View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8073_low_4 (Length: 259)
Name: NF8073_low_4
Description: NF8073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8073_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 25 - 233
Target Start/End: Original strand, 31693769 - 31693977
Alignment:
| Q |
25 |
gtttgatttgttctataaataagaaatttcctggaagtggcgacaatgaggctccttcatcaaggaaattgttgatctaatgcaatgacaaacaaacata |
124 |
Q |
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| T |
31693769 |
gtttgatttgttctataaatgagaaatttcgtggaagtggagacaatgaggctccttcatcaaggaaattgttgatctaatgcaatgacaaacaaacata |
31693868 |
T |
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| Q |
125 |
catccttccaatttatgggcataaataaata-gattaccacatgtagcaccaagttctggataaaaatataaataaattatttaaattagagatttttac |
223 |
Q |
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| T |
31693869 |
tatccttccaatttataagcataaataaacatgattaccacatgtggcacgaacttctggatacaaatataaataaattatttaaattagaga-ttttac |
31693967 |
T |
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| Q |
224 |
tgatgttttt |
233 |
Q |
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| T |
31693968 |
tgatgctttt |
31693977 |
T |
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