgatactgaatccattgaacagcctttgaatctttaagtcttgcatctcctgatgaactagagcttctggtgat-- 34451596  T
Q  177 acagcttctgatgaacttgcttctgatg 204  Q
     || ||||| ||||||||||||||||||    
T  34451595 -caacttctaatgaacttgcttctgatg 34451569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 20635855 - 20635956
Alignment:
Q  108 ttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgca----gtttctggtgattcacagcttctgatgaacttgcttctga 202  Q
    ||||||||  ||||||||| |||||| ||||| ||||||||| |||||| | || |    | |||||||||| || ||||||||||||||||||||||||    
T  20635855 ttgaatccaataaacaactatttgaaactttaggttgcatcttctgatgtactgtacgtagcttctggtgatacatagcttctgatgaacttgcttctga 20635954  T
Q  203 tg 204  Q
    ||    
T  20635955 tg 20635956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15531736 - 15531681
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||||  ||||| |||||| |||||||||||||  ||||||||||||||||    
T  15531736 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgccttc 15531681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 19086336 - 19086398
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||||||||||| | ||| ||||||||||   |||| ||||||||||||||||||||||    
T  19086336 ttgcatctcctgatgaacttcagcttctggtgatcttcagc-tctgatgaacttgcttctgatg 19086398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 21128396 - 21128459
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||| |||||||| || || ||||||||||  | ||||||||||||||| ||||||||||    
T  21128396 ttgcatcttctgatgaactgtagcttctggtgatataaagcttctgatgaactcgcttctgatg 21128459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 17381558 - 17381595
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaa 38  Q
    ||||||||||||||||| |||||| |||||||||||||    
T  17381558 cttcgtacaaacgtactttgtcaacgctctttgaagaa 17381595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 19624132 - 19624200
Alignment:
Q  108 ttgaatcctttaaacaacttttgaatctttaag--ttgcatctcctgatgaaatgcagtttctggtgat 174  Q
    |||||||| || |||||| |||||| |||||||  ||||||||||||||||| | ||| ||||||||||    
T  19624132 ttgaatccattgaacaacctttgaagctttaagacttgcatctcctgatgaacttcagcttctggtgat 19624200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7230 - 7019
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||| ||||||| | | |||||||||| ||||||||||||         |||||||||||| |||||  |||||||| ||||||||||    
T  7230 cttcgtacaaacgtaccatgtcaacgttgtttgaagaataagcatccaatgctttccaatccttccaaaatagtcgttgctatacttttccagtcttctg 7131  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| | |||||||||||| ||||| |||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  7130 caatcttcagacgggtttgaatccttcaaacagcttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattcacagcttctgatgaa 7031  T
Q  192 cttgcttctgat 203  Q
    ||||||||||||    
T  7030 cttgcttctgat 7019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 9192 - 9403
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||         |||||||| |||||  |||||||| || |||||||    
T  9192 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatccaatgccttctaatccttccaaaatagtcgttgctatacttttccaatcttctg 9291  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||  ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||| | ||  |||||||||||| ||||||||||| ||    
T  9292 caatcttt-gatgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatgaactacaacttctggtgattctcagcttctgataaa 9390  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  9391 cttgcttctgatg 9403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 895 - 696
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||||||| |||||||| |||||||||||||| |||||||||| | || ||||||||| ||||  ||||||||  ||||||||||||| |  |    
T  895 cttcgtacaaacgtattatgtcaacgctctttgaagaataagcatccaatacatttcaaaatagctgttgccatacttttctagtcttctgcaatttata 796  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    || ||||| || ||||| ||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||  |||||||||||||||||||||||||    
T  795 gacgagttagagtccttgaaacagcttttgaaactttaagtttcatctcctgatgaactgcagtttctggtgaaacacagcttctgatgaacttgcttct 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 5 - 204
Target Start/End: Original strand, 3345 - 3553
Alignment:
Q  5 gtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctgcaat 95  Q
    ||||||||||||||| |||| |||||||||||||| | |||||||||||||         |||||||||||||||| |||||||| || |||||||||||    
T  3345 gtacaaacgtactatatcaacgctctttgaagaataaacatccaatgccttcaaatccttccaaaatagccgttgttatacttttccaatcttctgcaat 3444  T
Q  96 cttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttg 195  Q
    ||| ||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||| |  || |||||||||||  ||||||||||| ||||||    
T  3445 ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatgaactatagcttctggtgattttcagcttctgataaacttg 3544  T
Q  196 cttctgatg 204  Q
    |||||||||    
T  3545 cttctgatg 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 60840 - 61052
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||  ||||| |||||||||         |||||||||||||||  |||||||| ||||||||||    
T  60840 cttcgtacaaacgtactatgtcaacgctctttgaagaacaagcattcaatgccttccaatccttccaaaatagccgttgctatacttttccagtcttctg 60939  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||| || ||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||| | ||  |||||||||||| || |||||||| ||    
T  60940 caatttttagacgagtttaaatcctttaaacaacttttgaagttttaagttgcatctcctgatgaactacaacttctggtgattctcaacttctgataaa 61039  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  61040 cttgcttctgatg 61052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 97; Significance: 8e-48; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 9597 - 9808
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcc---------ttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||  ||||||||||||| ||| |||| ||||| |||||||||||||         || |||||||| |||||  |||||||  ||||||||||    
T  9597 cttcgtacagtcgtactatgtcaacgctgtttgtagaataagcatccaatgcccttcaatcctttcaaaatagtcgttgctatactttcccagtcttctg 9696  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| ||  ||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||    
T  9697 caatctta-gacaagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttatgatgaa 9795  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  9796 cttgcttctgatg 9808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 22205 - 21993
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaa---------atagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||| |||||||| |||| ||||||||| |||||||||||||||||||          |||| |||||  |||||| | ||||||||||    
T  22205 cttcgtacaaacgtattatgtcaacgctcattgaagaataagcatccaatgccttccaatccttcaaagatagtcgttgctatacttctccagtcttctg 22106  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||| || ||||| | ||  |||||||||||||||||||||||| ||    
T  22105 caatctttagacgagttttaatcctttaaacaacttttgaacctttaagttgcatcttctaatgaactacaacttctggtgattcacagcttctgataaa 22006  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  22005 cttgcttctgatg 21993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 41 - 204
Target Start/End: Complemental strand, 2736 - 2574
Alignment:
Q  41 agcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag 140  Q
    |||||||||||| || ||||||||||||||  |||||||| |||||||||||||| ||| |  |||||||||||||| ||||| |||||||| ||||| |    
T  2736 agcatccaatgcttttcaaaatagccgttgctatacttttccagtcttctgcaattttaggc-gagtttgaatccttgaaacagcttttgaaactttagg 2638  T
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  2637 ttgcatttcctgatgaactgcagtttctggtgatttacagcttctgatgaacttgcttctgatg 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 95; Significance: 1e-46; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 65484 - 65291
Alignment:
Q  19 tgtcaatgctctttgaagaattagcatccaatgcc---------ttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagttt 109  Q
    |||||| |||||||||||||| |||||||||||||         || |||||||| ||||   |||||||| |||||||||||||||||| || ||||||    
T  65484 tgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaatagtcgtttctatacttttccagtcttctgcaatctta-gacgagttt 65386  T
Q  110 gaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||| ||| | |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  65385 gaatccttgaaatagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatg 65291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 144529 - 144336
Alignment:
Q  19 tgtcaatgctctttgaagaattagcatccaatgcc---------ttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagttt 109  Q
    |||||| |||||||||||||| |||||||||||||         || ||||| || |||||  |||||||| |||||||||||||||||| || ||||||    
T  144529 tgtcaacgctctttgaagaataagcatccaatgccctttaatcctttcaaaacagtcgttgctatacttttccagtcttctgcaatctta-gacgagttt 144431  T
Q  110 gaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||| ||| | |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  144430 gaatccttgaaatagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattcacagcttctgatgaacttgcttctgatg 144336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 95 - 203
Target Start/End: Complemental strand, 164917 - 164808
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    |||| ||| |||||||||||| ||||||| || |||||| ||||| ||||||||| |||||||| | |||||||| |||||  ||||||||||| ||| |    
T  164917 tctttagacgagtttgaatccattaaacagctatttgaaactttaggttgcatctactgatgaactacagtttctagtgatatacagcttctgaggaaat 164818  T
Q  194 tgcttctgat 203  Q
     |||||||||    
T  164817 agcttctgat 164808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 165020 - 164965
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||| ||||||| |||||| ||||||||||| || ||||||||||||||||    
T  165020 cttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttc 164965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0527
Description:

Target: scaffold0527; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 7969 - 8180
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||         ||| |||||||| |||||  |||||||| ||||||||||    
T  7969 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcgaatgcaattcaatcctttcaaaatagtcgttgctatacttttccagtcttctg 8068  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    |||||||| || |||||||||||||| ||||| |||||||| ||||||||| ||||| |||||||| ||||| |||||||||||||||||  |||||| |    
T  8069 caatctta-gacgagtttgaatccttgaaacagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccactgatgta 8167  T
Q  192 cttgcttctgatg 204  Q
    | |||||||||||    
T  8168 cgtgcttctgatg 8180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0527; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 1 - 117
Alignment:
Q  87 ttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctg 186  Q
    ||||||||||||| || |||||||||||||| ||||| |||||||| ||||||||| ||||| |||||||| ||||| |||||||||||||||||  |||    
T  1 ttctgcaatctta-gacgagtttgaatccttgaaacagcttttgaagctttaagttacatcttctgatgaactgcagcttctggtgattcacagccactg 99  T
Q  187 atgaacttgcttctgatg 204  Q
    ||| || |||||||||||    
T  100 atgtacgtgcttctgatg 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 6814 - 6602
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||         |||||||| || ||    |||||| ||||||||||    
T  6814 cttcgtacaaacgtactttgtcaatgctctttgaagaacaagcatccaatgccttcaaatcttttcaaaatagtcggtgcttcacttttccagtcttctg 6715  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||| | |||  ||||||||||| ||||||| |||||||| |||||||||||||||||||||||| | ||| |||||||||||| ||||||||||| ||    
T  6714 caatccttagacaagtttgaatccgttaaacagcttttgaagctttaagttgcatctcctgatgaactacagcttctggtgattctcagcttctgataaa 6615  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  6614 cttgcttctgatg 6602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 215571 - 215359
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||         ||||||||||||||    ||||||  |||||||||    
T  215571 cttcgtacaaacgtactttgtcaacgctctttgaagaacaagcatccaatgccttcaaatcctttcaaaatagccgttgcttcacttttctagtcttctg 215472  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| |||||||||||| ||||||| ||||||||  |||||||||||||||||||| || ||||| |||||||||||  | ||||||||| ||    
T  215471 caatctttagacgagtttgaatccattaaacagcttttgaagttttaagttgcatctcctgataaactgcagcttctggtgattttcggcttctgataaa 215372  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  215371 cttgcttctgatg 215359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 77 - 204
Target Start/End: Complemental strand, 23551 - 23425
Alignment:
Q  77 tttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattc 176  Q
    |||| |||||||||||||||||| || |||||||||||||| ||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  23551 ttttccagtcttctgcaatctta-gacgagtttgaatccttgaaacagcttttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattc 23453  T
Q  177 acagcttctgatgaacttgcttctgatg 204  Q
    |||||||||||||||||||||| |||||    
T  23452 acagcttctgatgaacttgcttttgatg 23425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25473 - 25421
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcc 53  Q
    ||||||||||||||||||||||||  ||||||||||||| |  ||||||||||    
T  25473 cttcgtacaaacgtactatgtcaacactctttgaagaataactatccaatgcc 25421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 78440 - 78228
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||         |||||||| |||||    |||||| ||||||||||    
T  78440 cttcgtacaaacgtactttgtcaacgctctttaaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctg 78341  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||||||| ||| ||||||||||||  |||| | |||||||| ||||||| |||||||| ||||||| | ||| |||||||||||| ||| ||||||||||    
T  78340 caatctttagacgagtttgaatccgataaatagcttttgaagctttaagctgcatctcatgatgaactacagcttctggtgattctcagattctgatgaa 78241  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  78240 cttgcttctgatg 78228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 5393 - 5209
Alignment:
Q  6 tacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatga 105  Q
    |||| |||||||||||||| ||||||||||||||  ||||||||||| || ||||||||| ||||  | || ||| ||||||||||||||||| ||  ||    
T  5393 tacatacgtactatgtcaacgctctttgaagaataggcatccaatgcatttcaaaatagctgttgccacacatttccagtcttctgcaatctttaggcga 5294  T
Q  106 gtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatga 190  Q
    ||| || ||||| ||||| |||||||| || ||||||  ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  5293 gttagagtccttaaaacagcttttgaaactataagttcaatctcctgatgaactgcagcttctggtgatacacagcttctgatga 5209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 104 - 204
Target Start/End: Complemental strand, 246209 - 246109
Alignment:
Q  104 gagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  246209 gagtttgaatccttgaaacaacttttgaagctttaagttgcatctcctgatgaactgcaacttctggtgattcacagcttctgatgaacttgcttctgat 246110  T
Q  204 g 204  Q
    |    
T  246109 g 246109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 211435 - 211599
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc---------cttccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||         ||| |||||||| |||||  |||||||| ||||||||||    
T  211435 cttcgtacaaacgtactatgtcaacgctctttgaagaataagcatcaaatgcattaaaatccttacaaaatagtcgttgctatacttttccagtcttctg 211534  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatga 156  Q
    ||||||| ||| |||||||||||| |||||||||||||||| ||||||| |||||||||||||||    
T  211535 caatctttagacgagtttgaatccgttaaacaacttttgaagctttaagctgcatctcctgatga 211599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 7418 - 7621
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||||||||||| || |||| |||||||||  | ||| ||||||||||||| ||| |  |    
T  7418 cttcgtacaaatgtactatgtcaacgctctttgatgaattagcatccaatgcatttcaaactagccgttgccacactctttcagtcttctgtaatttcta 7517  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |  ||||| || ||||| ||||||||||||||   || |||| |||||| ||||||| |  || |||||||||| || ||||||||||||||||||||||    
T  7518 ggcgagttagagtccttgaaacaacttttgaaaacttgagttccatctcttgatgaactaaagcttctggtgatacatagcttctgatgaacttgcttct 7617  T
Q  201 gatg 204  Q
    ||||    
T  7618 gatg 7621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 204
Target Start/End: Complemental strand, 5664 - 5461
Alignment:
Q  13 gtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgcaatcttaagat 103  Q
    ||||| |||||| |||||||||||||| |||||| |||||||||         ||||||||  ||||   ||||||| ||||||||||||||||| |||     
T  5664 gtactttgtcaacgctctttgaagaataagcatcaaatgccttcaaatcctttcaaaatagttgttgctttacttttccagtcttctgcaatctttagac 5565  T
Q  104 gagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaa---atgcagtttctggtgattcacagcttctgatgaacttgcttct 200  Q
    |||||||||||| ||||||||||||||||||||||| |||||||| ||||||||     |||| |||||||||||| ||||||||||| |||||||||||    
T  5564 gagtttgaatccattaaacaacttttgaatctttaaattgcatcttctgatgaacagcagcagcttctggtgattctcagcttctgataaacttgcttct 5465  T
Q  201 gatg 204  Q
    ||||    
T  5464 gatg 5461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 87674 - 87506
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa 100  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||||||| || |||||||| |||||  ||||||||||||||||||||||| |  |    
T  87674 cttcgtacagacgtactatgtcaacgctctttgaagaatttgcatccaatgcatttcaaaatagtcgttgccatactttttcagtcttctgcaatttcta 87575  T
Q  101 gatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctg 169  Q
    |   |||| || ||||| ||||| |||||||| |||||||||  |||||||||| || | |||||||||    
T  87574 ggcaagttagagtccttgaaacagcttttgaaactttaagttcaatctcctgataaactacagtttctg 87506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 99279 - 99070
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt---------ccaaaatagccgttgtaatactttttcagtcttctg 91  Q
    |||||||||||||||||||||||  || ||||||||||| |||||||||||||||         ||||||||| |||||  |||||||| | ||| ||||    
T  99279 cttcgtacaaacgtactatgtca--gcgctttgaagaataagcatccaatgccttgtaatccttccaaaatagtcgttgctatacttttccggtcatctg 99182  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaa 191  Q
    ||| ||| ||| |||||||||||| ||||||| |||||||| ||||||||||||  |||||||||| | ||  ||||||||||   ||||||||||| ||    
T  99181 caa-ctttagacgagtttgaatccgttaaacagcttttgaagctttaagttgcacttcctgatgaactacaacttctggtgatcttcagcttctgataaa 99083  T
Q  192 cttgcttctgatg 204  Q
    |||||||||||||    
T  99082 cttgcttctgatg 99070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 204
Target Start/End: Complemental strand, 89999 - 89917
Alignment:
Q  122 caacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||| |||||| |||||||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||||    
T  89999 caacctttgaagctttaagttgcatctcctgatgaactgcagcttctggtgattttcagcttctgatgaacttgcttctgatg 89917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 20675 - 20859
Alignment:
Q  18 atgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatc-ttaagatgagtttgaatcct 116  Q
    ||||||||||||||||| ||   |||||||||||| || |||| |||||||||| | |||||   |||||||||||||| ||  | |||| |||||||||    
T  20675 atgtcaatgctctttgaggataaagcatccaatgcttttcaaactagccgttgtca-actttcctagtcttctgcaatctttctggtgagcttgaatcct 20773  T
Q  117 ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    | |||||||||||||| |||||  ||| ||||  |||| |  ||||| |||||||||| |||| |||||||||||||||||||||||    
T  20774 tgaaacaacttttgaagctttagattg-atcttatgataatctgcagcttctggtgatacacaacttctgatgaacttgcttctgat 20859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 203
Target Start/End: Original strand, 10774 - 10958
Alignment:
Q  18 atgtcaatgctctttgaagaattagcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaa-gatgagtttgaatcct 116  Q
    ||||||| ||||||||| ||   ||||||| |||| || |||| || ||||||| | |||||   ||||||||||||||||   | |||| |||||||||    
T  10774 atgtcaacgctctttgaggataaagcatcctatgcttttcaaactatccgttgtca-actttccaagtcttctgcaatctttctggtgagcttgaatcct 10872  T
Q  117 ttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    | |||||||||||||| ||||| |||| ||||  |||| |  ||||| |||||||||| |||| |||||||||||||||||||||||    
T  10873 tgaaacaacttttgaagctttaggttg-atcttatgataatctgcagcttctggtgatacacaacttctgatgaacttgcttctgat 10958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 419 - 207
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatacttt--ttcagtcttc 89  Q
    ||||||||| ||||||| |||||| ||||||||||| || ||||||||||||||||         |||| |||||||||   ||||||  || ||||||     
T  419 cttcgtacagacgtactttgtcaacgctctttgaaggataagcatccaatgccttcaaatcctttcaaattagccgttgc--tactttactttagtcttt 322  T
Q  90 tgcaatcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgat 188  Q
     ||  |||| ||| |||||||||||| ||||||| || |||||| ||||| ||||||||| |||||||| | ||||||||||||||  ||||||||||||    
T  321 cgctctctttagacgagtttgaatccattaaacagctatttgaaactttaggttgcatcttctgatgaagtacagtttctggtgatatacagcttctgat 222  T
Q  189 gaacttgcttctgat 203  Q
      |||||||||||||    
T  221 agacttgcttctgat 207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 13 - 201
Target Start/End: Original strand, 22725 - 22924
Alignment:
Q  13 gtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctgcaatcttaagat 103  Q
    ||||| ||||||  ||||||||||||| ||||||||||||||||         |||||||| |||||    |||||| ||||||||||||||  | |||     
T  22725 gtactttgtcaacactctttgaagaataagcatccaatgccttcaaatcctttcaaaatagtcgttgcttcacttttccagtcttctgcaatgcttagac 22824  T
Q  104 gagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctg 201  Q
    ||| || ||||| || |||||| |||||| ||||||||  |||||||||||||||| | |||  |||||||||   ||||||||||||||||||||||||    
T  22825 gagattaaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaactacagcctctggtgatcttcagcttctgatgaacttgcttctg 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold1331
Description:

Target: scaffold1331; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 1773 - 1602
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc---------caaaatagccgttgtaatactttttcagtcttctg 91  Q
    ||||||| ||||||||| |||||| |||||||||||||  | |||||| |||||||         |||||||| |||||    ||||||  |||||||||    
T  1773 cttcgtaaaaacgtactttgtcaacgctctttgaagaacaatcatccagtgccttcaaatcctttcaaaatagtcgttgcttcacttttcaagtcttctg 1674  T
Q  92 caatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcag 163  Q
    |||| || | | |||||||||||| ||||||| |||||||| |||| ||||||||||||||||||| |||||    
T  1673 caatatttaaacgagtttgaatccattaaacagcttttgaagctttgagttgcatctcctgatgaactgcag 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1331; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 204
Target Start/End: Complemental strand, 512 - 473
Alignment:
Q  165 ttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  512 ttctggtgattttcagcttctgatgaacttgcttctgatg 473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 2804 - 2700
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatg--------ccttccaaaatagccgttgtaatactttttcagtcttctgc 92  Q
    ||||||||||||||||||||||||  |||||||||||||  ||||||||||        ||||||||||||| ||||| ||||||||| |||||||||||    
T  2804 cttcgtacaaacgtactatgtcaacactctttgaagaatacgcatccaatgctttccaaccttccaaaatagtcgttgcaatacttttccagtcttctgc 2705  T
Q  93 aatct 97  Q
    |||||    
T  2704 aatct 2700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 203
Target Start/End: Original strand, 17088 - 17197
Alignment:
Q  95 tcttaagatgagtttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaact 193  Q
    |||| ||| |||||||||||| |||||||||| |||||| ||||| ||||||| | |||||||| | || |||||||||||  ||||||||||||||| |    
T  17088 tctttagacgagtttgaatccattaaacaactatttgaaactttaggttgcattttctgatgaactacaatttctggtgatatacagcttctgatgaaat 17187  T
Q  194 tgcttctgat 203  Q
     |||||||||    
T  17188 agcttctgat 17197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 204
Target Start/End: Original strand, 11447 - 11610
Alignment:
Q  41 agcatccaatgccttccaaaatagccgttgtaatactttttcagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaag 140  Q
    |||||||||||| || |||| |||||||||  | ||| || |||||||||| ||| |  ||  ||||| || ||||| |||||| |||||||   || ||    
T  11447 agcatccaatgcatttcaaactagccgttgccacactcttccagtcttctgtaatttctaggcgagttagagtccttgaaacaaattttgaaaacttgag 11546  T
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    || |||||| ||||||| ||||| |||||||||| || ||||| |||||||||||||| |||||    
T  11547 ttccatctcttgatgaactgcagcttctggtgatacatagcttatgatgaacttgcttttgatg 11610  T

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Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 761 - 962
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgc-cttccaaaatagccgttgtaatactttttcagtcttctgcaa-tctt 98  Q
    ||||||||||||| |||||||||| |||| |||| |||| ||||||||||||  || ||||||||||||||| | |||||   |||||||||||| | ||    
T  761 cttcgtacaaacgaactatgtcaacgctccttgaggaataagcatccaatgctttttcaaaatagccgttgtta-actttcaaagtcttctgcaattttt 859  T
Q  99 aagatgagtttgaatcctttaaacaacttttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcac-agcttctgatgaacttgct 197  Q
      |  ||| |||||||||| ||||| |||||||| ||||| |||| ||||  ||||||  ||||| |||||||||   ||  |||| |||||||||||||    
T  860 ctggcgagcttgaatccttgaaacagcttttgaagctttaggttg-atcttttgatgatctgcagcttctggtga---acttgcttatgatgaacttgct 955  T
Q  198 tctgatg 204  Q
    |||||||    
T  956 tctgatg 962  T

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Target: scaffold0570 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 1617 - 1539
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac-ttgcttctgatg 204  Q
    |||||| ||||| ||||||||| |||||||| |  || |||||||||| ||||||||||||||||| ||||||||||||    
T  1617 tttgaaactttaggttgcatcttctgatgaactatagcttctggtgatacacagcttctgatgaactttgcttctgatg 1539  T

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Target: scaffold0177 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 20332 - 20254
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaac-ttgcttctgatg 204  Q
    |||||| ||||| |||| |||| |||||||| || || |||||||||| ||||||||||||||||| ||||||||||||    
T  20332 tttgaaactttaggttgtatcttctgatgaactgtagcttctggtgatacacagcttctgatgaactttgcttctgatg 20254  T

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Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 203
Target Start/End: Complemental strand, 38044 - 37947
Alignment:
Q  107 tttgaatcctttaaacaact-tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgat 203  Q
    ||||||||||||||| | || ||| || ||||| |||||||||||||||||| |  |||||||||||||  |||||||| |||||| | |||||||||    
T  38044 tttgaatcctttaaatagctatttaaaactttaggttgcatctcctgatgaactatagtttctggtgatatacagcttccgatgaaatagcttctgat 37947  T

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Target: scaffold0132; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 38159 - 38104
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||  ||||||| |||||| ||||||||||| || ||||||||||||||||    
T  38159 cttcgtacggacgtactttgtcaacgctctttgaaggataagcatccaatgccttc 38104  T

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Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 39613 - 39678
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatgtc 206  Q
    ||||||||||||||||| |  || ||||||||||   |||||||||||||||||||||||||||||    
T  39613 ttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgtc 39678  T

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Target: scaffold0022; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 206
Target Start/End: Original strand, 137673 - 137738
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatgtc 206  Q
    ||||||||||||||||| |  || ||||||||||   |||||||||||||||||||||||||||||    
T  137673 ttgcatctcctgatgaactagagcttctggtgatcttcagcttctgatgaacttgcttctgatgtc 137738  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 35402 - 35466
Alignment:
Q  140 gttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||| |||||||| || || |||| |||||  ||||||||||||||||||||||||||||    
T  35402 gttgcatcttctgatgaattgtagcttctagtgatatacagcttctgatgaacttgcttctgatg 35466  T

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Target: scaffold0422 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 204
Target Start/End: Original strand, 11888 - 11994
Alignment:
Q  100 agatgagtttgaatcctttaaacaactt--ttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgct 197  Q
    ||||||| ||||||||  |||||| |||  ||||| ||| | ||||||||| |||||||| || || ||||||||||  ||| ||| |||||||||||||    
T  11888 agatgaggttgaatccaataaacagcttatttgaaacttcaggttgcatcttctgatgaactgtagcttctggtgatatacaacttttgatgaacttgct 11987  T
Q  198 tctgatg 204  Q
    |||||||    
T  11988 tctgatg 11994  T

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Target: scaffold0251 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 7830 - 7948
Alignment:
Q  82 cagtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||| ||||||  | ||| ||| || ||||| || |||| | |||||| ||||||||  ||||||||||||||||||  || ||||||||||   ||    
T  7830 cagtcttttgcaatgcttagacgagattaaatccattgaacagcctttgaagctttaagtcttgcatctcctgatgaaatagagcttctggtgatcttca 7929  T
Q  180 gcttctgatgaacttgctt 198  Q
    |||||||||||||||||||    
T  7930 gcttctgatgaacttgctt 7948  T

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Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15696 - 15641
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||||| ||||||| |||||||||||||||||  || ||||||||||||||||    
T  15696 cttcgtacagacgtactttgtcaatgctctttgaaagataagcatccaatgccttc 15641  T

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Target: scaffold0220 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1871 - 1816
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgccttc 56  Q
    ||||||| | ||||||| |||||| ||||||||||| || ||||||||||||||||    
T  1871 cttcgtatagacgtactttgtcaacgctctttgaaggataagcatccaatgccttc 1816  T

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Target: scaffold0161 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 190
Target Start/End: Complemental strand, 10091 - 9981
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaac-ttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcaca 179  Q
    ||||||||||||   | ||||||| || ||||| || |||||| ||||||| ||||||||  |||||||||||||||| | ||| |||||||||||  ||    
T  10091 agtcttctgcaaagcttagatgagattaaatccattgaacaaccttttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgattttca 9992  T
Q  180 gcttctgatga 190  Q
    | |||||||||    
T  9991 gtttctgatga 9981  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 6477 - 6402
Alignment:
Q  127 tttgaatctttaagttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctga 202  Q
    |||||| ||| | ||||||||| |||||||| | ||||||||||||||  |||||||||||| || | ||||||||    
T  6477 tttgaaacttcaggttgcatcttctgatgaacttcagtttctggtgatatacagcttctgatcaaatggcttctga 6402  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 204
Target Start/End: Original strand, 143276 - 143339
Alignment:
Q  141 ttgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctgatg 204  Q
    ||||||||| |||||||||  || |||| |||||   |||||||||||||||||||||||||||    
T  143276 ttgcatctcgtgatgaaatagagcttctagtgatcttcagcttctgatgaacttgcttctgatg 143339  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 174
Target Start/End: Original strand, 1788 - 1881
Alignment:
Q  83 agtcttctgcaatcttaagatgagtttgaatcctttaaacaacttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgat 174  Q
    ||||||||||||   | ||| ||| |||||||| || |||||| |||||| ||||||||  |||||||||||||||| | ||| ||||||||||    
T  1788 agtcttctgcaaagcttagacgagattgaatccattgaacaacctttgaagctttaagtcttgcatctcctgatgaacttcagcttctggtgat 1881  T

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Target: scaffold0023 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 103609 - 103663
Alignment:
Q  1 cttcgtacaaacgtactatgtcaatgctctttgaagaattagcatccaatgcctt 55  Q
    ||||||||||  ||||| |||||| |||||||||||||  |||||||||||||||    
T  103609 cttcgtacaattgtactttgtcaacgctctttgaagaacaagcatccaatgcctt 103663  T

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Target: scaffold0908 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Complemental strand, 3817 - 3776
Alignment:
Q  161 cagtttctggtgattcacagcttctgatgaacttgcttctga 202  Q
    ||||||||||||||  ||||||||||||||||| ||||||||    
T  3817 cagtttctggtgatatacagcttctgatgaactagcttctga 3776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 161 - 202
Target Start/End: Original strand, 7473 - 7514
Alignment:
Q  161 cagtttctggtgattcacagcttctgatgaacttgcttctga 202  Q
    ||||||||||||||  ||||||||||||||||| ||||||||    
T  7473 cagtttctggtgatatacagcttctgatgaactagcttctga 7514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 5880 - 5801
Alignment:
Q  125 cttttgaatctttaagt--tgcatctcctgatgaaatgcagtttctggtgattcacagcttctgatgaacttgcttctga 202  Q
    |||||||| ||||||||  |||||||||| ||||| | ||| ||||||||||    |||||||||||||||| |||||||    
T  5880 cttttgaagctttaagtcttgcatctcctaatgaacttcagcttctggtgatctttagcttctgatgaacttacttctga 5801  T

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