View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8072_low_4 (Length: 273)
Name: NF8072_low_4
Description: NF8072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8072_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 11 - 257
Target Start/End: Complemental strand, 36040990 - 36040744
Alignment:
| Q |
11 |
ttattcttctaaaggggggttcttgtaataattgtgacaaataaacacaaattgaaattttaaatttgtcattttaacatgatgcagggttaatgagcaa |
110 |
Q |
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| T |
36040990 |
ttatttttctaaaggggggttcttgtaataattgtgacaaataaacacaaattgaaattttaaatttgtcattttaacatgatgcagggttaatgagcaa |
36040891 |
T |
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| Q |
111 |
tatttctcaatgcaaatgttacaaattactattgtggggtcgaaaatgcaaaggattctagcttggtagaattgtaaatgtgcctgaaaatttgactaat |
210 |
Q |
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| T |
36040890 |
taattctcaatgcaaatgttacaaattactattgtggggtcgaaaatgcaaaggattctagcttggtagaattgtaaatgtgcctgaaaatttgactaat |
36040791 |
T |
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| Q |
211 |
acatgtagctgacgaatacattctattgttgaagtcattttttccct |
257 |
Q |
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| T |
36040790 |
acatgtagctgacgaatacattcaattgttgaagtcattttttccct |
36040744 |
T |
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