View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8076_low_1 (Length: 934)

Name: NF8076_low_1
Description: NF8076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8076_low_1
NF8076_low_1
[»] chr8 (54 HSPs)
chr8 (539-920)||(35388566-35388948)
chr8 (17-424)||(35389179-35389586)
chr8 (446-540)||(35389088-35389182)
chr8 (19-161)||(18438568-18438710)
chr8 (24-161)||(18441443-18441580)
chr8 (24-161)||(34823018-34823155)
chr8 (35-158)||(7168025-7168148)
chr8 (24-161)||(2146959-2147095)
chr8 (44-161)||(41858143-41858260)
chr8 (27-157)||(41855306-41855436)
chr8 (778-883)||(35392333-35392438)
chr8 (778-883)||(35403103-35403208)
chr8 (19-94)||(38872927-38873002)
chr8 (24-155)||(42602400-42602531)
chr8 (24-94)||(22577666-22577736)
chr8 (36-161)||(39751008-39751132)
chr8 (24-161)||(40077252-40077389)
chr8 (24-92)||(18205789-18205857)
chr8 (24-94)||(1114744-1114814)
chr8 (24-94)||(21406268-21406338)
chr8 (24-94)||(21800760-21800830)
chr8 (19-120)||(42605231-42605332)
chr8 (101-161)||(43377331-43377391)
chr8 (22-161)||(44052226-44052365)
chr8 (75-161)||(39753050-39753136)
chr8 (24-161)||(22550867-22551003)
chr8 (41-113)||(7172606-7172678)
chr8 (41-161)||(41743824-41743944)
chr8 (86-161)||(5300681-5300756)
chr8 (24-99)||(40740902-40740977)
chr8 (37-99)||(27412333-27412395)
chr8 (45-150)||(3395837-3395942)
chr8 (41-158)||(20549251-20549368)
chr8 (24-113)||(35962289-35962378)
chr8 (22-71)||(36677929-36677978)
chr8 (24-161)||(41250074-41250210)
chr8 (24-64)||(41016445-41016485)
chr8 (24-71)||(184554-184601)
chr8 (24-71)||(8419428-8419475)
chr8 (27-94)||(28646252-28646319)
chr8 (27-94)||(28650836-28650903)
chr8 (24-71)||(32375675-32375722)
chr8 (24-123)||(39601676-39601775)
chr8 (24-94)||(21835181-21835251)
chr8 (24-66)||(26451509-26451551)
chr8 (24-62)||(26663035-26663073)
chr8 (24-66)||(32383207-32383249)
chr8 (24-66)||(32437162-32437204)
chr8 (24-66)||(34366940-34366982)
chr8 (111-161)||(34503147-34503197)
chr8 (26-108)||(35966753-35966835)
chr8 (24-66)||(45133275-45133317)
chr8 (53-94)||(4866435-4866476)
chr8 (24-65)||(43262451-43262492)
[»] chr1 (65 HSPs)
chr1 (17-161)||(49924790-49924934)
chr1 (26-158)||(41804037-41804169)
chr1 (26-161)||(11183120-11183255)
chr1 (19-161)||(46141716-46141858)
chr1 (53-158)||(19053996-19054101)
chr1 (35-161)||(13971998-13972122)
chr1 (17-161)||(29438015-29438159)
chr1 (38-158)||(46973141-46973261)
chr1 (19-158)||(26633467-26633603)
chr1 (24-120)||(52802105-52802201)
chr1 (26-161)||(49927517-49927652)
chr1 (25-161)||(23276111-23276247)
chr1 (24-94)||(3941152-3941222)
chr1 (19-161)||(6437536-6437678)
chr1 (19-161)||(18975117-18975259)
chr1 (25-130)||(19499115-19499218)
chr1 (24-158)||(1656091-1656220)
chr1 (18-87)||(36072377-36072446)
chr1 (24-158)||(13173773-13173906)
chr1 (24-158)||(36076560-36076693)
chr1 (24-123)||(13178134-13178233)
chr1 (24-147)||(35258874-35258997)
chr1 (24-94)||(6562163-6562233)
chr1 (26-108)||(25040080-25040162)
chr1 (24-94)||(44470013-44470083)
chr1 (28-89)||(7981145-7981206)
chr1 (24-161)||(22345195-22345331)
chr1 (24-89)||(48751412-48751477)
chr1 (24-161)||(51271593-51271730)
chr1 (24-99)||(13636124-13636200)
chr1 (47-94)||(4516032-4516079)
chr1 (42-161)||(27484993-27485112)
chr1 (55-158)||(35521551-35521654)
chr1 (24-94)||(6557916-6557986)
chr1 (24-94)||(15047283-15047353)
chr1 (24-158)||(38689869-38690002)
chr1 (24-66)||(44336278-44336320)
chr1 (111-161)||(49874942-49874992)
chr1 (48-94)||(51337539-51337585)
chr1 (24-161)||(8460099-8460235)
chr1 (24-161)||(9711653-9711790)
chr1 (41-158)||(51666658-51666774)
chr1 (24-99)||(19159618-19159694)
chr1 (24-108)||(23359351-23359435)
chr1 (22-62)||(26879295-26879335)
chr1 (46-158)||(36908515-36908627)
chr1 (24-71)||(3943998-3944045)
chr1 (24-71)||(3993845-3993892)
chr1 (24-71)||(8548671-8548718)
chr1 (24-71)||(15051350-15051397)
chr1 (27-90)||(21944385-21944448)
chr1 (24-62)||(3728768-3728806)
chr1 (111-161)||(9618656-9618706)
chr1 (24-66)||(19054252-19054294)
chr1 (24-66)||(19161921-19161963)
chr1 (25-71)||(38119614-38119660)
chr1 (24-66)||(46216427-46216469)
chr1 (24-66)||(50617234-50617276)
chr1 (24-94)||(51289962-51290032)
chr1 (116-161)||(1872042-1872087)
chr1 (41-98)||(19495063-19495120)
chr1 (52-161)||(23272783-23272892)
chr1 (41-94)||(27115842-27115895)
chr1 (24-73)||(29424402-29424451)
chr1 (45-150)||(35527036-35527141)
[»] chr2 (59 HSPs)
chr2 (17-161)||(41497406-41497550)
chr2 (19-161)||(35493338-35493480)
chr2 (27-158)||(45475377-45475508)
chr2 (24-158)||(28342460-28342594)
chr2 (24-161)||(25184832-25184968)
chr2 (26-158)||(2917620-2917752)
chr2 (24-150)||(34921761-34921886)
chr2 (24-161)||(9660057-9660194)
chr2 (41-161)||(41181371-41181491)
chr2 (24-158)||(19187225-19187359)
chr2 (24-150)||(35490625-35490751)
chr2 (44-161)||(41053690-41053807)
chr2 (24-123)||(24601611-24601710)
chr2 (24-123)||(24612404-24612503)
chr2 (43-161)||(24607589-24607707)
chr2 (24-101)||(12908431-12908508)
chr2 (19-107)||(23409498-23409586)
chr2 (24-123)||(29397882-29397981)
chr2 (24-161)||(23346715-23346851)
chr2 (24-161)||(41008930-41009066)
chr2 (24-161)||(41500236-41500373)
chr2 (38-158)||(19186684-19186804)
chr2 (24-120)||(34639316-34639412)
chr2 (24-160)||(41004464-41004599)
chr2 (24-95)||(43491109-43491180)
chr2 (24-161)||(7189953-7190089)
chr2 (24-160)||(29093830-29093971)
chr2 (25-157)||(82265-82396)
chr2 (24-158)||(435280-435413)
chr2 (24-94)||(43943690-43943760)
chr2 (88-161)||(16580479-16580552)
chr2 (24-161)||(24512101-24512238)
chr2 (41-113)||(2648780-2648852)
chr2 (22-66)||(28477067-28477111)
chr2 (35-161)||(1149406-1149532)
chr2 (36-94)||(14181836-14181894)
chr2 (24-66)||(17424161-17424203)
chr2 (25-99)||(17911169-17911243)
chr2 (24-94)||(42177216-42177286)
chr2 (24-66)||(43982228-43982270)
chr2 (47-152)||(12905492-12905597)
chr2 (80-161)||(41052615-41052696)
chr2 (27-94)||(14456503-14456570)
chr2 (24-71)||(22003403-22003450)
chr2 (29-84)||(25964822-25964877)
chr2 (24-71)||(28468665-28468712)
chr2 (24-71)||(41183226-41183273)
chr2 (24-94)||(3795338-3795408)
chr2 (24-66)||(3943194-3943236)
chr2 (36-94)||(27276388-27276446)
chr2 (24-98)||(40156396-40156470)
chr2 (43-161)||(43950263-43950380)
chr2 (24-65)||(2271739-2271780)
chr2 (132-161)||(15488252-15488281)
chr2 (26-71)||(18000256-18000301)
chr2 (26-99)||(24541732-24541805)
chr2 (22-71)||(41564492-41564541)
chr2 (24-61)||(43536136-43536173)
chr2 (69-158)||(45479841-45479930)
[»] chr7 (44 HSPs)
chr7 (22-161)||(34622433-34622572)
chr7 (22-161)||(34623380-34623519)
chr7 (19-161)||(48314608-48314749)
chr7 (52-161)||(46863374-46863483)
chr7 (24-161)||(47776266-47776403)
chr7 (24-161)||(28980174-28980312)
chr7 (24-161)||(47060861-47060997)
chr7 (24-161)||(30355241-30355378)
chr7 (26-158)||(9494810-9494942)
chr7 (24-113)||(37340284-37340373)
chr7 (38-161)||(36392059-36392182)
chr7 (24-161)||(19044228-19044364)
chr7 (24-161)||(20710272-20710408)
chr7 (41-158)||(36186492-36186608)
chr7 (24-113)||(42499391-42499480)
chr7 (170-219)||(42808614-42808663)
chr7 (24-94)||(10705249-10705319)
chr7 (45-95)||(21188423-21188473)
chr7 (24-82)||(42682007-42682065)
chr7 (19-149)||(46860457-46860587)
chr7 (52-161)||(21185553-21185662)
chr7 (26-123)||(34742399-34742496)
chr7 (88-161)||(46596830-46596903)
chr7 (29-161)||(41049196-41049327)
chr7 (24-66)||(9367726-9367768)
chr7 (45-123)||(34139869-34139947)
chr7 (85-158)||(28112779-28112852)
chr7 (24-64)||(17840892-17840932)
chr7 (43-107)||(27453615-27453679)
chr7 (24-68)||(34738391-34738435)
chr7 (24-64)||(40587692-40587732)
chr7 (24-71)||(18105397-18105444)
chr7 (39-98)||(30846812-30846871)
chr7 (36-98)||(33603197-33603260)
chr7 (16-99)||(38555407-38555490)
chr7 (24-71)||(45767863-45767910)
chr7 (58-161)||(48316296-48316399)
chr7 (25-71)||(11629764-11629810)
chr7 (24-62)||(15070388-15070426)
chr7 (24-62)||(35606822-35606860)
chr7 (111-161)||(35839324-35839374)
chr7 (26-71)||(10098121-10098166)
chr7 (26-71)||(15074232-15074277)
chr7 (88-161)||(21190654-21190727)
[»] chr5 (48 HSPs)
chr5 (19-161)||(3603145-3603287)
chr5 (24-150)||(33993225-33993351)
chr5 (24-161)||(18307189-18307325)
chr5 (24-121)||(4204213-4204308)
chr5 (26-158)||(1398541-1398673)
chr5 (24-158)||(18538337-18538471)
chr5 (24-161)||(20200150-20200287)
chr5 (24-161)||(25877556-25877692)
chr5 (26-91)||(30354400-30354465)
chr5 (60-161)||(7796595-7796696)
chr5 (24-161)||(20192287-20192424)
chr5 (25-160)||(7800990-7801125)
chr5 (27-158)||(34682194-34682325)
chr5 (26-161)||(41201662-41201797)
chr5 (24-98)||(33995150-33995224)
chr5 (24-161)||(28388521-28388658)
chr5 (24-113)||(34122506-34122595)
chr5 (26-98)||(8702202-8702274)
chr5 (24-160)||(34123937-34124073)
chr5 (25-161)||(41799770-41799906)
chr5 (52-161)||(18310051-18310160)
chr5 (25-161)||(17966889-17967025)
chr5 (24-123)||(7757297-7757396)
chr5 (42-161)||(13568095-13568214)
chr5 (24-83)||(25497523-25497582)
chr5 (28-161)||(3600270-3600404)
chr5 (24-98)||(27532619-27532693)
chr5 (43-158)||(1397371-1397486)
chr5 (24-99)||(30192488-30192563)
chr5 (27-94)||(42098304-42098371)
chr5 (24-98)||(7017509-7017583)
chr5 (24-66)||(19037472-19037514)
chr5 (24-98)||(28387266-28387340)
chr5 (41-161)||(31094497-31094616)
chr5 (23-113)||(42539374-42539464)
chr5 (41-158)||(24053117-24053234)
chr5 (22-71)||(38855711-38855760)
chr5 (24-93)||(38968097-38968166)
chr5 (36-108)||(39743162-39743234)
chr5 (36-161)||(8680260-8680381)
chr5 (26-65)||(11346037-11346076)
chr5 (24-71)||(13837748-13837795)
chr5 (47-158)||(19228671-19228782)
chr5 (24-71)||(28238163-28238210)
chr5 (27-94)||(42099087-42099154)
chr5 (39-113)||(25499904-25499978)
chr5 (116-161)||(26366822-26366867)
chr5 (80-161)||(42537135-42537216)
[»] chr3 (80 HSPs)
chr3 (26-161)||(7247864-7247999)
chr3 (24-154)||(41802939-41803069)
chr3 (55-161)||(55267375-55267481)
chr3 (24-161)||(6489267-6489400)
chr3 (25-161)||(46989481-46989617)
chr3 (19-161)||(2432940-2433082)
chr3 (45-161)||(19454348-19454464)
chr3 (24-158)||(28611102-28611236)
chr3 (19-161)||(41579721-41579863)
chr3 (24-161)||(11380375-11380512)
chr3 (53-161)||(7837526-7837637)
chr3 (29-161)||(46344871-46345003)
chr3 (26-158)||(55385074-55385206)
chr3 (24-158)||(52570568-52570701)
chr3 (17-94)||(19440257-19440334)
chr3 (24-161)||(41577009-41577146)
chr3 (36-161)||(41805689-41805814)
chr3 (24-150)||(13896878-13897004)
chr3 (24-158)||(29929363-29929497)
chr3 (24-158)||(29978517-29978651)
chr3 (24-94)||(34691626-34691696)
chr3 (24-161)||(52567697-52567834)
chr3 (24-161)||(55207665-55207802)
chr3 (24-123)||(7839503-7839600)
chr3 (24-159)||(20918013-20918148)
chr3 (24-159)||(20926975-20927110)
chr3 (25-93)||(30256006-30256074)
chr3 (18-96)||(9582546-9582624)
chr3 (24-158)||(29918343-29918477)
chr3 (24-158)||(29967496-29967630)
chr3 (87-161)||(32060277-32060351)
chr3 (24-161)||(43476125-43476263)
chr3 (47-161)||(50216879-50216993)
chr3 (83-161)||(55205271-55205349)
chr3 (24-161)||(600546-600683)
chr3 (44-161)||(6505973-6506090)
chr3 (24-157)||(42756097-42756230)
chr3 (24-123)||(19341596-19341695)
chr3 (53-155)||(66841-66942)
chr3 (24-94)||(2743399-2743469)
chr3 (24-66)||(48246441-48246483)
chr3 (22-88)||(48888747-48888813)
chr3 (24-161)||(48250871-48251008)
chr3 (24-161)||(51402400-51402537)
chr3 (24-72)||(2062409-2062457)
chr3 (24-99)||(2647701-2647777)
chr3 (24-71)||(30943213-30943260)
chr3 (24-94)||(9429851-9429921)
chr3 (43-161)||(16647168-16647286)
chr3 (24-66)||(34049109-34049151)
chr3 (52-158)||(43571715-43571821)
chr3 (27-93)||(49219796-49219862)
chr3 (24-66)||(54389824-54389866)
chr3 (24-161)||(4002507-4002643)
chr3 (24-161)||(43478832-43478969)
chr3 (41-161)||(14402989-14403109)
chr3 (46-158)||(45101872-45101984)
chr3 (24-71)||(1293401-1293448)
chr3 (24-71)||(3501897-3501944)
chr3 (24-71)||(41844366-41844413)
chr3 (24-66)||(4004805-4004847)
chr3 (25-71)||(8475850-8475896)
chr3 (52-94)||(20366193-20366235)
chr3 (24-62)||(35743584-35743622)
chr3 (24-161)||(36812770-36812908)
chr3 (24-66)||(36817523-36817565)
chr3 (24-66)||(42760211-42760253)
chr3 (24-66)||(44227141-44227183)
chr3 (24-62)||(46697744-46697782)
chr3 (24-66)||(49140849-49140891)
chr3 (24-94)||(49194954-49195024)
chr3 (24-62)||(50477213-50477251)
chr3 (24-93)||(3112799-3112868)
chr3 (41-94)||(13743294-13743347)
chr3 (19-64)||(34645593-34645638)
chr3 (41-94)||(41137719-41137772)
chr3 (25-62)||(44523456-44523493)
chr3 (26-123)||(49196453-49196550)
chr3 (24-57)||(50998656-50998689)
chr3 (80-161)||(51696573-51696654)
[»] chr4 (64 HSPs)
chr4 (24-161)||(44051094-44051231)
chr4 (26-161)||(49572904-49573039)
chr4 (24-161)||(4979919-4980056)
chr4 (26-161)||(6280791-6280926)
chr4 (42-158)||(21472504-21472620)
chr4 (19-158)||(955729-955868)
chr4 (24-158)||(29700304-29700438)
chr4 (19-158)||(37959717-37959856)
chr4 (19-158)||(51426474-51426613)
chr4 (19-161)||(11494478-11494619)
chr4 (24-158)||(44561332-44561466)
chr4 (24-158)||(958596-958729)
chr4 (24-158)||(21470840-21470974)
chr4 (43-123)||(50274732-50274812)
chr4 (41-161)||(50278817-50278937)
chr4 (24-123)||(1041907-1042006)
chr4 (26-161)||(38464770-38464904)
chr4 (24-94)||(9889995-9890065)
chr4 (24-94)||(15999801-15999871)
chr4 (19-93)||(34151616-34151690)
chr4 (52-158)||(34154432-34154538)
chr4 (24-113)||(56138229-56138323)
chr4 (170-219)||(33051562-33051611)
chr4 (77-161)||(44049086-44049164)
chr4 (45-161)||(56304811-56304926)
chr4 (47-158)||(4768615-4768726)
chr4 (24-94)||(15995723-15995793)
chr4 (24-94)||(19069188-19069258)
chr4 (24-94)||(41023387-41023457)
chr4 (50-93)||(24417444-24417487)
chr4 (24-71)||(38460450-38460497)
chr4 (24-87)||(55407795-55407858)
chr4 (24-66)||(6178112-6178154)
chr4 (24-94)||(17342143-17342213)
chr4 (24-66)||(21022890-21022932)
chr4 (28-98)||(24414832-24414902)
chr4 (24-94)||(34503710-34503780)
chr4 (24-66)||(49094113-49094155)
chr4 (24-61)||(67626-67663)
chr4 (24-161)||(16984163-16984300)
chr4 (25-66)||(20208539-20208580)
chr4 (112-161)||(28320493-28320542)
chr4 (24-65)||(39590570-39590611)
chr4 (26-94)||(9472859-9472927)
chr4 (45-161)||(39588026-39588142)
chr4 (46-158)||(49422080-49422187)
chr4 (24-99)||(55793915-55793991)
chr4 (25-60)||(72510-72545)
chr4 (52-95)||(19993042-19993085)
chr4 (24-71)||(30726743-30726790)
chr4 (24-71)||(37563282-37563329)
chr4 (24-71)||(39773428-39773475)
chr4 (24-71)||(40358282-40358329)
chr4 (24-71)||(54634017-54634064)
chr4 (24-94)||(18884506-18884576)
chr4 (24-66)||(19073657-19073699)
chr4 (24-62)||(31425320-31425358)
chr4 (24-150)||(33383750-33383876)
chr4 (24-66)||(41795358-41795400)
chr4 (24-66)||(51492100-51492142)
chr4 (42-99)||(3403843-3403900)
chr4 (91-160)||(4975752-4975821)
chr4 (22-71)||(26792244-26792293)
chr4 (116-161)||(46097041-46097086)
[»] scaffold0219 (2 HSPs)
scaffold0219 (24-161)||(20114-20252)
scaffold0219 (44-123)||(15675-15754)
[»] chr6 (43 HSPs)
chr6 (41-161)||(29286163-29286283)
chr6 (28-161)||(7361125-7361258)
chr6 (41-161)||(25141098-25141218)
chr6 (24-123)||(31768725-31768824)
chr6 (24-158)||(23958827-23958961)
chr6 (22-94)||(32643521-32643593)
chr6 (24-161)||(11840252-11840389)
chr6 (24-113)||(12783959-12784048)
chr6 (24-93)||(13388710-13388779)
chr6 (19-160)||(13404629-13404770)
chr6 (24-161)||(18605979-18606115)
chr6 (25-161)||(2050963-2051098)
chr6 (24-94)||(31146374-31146444)
chr6 (24-113)||(16192751-16192840)
chr6 (24-161)||(29076325-29076462)
chr6 (24-161)||(29109858-29109995)
chr6 (24-161)||(29111298-29111435)
chr6 (52-139)||(23986011-23986098)
chr6 (53-123)||(7537170-7537240)
chr6 (41-98)||(2258309-2258366)
chr6 (25-94)||(28362734-28362803)
chr6 (53-161)||(2052615-2052721)
chr6 (24-99)||(22305103-22305179)
chr6 (53-161)||(29065674-29065782)
chr6 (53-161)||(29074687-29074795)
chr6 (53-161)||(29079451-29079559)
chr6 (53-161)||(29107260-29107368)
chr6 (41-161)||(35021282-35021402)
chr6 (26-81)||(24088790-24088844)
chr6 (24-66)||(6204856-6204898)
chr6 (24-66)||(11691823-11691865)
chr6 (52-158)||(13479663-13479769)
chr6 (52-161)||(13401420-13401529)
chr6 (53-161)||(29061230-29061338)
chr6 (24-99)||(9049086-9049161)
chr6 (24-71)||(13382653-13382700)
chr6 (55-94)||(24218020-24218059)
chr6 (24-94)||(8193211-8193281)
chr6 (24-62)||(18351645-18351683)
chr6 (24-62)||(26712081-26712119)
chr6 (24-62)||(28249918-28249956)
chr6 (24-73)||(9048097-9048146)
chr6 (24-65)||(30258317-30258358)
[»] scaffold0340 (1 HSPs)
scaffold0340 (24-161)||(1183-1319)
[»] scaffold0184 (1 HSPs)
scaffold0184 (27-123)||(18003-18099)
[»] scaffold0078 (1 HSPs)
scaffold0078 (27-123)||(54745-54841)
[»] scaffold0618 (1 HSPs)
scaffold0618 (29-161)||(3820-3951)
[»] scaffold0360 (1 HSPs)
scaffold0360 (24-161)||(7306-7444)
[»] scaffold0192 (1 HSPs)
scaffold0192 (104-161)||(25886-25943)
[»] scaffold0169 (1 HSPs)
scaffold0169 (101-161)||(1724-1784)
[»] scaffold1379 (1 HSPs)
scaffold1379 (27-161)||(439-573)
[»] scaffold0341 (1 HSPs)
scaffold0341 (24-94)||(17353-17423)
[»] scaffold0116 (1 HSPs)
scaffold0116 (27-161)||(15960-16094)
[»] scaffold0201 (1 HSPs)
scaffold0201 (24-161)||(22337-22474)
[»] scaffold1500 (1 HSPs)
scaffold1500 (24-94)||(761-831)
[»] scaffold0388 (1 HSPs)
scaffold0388 (52-158)||(11740-11846)
[»] scaffold0176 (1 HSPs)
scaffold0176 (45-123)||(794-872)
[»] scaffold0101 (1 HSPs)
scaffold0101 (24-99)||(36536-36612)
[»] scaffold0794 (1 HSPs)
scaffold0794 (24-71)||(5295-5342)
[»] scaffold0744 (1 HSPs)
scaffold0744 (24-71)||(425-472)
[»] scaffold0494 (2 HSPs)
scaffold0494 (24-71)||(5355-5402)
scaffold0494 (24-66)||(860-902)
[»] scaffold0199 (1 HSPs)
scaffold0199 (24-66)||(12390-12432)
[»] scaffold0065 (1 HSPs)
scaffold0065 (24-66)||(65347-65389)
[»] scaffold0038 (1 HSPs)
scaffold0038 (24-62)||(50080-50118)
[»] scaffold0012 (1 HSPs)
scaffold0012 (24-66)||(232834-232876)


Alignment Details
Target: chr8 (Bit Score: 371; Significance: 0; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 539 - 920
Target Start/End: Complemental strand, 35388948 - 35388566
Alignment:
Q  539 tacacacatacttatgatatatagagcaaaataaacgaa-gcaaaacaacctcatcataattaagaagcaacattccatcactccctttgatattccttc 637  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35388948 tacacacatacttatgatatatagagcaaaataaacgaaagcaaaacaacctcatcataattaagaagcaacattccatcactccctttgatattccttc 35388849  T
Q  638 aatggccacatcaaagctgatttcagttatgttaatgttaacctttgcaacaaccattattttgataaatgtggtgattgtaggaggaaagaaaacatgg 737  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35388848 aatggccacatcaaagctgatttcagttatgttaatgttaacctttgcaacaaccattattttgataaatgtggtgattgtaggaggaaagaaaacatgg 35388749  T
Q  738 tgtgtttctaggagtgaagcaggtacccaacaactgattgatgctttaaattatgcatgtggagctggtgctgattgcggtcctattcaacctggtggaa 837  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35388748 tgtgtttctaggagtgaagcaggtacccaacaactgcttgatgctttaaattatgcatgtggagctggtgctgattgcggtcctattcaacctggtggaa 35388649  T
Q  838 gttgttattatccaaacacacttcaaaatcatgcttcctatgctttcaatagctattatcagaaagctcgtggctcttgtgat 920  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35388648 gttgttattatccaaacacacttcaaaatcatgcttcctatgctttcaatagctattatcagaaagctcgtggctcttgtgat 35388566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 17 - 424
Target Start/End: Complemental strand, 35389586 - 35389179
Alignment:
Q  17 attttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaat 116  Q
    ||||||||||| ||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  35389586 attttttggcatttaacaaccaaggttttcctcggcagttaactgcagctggtttttgaatttctcggcagttaactgtcgaagaggcaaaaacgtaaat 35389487  T
Q  117 tactcgtatgtctccaccttatgcaatgtgtcaacaacaattctcnnnnnnnctttctagtttgcagcattaaaacttgtgaccctcaaattaattttct 216  Q
    ||||||||||||||  |||||||||||||||||||||||||||||       ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  35389486 tactcgtatgtctcagccttatgcaatgtgtcaacaacaattctctttttttctttctagtttgcagcattaaaactggtgaacctcaaattaattttct 35389387  T
Q  217 attcaattgctgtgattcacgtttgcttcatgtatatatgtatataaatataaatgtaataactcgtaatgatgaattgctaaacttgtgacaaggttac 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35389386 attcaattgctgtgattcacgtttgcttcatgtatatatgtatataaatataaatgtaataactcgtaatgatgaattgctaaacttgtgacaaggttac 35389287  T
Q  317 tattatagactgatagtgcatacaaccattgttcattttctactatatttaactatgagatataatttgctataaattggatcaccaaaaagaaaatatt 416  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  35389286 aattatagactgatagtgcatacaaccattgttcattttctactatatttaactatgagatataatttgctataaattggaccaccaaaaagaaaatatt 35389187  T
Q  417 tgctttta 424  Q
    ||||||||    
T  35389186 tgctttta 35389179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 446 - 540
Target Start/End: Complemental strand, 35389182 - 35389088
Alignment:
Q  446 tttacttacatctgagtaagacttagacatgaatcataattattttttccgaaagcgacatatttgagacggagggagtattgcatatttattta 540  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35389182 tttacttgcatctgagtaagacttagacatgaatcataattattttttccgaaagcgacatatttgagacggaggaagtattgcatatttattta 35389088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 18438710 - 18438568
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||||| ||| ||||||| |||  |||||||||| |||| |||||||| ||||  |||    
T  18438710 ttttcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtatttta 18438611  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || || ||  ||  |||||||||||||||||||||||||||||    
T  18438610 cttgtgtgcatcagccttatgcaatgtgtcaacaacaattctc 18438568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 18441443 - 18441580
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  |||||||||| |||| ||||||||| ||  | ||| ||||||||||||||||||||||| |||  |||||||||||||  ||||| ||    
T  18441443 ggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggcagttaactgccgagggggcaaaaacgtattttacttgt 18441542  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     ||||||  ||||||| |||||||||||||||||||||    
T  18441543 gtgtctcagccttatgaaatgtgtcaacaacaattctc 18441580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 34823018 - 34823155
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||||||||||||||| ||||||||||||   |||| |||| |||| |||||||||| |||  || |||||||||| |||||  ||    
T  34823018 ggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgagaggacaaaaacgtatattacgtgt 34823117  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || ||| ||||||| ||||||||||||||||||||||    
T  34823118 gtgcctcaaccttatacaatgtgtcaacaacaattctc 34823155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 7168148 - 7168025
Alignment:
Q  35 accgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacc 134  Q
    |||||||||||||||| ||||||||||||||| |||||||||||  ||||||| |||| |||||  |||||||| ||||  ||||| || || |||  ||    
T  7168148 accgaggttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagcc 7168049  T
Q  135 ttatgcaatgtgtcaacaacaatt 158  Q
    ||||| ||||||||||||||||||    
T  7168048 ttatgaaatgtgtcaacaacaatt 7168025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 2146959 - 2147095
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||| ||||||||| ||||   |||| | |||||||||||||  ||  ||  ||||||| |||||||||||    
T  2146959 ggcagttaactaccgaggttttcctcggcagtttactgcagccggtttca-aattccccggcagttaactgctgaggggaaaaaaacgaaaattactcgt 2147057  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || ||| ||||||| ||||||||||||||||||||||    
T  2147058 gtgcctcaaccttatacaatgtgtcaacaacaattctc 2147095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 41858143 - 41858260
Alignment:
Q  44 ttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaat 143  Q
    ||||||| ||||||||||||||| |||||||||||  ||| |||||||||| |||  |||||||||||||  |||||||| | ||||  || |||| |||    
T  41858143 ttcctcggcagttaactgcagccggtttttgaattcttcgccagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaat 41858242  T
Q  144 gtgtcaacaacaattctc 161  Q
    ||||||||||||||||||    
T  41858243 gtgtcaacaacaattctc 41858260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 27 - 157
Target Start/End: Complemental strand, 41855436 - 41855306
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatg 126  Q
    ||||||| |||||||||||||||| |||||||||||||||  ||||||||||  ||| |||||||||| |||   ||||||||||||  |||||| | |     
T  41855436 agttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtattttactcatgtt 41855337  T
Q  127 tctccaccttatgcaatgtgtcaacaacaat 157  Q
    ||||  || |||| |||||||||||||||||    
T  41855336 tctcagccatatgaaatgtgtcaacaacaat 41855306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 778 - 883
Target Start/End: Complemental strand, 35392438 - 35392333
Alignment:
Q  778 atgctttaaattatgcatgtggagctggtgctgattgcggtcctattcaacctggtggaagttgttattatccaaacacacttcaaaatcatgcttccta 877  Q
    ||||||||||||||||||||  |  ||| |||||||| || |||||||| ||||||||||| || | | |||||||||||||||||| ||||||||| ||    
T  35392438 atgctttaaattatgcatgttcaaatggagctgattgtggacctattcagcctggtggaagctgctttaatccaaacacacttcaaagtcatgcttcata 35392339  T
Q  878 tgcttt 883  Q
    ||||||    
T  35392338 tgcttt 35392333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 778 - 883
Target Start/End: Complemental strand, 35403208 - 35403103
Alignment:
Q  778 atgctttaaattatgcatgtggagctggtgctgattgcggtcctattcaacctggtggaagttgttattatccaaacacacttcaaaatcatgcttccta 877  Q
    ||||||||||||||||||||  |  ||| |||||||| || |||||||| ||||||||||| || | | |||||||||||||||||| ||||||||| ||    
T  35403208 atgctttaaattatgcatgttcaaatggagctgattgtggacctattcagcctggtggaagctgctttaatccaaacacacttcaaagtcatgcttcata 35403109  T
Q  878 tgcttt 883  Q
    ||||||    
T  35403108 tgcttt 35403103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 38872927 - 38873002
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||||||  |||||||||||||||| ||||||||||||||| |||||| |||| ||||| |||||||||    
T  38872927 tttttggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctcggtagttaactg 38873002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 24 - 155
Target Start/End: Complemental strand, 42602531 - 42602400
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| |||||||||||| || |||||||||||  |||||||||||||| |||  |  |||||| |||  ||||||||    
T  42602531 ggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccgatagaacaaaaatgtattttactcgt 42602432  T
Q  124 atgtctccaccttatgcaatgtgtcaacaaca 155  Q
     | ||||  || |||| || ||||||||||||    
T  42602431 gtttctcagccatatgaaacgtgtcaacaaca 42602400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 22577736 - 22577666
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| |||||||||| ||| ||| |||||||    
T  22577736 ggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactg 22577666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 39751132 - 39751008
Alignment:
Q  36 ccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacct 135  Q
    ||||||||||||||| ||||||||||||||| ||||   ||||  ||||||||||| || | |  |||||||||||||  |||||||| || ||| || |    
T  39751132 ccgaggttttcctcggcagttaactgcagccggtttca-aattcatcggcagttaattgccaagggggcaaaaacgtattttactcgtgtgcctcaacat 39751034  T
Q  136 tatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||||| ||||||||    
T  39751033 tatgcaatgtgtcaacagcaattctc 39751008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 40077252 - 40077389
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||||||||||| | | |||| |||  || | ||||| || || ||  |||||||||||||  ||||||||    
T  40077252 ggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgagggggcaaaaacgtattttactcgt 40077351  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||  ||||||  |||||||||||||||||||||    
T  40077352 gtttctcagccttatcaaatgtgtcaacaacaattctc 40077389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 92
Target Start/End: Complemental strand, 18205857 - 18205789
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaac 92  Q
    |||||||||| |||||||||||||| | ||||||||||||||| |||||||||||  ||||||||||||    
T  18205857 ggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaac 18205789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 1114814 - 1114744
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||| |||||||| ||||||||||||||| | |||  ||||||||||||||||||||    
T  1114814 ggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactg 1114744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 21406338 - 21406268
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| ||||||||||  |||||||||||||| |||| |||||| |||||||||||||||    
T  21406338 ggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactg 21406268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 21800830 - 21800760
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| ||||||||||  |||||||||||||| |||| |||||| |||||||||||||||    
T  21800830 ggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactg 21800760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 42605231 - 42605332
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||||| |||||| ||| |||||||||||||||  ||||||||||  ||| |||||||||| |||  ||| |||||| |||||||    
T  42605231 ttttcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagggggtaaaaacataaatta 42605330  T
Q  119 ct 120  Q
    ||    
T  42605331 ct 42605332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 43377331 - 43377391
Alignment:
Q  101 gggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||||    
T  43377331 gggcaaaaacgtaaattactcgtgtgcctcagccttatgcaacgtgtcaacaacaattctc 43377391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 44052226 - 44052365
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactc 121  Q
    |||| ||||||| ||||||||||||||||  || ||||||||||| | ||   |||| ||||||| ||||||  |||  |||||||||||| | ||||||    
T  44052226 ttggtagttaactaccgaggttttcctcggtaggtaactgcagccggattgcaaattcctcggcaattaactaccgagggggcaaaaacgtcatttactc 44052325  T
Q  122 gtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || || | | |||||||| ||||||  |||||||||||||    
T  44052326 gtgtgccacaaccttatgtaatgtgggaacaacaattctc 44052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 161
Target Start/End: Original strand, 39753050 - 39753136
Alignment:
Q  75 aatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||| ||||||||||||||| |||  || |||||| ||||||||||||| || ||   |||||| ||||||||||||||||||||||    
T  39753050 aattcctcggcagttaactgccgatgggacaaaaatgtaaattactcgtgtgcctgagccttatacaatgtgtcaacaacaattctc 39753136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 22550867 - 22551003
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | |||  ||    |||||||||||||| |||| |||||   | |||||||||||||    
T  22550867 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaa-gggcatttaggtaaattactcgt 22550965  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  ||||||  ||||||| |||||||||||||    
T  22550966 gtggcacagccttatcaaatgtgtaaacaacaattctc 22551003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 7172606 - 7172678
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    ||||| |||| ||||||| ||||||| |||||  ||||||||||||||||||||| ||  |||||||||||||    
T  7172606 gtttttctcggcagttaattgcagccggttttaaaatttctcggcagttaactgttgatggggcaaaaacgta 7172678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 41743944 - 41743824
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||| ||| ||||||||||||||| | |||  |||| |||||||||||||| ||||  ||||||||  ||||| ||||||| ||   | ||||||||     
T  41743944 gttttcttcggcagttaactgcagccggatttcaaattcctcggcagttaactatcgagggggcaaaagagtaaaatactcgtgtggtacaaccttatgt 41743845  T
Q  141 aatgtgtcaacaacaattctc 161  Q
    || |||| |||||||||||||    
T  41743844 aaagtgtaaacaacaattctc 41743824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 5300756 - 5300681
Alignment:
Q  86 agttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||||||||  || ||||||||||  |||||||| | |||| |||||||  |||||||||||||||||||||    
T  5300756 agttaactgtcgaggggacaaaaacgtattttactcgtgtttctcaaccttatcaaatgtgtcaacaacaattctc 5300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 40740977 - 40740902
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    ||||||||||  |||| |||||||||| ||||||||||||||| ||| || ||  | |||||||||||||||||||    
T  40740977 ggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaa 40740902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 27412333 - 27412395
Alignment:
Q  37 cgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||||||||||||||||| ||||| ||||| || || ||||||||| | ||||||||    
T  27412333 cgaggttttcctcgacagttaactacagccggttttagacttcctcggcagtaagctgtcgaa 27412395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 150
Target Start/End: Complemental strand, 3395942 - 3395837
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatg 144  Q
    |||||| ||||||||||||  || ||||| |||| |||||||||||||||  ||  |||||||||| ||  ||||| || || ||| |||||||| ||||    
T  3395942 tcctcggcagttaactgcaatcaatttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatg 3395843  T
Q  145 tgtcaa 150  Q
    ||||||    
T  3395842 tgtcaa 3395837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 20549251 - 20549368
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    ||||||||||  ||||||||||||||   |||  |||| ||||||||||||||| |||  ||||||||  ||||| ||||||| || | | ||||||||     
T  20549251 gttttcctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtggcacaaccttatgt 20549350  T
Q  141 aatgtgtcaacaacaatt 158  Q
    || |||| ||||||||||    
T  20549351 aaagtgtaaacaacaatt 20549368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 35962378 - 35962289
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    ||||||||||  ||||||||||||||| |||||||||| |||| | |||  |||| |||| |||||||||| |||  |||||||| ||||    
T  35962378 ggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgta 35962289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 36677929 - 36677978
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  36677929 ttggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 36677978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 41250074 - 41250210
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | |||||||||||||| |||| |||||||| | | |||  ||    ||| |||||||||  |||  |||||||||||| ||||||||||    
T  41250074 ggcagttaaccatcgaggttttcctcggcagtaaactgcagtcggatttctaaaacttcgacagttaactaccgag-gggcaaaaacgtcaattactcgt 41250172  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||||||||||  |||||||||||||    
T  41250173 gtgccacaaccttatgcaatgtgggaacaacaattctc 41250210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 41016485 - 41016445
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcag 64  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  41016485 ggcagttaactaccgaggttttcctcggcagttaactgcag 41016445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 184554 - 184601
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  184554 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 184601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 8419475 - 8419428
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  8419475 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 8419428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 28646252 - 28646319
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||  |||| |||||||||| |||||||||||||||  ||||| |||| ||||||| |||||||    
T  28646252 agttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactg 28646319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 28650836 - 28650903
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||  |||| |||||||||| |||||||||||||||  ||||| |||| ||||||| |||||||    
T  28650836 agttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactg 28650903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 32375722 - 32375675
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  32375722 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 32375675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 39601775 - 39601676
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| | |||  ||    ||||||||||||||||||   || |||||||| | ||||||||    
T  39601775 ggcagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagaaggtaaaaacgtcatttactcgt 39601676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 21835181 - 21835251
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||  ||||| ||||||||||  |||||||||||||| |||| |||||| |||| || |||||||    
T  21835181 ggcagttaaataccgaagttttcctcggtagttaactgcagccggtttatgaattcctcgacatttaactg 21835251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 26451551 - 26451509
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  26451551 ggcagttaactaccgaggttttcctcggcagttaactacagcc 26451509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 26663035 - 26663073
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  26663035 ggcagttaactaccgaggttttcctcggcagttaactgc 26663073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 32383207 - 32383249
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||||||||||||||  ||||||||||||||    
T  32383207 ggcagttaactaccgaggttttcctcggtagttaactgcagcc 32383249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 32437162 - 32437204
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||||||||||||||  ||||||||||||||    
T  32437162 ggcagttaactaccgaggttttcctcggtagttaactgcagcc 32437204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 34366982 - 34366940
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||||||||||||||  ||||||||||||||    
T  34366982 ggcagttaactaccgaggttttcctcggaagttaactgcagcc 34366940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 161
Target Start/End: Original strand, 34503147 - 34503197
Alignment:
Q  111 gtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||| || | |  |||||||||||||||||||||||||||||    
T  34503147 gtaaattactcgtgtgacacacccttatgcaatgtgtcaacaacaattctc 34503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 35966753 - 35966835
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaa 108  Q
    |||||||| ||||||| |||| |||||| |||||||||| | | |||  |||| ||||||||||||||| |||  ||||||||    
T  35966753 cagttaactaccgaggatttcttcgacaattaactgcagtcggatttcaaattcctcggcagttaactgccgagggggcaaaa 35966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 45133275 - 45133317
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||||||||| ||||||||||  ||||||||||||||    
T  45133275 ggcagttaacaaccgaagttttcctcggtagttaactgcagcc 45133317  T

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Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 94
Target Start/End: Complemental strand, 4866476 - 4866435
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||||||| |||||||||||||| | ||||||||||    
T  4866476 agttaactgcagccggtttttgaatttcttgacagttaactg 4866435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 43262492 - 43262451
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagc 65  Q
    |||||||||| ||||| |||||||||| ||||||||||||||    
T  43262492 ggcagttaactaccgaagttttcctcggcagttaactgcagc 43262451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 1e-37; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 49924934 - 49924790
Alignment:
Q  17 attttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaat 116  Q
    |||||| ||||||||||  |||| | |||||||| |||||||||| |||| |||||||||||| ||||||||||| || |||| ||||||||||||||||    
T  49924934 atttttcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaat 49924835  T
Q  117 tactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||| || |||  |||||||||||||||||||||||||||||    
T  49924834 tactcgtgtgcctcagccttatgcaatgtgtcaacaacaattctc 49924790  T

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Target: chr1; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 41804037 - 41804169
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| |||||||||||||||| ||||||||||||| | ||||||||||| ||||||||||||||| |||| |||||||| ||||  ||||| || |    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgt 41804136  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    | |||  ||||||  ||||||||||||||||||    
T  41804137 gcctcagccttataaaatgtgtcaacaacaatt 41804169  T

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Target: chr1; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 11183255 - 11183120
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| |||||||||||||||| ||||||||||||||| | |||| |||| ||| ||||||||||||| |  | |||||||||||  ||||||||||    
T  11183255 cagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttactcgtat 11183156  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     ||||  ||||||  |||||||||||||||||||||    
T  11183155 ttctcagccttatcaaatgtgtcaacaacaattctc 11183120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 46141858 - 46141716
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||||| |||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||| |||  |||||||| ||||  |||    
T  46141858 ttttcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtatttta 46141759  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || || |  |||  ||||||||||| |||||||||||||||||    
T  46141758 cttgtgtacctcagccttatgcaatatgtcaacaacaattctc 46141716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 53 - 158
Target Start/End: Complemental strand, 19054101 - 19053996
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||  |||||||| | ||||  ||||||| ||||||||||||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgtcaaca 19054002  T
Q  153 acaatt 158  Q
    ||||||    
T  19054001 acaatt 19053996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 13972122 - 13971998
Alignment:
Q  35 accgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacc 134  Q
    |||||||||||||||| | |||||||||||||||||||| |||| ||||||||| ||||| |||| |||||||||||||  ||||| || | ||||  ||    
T  13972122 accgaggttttcctcggctgttaactgcagccagttttt-aattcctcggcagt-aactgccgaaggggcaaaaacgtattttacttgtgtttctcagcc 13972025  T
Q  135 ttatgcaatgtgtcaacaacaattctc 161  Q
    ||||| |||||||||||||||||||||    
T  13972024 ttatgaaatgtgtcaacaacaattctc 13971998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 29438015 - 29438159
Alignment:
Q  17 attttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaat 116  Q
    |||||| |||||||||  ||||||||||||||||  |||||||||||||| |||||| ||| | || ||||||||||| |||  ||||||||||||||||    
T  29438015 atttttcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaacgtaaat 29438114  T
Q  117 tactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || |||| || | | |||||||  ||||||  |||||||||||||    
T  29438115 tattcgtgtgccacaaccttatcaaatgtgggaacaacaattctc 29438159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 38 - 158
Target Start/End: Complemental strand, 46973261 - 46973141
Alignment:
Q  38 gaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacctta 137  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| | |  |||||||| ||||  ||||| || ||||||  ||| |    
T  46973261 gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttacttgtgtgtctcagcctaa 46973162  T
Q  138 tgcaatgtgtcaacaacaatt 158  Q
    || ||||||||||||||||||    
T  46973161 tgaaatgtgtcaacaacaatt 46973141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 26633603 - 26633467
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| |||||||||||||||| |||||||||||| || |||||||||||  |||| |||||||   |||  |||||||| ||||  |||    
T  26633603 ttttcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagttaac---cgagggggcaaaagcgtatttta 26633507  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    || || || ||| |||||||| ||||||||||||||||||    
T  26633506 cttgtgtgcctcaaccttatgaaatgtgtcaacaacaatt 26633467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 24 - 120
Target Start/End: Complemental strand, 52802201 - 52802105
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattact 120  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | |||  |||| ||||||||||||||| |||  ||||||||| ||||||||||    
T  52802201 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaaaagtaaattact 52802105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 49927517 - 49927652
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| ||||||||||| |||| |||||||||  |||| |||||| ||||  |||||||||||||| |||  || ||||||||||  |||||||| |    
T  49927517 cagttaactaccgaggtttttctcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttactcgtgt 49927616  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     ||||  || |||| |||||||||||||||||||||    
T  49927617 ttctcggccatatgaaatgtgtcaacaacaattctc 49927652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 23276111 - 23276247
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    ||||||||| | |||||||||||||| |||||||||| |||| | |||| |||| ||| ||||||||||| |||  |||||||||||||  ||||||||     
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtg 23276210  T
Q  125 tgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | ||||  ||||||  |||| || |||||||||||||    
T  23276211 tttctcagccttatcaaatgcgtgaacaacaattctc 23276247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 3941152 - 3941222
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| ||||||||||  ||||||||||||||||||| |||||| |||||||||||||||    
T  3941152 ggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaactg 3941222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 6437536 - 6437678
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| ||||| |||| |||||||||||||| |  |||||||||||| |  || |||| || ||||||||||||||| |||  |||||||| ||||  |||    
T  6437536 ttttcggcagataactaccgaggttttccttggtagttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtatttta 6437635  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || || || |||  | |||||||||||||||||||||||||||    
T  6437636 cttgtgtgcctcagctttatgcaatgtgtcaacaacaattctc 6437678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 18975117 - 18975259
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||||| |||||||||  |||||||||||| |||||| || |||| |||| |||||||| | |||  |||||||||||||  |||    
T  18975117 ttttcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtatttta 18975216  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || || |  |||  | |||| ||||||||||||||||||||||    
T  18975217 cttgtgtacctcagctttatacaatgtgtcaacaacaattctc 18975259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 130
Target Start/End: Original strand, 19499115 - 19499218
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    ||||||||| || ||||||||||||| |||||||||||||||   |||| |||||||| |||||||||||||||  |||||||||||||  ||||| ||     
T  19499115 gcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcga--gggcaaaaacgtattttacttgtg 19499212  T
Q  125 tgtctc 130  Q
    ||||||    
T  19499213 tgtctc 19499218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 1656091 - 1656220
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||||||| |||||||||||||||||| |  |||||||||| ||  ||||    |||||| | |||||||||| ||  ||||||||    
T  1656091 ggcagttaactaccgaggtttttctcgacagttaactgcaggcgatttttgaattcctaagcag----ctgtcg-aggggcaaaaacatattttactcgt 1656185  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     | |||| |||||||| ||||||||||||||||||    
T  1656186 gtttctcaaccttatgaaatgtgtcaacaacaatt 1656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 36072446 - 36072377
Alignment:
Q  18 ttttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcag 87  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||||||  ||||| |||||||||||||    
T  36072446 tttttcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatttctcggcag 36072377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 13173906 - 13173773
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  || |||||||||||| | ||||||||||||| ||||||||| ||| | ||||||||||| |||  ||||||||  |||  ||||| ||    
T  13173906 ggcagttaactgccaaggttttcctcggctgttaactgcagccggtttttgaa-ttcccagcagttaactgccgagggggcaaaatagtattttacttgt 13173808  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||| ||||||||||||||||||    
T  13173807 gtgcctcagccttatgaaatgtgtcaacaacaatt 13173773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 36076560 - 36076693
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||| || | |||||||||||||| ||||||||||||||| ||||||||||| |||||  |||||||  |||| |||  ||||||||  ||||| ||    
T  36076560 ggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaa-ggggtaaaacgtattttacttgt 36076658  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     | ||||  ||||||| |||||||||||| |||||    
T  36076659 gtttctcagccttatgaaatgtgtcaacagcaatt 36076693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 13178134 - 13178233
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||   |||||||||||||  ||||||||||||||  |||||| |||||||| ||||||||||| |||  | |||||||||||  ||||||||    
T  13178134 ggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtattttactcgt 13178233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 35258874 - 35258997
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | ||||||||||||||   ||||||||||||| | |||| |||| ||||||||||||||| |||||| |||   |||||  ||||| ||    
T  35258874 ggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctcggcagttaactgccgaatgagcatttacgtattttacttgt 35258973  T
Q  124 atgtctccaccttatgcaatgtgt 147  Q
     ||||||  ||||||| |||||||    
T  35258974 gtgtctcagccttatgaaatgtgt 35258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 6562163 - 6562233
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||| |||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  6562163 ggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 6562233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 25040080 - 25040162
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaa 108  Q
    |||||||| ||| ||||||||||||||| ||||||| |||| |||||  ||||||||| |||||||||| |||| || |||||    
T  25040080 cagttaactaccaaggttttcctcgacaattaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaa 25040162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 44470013 - 44470083
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  44470013 ggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 44470083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 7981145 - 7981206
Alignment:
Q  28 gttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagtt 89  Q
    |||||| |||||||||||||||| ||||||| |||||||  ||||| |||||||||||||||    
T  7981145 gttaactaccgaggttttcctcggcagttaattgcagccgattttttaatttctcggcagtt 7981206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 22345331 - 22345195
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||| |||  ||| ||||||||||||||| ||||   |||| ||||||||||||||| |||  |   |||||||||||||||||||    
T  22345331 ggcagttaactaccgaggattttttcggcagttaactgcagccggtttca-aattcctcggcagttaactgccgatggaataaaaacgtaaattactcgt 22345233  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||  |||||||||| | ||||||||    
T  22345232 gtgccccgaccttatagaatgtgtcaatagcaattctc 22345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 48751412 - 48751477
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagtt 89  Q
    |||||||||| |||||||||||||||| || |||||||||||| | |||| |||| ||||||||||    
T  48751412 ggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagtt 48751477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 51271593 - 51271730
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| || |||||||||||| | |||  ||    |||||||||||||| |||  |||||||||||| | |||| |||    
T  51271593 ggcagttaaccaccgaggttttcctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcatttacccgt 51271692  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||| ||| ||  |||||||||||||    
T  51271693 gtggcacaaccttatgtaatttgggaacaacaattctc 51271730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 13636124 - 13636200
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | ||||| ||  | |||||||||||||| ||||    
T  13636124 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 13636200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 4516079 - 4516032
Alignment:
Q  47 ctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||    
T  4516079 ctcggcagttaactgcagccggtttttgaattcctcggcagttaactg 4516032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 161
Target Start/End: Complemental strand, 27485112 - 27484993
Alignment:
Q  42 ttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgca 141  Q
    |||| |||| ||||||||||||||| | |||| |||| || |||||||||||| |||  |||||||||||||  |||||||| | ||||  ||||||  |    
T  27485112 tttttctcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatcaa 27485013  T
Q  142 atgtgtcaacaacaattctc 161  Q
    |||||  |||| ||||||||    
T  27485012 atgtgggaacagcaattctc 27484993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 35521654 - 35521551
Alignment:
Q  55 ttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaac 154  Q
    |||||||||||| |||||| | || ||||||||||||||| |||  |||||||| ||||  ||||| || || |||  ||||||  ||||||||||||||    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaac 35521555  T
Q  155 aatt 158  Q
    ||||    
T  35521554 aatt 35521551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 6557986 - 6557916
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||| ||||||||| |||||||||||||||   |||  |||| |||||||||||||||    
T  6557986 ggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactg 6557916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 15047353 - 15047283
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||||  ||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  15047353 ggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 15047283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 38690002 - 38689869
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||| | ||||||||||||||| | ||| ||||| |||| || ||||||  |||  ||| |||| ||||  |||||| |    
T  38690002 ggcagttaactaccgaggttttccttggcagttaactgcagcc-ggtttcgaattcctcgacatttaactaccgagggggtaaaagcgtattttactcat 38689904  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || | |  | ||||||||||||||||||||||||    
T  38689903 gtgacacagctttatgcaatgtgtcaacaacaatt 38689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 44336320 - 44336278
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  44336320 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 44336278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 49874992 - 49874942
Alignment:
Q  111 gtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||| || | | ||||||||||||||||||||||||||||||    
T  49874992 gtaaattactcgtgtgacacaaccttatgcaatgtgtcaacaacaattctc 49874942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 94
Target Start/End: Original strand, 51337539 - 51337585
Alignment:
Q  48 tcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||||||||||| |||||| |||| |||||||||||||||    
T  51337539 tcgacagttaactgcagccggttttttaattcctcggcagttaactg 51337585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 8460099 - 8460235
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||| ||||||| | ||||||||||||||| | |||  |||| |||||  |||||||  |||  || |||||||||| ||||||| |    
T  8460099 ggcagttaactaccgagattttccttggcagttaactgcagcc-gatttcaaattcctcggttgttaactaccgaggggacaaaaacgtatattactcat 8460197  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  ||||||  |||||||||||| ||||||||    
T  8460198 gtgcctcagccttatagaatgtgtcaacagcaattctc 8460235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 9711653 - 9711790
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  ||||||||||||||| |||||||||||  || | |||  |||| |||||||||||||||  ||  |||||||| ||||  ||||| ||    
T  9711653 ggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcgtattttactagt 9711752  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||  ||||||  |||||||||||||    
T  9711753 gtgccacaaccttatcaaatgtgggaacaacaattctc 9711790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 51666658 - 51666774
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||  ||||||||||||||| | ||| ||||| ||||||| ||||||| |||  |||||||| ||||  |||||||| || | |  | ||||||    
T  51666658 gttttcctcagcagttaactgcagcc-gatttcgaattactcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagctttatgc 51666756  T
Q  141 aatgtgtcaacaacaatt 158  Q
    |||||||||||| |||||    
T  51666757 aatgtgtcaacatcaatt 51666774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 19159694 - 19159618
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||| |||||||||||||| | ||||||||||||||| | ||||| ||  | |||||||||||||| ||||    
T  19159694 ggcagttaactaccgaggttttccttggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 19159618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 23359351 - 23359435
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaa 108  Q
    ||||||| || ||||||||||||||||  |||||||||||||| | |||  |||| ||||||| ||||||| |||  ||||||||    
T  23359351 ggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggggcaaaa 23359435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 26879295 - 26879335
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  26879295 ttggcagttaactaccgaggttttcctcggcagttaactgc 26879335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 36908627 - 36908515
Alignment:
Q  46 cctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgt 145  Q
    ||||| ||||||||||||||| |||||||||||  ||| |||||||||| |||   |||||||| |||  ||||| || || |||  ||||||  |||||    
T  36908627 cctcggcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgt 36908528  T
Q  146 gtcaacaacaatt 158  Q
    ||||||| |||||    
T  36908527 gtcaacatcaatt 36908515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 3944045 - 3943998
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  3944045 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 3943998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 3993845 - 3993892
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  3993845 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 3993892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 8548671 - 8548718
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  8548671 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 8548718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 15051350 - 15051397
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  15051350 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 15051397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Original strand, 21944385 - 21944448
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagtta 90  Q
    ||||||| | |||||||||||||| ||  ||||||||||| |||||| ||||||||| ||||||    
T  21944385 agttaactatcgaggttttcctcggcaactaactgcagccggtttttaaatttctcgacagtta 21944448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 3728806 - 3728768
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  3728806 ggcagttaactaccgaggttttcctcggcagttaactgc 3728768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 9618706 - 9618656
Alignment:
Q  111 gtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||| || | |  |||||||||||||||||||||||||||||    
T  9618706 gtaaattactcgtgtgacacagccttatgcaatgtgtcaacaacaattctc 9618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 19054252 - 19054294
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||| | |||||||||||||||    
T  19054252 ggcagttaactaccgaggttttccttggcagttaactgcagcc 19054294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 19161963 - 19161921
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    ||||||||||  ||||||||||||||| |||||||||||||||    
T  19161963 ggcagttaactcccgaggttttcctcggcagttaactgcagcc 19161921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 38119614 - 38119660
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    ||||||||| |||||||||||||||| ||||||||||| || |||||    
T  38119614 gcagttaactaccgaggttttcctcggcagttaactgccgctagttt 38119660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 46216469 - 46216427
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||    
T  46216469 ggcagttaactaccgaagttttcctcgatagttaactgcagcc 46216427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 50617276 - 50617234
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    ||||||||||  ||||||||||||| |||||||||||||||||    
T  50617276 ggcagttaactcccgaggttttccttgacagttaactgcagcc 50617234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 51289962 - 51290032
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||| |||| |||||||||||||||| |||||||||||| || | |||| |||| ||| | |||||||||    
T  51289962 ggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactg 51290032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 1872087 - 1872042
Alignment:
Q  116 ttactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||| || |||  |||||||||||||||||||||||||||||    
T  1872087 ttactcgtgtgcctcagccttatgcaatgtgtcaacaacaattctc 1872042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 19495120 - 19495063
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    ||||| |||| ||||||||||||||| | |||||||||||| |  |||||||||||||    
T  19495120 gtttttctcggcagttaactgcagccggattttgaatttcttgatagttaactgtcga 19495063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 23272892 - 23272783
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    ||||||||||||||  | | || |||| ||||||||||||||| |||  ||  |||||||||  |||||||||| ||||  ||||||  ||||| | |||    
T  23272892 cagttaactgcagctggatatttaattcctcggcagttaactggcgaggggaaaaaaacgtattttactcgtatttctcatccttatcaaatgtatgaac 23272793  T
Q  152 aacaattctc 161  Q
    ||||||||||    
T  23272792 aacaattctc 23272783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Original strand, 27115842 - 27115895
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||| ||| ||||||||||||||| |||||| |||| ||||||| |||||||    
T  27115842 gttttcttcggcagttaactgcagccggtttttaaattcctcggcaattaactg 27115895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 29424451 - 29424402
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttttt 73  Q
    |||||||||| ||||| ||||||||||  |||||||||||||| ||||||    
T  29424451 ggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 29424402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 35527036 - 35527141
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatg 144  Q
    ||||| |||||||||||||||| |||||||| ||  |||||| ||||||| | |   ||||||||||||  ||||| || || |||  ||||||| ||||    
T  35527036 tcctctacagttaactgcagcctgtttttgatttcttcggcaattaactgccaagaaggcaaaaacgtattttacttgtgtgcctcagccttatgaaatg 35527135  T
Q  145 tgtcaa 150  Q
    ||||||    
T  35527136 tgtcaa 35527141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 3e-35; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 41497550 - 41497406
Alignment:
Q  17 attttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaat 116  Q
    ||||||||| ||||||| |||||||||||||||| || |||||||||||| |||||||||||  ||||||||||| ||||||   |||||||||||||||    
T  41497550 attttttggtagttaactaccgaggttttcctcggcaattaactgcagccggtttttgaattcttcggcagttaagtgtcgaggtggcaaaaacgtaaat 41497451  T
Q  117 tactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||| || |||  |||||||||||||||||| | ||||||||    
T  41497450 tactcgtgtgcctcagccttatgcaatgtgtcaagagcaattctc 41497406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 35493338 - 35493480
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| |||||  ||||||||| ||||||||||||||  ||||||||||| ||||||||||||||  |||  |||||||| ||||  |||    
T  35493338 ttttcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtatttta 35493437  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  35493438 ctcgtgtgtctcaaccttatgcaatgtgtcaacaacaattctc 35493480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 45475508 - 45475377
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatg 126  Q
    ||||||| |||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| |||  |||||||| ||||  ||||| || ||    
T  45475508 agttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttacttgtgtg 45475409  T
Q  127 tctccaccttatgcaatgtgtcaacaacaatt 158  Q
    ||||  ||||||| |||||||||||| |||||    
T  45475408 tctcagccttatgaaatgtgtcaacatcaatt 45475377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 28342594 - 28342460
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||| ||  |||||||| ||||||| ||||||| |||||||||||  ||| |||||||||| |||| ||||||||||||||||||||  |    
T  28342594 ggcagttaactaccaagaatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaattacttat 28342495  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     |||||   ||||||||||||||||||||||||||    
T  28342494 gtgtcttagccttatgcaatgtgtcaacaacaatt 28342460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 25184832 - 25184968
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||||||||||||| ||||   |||| |||| ||||||||||  ||  |||||||||||||  ||||||||    
T  25184832 ggcagttaactaccgaggttttcctcggcagttaactgcagccggtttca-aattcctcgacagttaactgctgagggggcaaaaacgtattttactcgt 25184930  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || ||| |||||||||||| |||||||||||||||||    
T  25184931 gtgcctcaaccttatgcaatctgtcaacaacaattctc 25184968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 2917752 - 2917620
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| || ||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||| |||  |||||||||||||  |||||  | |    
T  2917752 cagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgt 2917653  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    | |||  ||||||| ||||||||||||||||||    
T  2917652 gcctcagccttatgaaatgtgtcaacaacaatt 2917620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 34921761 - 34921886
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||  ||   |||||||||||||  ||||||||    
T  34921761 ggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaactaccg-gggggcaaaaacgtattttactcgt 34921859  T
Q  124 atgtctccaccttatgcaatgtgtcaa 150  Q
     | ||||  ||||||| ||||||||||    
T  34921860 gtttctctgccttatgaaatgtgtcaa 34921886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 9660057 - 9660194
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||| ||||| ||| |||||||||||| |||| |||||||||| ||| ||| ||| ||||||||||||||| |||  ||||||||| |||||||||||||    
T  9660057 ggcaattaactaccaaggttttcctcggcagtcaactgcagccggttattgtattcctcggcagttaactgccgagagggcaaaaaagtaaattactcgt 9660156  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     |  |||  | |||||||||||||||||| ||||||||    
T  9660157 gtacctcagctttatgcaatgtgtcaacagcaattctc 9660194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 41181491 - 41181371
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||| ||||||| || |||| ||| ||||||| ||||||||||||||| |||  |||||||||||||  |||||||| || |||  ||||||||    
T  41181491 gttttcctcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatgc 41181392  T
Q  141 aatgtgtcaacaacaattctc 161  Q
    |||||||||||| ||||||||    
T  41181391 aatgtgtcaacatcaattctc 41181371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 19187225 - 19187359
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||| |||||||| |  | ||||||||||||||||||||||||| |||  |||||||||||||  ||||| ||    
T  19187225 ggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttacttgt 19187324  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     ||||||  |||||||  |||| | ||||||||||    
T  19187325 gtgtctcagccttatgatatgtctgaacaacaatt 19187359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 35490751 - 35490625
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||| |||||||| ||  ||||||||||||||| |||||||||||  |||||||||||| |||||   |||||||| |||  ||||||||    
T  35490751 ggcagttaactaccaaggttttcttcagcagttaactgcagccggtttttgaattcttcggcagttaaccgtcgaggaggcaaaaatgtattttactcgt 35490652  T
Q  124 atgtctccaccttatgcaatgtgtcaa 150  Q
     ||||||  ||||||||||||||||||    
T  35490651 gtgtctcagccttatgcaatgtgtcaa 35490625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 41053690 - 41053807
Alignment:
Q  44 ttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaat 143  Q
    ||||||| ||||||||||||||| |||| | ||||||| | ||||||||||||||   |||||||||||||||||||||  || |||  ||||||| |||    
T  41053690 ttcctcgccagttaactgcagccggtttcttaatttctggacagttaactgtcgaggaggcaaaaacgtaaattactcgcgtgcctcagccttatgtaat 41053789  T
Q  144 gtgtcaacaacaattctc 161  Q
    ||||||||| ||||||||    
T  41053790 gtgtcaacagcaattctc 41053807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 24601710 - 24601611
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| | ||||||||  ||||||||||||||||||||| |||| |||| |||||||||  |||||||| |||||| ||||||||||||    
T  24601710 ggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaatgggaaaaaacataaattactcgt 24601611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 24612404 - 24612503
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| | ||||||||  ||||||||||||||||||||| |||| |||| |||||||||  |||||||| |||||| ||||||||||||    
T  24612404 ggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaatgggaaaaaacataaattactcgt 24612503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 24607589 - 24607707
Alignment:
Q  43 tttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaa 142  Q
    |||||||| ||||||||||||||| |||||| || |  ||||||||||||||  ||  ||| |||||||||||||||  || || |||  ||||||||||    
T  24607589 tttcctcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgagggggaaaaaacgtaaattacctgtgtgcctcagccttatgcaa 24607688  T
Q  143 tgtgtcaacaacaattctc 161  Q
    |||||||||||||||||||    
T  24607689 tgtgtcaacaacaattctc 24607707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 12908431 - 12908508
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatg 101  Q
    |||||||||| | | |||||||||||| |||||||||||||||| ||||||||||||||| |||||||||| ||||||    
T  12908431 ggcagttaactatcaaggttttcctcggcagttaactgcagccaatttttgaatttctcgacagttaactgccgaatg 12908508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 19 - 107
Target Start/End: Original strand, 23409498 - 23409586
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaa 107  Q
    |||| ||||||| ||  ||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||  |||||||    
T  23409498 ttttcggcagtttacttccgaggttttcctcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaa 23409586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 29397981 - 29397882
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  ||||||||||||||| ||||||||||||| | | |||  |||||||| ||| |||||||||||  ||||||||| |||||||||||||    
T  29397981 ggcagttaactcccgaggttttcctcggcagttaactgcagtcggatttctaatttctcagcaattaactgtcgatagggcaaaaaagtaaattactcgt 29397882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 23346851 - 23346715
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||| | ||||||||||||||| | |||  ||    |||||||||||||| |||| |||||||||||| | ||||||||    
T  23346851 ggcagttaactaccgaggttttccttggcagttaactgcagccggatttataaaacttcggcagttaactgccgaa-gggcaaaaacgtcatttactcgt 23346753  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||  ||||||| |||||||||||||    
T  23346752 gtggcacaaccttatcaaatgtgtaaacaacaattctc 23346715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 41008930 - 41009066
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||||||| ||||||| ||||||| |||    |||| ||||||||||||||| |||   ||||||||||||||||||||||    
T  41008930 ggcagttaactaccgaagttttcctcggcagttaaatgcagccggttaca-aattcctcggcagttaactgccgaggaggcaaaaacgtaaattactcgt 41009028  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     ||||||   |||||  ||||||||||  |||||||||    
T  41009029 gtgtctcggtcttatcaaatgtgtcaatgacaattctc 41009066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 41500236 - 41500373
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||||||| |||| ||||||||||||||| | |||||||||  | |  ||||||||| |||  |||||||| ||||  ||||||||    
T  41500236 ggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattctttgatagttaactgccgagggggcaaaagcgtattttactcgt 41500335  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||  || |||| |||||||||||| ||||||||    
T  41500336 gtttctcagccatatgaaatgtgtcaacatcaattctc 41500373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 38 - 158
Target Start/End: Complemental strand, 19186804 - 19186684
Alignment:
Q  38 gaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacctta 137  Q
    |||||||||||   |||||||||||||||  |||||||||| |||||||||| |||| |||  ||| |||||||||  ||||| || ||||||  |||||    
T  19186804 gaggttttccttagcagttaactgcagccgctttttgaattgctcggcagtttactgccgatggggtaaaaacgtattttacttgtgtgtctcagcctta 19186705  T
Q  138 tgcaatgtgtcaacaacaatt 158  Q
    ||  |||||||||||||||||    
T  19186704 tgatatgtgtcaacaacaatt 19186684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 120
Target Start/End: Original strand, 34639316 - 34639412
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattact 120  Q
    ||||||||||  |||| |||||||||  ||||||||||||||| | |||| |||||||||||||||| ||| |||  ||||||||| ||||||||||    
T  34639316 ggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaaagtaaattact 34639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Complemental strand, 41004599 - 41004464
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||  ||| ||||||||||||||| |||    |||| ||||||||||||||| |||    |||||||||||||||||||||    
T  41004599 ggcagttaactaccgaagtttttttcggcagttaactgcagccggttaca-aattcctcggcagttaactgccgaggaagcaaaaacgtaaattactcgt 41004501  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattct 160  Q
    |||  ||  |||||| ||||||||||||||| |||||    
T  41004500 atgcatcagccttatacaatgtgtcaacaacgattct 41004464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 43491180 - 43491109
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgt 95  Q
    |||||||||| ||| |||||||||||||||||||| ||||||| ||| || |||| ||||||||||||||||    
T  43491180 ggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggcagttaactgt 43491109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 7189953 - 7190089
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||||||| ||||||||||||||| | |||  ||    |||||||||||||| || | |||||||||||||| ||||||||    
T  7189953 ggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccg-aggggcaaaaacgtaatttactcgt 7190051  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||| ||||||  |||| ||||||||    
T  7190052 gtggcacaaccttatgtaatgtgggaacatcaattctc 7190089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 29093830 - 29093971
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-----tttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    ||||||||||  || |||||||||||| || |||||||||| |||     ||||| ||||| ||||||||||||||||||  ||||||||  ||||||||    
T  29093830 ggcagttaactgccaaggttttcctcggcaattaactgcagtcagccggatttttaaatttatcggcagttaactgtcgagggggcaaaagagtaaatta 29093929  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattct 160  Q
    ||||| || | |  ||||||| ||||||  ||||||||||||    
T  29093930 ctcgtgtgccacagccttatgtaatgtgggaacaacaattct 29093971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 157
Target Start/End: Original strand, 82265 - 82396
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    ||||||||| || ||||||||||||||||||||||||||||| | |||  |||| |||| |||||||||  |||     ||||||||||  ||||||||     
T  82265 gcagttaactacggaggttttcctcgacagttaactgcagcc-ggtttcaaattactcgacagttaactaccgaggaaacaaaaacgtattttactcgtg 82363  T
Q  125 tgtctccaccttatgcaatgtgtcaacaacaat 157  Q
    || |   ||||||||||||||||||||||||||    
T  82364 tgacataaccttatgcaatgtgtcaacaacaat 82396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 435413 - 435280
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||| ||| | ||||||||||||||  |||| ||||||||| | |||  ||||  |||||||||||||| | |  |||||||||||||||||||||||    
T  435413 ggcagtcaactatcgaggttttcctcggtagtttactgcagcc-gatttcaaattcatcggcagttaactgccaagggggcaaaaacgtaaattactcgt 435315  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||   ||||| || ||||||||||||||||    
T  435314 gtgcctcagtcttatacagtgtgtcaacaacaatt 435280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 43943760 - 43943690
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||| ||||||||||||||||||||||||| ||| || |||| ||||  |||||||||    
T  43943760 ggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcgagagttaactg 43943690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 16580552 - 16580479
Alignment:
Q  88 ttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||||||   |||||||| |||  |||||||| ||||||  |||||||||||||||||||||||||||||    
T  16580552 ttaactgtcgaggaggcaaaaatgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaattctc 16580479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 24512238 - 24512101
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||  ||| || |||||||||||  |||||| |||| |||  ||||||||||||||  ||| |||||||||  ||||| ||    
T  24512238 ggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaattcctcaacagttaactgtcgagggggtaaaaacgtattttacttgt 24512139  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||  || |||| |||||||||| | ||||||||    
T  24512138 gtttctcagccatatgaaatgtgtcaagagcaattctc 24512101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 2648852 - 2648780
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    ||||||||||  |||||||||||||| ||||||||||| || |||||||||||| |||  |||||||| ||||    
T  2648852 gttttcctcggtagttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaagcgta 2648780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28477067 - 28477111
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||||| |||||||||||||||| |||||||||||||||    
T  28477067 ttggcagttaactaccgaggttttcctcggcagttaactgcagcc 28477111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 161
Target Start/End: Complemental strand, 1149532 - 1149406
Alignment:
Q  35 accgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacc 134  Q
    |||||||||||||||||||||||||||||  | | |||  |||| ||||||||||||||| |||  | |||||| ||||  ||||| || || | | |||    
T  1149532 accgaggttttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttactagtgtggcacaacc 1149433  T
Q  135 ttatgcaatgtgtcaacaacaattctc 161  Q
    ||||  ||||||  |||||||||||||    
T  1149432 ttatcaaatgtgggaacaacaattctc 1149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 14181836 - 14181894
Alignment:
Q  36 ccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||||| || ||||||||||||| | ||||||||||| || ||||||||||||    
T  14181836 ccgaggttttccacggcagttaactgcagacggtttttgaattccttggcagttaactg 14181894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 17424203 - 17424161
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  17424203 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 17424161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 17911243 - 17911169
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||  | |||||||||||||  | |||||||||||| ||||| || || ||||||||||||||||||||    
T  17911243 gcagttaactgctgaggttttcctcggtaattaactgcagccggttttggacttcctcggcagttaactgtcgaa 17911169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 42177216 - 42177286
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| |||||||| |  ||||||| |||||| |||| |||||| |||||||||||||||    
T  42177216 ggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagttaactg 42177286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 43982270 - 43982228
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  43982270 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 43982228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 152
Target Start/End: Complemental strand, 12905597 - 12905492
Alignment:
Q  47 ctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtg 146  Q
    |||| |||||||||||||||  ||||| |||||||||||||||||||| |||  ||  |||| ||||  |||||| | | ||||  ||||||| ||||||    
T  12905597 ctcggcagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgtattttactcttgtttctcagccttatgaaatgtg 12905498  T
Q  147 tcaaca 152  Q
    ||||||    
T  12905497 tcaaca 12905492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 41052696 - 41052615
Alignment:
Q  80 ctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||| ||||||| |||  || ||||||||||||||||| || ||  ||  ||||||||||| |||||||||||||||||    
T  41052696 ctcggcaattaactgccgaggggacaaaaacgtaaattacttgtgtgcatcagccttatgcaatatgtcaacaacaattctc 41052615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 14456570 - 14456503
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||  ||||||||||||||| ||||||||||||||| |||||    || |||||||||||||||    
T  14456570 agttaactgccgaggttttcctcggcagttaactgcagccggttttatttttgctcggcagttaactg 14456503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 22003403 - 22003450
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  22003403 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 22003450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 25964877 - 25964822
Alignment:
Q  29 ttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcgg 84  Q
    ||||| |||||||||||||||| ||||||||||||||| | |||| |||| |||||    
T  25964877 ttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcgg 25964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 28468712 - 28468665
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  28468712 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 28468665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 41183226 - 41183273
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| ||||||||||||||||  |||||||||||||| ||||    
T  41183226 ggcagttaactaccgaggttttcctcggtagttaactgcagccggttt 41183273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 3795408 - 3795338
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||  || |||||||||||| ||||||||||||||| | |||  |||| |||| ||||||||||    
T  3795408 ggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactg 3795338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 3943194 - 3943236
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||||||||| |||| |||||||||||||||    
T  3943194 ggcagttaactaccgaggtttttctcggcagttaactgcagcc 3943236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 27276388 - 27276446
Alignment:
Q  36 ccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||||||| ||||||||||||||| | |||  |||| ||| |||||||||||    
T  27276388 ccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactg 27276446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 40156470 - 40156396
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    ||||||||||   ||| |||||||||| ||||||||||||||| |||||| ||  | |||||| |||||||||||    
T  40156470 ggcagttaactgtcgaagttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactgtcga 40156396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 43950263 - 43950380
Alignment:
Q  43 tttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaa 142  Q
    |||||||| ||||||| ||||| | ||||| ||||| | | ||||||||||| |||  ||||||||| |||  |||||||| | ||||  ||||||  ||    
T  43950263 tttcctcggcagttaattgcagtcggtttt-gaattccacagcagttaactgccgagggggcaaaaatgtattttactcgtgtttctcagccttatcaaa 43950361  T
Q  143 tgtgtcaacaacaattctc 161  Q
    ||||||||||||| |||||    
T  43950362 tgtgtcaacaacagttctc 43950380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 2271739 - 2271780
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagc 65  Q
    ||||||||||  |||| |||||||||||||||||||||||||    
T  2271739 ggcagttaactgccgaagttttcctcgacagttaactgcagc 2271780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 161
Target Start/End: Original strand, 15488252 - 15488281
Alignment:
Q  132 accttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||||||||||||||||||    
T  15488252 accttatgcaatgtgtcaacaacaattctc 15488281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 18000301 - 18000256
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  18000301 cagttaactaccgaggttttcctcggcagttaactgccgccggttt 18000256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 24541805 - 24541732
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    ||||||||  ||||||||||| |||  ||||||||| |||||||||| || || ||| ||||||||||| ||||    
T  24541805 cagttaactgccgaggttttcttcggaagttaactgaagccagttttagacttcctctgcagttaactgccgaa 24541732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 41564492 - 41564541
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    ||||| |||||| |||||||||||||||| ||||||||||| ||| ||||    
T  41564492 ttggccgttaactaccgaggttttcctcggcagttaactgccgccggttt 41564541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 43536173 - 43536136
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactg 61  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  43536173 ggcagttaactaccgaggttttcctcggcagttaactg 43536136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 45479841 - 45479930
Alignment:
Q  69 tttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    ||||| |||||||||||||||||||| |||  | |||||| ||||  |||||| | | |||   ||||||| ||||||||||||||||||    
T  45479841 ttttttaatttctcggcagttaactgccgagagagcaaaatcgtattttactcatgtttctgagccttatgaaatgtgtcaacaacaatt 45479930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 3e-32; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 34622572 - 34622433
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactc 121  Q
    ||||| |||||| ||||||| |||||||||||||||||||||| | |||| | |||| ||| ||||||||||||| |  ||||||||||||||||||||     
T  34622572 ttggctgttaactaccgaggatttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattactt 34622473  T
Q  122 gtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || || |||  |||||||||||||||||||||||||||||    
T  34622472 gtgtgcctcagccttatgcaatgtgtcaacaacaattctc 34622433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 34623380 - 34623519
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactc 121  Q
    ||||| |||||| ||||||| |||||||| |||||||||||||||  | | | |||| ||||||||||||||| |||   ||||||||||||||||||||    
T  34623380 ttggctgttaactaccgaggatttcctcggcagttaactgcagccgatctcttaattcctcggcagttaactgccgatgaggcaaaaacgtaaattactc 34623479  T
Q  122 gtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || |||||| |||||||||||| |||||||| ||||||||    
T  34623480 gtgtgtctcaaccttatgcaatatgtcaacagcaattctc 34623519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 48314749 - 48314608
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    ||||||||||||||  |||||||||||| |||  |||||||||||||| ||| ||||||| ||||||||||||||| || | ||||||||| |||  |||    
T  48314749 tttttggcagttaagtaccgaggttttcgtcggtagttaactgcagccggttattgaattcctcggcagttaactgccg-aggggcaaaaatgtatttta 48314651  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || || |  ||| ||||||||||||||||||||||||||||||    
T  48314650 cttgtgtacctcaaccttatgcaatgtgtcaacaacaattctc 48314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 46863374 - 46863483
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||  |||||||||||||  ||||| || ||||||  |||||||||||| ||||||    
T  46863374 cagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaac 46863473  T
Q  152 aacaattctc 161  Q
    ||||||||||    
T  46863474 aacaattctc 46863483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 47776403 - 47776266
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||  |||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| ||||  ||||||||    
T  47776403 ggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtattttactcgt 47776304  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||  ||||||  ||||||  |||| ||||||||    
T  47776303 gtttctcagccttatcaaatgtgggaacatcaattctc 47776266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 28980174 - 28980312
Alignment:
Q  24 ggcagttaacaaccgaggttttcct-cgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcg 122  Q
    |||||||||| |||||||||||||| || |||||||||||| || | | |||||||  ||||||| ||||||  ||  |||||||||||||  |||||||    
T  28980174 ggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaattcttcggcagctaactgctgagggggcaaaaacgtattttactcg 28980273  T
Q  123 tatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | ||||||  |||||||||||||||||||||||||||||    
T  28980274 tgtgtctcagccttatgcaatgtgtcaacaacaattctc 28980312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 47060997 - 47060861
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||| |||| |||||||||| |||  |||||||||||||  ||||| ||    
T  47060997 ggcagttaactaccgaggttttcctcggcagttaactacagcc-gattttgaattcctcgacagttaactgccgagggggcaaaaacgtattttacttgt 47060899  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||| |||  ||||||| ||| ||||||||| |||||||    
T  47060898 atgcctcagccttatgaaatatgtcaacaataattctc 47060861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 30355241 - 30355378
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| |||||||||||||||  ||||||||||  || ||| ||||||| |||  |||||||| ||||  ||||||||    
T  30355241 ggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcgtattttactcgt 30355340  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||   | |||| |||||||||||||||||||||    
T  30355341 gtttctcagtcatatgaaatgtgtcaacaacaattctc 30355378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Original strand, 9494810 - 9494942
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    ||||||||  ||||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||||| |||  ||||| | || ||  ||||| || |    
T  9494810 cagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttacttgtgt 9494909  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    | |||  ||||||| ||||||||||||||||||    
T  9494910 gcctcagccttatgaaatgtgtcaacaacaatt 9494942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 37340373 - 37340284
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    |||||||||| ||||||||||| |||| |||||||||||| || ||||||||||| |||| |||||||||||||||  | ||||||||||    
T  37340373 ggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgta 37340284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 38 - 161
Target Start/End: Complemental strand, 36392182 - 36392059
Alignment:
Q  38 gaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacctta 137  Q
    ||||||||||||| |||||||| ||| ||  |||||||||| |||  ||||||||||||||  |||||||||||||  ||||| || || ||   |||||    
T  36392182 gaggttttcctcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtgtgcctaagcctta 36392083  T
Q  138 tgcaatgtgtcaacaacaattctc 161  Q
    || |||||||||||||||||||||    
T  36392082 tgtaatgtgtcaacaacaattctc 36392059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 19044364 - 19044228
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||||||| || |||||||||| | ||||   |||| ||||||| ||||||| ||| ||  ||||||||||  |||||| |    
T  19044364 ggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtattttactcat 19044266  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  ||||||||||||||||||||| |||||||    
T  19044265 gtgcctcagccttatgcaatgtgtcaacaataattctc 19044228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 20710272 - 20710408
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||||||| || |||||||||| | ||||   |||| ||||||| ||||||| ||| ||  ||||||||||  |||||| |    
T  20710272 ggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtattttactcat 20710370  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  ||||||||||||||||||||| |||||||    
T  20710371 gtgcctcagccttatgcaatgtgtcaacaataattctc 20710408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 158
Target Start/End: Original strand, 36186492 - 36186608
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||| |||||||||||| || ||||  ||||| ||||||| ||||||| |||  |||||||| ||||  |||||||| || | |  ||||||||    
T  36186492 gttttcctcggcagttaactgcaaccggtttc-gaattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagccttatgc 36186590  T
Q  141 aatgtgtcaacaacaatt 158  Q
    ||||||||||||||||||    
T  36186591 aatgtgtcaacaacaatt 36186608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 42499480 - 42499391
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    |||||||||| |||||||||||||||| ||||||||||||| | | |||  |||| ||||||| |||||||||||| ||| |||| ||||    
T  42499480 ggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttcaaattcctcggcaattaactgtcgaaggggtaaaatcgta 42499391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 42808663 - 42808614
Alignment:
Q  170 tttctagtttgcagcattaaaacttgtgaccctcaaattaattttctatt 219  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  42808663 tttctagtttgcagcaataaaacttgtgaccctcacattaattttctatt 42808614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 10705319 - 10705249
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||  || ||||||| |||| |||||||||||||||  ||||| ||||||||||||||||||||    
T  10705319 ggcagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactg 10705249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 45 - 95
Target Start/End: Original strand, 21188423 - 21188473
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgt 95  Q
    |||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  21188423 tcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgt 21188473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 42682065 - 42682007
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctc 82  Q
    |||||||||  |||||||||||||||| ||||||||||||||  |||||||||||||||    
T  42682065 ggcagttaattaccgaggttttcctcggcagttaactgcagctggtttttgaatttctc 42682007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 46860587 - 46860457
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| ||||||||||  ||||||||| |||| | |||||||||||| | |||||| |||| |||| |||||||||| |||  |||||||| ||||  |||    
T  46860587 ttttcggcagttaactgccgaggtttgcctcaatagttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtatttta 46860488  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtca 149  Q
    || || || |||  ||||||| |||||||||    
T  46860487 cttgtgtgcctcagccttatgtaatgtgtca 46860457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 21185662 - 21185553
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    ||||||||| ||||| ||| |||||||  |||||||||||||| |||   ||||||| ||||  |||||  | ||||||  | |||||||||||||||||    
T  21185662 cagttaactacagccggttattgaattcttcggcagttaactgccgaggaggcaaaatcgtattttacttatgtgtctcatcattatgcaatgtgtcaac 21185563  T
Q  152 aacaattctc 161  Q
    ||||||||||    
T  21185562 aacaattctc 21185553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 34742399 - 34742496
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||  ||||||||||||||| ||||||||||||| ||| |||  |||| |||| || ||||||| |||  | | |||||||||||||||||||    
T  34742399 cagttaacttccgaggttttcctcggcagttaactgcagtcagatttctaattcctcgacaattaactgccgagggagaaaaaacgtaaattactcgt 34742496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 46596903 - 46596830
Alignment:
Q  88 ttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||||||||||||||  |||||||| ||  ||  |||||||||||||||| ||| ||||||||    
T  46596903 ttaactgtcgaatgggcaaaaacgtattttactcgtgtgcgtcagccttatgcaatgtgtccacagcaattctc 46596830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 41049196 - 41049327
Alignment:
Q  29 ttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtc 128  Q
    ||||| |||||||||||||||| |||||||||||||||  || |||||||  ||| |||||||||  |||| |  ||||| ||||  |||||  | ||      
T  41049196 ttaactaccgaggttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaa-gaacaaaagcgtattttacttatgtgca 41049294  T
Q  129 tccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||  |||||||||||||||||||||||||||||    
T  41049295 tcagccttatgcaatgtgtcaacaacaattctc 41049327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 9367726 - 9367768
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  9367726 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 9367768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 34139947 - 34139869
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||| ||||||||||||||| | |||  ||||  ||||||||||| |  |||| |||||||||||||||||||||||    
T  34139947 tcctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgt 34139869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 158
Target Start/End: Complemental strand, 28112852 - 28112779
Alignment:
Q  85 cagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    |||||||||| |||  |||||||| ||||  ||||| || |||||| |||||||| ||||||||||||||||||    
T  28112852 cagttaactgccgagagggcaaaagcgtattttacttgtgtgtctcaaccttatgaaatgtgtcaacaacaatt 28112779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 17840892 - 17840932
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcag 64  Q
    |||||||||| |||||||||||||||| |||||||||||||    
T  17840892 ggcagttaactaccgaggttttcctcggcagttaactgcag 17840932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 27453615 - 27453679
Alignment:
Q  43 tttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaa 107  Q
    |||||||| ||||||||||||||| | |||| |||| ||||||||||||||| |||  |||||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaa 27453679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 68
Target Start/End: Complemental strand, 34738435 - 34738391
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag 68  Q
    |||||||||| |||||||||||||||| || ||||||||||||||    
T  34738435 ggcagttaactaccgaggttttcctcggcatttaactgcagccag 34738391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 40587732 - 40587692
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcag 64  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  40587732 ggcagttaactactgaggttttcctcgacagttaactgcag 40587692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 18105444 - 18105397
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  18105444 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 18105397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 30846812 - 30846871
Alignment:
Q  39 aggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    |||||||||||| ||||||||||||||| ||| || ||  | ||||||||||||||||||    
T  30846812 aggttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcga 30846871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 33603260 - 33603197
Alignment:
Q  36 ccgaggttttcctcgacagttaactgcagcc-agtttttgaatttctcggcagttaactgtcga 98  Q
    |||||||||||||||  ||||||||||| || | ||||||||||| ||||||||||||| ||||    
T  33603260 ccgaggttttcctcgggagttaactgcaaccgattttttgaatttgtcggcagttaactatcga 33603197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 38555407 - 38555490
Alignment:
Q  16 aattttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    ||||||| ||||||||||  |||| |||||||||| ||||||||||||||  ||| || ||  | |||||||||||||| ||||    
T  38555407 aatttttcggcagttaactgccgaagttttcctcggcagttaactgcagctggttctttaaaatttcggcagttaactgccgaa 38555490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 45767863 - 45767910
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  45767863 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 45767910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 161
Target Start/End: Original strand, 48316296 - 48316399
Alignment:
Q  58 actgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaat 157  Q
    ||||||||| ||| ||||| |  |||||||||||||||| |  |||||||||| ||  ||||| || ||||||  ||||||| |||||| |||||||||     
T  48316296 actgcagccggttattgaagtcttcggcagttaactgtcaagggggcaaaaacttattttacttgtgtgtctcagccttatgaaatgtgccaacaacaaa 48316395  T
Q  158 tctc 161  Q
    ||||    
T  48316396 tctc 48316399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Original strand, 11629764 - 11629810
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||  ||||||||||||||||||||||||||| ||| ||||    
T  11629764 gcagttaactgccgaggttttcctcgacagttaactgccgccggttt 11629810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 15070426 - 15070388
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  15070426 ggcagttaactaccgaggttttcctcggcagttaactgc 15070388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 35606860 - 35606822
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  35606860 ggcagttaactaccgaggttttcctcggcagttaactgc 35606822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 35839374 - 35839324
Alignment:
Q  111 gtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||||| || || | | ||||||||||||||||||||||||||||||    
T  35839374 gtaaattactagtgtgacacaaccttatgcaatgtgtcaacaacaattctc 35839324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 10098121 - 10098166
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    ||||||||  ||||||||||||||| ||||||||||||||| ||||    
T  10098121 cagttaactcccgaggttttcctcggcagttaactgcagccggttt 10098166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 15074232 - 15074277
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  15074232 cagttaactaccgaggttttcctcggcagttaactgccgccggttt 15074277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 21190654 - 21190727
Alignment:
Q  88 ttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||| |||  |||||||||||||  |||||||| | |||    ||||||||||||||||||||||||||||    
T  21190654 ttaactgccgagggggcaaaaacgtattttactcgtgtttcttagacttatgcaatgtgtcaacaacaattctc 21190727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 1e-31; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 3603145 - 3603287
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||||||||||||||||  |||||||||||||||||| |||||||  ||||||||||||||||||  | |||||||||||  |||    
T  3603145 ttttcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtatttta 3603244  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||  | || |||  |||||||||||||||||||||||||||||    
T  3603245 cttatgtgcctcagccttatgcaatgtgtcaacaacaattctc 3603287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 33993351 - 33993225
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||||||| | || ||||||||| ||||| |||||||||||| |||||||||||||  |||  |||||||||||||  ||||||||    
T  33993351 ggcagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtattttactcgt 33993252  T
Q  124 atgtctccaccttatgcaatgtgtcaa 150  Q
    || |||| |||||||| ||||||||||    
T  33993251 atttctcaaccttatgaaatgtgtcaa 33993225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 18307325 - 18307189
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||||||| |||||  ||||| |||| |||| |||||||||| |||| | |||||||||||  ||||||||    
T  18307325 ggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgacagttaactgccgaaggagcaaaaacgtattttactcgt 18307226  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || ||| || |||||| |||||||||||| ||||||||    
T  18307225 atttct-catcttatgaaatgtgtcaacatcaattctc 18307189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 4204213 - 4204308
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactc 121  Q
    |||||||||| |||||||||||||||||||||||||||||||  | |||  ||||||||| ||||||||||||||  |||||||||||||||||||||    
T  4204213 ggcagttaactaccgaggttttcctcgacagttaactgcagc--ggtttcaaatttctcgacagttaactgtcgagagggcaaaaacgtaaattactc 4204308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 1398673 - 1398541
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| |||||||||||||| | | |||||||||| || ||| ||||||| |||||||||||||||||||| | ||||||  |||  |||||  | |    
T  1398673 cagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtattttacttctgt 1398574  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    ||||| |||||||| ||||||||||||||||||    
T  1398573 gtctcaaccttatgtaatgtgtcaacaacaatt 1398541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 18538337 - 18538471
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||||||| ||||||||||||||| ||||||||||| |||| || ||||||| |||  |||||||| ||||  ||||| ||    
T  18538337 ggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttacttgt 18538436  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||| ||| ||||||||||||||||||    
T  18538437 gtgcctcagcctaatgaaatgtgtcaacaacaatt 18538471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 20200150 - 20200287
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| || || |||||||||| |||||||||||||   ||| |||||||||| | |||||||||| |||  |||||||||||||  ||| | ||    
T  20200150 ggcagttaactacagatgttttcctcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttatttgt 20200249  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  |||||||||||||||||||||||||||||    
T  20200250 gtgcctcagccttatgcaatgtgtcaacaacaattctc 20200287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 25877692 - 25877556
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||||||| ||||||| ||||||| ||||  ||||| ||||||| |||| || ||||  || |||||||||  ||||||||    
T  25877692 ggcagttaactaccgaagttttcctcggcagttaattgcagccggtttc-gaattcctcggcatttaattgccgaagtggtaaaaacgtattttactcgt 25877594  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | ||||||||||||||||||||||||||||||    
T  25877593 gtgacacaaccttatgcaatgtgtcaacaacaattctc 25877556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 30354400 - 30354465
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaa 91  Q
    |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  30354400 cagttaactaccgaggttttcctcgacagttaactgcaaccagtttttgaatttctcgacagttaa 30354465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 60 - 161
Target Start/End: Complemental strand, 7796696 - 7796595
Alignment:
Q  60 tgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattc 159  Q
    ||||||| ||||||||||| |||||||| |||||| | |  ||||||||||||||||||||||| || |||  ||| |||||||||||||||| ||||||    
T  7796696 tgcagccggtttttgaattactcggcagataactgccaagggggcaaaaacgtaaattactcgtgtgcctcagcctaatgcaatgtgtcaacatcaattc 7796597  T
Q  160 tc 161  Q
    ||    
T  7796596 tc 7796595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 20192424 - 20192287
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||| ||||| | ||| |||||||||| |||||||||||||||  || |||||||  || ||||||||||| |||| |||||||| ||||  ||||| ||    
T  20192424 ggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagcagttaactgacgaaggggcaaaatcgtattttacttgt 20192325  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  ||||||| |||||||||||||||||||||    
T  20192324 gtgcctcagccttatgaaatgtgtcaacaacaattctc 20192287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 25 - 160
Target Start/End: Original strand, 7800990 - 7801125
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    ||||||||| ||||| | ||||||||  | ||||||||||||  |||||||||| | || |||||||||  ||| ||| ||||||||||||||| ||||     
T  7800990 gcagttaactaccgatgatttcctcggtaattaactgcagccgatttttgaattccacgacagttaactaccgagtggacaaaaacgtaaattattcgtg 7801089  T
Q  125 tgtctccaccttatgcaatgtgtcaacaacaattct 160  Q
    |||||   |||||||||||||||||| | |||||||    
T  7801090 tgtcttatccttatgcaatgtgtcaaaagcaattct 7801125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 27 - 158
Target Start/End: Complemental strand, 34682325 - 34682194
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatg 126  Q
    |||||||  ||||||||||||||| ||||||||||||||| ||||||||||| |||| |||||||||||| |  | |||||| ||||  ||||| ||       
T  34682325 agttaactcccgaggttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttacttgtgaa 34682226  T
Q  127 tctccaccttatgcaatgtgtcaacaacaatt 158  Q
     |||  ||||||| ||||||||||||||||||    
T  34682225 cctcagccttatgaaatgtgtcaacaacaatt 34682194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 41201797 - 41201662
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| ||||||| |||| || |||| ||||||  || ||||| ||||  |||||||| |    
T  41201797 cagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcgacaattaattgtcgagaggacaaaatcgtattttactcgtgt 41201698  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | |||  ||||||| |||||||| ||  ||||||||    
T  41201697 gcctcagccttatgtaatgtgtcgacggcaattctc 41201662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 33995150 - 33995224
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    ||||||||||  ||||||||||||||| ||||||| |||| ||  ||||||||||||||||||||||||||||||    
T  33995150 ggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcga 33995224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 28388521 - 28388658
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||||||||||||  | |||  |||| |||||||| |||||| |||  ||||||||  ||||| |||||||    
T  28388521 ggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaagagtaaaatactcgt 28388620  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  ||||||| || |||| |||||||||||||    
T  28388621 gtggcacagccttatgtaaagtgtaaacaacaattctc 28388658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 34122595 - 34122506
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| | |||  |||| ||||||||||||||| |||| |||||||| ||||    
T  34122595 ggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgta 34122506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 8702202 - 8702274
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    |||||||| |||||||||||||||  ||||||||||||| ||| |||| |||| |||||||||||||||||||    
T  8702202 cagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactgtcga 8702274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 34123937 - 34124073
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||| | ||||||||||||||| | |||  ||||||||| |||||||||| |||  |||||||| ||||  ||||| ||    
T  34123937 ggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttactggt 34124036  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattct 160  Q
     || | | |||||||  ||||||  ||||||||||||    
T  34124037 gtggcacaaccttattaaatgtgggaacaacaattct 34124073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 41799770 - 41799906
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    |||||||||  |||| |||||| ||| |||||||||||||| || |||  |||| ||| |||||||||||||||  ||||||||| |||||||||||||     
T  41799770 gcagttaacttccgaagttttcatcggcagttaactgcagctagatttctaattcctcagcagttaactgtcgagggggcaaaaaagtaaattactcgtg 41799869  T
Q  125 tgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||| |   |||||  ||||||  |||||||||||||    
T  41799870 tgtcacagtcttatcaaatgtgggaacaacaattctc 41799906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 161
Target Start/End: Original strand, 18310051 - 18310160
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    ||||||||||||| | ||| ||||||| |||| ||||||||||  ||   ||||||||||||  ||||| || || |||  |||||||||||||||||||    
T  18310051 cagttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaac 18310150  T
Q  152 aacaattctc 161  Q
    ||||||||||    
T  18310151 aacaattctc 18310160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 25 - 161
Target Start/End: Original strand, 17966889 - 17967025
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    ||||||||| |||||| |||||||||  |||||||||||| | | |||| |||||||||||||||||||| |||  ||| |||| ||||  ||||| ||     
T  17966889 gcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtattttactagtg 17966988  T
Q  125 tgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | ||||  ||||||  ||||||  |||||||||||||    
T  17966989 tttctcagccttatcaaatgtgggaacaacaattctc 17967025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 7757396 - 7757297
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | |||||||||||||| ||||||||||||||| | |||  ||    ||||||||||||||||||  |||||||||||| | ||||||||    
T  7757396 ggcagttaactagcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagggggcaaaaacgtcatttactcgt 7757297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 161
Target Start/End: Original strand, 13568095 - 13568214
Alignment:
Q  42 ttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgca 141  Q
    ||||||||| ||||||||||||||| | |||  |||| ||||||||||||||  |||  ||| |||||||| | ||||||||||| | |  ||||||| |    
T  13568095 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgatggggtaaaaacgtcatttactcgtatggcacagccttatgta 13568194  T
Q  142 atgtgtcaacaacaattctc 161  Q
    |||||  |||||||||||||    
T  13568195 atgtgggaacaacaattctc 13568214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 25497582 - 25497523
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcg 83  Q
    |||||||||| |||||| ||||||||| |||||||||||||||| |||||||||| ||||    
T  25497582 ggcagttaactaccgagattttcctcggcagttaactgcagccaatttttgaattcctcg 25497523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 3600404 - 3600270
Alignment:
Q  28 gttaacaaccgaggttttcctcgacagttaactgcagccagtttttg-aatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatg 126  Q
    |||||| | |||||||||||| | ||||||||||||||  ||| ||  ||||  |||||||||||||| |||  |||||||||| ||  ||||| || ||    
T  3600404 gttaactatcgaggttttccttggcagttaactgcagctggttattataattattcggcagttaactgccgagggggcaaaaacatattttacttgtgtg 3600305  T
Q  127 tctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     ||| || ||||| |||||||||||||||||||||    
T  3600304 gctcaactttatgaaatgtgtcaacaacaattctc 3600270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 27532619 - 27532693
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    ||||||||||  |||||||||||||||| |||||||||||| |||||||    || |||||||||||||||||||    
T  27532619 ggcagttaactgccgaggttttcctcgatagttaactgcagtcagttttatttttcctcggcagttaactgtcga 27532693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 158
Target Start/End: Original strand, 1397371 - 1397486
Alignment:
Q  43 tttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaa 142  Q
    |||| ||| ||||||||||||||| | |||  |||| ||| ||||||||||| |||  ||||||||| ||||||||||||| || | | |||||||  ||    
T  1397371 tttcatcggcagttaactgcagccggatttctaattcctcagcagttaactgccgagggggcaaaaatgtaaattactcgtgtgccacaaccttatcaaa 1397470  T
Q  143 tgtgtcaacaacaatt 158  Q
    ||||  ||||||||||    
T  1397471 tgtgggaacaacaatt 1397486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 30192563 - 30192488
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    ||||||||||  |||| |||||||||||||||||||||||||| ||| || ||  | |||||||||||||| ||||    
T  30192563 ggcagttaactgccgaagttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccgaa 30192488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 42098371 - 42098304
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||    || |||||||||||||||    
T  42098371 agttaaccgccgaggttttcctcggcagttaactgcagccagttttatttttcctcggcagttaactg 42098304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 7017583 - 7017509
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    |||||||||| |||||||||||||| || |||||||||||||| | |||  |||| ||| |||||||||| ||||    
T  7017583 ggcagttaactaccgaggttttccttgagagttaactgcagccggatttcaaattcctcagcagttaactatcga 7017509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 19037472 - 19037514
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  19037472 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 19037514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 98
Target Start/End: Complemental strand, 28387340 - 28387266
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    |||||||||| ||||||| |||||||| || |||||||||||| |  ||  |||| |||||||||||||||||||    
T  28387340 ggcagttaactaccgaggatttcctcggcaattaactgcagccggaattcaaattcctcggcagttaactgtcga 28387266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 31094616 - 31094497
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcgg-cagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatg 139  Q
    |||||| ||| ||||||||||||||| ||||   |||||| | | |||||||||  |||  ||||||||| ||||||||||||| || ||   |||||||    
T  31094616 gttttcttcggcagttaactgcagccggtttc--aatttccccgacagttaactaccgagggggcaaaaatgtaaattactcgtgtgcctaagccttatg 31094519  T
Q  140 caatgtgtcaacaacaattctc 161  Q
    |||||| |||||||||||||||    
T  31094518 caatgtatcaacaacaattctc 31094497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 113
Target Start/End: Original strand, 42539374 - 42539464
Alignment:
Q  23 tggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    ||||||||||| ||| | |||||||||| |||||||||||||||   |||| ||||||||| |||||| ||  | || |||||||||||||    
T  42539374 tggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatttctcgacagttagctacctaaggggcaaaaacgta 42539464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 24053234 - 24053117
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    ||||| |||| ||||||||||||| | ||||||||||| ||||||| ||||||| |||  |  ||||||||||  ||| |  | |||||| |||||||      
T  24053234 gtttttctcggcagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctcgaccttatca 24053135  T
Q  141 aatgtgtcaacaacaatt 158  Q
     |||||||||||||||||    
T  24053134 tatgtgtcaacaacaatt 24053117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 38855711 - 38855760
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  38855711 ttggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 38855760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 38968166 - 38968097
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaact 93  Q
    |||||||||| | |||||||||||||| ||||||||||||||| | ||||  ||| ||||| ||||||||    
T  38968166 ggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctcggtagttaact 38968097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 39743162 - 39743234
Alignment:
Q  36 ccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaa 108  Q
    ||||||||||||||| ||||||||||||| |   |||  |||| |||||||||||||||||||  ||||||||    
T  39743162 ccgaggttttcctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggggcaaaa 39743234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 8680260 - 8680381
Alignment:
Q  36 ccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacct 135  Q
    |||| ||||||||||| |||||||||||||| |||    ||||   ||||||||||||| |||| |||||     ||||||||||||| || | |  |||    
T  8680260 ccgaagttttcctcgatagttaactgcagcctgttccataatt---cggcagttaactgccgaa-gggcatttgggtaaattactcgtgtgacacagcct 8680355  T
Q  136 tatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||||||||||||||    
T  8680356 tatgcaatgtgtcaacaacaattctc 8680381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 11346076 - 11346037
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagc 65  Q
    |||||||| |||||||||||||||| ||||||||||||||    
T  11346076 cagttaactaccgaggttttcctcggcagttaactgcagc 11346037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 13837795 - 13837748
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  13837795 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 13837748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 19228671 - 19228782
Alignment:
Q  47 ctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtg 146  Q
    |||| |||||||||||| || |||||| ||||  |||||||||||||| |||  |||||   |||||  ||||| || ||||||  ||||||  ||||||    
T  19228671 ctcggcagttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtg 19228770  T
Q  147 tcaacaacaatt 158  Q
    ||||||||||||    
T  19228771 tcaacaacaatt 19228782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 28238210 - 28238163
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  28238210 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 28238163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 42099087 - 42099154
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||  |||||||||||||||| |||||||| |||||||||||    ||||||| ||||||||||    
T  42099087 agttaactgccgaggttttcctcgatagttaactacagccagttttattttttctcgacagttaactg 42099154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 25499904 - 25499978
Alignment:
Q  39 aggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    |||||||||||| |||||||| ||| || ||||||||||| ||||  ||||||||| |||  |||||||| ||||    
T  25499904 aggttttcctcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgta 25499978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 161
Target Start/End: Complemental strand, 26366867 - 26366822
Alignment:
Q  116 ttactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||| ||||||  ||||||||||||| |||||||||||||||    
T  26366867 ttactcgtgtgtctcagccttatgcaatgtatcaacaacaattctc 26366822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 42537216 - 42537135
Alignment:
Q  80 ctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||| |||  ||||||||| |||  |||||||| | ||||  ||||||  ||||||| |||||||||||||    
T  42537216 ctcggcagttaactgccgatggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgtgaacaacaattctc 42537135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 7e-30; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 7247864 - 7247999
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||| |||  |||||||| ||||  ||| |||| |    
T  7247864 cagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattttattcgtgt 7247963  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | |||  |||||| ||||||||||||||||||||||    
T  7247964 gcctcagccttatccaatgtgtcaacaacaattctc 7247999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 41803069 - 41802939
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| ||||||||||||||| |||||| ||||  |||||||||||||| ||| ||||||||||||||  ||||||||    
T  41803069 ggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccgagtgggcaaaaacgtattttactcgt 41802970  T
Q  124 atgtctccaccttatgcaatgtgtcaacaac 154  Q
    || ||||  || |||| |||||||| |||||    
T  41802969 atttctcagccatatgaaatgtgtcgacaac 41802939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 55 - 161
Target Start/End: Complemental strand, 55267481 - 55267375
Alignment:
Q  55 ttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaac 154  Q
    ||||||||||||  ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||| ||||||  |||||||||| |||||||||||    
T  55267481 ttaactgcagccgatttttgaattcttcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtgtctcagccttatgcaacgtgtcaacaac 55267382  T
Q  155 aattctc 161  Q
    |||||||    
T  55267381 aattctc 55267375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 6489400 - 6489267
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||| |||||||| ||||||||||||||| |||| | |||| |||||||    |||| |||  |||||||||||||||||||| ||    
T  6489400 ggcagttaactaccgaggatttcctcggcagttaactgcagccggtttcttaattcctcggca----actgccgagggggcaaaaacgtaaattacttgt 6489305  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || ||| ||||||||||||||||||||| ||||||||    
T  6489304 gtgcctcaaccttatgcaatgtgtcaacagcaattctc 6489267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 46989617 - 46989481
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |  ||  |||||||||| ||||||||| |||  |||||||||||| | |||||||||    
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaaacgtcatttactcgta 46989518  T
Q  125 tgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || | | |||||||  ||||||| |||||||||||||    
T  46989517 tgacacaaccttattaaatgtgtaaacaacaattctc 46989481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 2432940 - 2433082
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||| ||||||||||||||||||||||| | || ||| ||||||| |||| |||||||||| |||  ||  |||| ||||  |||    
T  2432940 ttttcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtatttta 2433039  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||| || |||  |||||||||||||||||||||||||||||    
T  2433040 ctcgtgtgcctcagccttatgcaatgtgtcaacaacaattctc 2433082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 45 - 161
Target Start/End: Original strand, 19454348 - 19454464
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatg 144  Q
    |||||| |||||||||||| ||  |||||||||| ||| ||||||||||| |||  |||||||| ||||  |||||||| |||||| |||||||||||||    
T  19454348 tcctcggcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtgtctcaaccttatgcaatg 19454447  T
Q  145 tgtcaacaacaattctc 161  Q
    | |||||||||||||||    
T  19454448 tatcaacaacaattctc 19454464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 28611102 - 28611236
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||  |||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||  ||||||||   ||  ||||| ||    
T  28611102 ggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttacttgt 28611201  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     ||||||  ||||||| ||||||| || |||||||    
T  28611202 gtgtctcagccttatgaaatgtgtaaagaacaatt 28611236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 41579721 - 41579863
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||| ||| ||||||| ||| ||| ||||||| |||  ||| |||| ||||  |||    
T  41579721 ttttcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtatttta 41579820  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||  | || |||  |||||||||| ||||||||||||||||||    
T  41579821 cttatgtgcctcagccttatgcaacgtgtcaacaacaattctc 41579863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 11380512 - 11380375
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||| ||| ||||||||| |||||| |||||||||||| |||  |||| |||| ||||||||||||||| |||| |||||||||||||  ||||||||    
T  11380512 ggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaaacgtattttactcgt 11380413  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||  ||| |   |||||||||||||||||||||    
T  11380412 gtttctcagcctaaccaaatgtgtcaacaacaattctc 11380375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 7837637 - 7837526
Alignment:
Q  53 agttaactgcagccagtttttgaatt--tctcggcagtt-aactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtca 149  Q
    |||||||||||||| ||||||||| |  ||||||||||| |||||||||  ||| |||||| ||||||||| || ||||||  |||||||||||||||||    
T  7837637 agttaactgcagccggtttttgaaatcctctcggcagtttaactgtcgagggggaaaaaacttaaattacttgtgtgtctcagccttatgcaatgtgtca 7837538  T
Q  150 acaacaattctc 161  Q
    ||||||||||||    
T  7837537 acaacaattctc 7837526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 46345003 - 46344871
Alignment:
Q  29 ttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtc 128  Q
    ||||| |||||||||||||||| |||||||||||||||  |||||||||| |||| |||||||||| |||  |||||||||  ||  ||||| || || |    
T  46345003 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttacttgtgtgcc 46344904  T
Q  129 tccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || ||||||| |||| |||||||| ||||||||    
T  46344903 tcaaccttatccaatttgtcaacatcaattctc 46344871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 26 - 158
Target Start/End: Complemental strand, 55385206 - 55385074
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| |||||||||||||||| ||||||||||||||| | |||  ||    |||||||||||||| |||  |||||||||||| |||||||||| |    
T  55385206 cagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcaattactcgtgt 55385107  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    | | | |||||||||||||||  ||||||||||    
T  55385106 gccacaaccttatgcaatgtgggaacaacaatt 55385074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 52570568 - 52570701
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||||||| ||||  |||||||||||| | |||||||||||  |||||||||||||| || | ||| |||||||||  ||| ||||    
T  52570568 ggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccg-aggggaaaaaacgtattttaatcgt 52570666  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||||||||||||||| ||||||    
T  52570667 gtgcctcagccttatgcaatgtgtcaacgacaatt 52570701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 19440334 - 19440257
Alignment:
Q  17 attttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| |||| ||||||  ||||||||||||||    
T  19440334 atttttcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactg 19440257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 41577146 - 41577009
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||| || ||||| |||||  |||||||||||||||| ||  ||||| ||||  ||| |||||||||||||||  ||||||||||||  ||| | ||    
T  41577146 ggcagtttactaccgaagtttttgtcgacagttaactgcaaccgattttttaattcatcgacagttaactgtcgaaaaggcaaaaacgtattttatttgt 41577047  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || ||||  ||||||| |||||||||||||||||||||    
T  41577046 atttctcagccttatgaaatgtgtcaacaacaattctc 41577009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 36 - 161
Target Start/End: Original strand, 41805689 - 41805814
Alignment:
Q  36 ccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccacct 135  Q
    ||||||||||||||| ||||||| ||||||| || ||| ||||  ||| |||||||||| |||    |||||||||||||||||| || || |||  |||    
T  41805689 ccgaggttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcctcagcct 41805788  T
Q  136 tatgcaatgtgtcaacaacaattctc 161  Q
    |||||||||||||| |||||||||||    
T  41805789 tatgcaatgtgtcatcaacaattctc 41805814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 13896878 - 13897004
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| || ||||  || ||| ||||||| |||   | ||||||| ||  ||||||||    
T  13896878 ggcagttaactaccgaggttttcctcgacagttaactgcagccagttattaaattcttcagcaattaactgccgaggagtcaaaaacatattttactcgt 13896977  T
Q  124 atgtctccaccttatgcaatgtgtcaa 150  Q
     |||||   ||||||||||||| ||||    
T  13896978 gtgtcttagccttatgcaatgtatcaa 13897004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 29929497 - 29929363
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | |||||||||||||| ||||||| ||||||| ||||||||||| |||  ||||||||||||||  | |||||| | ||  ||||| ||    
T  29929497 ggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgt 29929398  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||  ||||||||||||||||||    
T  29929397 gtgcctcagccttataaaatgtgtcaacaacaatt 29929363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 29978651 - 29978517
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | |||||||||||||| ||||||| ||||||| ||||||||||| |||  ||||||||||||||  | |||||| | ||  ||||| ||    
T  29978651 ggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttacttgt 29978552  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||  ||||||||||||||||||    
T  29978551 gtgcctcagccttataaaatgtgtcaacaacaatt 29978517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 34691696 - 34691626
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||||||||||||||||||||||||||||| | |||| | || |||||||||||||||    
T  34691696 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactg 34691626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 52567834 - 52567697
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||| | ||||| |||| ||||||| |||||||  ||||||||||  |||||||||||||| |||   ||||||| ||||  ||||||||    
T  52567834 ggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttactcgt 52567735  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  |||||||||| || |||||||||||||||    
T  52567734 gtgcctcagccttatgcaacgtatcaacaacaattctc 52567697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 55207665 - 55207802
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||| ||||| |||| | |||||||||||| || |||||||||||  |||||||||||||| |||  ||||||||  |||  ||||||||    
T  55207665 ggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggcagttaactgccgatggggcaaaagagtattttactcgt 55207764  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||  || |||| |||||||||||| ||||||||    
T  55207765 gtttctcagccatatgaaatgtgtcaacatcaattctc 55207802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 7839503 - 7839600
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||| |  |||||  |||||||||||||| ||||||||||| |||| ||||| |||| |||  |||||||||||||||||||||||    
T  7839503 ggcagttaactaccgaggat--cctcggtagttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaaacgtaaattactcgt 7839600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 20918013 - 20918148
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga-atgggcaaaaacgtaaattactcg 122  Q
    |||||||||| |||||||||||||||| |||||||||| |||| | |||| ||||  ||||||||||| ||||||   ||||||||| |||  |||| ||    
T  20918013 ggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaattgtcgaggggggcaaaaatgtattttac-cg 20918111  T
Q  123 tatgtctccaccttatgcaatgtgtcaacaacaattc 159  Q
    ||| ||||  ||||||  |||||||||||||||||||    
T  20918112 tatttctcagccttatcaaatgtgtcaacaacaattc 20918148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 20926975 - 20927110
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga-atgggcaaaaacgtaaattactcg 122  Q
    |||||||||| |||||||||||||||| |||||||||| |||| | |||| ||||  ||||||||||| ||||||   ||||||||| |||  |||| ||    
T  20926975 ggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaattgtcgaggggggcaaaaatgtattttac-cg 20927073  T
Q  123 tatgtctccaccttatgcaatgtgtcaacaacaattc 159  Q
    ||| ||||  ||||||  |||||||||||||||||||    
T  20927074 tatttctcagccttatcaaatgtgtcaacaacaattc 20927110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 30256006 - 30256074
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaact 93  Q
    ||||||||| | |||||||||||||| ||||||||||||||| |||||| |||| ||||||||||||||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaact 30256074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 9582624 - 9582546
Alignment:
Q  18 ttttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtc 96  Q
    ||||| ||||||||||   ||| ||||| |||| ||||||||||||| | |||||||||||||||||||||||||||||    
T  9582624 tttttcggcagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactgtc 9582546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 29918343 - 29918477
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | |||||||||||||| ||||||||||||||| ||||| |||||  ||||||||||| || |||  || ||||| ||||  |||||  |    
T  29918343 ggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttat 29918442  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||| ||| ||||||||||||||    
T  29918443 gtgcctcagccttatgaaatatgtcaacaacaatt 29918477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 29967496 - 29967630
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | |||||||||||||| ||||||||||||||| ||||| |||||  ||||||||||| || |||  || ||||| ||||  |||||  |    
T  29967496 ggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttacttat 29967595  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||| ||| ||||||||||||||    
T  29967596 gtgcctcagccttatgaaatatgtcaacaacaatt 29967630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 32060277 - 32060351
Alignment:
Q  87 gttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||| |||| ||| ||||||||||||||||||||||| |||  ||||||||||||||| || ||||||||||    
T  32060277 gttaactatcgagtggacaaaaacgtaaattactcgtatgcctcagccttatgcaatgtgttaaaaacaattctc 32060351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 43476263 - 43476125
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcg 122  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | ||||  ||    |||||||||||||  |||  |||||||||||| | |||||||    
T  43476263 ggcagttaactaccgaggttttcctcggcagttaactgcagccggattttctaaaacttcggcagttaacttccgagggggcaaaaacgtcatttactcg 43476164  T
Q  123 tatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | || | | |||||||| ||||||  |||||||||||||    
T  43476163 tgtggcacaaccttatgtaatgtgagaacaacaattctc 43476125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 50216879 - 50216993
Alignment:
Q  47 ctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtg 146  Q
    |||| ||||||||||||||| | |||| |||| ||||||||||||||| | |  |||||||||||| |||||||||| || | | |||||||  ||||||    
T  50216879 ctcggcagttaactgcagccggatttttaattcctcggcagttaactgccaatggggcaaaaacgtcaattactcgtgtgccacaaccttatcaaatgtg 50216978  T
Q  147 tcaacaacaattctc 161  Q
      |||||||||||||    
T  50216979 ggaacaacaattctc 50216993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 55205349 - 55205271
Alignment:
Q  83 ggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||||||| |||  || |||||||||||||||||| |||| |||  |||||||||||||||||||| ||||||||    
T  55205349 ggcagttaactgccgaggggacaaaaacgtaaattactcatatgcctcagccttatgcaatgtgtcaacatcaattctc 55205271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 600546 - 600683
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||||||||||||||| ||| | |||  ||    ||||||||||||||||||  | |||||||||| | ||||||||    
T  600546 ggcagttaactaccgaggttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgagggcgcaaaaacgtcatttactcgt 600645  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  |||| | |||||||  |||||||||||||    
T  600646 gtgccgcagccttctacaatgtgggaacaacaattctc 600683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 161
Target Start/End: Original strand, 6505973 - 6506090
Alignment:
Q  44 ttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaat 143  Q
    ||||||| ||||||||||||||| |||| | |||| || |||||||||||   ||  || |||||||||||||||||||| || |||  |||||| ||||    
T  6505973 ttcctcggcagttaactgcagccggtttcttaattccttggcagttaacttctgaggggacaaaaacgtaaattactcgtgtgcctcagccttatacaat 6506072  T
Q  144 gtgtcaacaacaattctc 161  Q
    |||||||||  |||||||    
T  6506073 gtgtcaacagtaattctc 6506090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 157
Target Start/End: Complemental strand, 42756230 - 42756097
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||   |||||||||||||| |||||||||||| || | |||| |||| |||| ||||||||||  ||  |||||||||||||  |||||| |    
T  42756230 ggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttactcat 42756131  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaat 157  Q
     | |||  |||||||  |||||||||||||||||    
T  42756130 gtttctgaaccttatcaaatgtgtcaacaacaat 42756097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 19341596 - 19341695
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  |||| ||||||||||  |||||||||||||| | |||  |||| ||||||||||||||| |||  || ||||||||||| ||||||||    
T  19341596 ggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaaacgtaacttactcgt 19341695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 155
Target Start/End: Complemental strand, 66942 - 66841
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    |||||||||||||| ||||| ||||  ||||||||||||||| |||  |||||||| ||||  |||||||| ||||||  ||||||  ||||||||||||    
T  66942 agttaactgcagccggtttt-gaatacctcggcagttaactgccgagggggcaaaagcgtattttactcgtgtgtctcagccttatcaaatgtgtcaaca 66844  T
Q  153 aca 155  Q
    |||    
T  66843 aca 66841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 2743469 - 2743399
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  2743469 ggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 2743399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 48246483 - 48246441
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  48246483 ggcagttaactaccgaggttttcctcgacagttaactgcagcc 48246441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 48888813 - 48888747
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagt 88  Q
    |||||||||||| |||||| ||||||||| ||||||||||||||| | |||| |||| |||||||||    
T  48888813 ttggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcagt 48888747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 48250871 - 48251008
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| |  ||  |||| ||| ||||||||||| |||  |||||||||||| | ||| |  |    
T  48250871 ggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaaacgtcatttatttat 48250970  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||| ||||||  |||||||||||||    
T  48250971 gtggcacaaccttatgtaatgtgggaacaacaattctc 48251008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 51402400 - 51402537
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||||||||||||| ||  |  ||||||||||  || ||| |||||||  ||    |||||||||||  ||||||||    
T  51402400 ggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaattattctgcaattaactgctgaggaagcaaaaacgtattttactcgt 51402499  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | ||||  || |||| |||||||||||| ||||||||    
T  51402500 gtttctcagccatatgaaatgtgtcaacatcaattctc 51402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 2062457 - 2062409
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttt 72  Q
    ||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  2062457 ggcagttaactgccgaagttttcctcgacagttaactgcagccagtttt 2062409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 2647701 - 2647777
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | ||||| ||  | |||||||||||||| ||||    
T  2647701 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 2647777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 30943260 - 30943213
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  30943260 ggcagttaactaccgaggttttcctcggcagttaactgccgccagttt 30943213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 9429851 - 9429921
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||||||||||||  | |||||||||||||  |||  |||| |||||||||||||||    
T  9429851 ggcagttaactaccgaggttttcctcggtacttaactgcagccaaatttcaaattcctcggcagttaactg 9429921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 16647168 - 16647286
Alignment:
Q  43 tttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaa 142  Q
    |||||||| ||||||||||||||| | |||  ||    |||||||||||||| |||  |||||||||||| || ||||||| || |   |||||||||||    
T  16647168 tttcctcggcagttaactgcagccggatttctaaaacatcggcagttaactgccgagggggcaaaaacgtcaagtactcgtgtgccagaaccttatgcaa 16647267  T
Q  143 tgtgtcaacaacaattctc 161  Q
    ||||  |||||||||||||    
T  16647268 tgtgggaacaacaattctc 16647286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 34049151 - 34049109
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  34049151 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 34049109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 43571715 - 43571821
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    |||||||||||||||   ||||||||| ||| ||||||||||| |||  |||||||||| ||  ||||| || |  ||  |||||||| |||||||||||    
T  43571715 cagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttacttgtgtacctgaaccttatgtaatgtgtcaac 43571814  T
Q  152 aacaatt 158  Q
    |||||||    
T  43571815 aacaatt 43571821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 49219796 - 49219862
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaact 93  Q
    ||||||| ||| |||||||||||| ||||||||||||||| | |||  |||| ||||||||||||||    
T  49219796 agttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagttaact 49219862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 54389866 - 54389824
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  54389866 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 54389824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 4002507 - 4002643
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| | |||  |||| ||| | ||||||||| || | ||||||||  ||||| |||||||    
T  4002507 ggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccg-aggggcaaaagagtaaaatactcgt 4002605  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  ||||||| || |||| |||| ||||||||    
T  4002606 gtggcacagccttatgtaaagtgtaaacagcaattctc 4002643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 43478832 - 43478969
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||| |||||||||| ||||||||||||||| | |||  ||    || ||||||||||| |||  || ||||||| | | ||||||||    
T  43478832 ggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcagcagttaactgccgaggggacaaaaacatcatttactcgt 43478931  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||| ||||||  |||||||||||||    
T  43478932 gtggcacaaccttatgtaatgtgggaacaacaattctc 43478969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 14402989 - 14403109
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||| ||||||||| | ||| | |||  |||| ||||||||||||||| |||  ||||||||  ||||| ||||||| || | |  |||||||     
T  14402989 gttttcctcggcagttaactaccgccggatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtggcacagccttatgt 14403088  T
Q  141 aatgtgtcaacaacaattctc 161  Q
    || |||| |||||||||||||    
T  14403089 aaagtgtaaacaacaattctc 14403109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 45101872 - 45101984
Alignment:
Q  46 cctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgt 145  Q
    ||||| ||||||||||||||| ||||||||||| |||  || ||||||| |||  ||  |||||||||  |||||  | || ||| |||||||| |||||    
T  45101872 cctcggcagttaactgcagccggtttttgaattcctcaacaattaactgccgaggggataaaaacgtattttacttatgtgcctcaaccttatgaaatgt 45101971  T
Q  146 gtcaacaacaatt 158  Q
    ||| |||||||||    
T  45101972 gtcgacaacaatt 45101984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 1293448 - 1293401
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    ||||||||||  ||||||||||||||| ||||||||||| ||||||||    
T  1293448 ggcagttaactcccgaggttttcctcggcagttaactgccgccagttt 1293401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 3501897 - 3501944
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  3501897 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 3501944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 41844366 - 41844413
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  41844366 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 41844413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 4004805 - 4004847
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||  |||||||||||||||| |||||||||||||||    
T  4004805 ggcagttaagtaccgaggttttcctcggcagttaactgcagcc 4004847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 71
Target Start/End: Complemental strand, 8475896 - 8475850
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    ||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  8475896 gcagttaactaccgaggttttcctcggcagttaactgccgccggttt 8475850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 94
Target Start/End: Complemental strand, 20366235 - 20366193
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||||||  ||||||||||| |||||||||||||||    
T  20366235 cagttaactgcagctggtttttgaattcctcggcagttaactg 20366193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 35743584 - 35743622
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  35743584 ggcagttaactaccgaggttttcctcggcagttaactgc 35743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 36812908 - 36812770
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcg 122  Q
    ||||||| || ||||||||||||||||  |||||||||||||| | ||||  |||| ||||| || |||||| |||  ||||||||  ||||| ||||||    
T  36812908 ggcagtttactaccgaggttttcctcggtagttaactgcagccggattttcaaattcctcggtagctaactgccgagggggcaaaagagtaaaatactcg 36812809  T
Q  123 tatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | || | |  ||||||| || |||| |||| ||||||||    
T  36812808 tgtggcacatccttatgtaaagtgtaaacagcaattctc 36812770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 36817523 - 36817565
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||    
T  36817523 ggcagttaactaccgaggatttcctcgatagttaactgcagcc 36817565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 42760211 - 42760253
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  42760211 ggcagttaactaccgaggttttcctcggcagttaactacagcc 42760253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 44227183 - 44227141
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  44227183 ggcagttaactaccgaggttttcctcggcagttaactccagcc 44227141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 46697782 - 46697744
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  46697782 ggcagttaactaccgaggttttcctcggcagttaactgc 46697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 49140849 - 49140891
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| || ||||||||||||| |||||||||||||||    
T  49140849 ggcagttaactactgaggttttcctcggcagttaactgcagcc 49140891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 49195024 - 49194954
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||  |||||||  |||||||||||||||| | |||| |||| ||| |||||||||||    
T  49195024 ggcagttaactaccgaaattttccttaacagttaactgcagccggctttttaattcctcagcagttaactg 49194954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 50477251 - 50477213
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  50477251 ggcagttaactaccgaggttttcctcggcagttaactgc 50477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 3112799 - 3112868
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaact 93  Q
    ||||||||||  | |||||||||||||| | |||| ||||||| ||||| || || ||||||||||||||    
T  3112799 ggcagttaactgctgaggttttcctcgataattaattgcagccggttttggacttcctcggcagttaact 3112868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 13743347 - 13743294
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  13743347 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 13743294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 34645638 - 34645593
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcag 64  Q
    |||| ||||||||||  |||||||||||||||| ||||||||||||    
T  34645638 ttttcggcagttaactgccgaggttttcctcgagagttaactgcag 34645593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 41137772 - 41137719
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  41137772 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 41137719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 44523456 - 44523493
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||||| ||||||||||||| |||||||||||    
T  44523456 gcagttaacaactgaggttttcctcggcagttaactgc 44523493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 49196453 - 49196550
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||| | || |||||||||||  ||||||||||| || | |||| |||| |||| |||||| || ||||  |||||||||||||  ||||||||    
T  49196453 cagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttactcgt 49196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 50998656 - 50998689
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagtta 57  Q
    |||||||||| |||||||||||||||||||||||    
T  50998656 ggcagttaactaccgaggttttcctcgacagtta 50998689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 51696573 - 51696654
Alignment:
Q  80 ctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||  |||  ||||||||| ||||||||||||| || | |  ||||||  |||||| ||||||||||||||    
T  51696573 ctcggcagttaactaccgagggggcaaaaaagtaaattactcgtgtgccacagccttatcaaatgtggcaacaacaattctc 51696654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 1e-28; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 44051094 - 44051231
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||| ||||||||  |||||||||||||| |||| | | || ||||||||||||| | |||  |||||||||||||||||||| ||    
T  44051094 ggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaattactggt 44051193  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  |||||||||||||||||||||||||||||    
T  44051194 gtgcctcagccttatgcaatgtgtcaacaacaattctc 44051231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 49572904 - 49573039
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    ||||| || |||||||||||||||| |||||||||||||||  || ||||||| |||| ||||||||||||||  |||||||||||||  ||||| || |    
T  49572904 cagtttactaccgaggttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgt 49573003  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | |||  |||||||||||||||||||||| ||||||    
T  49573004 gcctcagccttatgcaatgtgtcaacaacgattctc 49573039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 4979919 - 4980056
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||   |||||||  ||||||||||||||| ||||||||| |  ||| |||||||||| |||  | | |||||||||||||||||||    
T  4979919 ggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaattactcgt 4980018  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || ||| ||||||||||||||||||||||||||||||    
T  4980019 gtgcctcaaccttatgcaatgtgtcaacaacaattctc 4980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 26 - 161
Target Start/End: Complemental strand, 6280926 - 6280791
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| ||||| |||||||||   | |||||||||||| |||||| ||||  | | |||||||||| |||  ||||||||||||||||||||||| |    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaacgtaaattactcgtgt 6280827  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | | | ||||||||||||||||||||||||||||||    
T  6280826 gccccaaccttatgcaatgtgtcaacaacaattctc 6280791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 42 - 158
Target Start/End: Original strand, 21472504 - 21472620
Alignment:
Q  42 ttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgca 141  Q
    ||||||||| |||||||||||||||  |||||||||| ||||||||||||||| |||   ||||||||||||  |||||||| | ||||  ||||||| |    
T  21472504 ttttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaa 21472603  T
Q  142 atgtgtcaacaacaatt 158  Q
    |||||||||||||||||    
T  21472604 atgtgtcaacaacaatt 21472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 955868 - 955729
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||||||||||| |||| |||||||||||||||  |||||||||| ||| ||||||||||| | ||  ||||||||||||  |||    
T  955868 ttttcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtatttta 955769  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    || || || ||| || ||||| |||||||||||| |||||    
T  955768 cttgtgtgcctcaactttatgaaatgtgtcaacatcaatt 955729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 29700304 - 29700438
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||| ||||| |||||||||||||||| ||||||||||||||| ||| ||||||| ||| |||||||||||||||   | ||||| ||||  ||||| ||    
T  29700304 ggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgaggagacaaaagcgtattttacttgt 29700403  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||| ||||||||||||||||||    
T  29700404 gtgcctcagccttatgaaatgtgtcaacaacaatt 29700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 37959717 - 37959856
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||||| |||||||||| ||||||||||||||  ||| || |||| |||  |||||||||| |||  ||| |||||||||  |||    
T  37959717 ttttcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtatttta 37959816  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    ||||| || |||  ||||||| ||||||||||||||||||    
T  37959817 ctcgtgtgcctcagccttatgtaatgtgtcaacaacaatt 37959856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 51426613 - 51426474
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| || |||||||| |||| || ||||||||||||  |||||||||| |||| ||||||||||||||| || ||||||||||  |||    
T  51426613 ttttcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtatttta 51426514  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
    || || || ||   ||||||| || |||||||||||||||    
T  51426513 cttgtgtgcctaagccttatgaaacgtgtcaacaacaatt 51426474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 19 - 161
Target Start/End: Complemental strand, 11494619 - 11494478
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||| | ||||||||| |||| ||||||| || |||  || ||||||||||  |||    
T  11494619 ttttcggcagttaactaccgaggttttcctcggcagttaactgcagcc-ggttttgaattcctcgacagttaattgccgaggggacaaaaacgtatttta 11494521  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||| | ||||  |||| |  |||||||| ||||||||||||    
T  11494520 ctcgtgtttctcacccttttcaaatgtgtcgacaacaattctc 11494478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 44561332 - 44561466
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||| |||||||||  |||||||||||||| |||||| | || |||||||||||||   |||  |||||||| ||||  ||||||||    
T  44561332 ggcagttaactaccgagattttcctcggtagttaactgcagccggttttttatttactcggcagttaacaaccgagagggcaaaatcgtattttactcgt 44561431  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     | ||||  ||||||| ||||||||||||||||||    
T  44561432 gtttctcagccttatgaaatgtgtcaacaacaatt 44561466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 958596 - 958729
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| |||||||||||| || |||||||||||  || |||||||||||||||  || ||||||||||  |||||  |    
T  958596 ggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcatc-gcagttaactgtcgagaggacaaaaacgtattttacttat 958694  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || |||  ||||||  |||||||||||| |||||    
T  958695 gtgcctcagccttataaaatgtgtcaacatcaatt 958729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 21470974 - 21470840
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||  | ||||||||||| ||||||||||||  |||| |||||||||| |||   | ||||||||||  ||||| ||    
T  21470974 ggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttacttgt 21470875  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     || ||| ||||||| |||||||| || |||||||    
T  21470874 gtgcctcaaccttatccaatgtgtaaagaacaatt 21470840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 43 - 123
Target Start/End: Complemental strand, 50274812 - 50274732
Alignment:
Q  43 tttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||| ||||||||||||||| | |||  |||| ||||||||||||||| |||  |||||||||||||||||||||||    
T  50274812 tttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaacgtaaattactcgt 50274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 50278817 - 50278937
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||| ||||||||||||||| | |||  ||||  ||| ||||||||||||||  || |||||||||||||||||||| || | | |||||||      
T  50278817 gttttcctcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgtaaattactcgtgtgccacaaccttatca 50278916  T
Q  141 aatgtgtcaacaacaattctc 161  Q
    ||||||  |||||||||||||    
T  50278917 aatgtgggaacaacaattctc 50278937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 1042006 - 1041907
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||| |||| |||| ||||||||||||| | | |||  |||| ||||||||||||||| |||  ||||||||| |||||||||||||    
T  1042006 ggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggcagttaactgccgatcgggcaaaaaagtaaattactcgt 1041907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 161
Target Start/End: Original strand, 38464770 - 38464904
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtat 125  Q
    |||||||| |||||||||||||| ||||||||||||||||| | ||| ||||| |||| || |||||||||||    |||||| | ||  |||||| | |    
T  38464770 cagttaactaccgaggttttccttgacagttaactgcagcc-ggtttcgaattcctcgtcatttaactgtcgaggaagcaaaatcatattttactcatgt 38464868  T
Q  126 gtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
      ||| |||||||| |||||||||||||||||||||    
T  38464869 acctcaaccttatgaaatgtgtcaacaacaattctc 38464904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 9890065 - 9889995
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  9890065 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 9889995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 15999801 - 15999871
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||||||||||||| ||||||| ||||||| | |||  ||||||||||||||||||||    
T  15999801 ggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactg 15999871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 34151690 - 34151616
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaact 93  Q
    |||| ||||||| || |||||||||||||||| |||||||||||||||  |||||||||| ||||||| ||||||    
T  34151690 ttttcggcagtttactaccgaggttttcctcggcagttaactgcagccgatttttgaattactcggcatttaact 34151616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 34154432 - 34154538
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    ||||||||||||||| |||||| |||| ||||||||||||||| |||  || |||||| |||  |||| ||| | ||||  ||||||| |||||||||||    
T  34154432 cagttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtattttacccgtgtttctcagccttatgaaatgtgtcaac 34154531  T
Q  152 aacaatt 158  Q
    |||||||    
T  34154532 aacaatt 34154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 56138323 - 56138229
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt-----ttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    |||||||||| || ||||||||||||| ||||||||||||||| | ||     || ||||||||||||||||||||||||| |||||||| ||||    
T  56138323 ggcagttaactactgaggttttcctcggcagttaactgcagccggatttttaatttaatttctcggcagttaactgtcgaaggggcaaaatcgta 56138229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 33051611 - 33051562
Alignment:
Q  170 tttctagtttgcagcattaaaacttgtgaccctcaaattaattttctatt 219  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||    
T  33051611 tttctagtttgcagcaataaaacttgtgaccctcacattaattttctatt 33051562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 44049164 - 44049086
Alignment:
Q  77 tttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||||||||||||| |||  ||| ||||||||||||||||||| ||      |||||||||||||||||||||||||||||    
T  44049164 tttctcggcagttaactgccgagggggtaaaaacgtaaattactcgtgtg------ccttatgcaatgtgtcaacaacaattctc 44049086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 56304926 - 56304811
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatg 144  Q
    |||||| || |||||||||||||| |||| |||| |||| |||||||||| || ||||||||||| |||  |||||||| | |||| |||||||  ||||    
T  56304926 tcctcggcaattaactgcagccagatttttaattcctcgacagttaactgccg-atgggcaaaaatgtattttactcgtgtttctcaaccttatcaaatg 56304828  T
Q  145 tgtcaacaacaattctc 161  Q
    ||  |||||||||||||    
T  56304827 tgggaacaacaattctc 56304811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 4768726 - 4768615
Alignment:
Q  47 ctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtg 146  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||| |||  ||||||||   ||  ||||| || ||  ||  ||||||| ||||||    
T  4768726 ctcggcagttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtg 4768627  T
Q  147 tcaacaacaatt 158  Q
    ||||||||||||    
T  4768626 tcaacaacaatt 4768615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 15995793 - 15995723
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | |||  |||| ||||||| |||||||    
T  15995793 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactg 15995723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 19069258 - 19069188
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | |||  |||| ||||||| |||||||    
T  19069258 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactg 19069188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 41023457 - 41023387
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||| |||||||  ||||||||||||||| | |||  ||||||||||||||||||||    
T  41023457 ggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactg 41023387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 24417444 - 24417487
Alignment:
Q  50 gacagttaactgcagccagtttttgaatttctcggcagttaact 93  Q
    ||||||||||||||||| |||||||||||||||| |||||||||    
T  24417444 gacagttaactgcagccggtttttgaatttctcgacagttaact 24417487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 38460497 - 38460450
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||  ||||||||||||||||||||||||||||||| |||||    
T  38460497 ggcagttaattaccgaggttttcctcgacagttaactgcagctagttt 38460450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 55407795 - 55407858
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcag 87  Q
    |||||||||| |||||| ||||||||| ||||||||||||||| | |||| |||| ||||||||    
T  55407795 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcag 55407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 6178112 - 6178154
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  6178112 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 6178154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 17342213 - 17342143
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| ||||| ||||  ||||||||||||||  ||| |||||| |||||||||||||||    
T  17342213 ggcagttaactaccgaagtttttctcggtagttaactgcagccgatttatgaattcctcggcagttaactg 17342143  T

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Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 21022890 - 21022932
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  21022890 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 21022932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 24414902 - 24414832
Alignment:
Q  28 gttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    |||||| ||||||||||| |||  |||||||||||| ||  |||||||||| |||||||||||| ||||||    
T  24414902 gttaactaccgaggttttactcagcagttaactgcaaccgatttttgaattcctcggcagttaattgtcga 24414832  T

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Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 34503780 - 34503710
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| ||||| ||||  |||||||||||||  |||| |||||| |||||||||||||||    
T  34503780 ggcagttaactaccgaagtttttctcggtagttaactgcagctggtttatgaattcctcggcagttaactg 34503710  T

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Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 49094155 - 49094113
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  49094155 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 49094113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 67663 - 67626
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactg 61  Q
    |||||||||| |||||||||||||||||||||||||||    
T  67663 ggcagttaactaccgaggttttcctcgacagttaactg 67626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 16984163 - 16984300
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| | |||||||||||||| ||||||||||||||| | |||  ||    |||||||||||||| |||  ||| |||||||| | ||||||||    
T  16984163 ggcagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactcgt 16984262  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  ||||||  ||||||| |||| ||||||||    
T  16984263 gtggcacagccttatcaaatgtgtaaacagcaattctc 16984300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 20208580 - 20208539
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  20208580 gcagttaactaccgaggttttcctcggcagttaactgcagcc 20208539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 28320542 - 28320493
Alignment:
Q  112 taaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||||||| || | | ||||||||||||||||||||||||||||||    
T  28320542 taaattactcgtgtgacacaaccttatgcaatgtgtcaacaacaattctc 28320493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 39590570 - 39590611
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagc 65  Q
    |||||||||| |||||||||||||||| ||||||||||||||    
T  39590570 ggcagttaactaccgaggttttcctcggcagttaactgcagc 39590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 9472927 - 9472859
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||  ||||| | ||||||||  ||||||||||||||||||| |||||| ||| |||||||||||    
T  9472927 cagttaattaccgaagatttcctcggtagttaactgcagccagtttatgaattcctcagcagttaactg 9472859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 39588142 - 39588026
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatg 144  Q
    |||||| ||||||||||||| |   |||  |||| ||||||||||||||| |||  |||||||||||| | |||||||| || | |  |||||||||||     
T  39588142 tcctcggcagttaactgcagtcgaatttctaattcctcggcagttaactgccgagggggcaaaaacgtcatttactcgtgtgacacatccttatgcaata 39588043  T
Q  145 tgtcaacaacaattctc 161  Q
    ||  |||||||||||||    
T  39588042 tgagaacaacaattctc 39588026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 49422187 - 49422080
Alignment:
Q  46 cctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgt 145  Q
    ||||||||||||||||||||| |||||| |||| ||||||||||      |||| |||||||||||||  ||| | || || |||  ||||||| |||||    
T  49422187 cctcgacagttaactgcagccggttttttaattcctcggcagtt-----ccgaaggggcaaaaacgtattttatttgtgtgactcagccttatgaaatgt 49422093  T
Q  146 gtcaacaacaatt 158  Q
    || ||||||||||    
T  49422092 gtaaacaacaatt 49422080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 55793991 - 55793915
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaa 99  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| | ||||| ||  | |||||||||||||| ||||    
T  55793991 ggcagttaactcccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 55793915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 72545 - 72510
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaact 60  Q
    ||||||||| ||||||||||||||||||||||||||    
T  72545 gcagttaactaccgaggttttcctcgacagttaact 72510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 95
Target Start/End: Complemental strand, 19993085 - 19993042
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgt 95  Q
    |||||||||| |||| |||| |||||||||||||||||||||||    
T  19993085 cagttaactgtagccggtttatgaatttctcggcagttaactgt 19993042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 30726743 - 30726790
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  30726743 ggcagttaactaccgaggttttcctcggcagttaactgctgccggttt 30726790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 37563282 - 37563329
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  37563282 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 37563329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 39773475 - 39773428
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  39773475 ggcagttaactaccgaggttttcctcggcagttaactgctgccggttt 39773428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 40358282 - 40358329
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  40358282 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 40358329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 54634017 - 54634064
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  54634017 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 54634064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 18884506 - 18884576
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||  |||| ||||| |||| ||||||||||||||| |||||| ||  | ||||||||||||||    
T  18884506 ggcagttaactgccgaagtttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactg 18884576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 19073657 - 19073699
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| ||||||| |||||||| |||||||||||||||    
T  19073657 ggcagttaactaccgaggatttcctcggcagttaactgcagcc 19073699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 31425320 - 31425358
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  31425320 ggcagttaactaccgaggttttcctcggcagttaactgc 31425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 150
Target Start/End: Complemental strand, 33383876 - 33383750
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  ||||||||||||||| ||||||||||||| | |||||| || | |||| || ||||||  |||   |||||||| |||  ||||| ||    
T  33383876 ggcagttaacttccgaggttttcctcggcagttaactgcagtcggtttttaaaatcctcgacaattaactaccgagaaggcaaaaatgtattttacttgt 33383777  T
Q  124 atgtctccaccttatgcaatgtgtcaa 150  Q
     || ||  |||||||| ||||||||||    
T  33383776 gtgcctaaaccttatgaaatgtgtcaa 33383750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 41795358 - 41795400
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| | |||||||||||||| |||||||||||||||    
T  41795358 ggcagttaactaacgaggttttcctcggcagttaactgcagcc 41795400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 51492142 - 51492100
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||| | |||||||||||||||    
T  51492142 ggcagttaactaccgaggttttcctaggcagttaactgcagcc 51492100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 3403900 - 3403843
Alignment:
Q  42 ttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    ||||||||| ||||||||||||||| | |||  |||| ||||||||||||||| ||||    
T  3403900 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaa 3403843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 4975821 - 4975752
Alignment:
Q  91 actgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattct 160  Q
    ||||||||  ||| ||||||||||||||||||| || |||  |||| | ||||||||||| |||||||||    
T  4975821 actgtcgagggggtaaaaacgtaaattactcgtgtgcctcagcctttttcaatgtgtcaataacaattct 4975752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 26792244 - 26792293
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||||| |||||| ||||||||| ||||||||||| ||| ||||    
T  26792244 ttggcagttaactaccgagattttcctcggcagttaactgccgccggttt 26792293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 46097041 - 46097086
Alignment:
Q  116 ttactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    |||||||| ||||||  ||||||||||||| |||||||||||||||    
T  46097041 ttactcgtgtgtctcagccttatgcaatgtatcaacaacaattctc 46097086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 63; Significance: 7e-27; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 20114 - 20252
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggc-aaaaacgtaaattactcg 122  Q
    |||||| ||| ||||||| ||||||||||||||||||| ||||  |||||||||| |||||||||||||||   ||  ||| ||||||||||||||||||    
T  20114 ggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaactgctaaagaggcaaaaaacgtaaattactcg 20213  T
Q  123 tatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | ||||||  ||||||||||||||| |||| ||||||||    
T  20214 tgtgtctcagccttatgcaatgtgtaaacatcaattctc 20252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 15754 - 15675
Alignment:
Q  44 ttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatg-ggcaaaaacgtaaattactcgt 123  Q
    ||||||| |||||||||||| || ||||||||||| |||| |||||||||||| |||| ||||||||||||||||||||||    
T  15754 ttcctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtc-aatgaggcaaaaacgtaaattactcgt 15675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 1e-25; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 29286283 - 29286163
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||| |||||||||||| || |||| | | || ||||||||||||||  |||  |||||||||||||||||||| || || ||| |||||||||    
T  29286283 gttttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgc 29286184  T
Q  141 aatgtgtcaacaacaattctc 161  Q
    |||||||||||||||||||||    
T  29286183 aatgtgtcaacaacaattctc 29286163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 7361258 - 7361125
Alignment:
Q  28 gttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgt 127  Q
    |||||| ||||||| |||||||| ||||||||||||||| |||||| || | ||| |||||||| || |||  || |||||||||||||||||||| ||     
T  7361258 gttaactaccgaggatttcctcggcagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaaacgtaaattactcgtgtgc 7361159  T
Q  128 ctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | |  |||||||||||||||||||| ||||||||    
T  7361158 cacagccttatgcaatgtgtcaacagcaattctc 7361125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 25141098 - 25141218
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||| |||||||||| |||  || |||||||| |||| |||||||||| ||||||| ||||||  ||||||| |||| || |||  ||||||||    
T  25141098 gttttcctcggcagttaactgtagctggtatttgaattcctcgacagttaactgccgaatggacaaaaatataaattattcgtgtgcctcagccttatgc 25141197  T
Q  141 aatgtgtcaacaacaattctc 161  Q
    |||||||||||||||||||||    
T  25141198 aatgtgtcaacaacaattctc 25141218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 24 - 123
Target Start/End: Complemental strand, 31768824 - 31768725
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| || |||||||||||| | |||| |||| ||||||||||||||| |||  ||||||||| |||||||||||||    
T  31768824 ggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgt 31768725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 24 - 158
Target Start/End: Complemental strand, 23958961 - 23958827
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||| || |||||||||||| ||||| ||||||||||||||||||||| |||  || ||||||||||  ||| | |     
T  23958961 ggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtattttagttgg 23958862  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaatt 158  Q
     ||||||  ||||||   |||||||||||||||||    
T  23958861 gtgtctcagccttatcatatgtgtcaacaacaatt 23958827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 32643521 - 32643593
Alignment:
Q  22 ttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||||| |||||||||||||||||||||||||||||||| | |||| |||| || ||||||||||||    
T  32643521 ttggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactg 32643593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 11840252 - 11840389
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc-agtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcg 122  Q
    |||||||||| |||||||||||||||||||||||||||||||| | ||| | ||  | |||||||||||||  | |  |||||||||| | |||||||||    
T  11840252 ggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttctaaaact-tcggcagttaactaccaagggggcaaaaacatcaattactcg 11840350  T
Q  123 tatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    | |||| |  ||||||||||||||  |||||||||||||    
T  11840351 tgtgtcacagccttatgcaatgtgggaacaacaattctc 11840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 12783959 - 12784048
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    |||||||||| || ||||||||||||||||| ||||||||||| ||| |||||||  |||||||||||||| |||  |||||||| ||||    
T  12783959 ggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaattcatcggcagttaactgccgatggggcaaaagcgta 12784048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 13388710 - 13388779
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaact 93  Q
    |||||||||| ||||||||||||||||||||||||||||||||   |||  |||||||||||||||||||    
T  13388710 ggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagttaact 13388779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 19 - 160
Target Start/End: Original strand, 13404629 - 13404770
Alignment:
Q  19 tttttggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaatta 118  Q
    |||| |||||||||| ||| ||||||||| || ||||||||||||||  ||| ||||||| |||| |||||||||  |||  |||||||  ||||  |||    
T  13404629 ttttcggcagttaactaccaaggttttccacggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtatttta 13404728  T
Q  119 ctcgtatgtctccaccttatgcaatgtgtcaacaacaattct 160  Q
    || || || |||  ||||||||||||||| ||||||||||||    
T  13404729 cttgtgtgcctcggccttatgcaatgtgttaacaacaattct 13404770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 18606115 - 18605979
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||  |||||||||||||||| ||||||||||||||| || |   |||| || |||||||||||  |||  |||||||||||||  ||||||||    
T  18606115 ggcagttaagtaccgaggttttcctcggcagttaactgcagccggtgtca-aattcctaggcagttaactaccgagggggcaaaaacgtattttactcgt 18606017  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  ||| || ||||||||||||||||||||||    
T  18606016 gtgcctcagcctcatacaatgtgtcaacaacaattctc 18605979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 2051098 - 2050963
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgta 124  Q
    |||| |||| |||||||||||||||| |||||||||||| || ||||   ||||  |||||||||||||| |||| | |||||||||||  ||||||||     
T  2051098 gcagataactaccgaggttttcctcggcagttaactgcaaccggtttca-aattcatcggcagttaactgccgaaggagcaaaaacgtattttactcgtg 2051000  T
Q  125 tgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||  ||  |||||||||||||||||| | ||||||||    
T  2050999 tgcatcagccttatgcaatgtgtcaatagcaattctc 2050963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 31146444 - 31146374
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| |||||||||||||||||||||||||| | |||  |||| |||||||||||||||    
T  31146444 ggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactg 31146374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 16192840 - 16192751
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgta 113  Q
    ||||||||||  |||||| ||||||||||| ||||||||||||  ||||| |||| |||| |||||||||| |||  |||||||||||||    
T  16192840 ggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactgccgagggggcaaaaacgta 16192751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 29076325 - 29076462
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||  ||||||||||||||| | |||  ||    ||| |||||||||| |||| |||||||||||| ||||||| ||    
T  29076325 ggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaattacttgt 29076424  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  |||||||||| |||  |||||||||||||    
T  29076425 gtgccacagccttatgcaacgtgggaacaacaattctc 29076462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 29109858 - 29109995
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||  ||||||||||||||| | |||  ||    ||| |||||||||| |||| |||||||||||| ||||||| ||    
T  29109858 ggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaattacttgt 29109957  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  |||||||||| |||  |||||||||||||    
T  29109958 gtgccacagccttatgcaacgtgggaacaacaattctc 29109995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 29111298 - 29111435
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||||||||||||  ||||||||||||||| | |||  ||    ||| |||||||||| |||| |||||||||||| ||||||| ||    
T  29111298 ggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaattacttgt 29111397  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | |  |||||||||| |||  |||||||||||||    
T  29111398 gtgccacagccttatgcaacgtgggaacaacaattctc 29111435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 139
Target Start/End: Original strand, 23986011 - 23986098
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatg 139  Q
    |||||||||||| || ||||||||||||||||||||||||||| | |  |||||||||||||  ||||| || ||||||  |||||||    
T  23986011 cagttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttacttgtgtgtctcagccttatg 23986098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 7537240 - 7537170
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||||||| |||||| |||| |||| || ||||||| |||  |||||||||||||||||||||||    
T  7537240 agttaactgcagccggttttttaattcctcgacaattaactgccgagggggcaaaaacgtaaattactcgt 7537170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 2258366 - 2258309
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcga 98  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||||||||| ||| ||||    
T  2258366 gtttttctcgatagttaactgcagccagtttttgaatttttcggcagttgactatcga 2258309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 28362734 - 28362803
Alignment:
Q  25 gcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||| | |||||||||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  28362734 gcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 28362803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 161
Target Start/End: Original strand, 2052615 - 2052721
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    |||||||||||||| | |||  |||| |||| |||||||||| |||  || |||||||||||||||||||| || || || ||||| ||||||| |||||    
T  2052615 agttaactgcagcc-gatttcaaattcctcgacagttaactgccgaggggacaaaaacgtaaattactcgtgtgcct-cagcttatacaatgtgccaaca 2052712  T
Q  153 acaattctc 161  Q
    |||||||||    
T  2052713 acaattctc 2052721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 22305179 - 22305103
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||| |||||||||||||||| ||||||||||||||| | ||||| ||  | |||||||||||||| ||||    
T  22305179 ggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaa 22305103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 29065782 - 29065674
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    |||||||||||||| | |||  |||| ||||||||||||||| |||  ||||||||| ||||||||||||| || | |  ||||||  ||||||  ||||    
T  29065782 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29065683  T
Q  153 acaattctc 161  Q
    |||||||||    
T  29065682 acaattctc 29065674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 29074795 - 29074687
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    |||||||||||||| | |||  |||| ||||||||||||||| |||  ||||||||| ||||||||||||| || | |  ||||||  ||||||  ||||    
T  29074795 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29074696  T
Q  153 acaattctc 161  Q
    |||||||||    
T  29074695 acaattctc 29074687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 29079559 - 29079451
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    |||||||||||||| | |||  |||| ||||||||||||||| |||  ||||||||| ||||||||||||| || | |  ||||||  ||||||  ||||    
T  29079559 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29079460  T
Q  153 acaattctc 161  Q
    |||||||||    
T  29079459 acaattctc 29079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 29107368 - 29107260
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    |||||||||||||| | |||  |||| ||||||||||||||| |||  ||||||||| ||||||||||||| || | |  ||||||  ||||||  ||||    
T  29107368 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29107269  T
Q  153 acaattctc 161  Q
    |||||||||    
T  29107268 acaattctc 29107260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 35021282 - 35021402
Alignment:
Q  41 gttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgc 140  Q
    |||||||||| ||||||||||||||| |||||||||||  || ||| ||||||| |||  ||||||||  |||  |||||||| | ||||  || |||      
T  35021282 gttttcctcggcagttaactgcagccggtttttgaattcttccgcatttaactgccgagggggcaaaagtgtattttactcgtgtttctcagccatataa 35021381  T
Q  141 aatgtgtcaacaacaattctc 161  Q
    ||||||||||||| |||||||    
T  35021382 aatgtgtcaacaataattctc 35021402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 24088790 - 24088844
Alignment:
Q  26 cagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttct 81  Q
    |||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||    
T  24088790 cagttaactaccgagattttcctcgacagttaactgtagcc-gtttttgaatttct 24088844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 6204898 - 6204856
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  6204898 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 6204856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 11691865 - 11691823
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  11691865 ggcagttaactaccgaggttttcctcggcagttaactgcagcc 11691823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 13479769 - 13479663
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    ||||||||||||||  ||||||||||| | || |||||||||  |||  |||||||| ||||  ||||| || || |||  ||||||| |||||||||||    
T  13479769 cagttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaac 13479670  T
Q  152 aacaatt 158  Q
    |||||||    
T  13479669 aacaatt 13479663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 13401529 - 13401420
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    |||||||||||||||  ||||| |||| ||||||||||||||| |||  |||||||| | ||  | |||||| |  ||| |||||||  |||||||||||    
T  13401529 cagttaactgcagccgattttttaattcctcggcagttaactgccgagggggcaaaagcatatttaactcgtgttactcaaccttataaaatgtgtcaac 13401430  T
Q  152 aacaattctc 161  Q
    | ||||||||    
T  13401429 atcaattctc 13401420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 161
Target Start/End: Complemental strand, 29061338 - 29061230
Alignment:
Q  53 agttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaaca 152  Q
    ||||||||||||||   |||  |||| ||||||||||||||| |||  ||||||||| ||||||||||||| || | |  ||||||| ||||||  ||||    
T  29061338 agttaactgcagccgaatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatgtaatgtgggaaca 29061239  T
Q  153 acaattctc 161  Q
     ||||||||    
T  29061238 ccaattctc 29061230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 9049086 - 9049161
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||| ||||| ||||||||||  |||||||||||||| ||||||  |    |||||||||||||||||||    
T  9049086 ggcagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgtcgaa 9049161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 13382700 - 13382653
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  13382700 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 13382653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 24218059 - 24218020
Alignment:
Q  55 ttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||| || ||||||||||||||||||||||||||||||    
T  24218059 ttaactacaaccagtttttgaatttctcggcagttaactg 24218020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 8193211 - 8193281
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    ||||||||||   ||| |||||||||| |||||||||||||||   |||| |||| |||||||||||||||    
T  8193211 ggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactg 8193281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 18351645 - 18351683
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  18351645 ggcagttaactaccgaggttttcctcggcagttaactgc 18351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 26712119 - 26712081
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  26712119 ggcagttaactaccgaggttttcctcggcagttaactgc 26712081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 28249956 - 28249918
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  28249956 ggcagttaactaccgaggttttcctcggcagttaactgc 28249918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 73
Target Start/End: Complemental strand, 9048146 - 9048097
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttttt 73  Q
    |||||||||| ||||| ||||||||||  |||||||||||||| ||||||    
T  9048146 ggcagttaactaccgaagttttcctcggtagttaactgcagccggttttt 9048097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 30258317 - 30258358
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagc 65  Q
    ||||||||||  ||||| ||||||||||||||||||||||||    
T  30258317 ggcagttaactgccgagattttcctcgacagttaactgcagc 30258358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 54; Significance: 2e-21; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 1183 - 1319
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    ||||||||||  ||||||||||||||| ||||||| ||| ||| ||||   |||| ||||||||||||||| |||  || ||||||||||||||||||||    
T  1183 ggcagttaacttccgaggttttcctcggcagttaattgctgccggtttca-aattcctcggcagttaactgccgaggggacaaaaacgtaaattactcgt 1281  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || |||  ||||||||||||||||| || ||||||||    
T  1282 gtgcctcagccttatgcaatgtgtcagcagcaattctc 1319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 18099 - 18003
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||  |||||| ||| |||| ||||||||||||||| | |||  |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  18099 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgt 18003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 54745 - 54841
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||  |||||| ||| |||| ||||||||||||||| | |||  |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  54745 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgt 54841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 3951 - 3820
Alignment:
Q  29 ttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtc 128  Q
    ||||| |||||||||||||||| |||||||||||||||  |||||||||| |||| |||||||||| |||  || ||||||  ||  ||||| || || |    
T  3951 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaaa-atattttacttgtgtgcc 3853  T
Q  129 tccaccttatgcaatgtgtcaacaacaattctc 161  Q
    || ||||||| |||| |||||||| ||||||||    
T  3852 tcaaccttatccaatttgtcaacatcaattctc 3820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Original strand, 7306 - 7444
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| ||||||||||| |||| ||||| | ||||||| ||||||||||| ||| ||| ||||||||| |   ||||||||| ||  |||||| |    
T  7306 ggcagttaactaccgaggtttttctcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaaggaggcaaaaacatattttactcat 7405  T
Q  124 atgtctccaccttatgcaatgtgtcaac-aacaattctc 161  Q
     || ||| |||||||| ||| ||||||| ||||||||||    
T  7406 gtgcctcaaccttatgaaatttgtcaactaacaattctc 7444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 25943 - 25886
Alignment:
Q  104 caaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||| ||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  25943 caaaaacataaattactcgtatgcctcagccttatgcaatgtgtcaacaacaattctc 25886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 1724 - 1784
Alignment:
Q  101 gggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||||||||||||||||||||| || |||  |||||||||||||||||||| ||||||||    
T  1724 gggcaaaaacgtaaattactcgtgtgcctcagccttatgcaatgtgtcaacatcaattctc 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 439 - 573
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatg 126  Q
    |||||||  ||||||||||||||||||||||||||||||| | || | ||||  |||||||||||||| |||  | |||||| ||||  |||||||| |     
T  439 agttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtattttactcgtgtt 538  T
Q  127 tctccaccttatgcaatgtgtcaacaacaattctc 161  Q
    ||||   |||||  ||||||| |||| ||||||||    
T  539 tctcagtcttatcaaatgtgtaaacatcaattctc 573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 17353 - 17423
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||||| |||||||| ||||||||||||||| | |||  |||| |||||||||||||||    
T  17353 ggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactg 17423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 161
Target Start/End: Original strand, 15960 - 16094
Alignment:
Q  27 agttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatg 126  Q
    ||||||| |||||||||||||||| ||||||||||||||  | |||  |||| ||||||||||||||| |||  | |||||   ||||| ||||||| ||    
T  15960 agttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgagggagcaaatgagtaaaatactcgtgtg 16059  T
Q  127 tctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     | | |||||||| || |||| |||| ||||||||    
T  16060 gcacaaccttatgtaaagtgtaaacagcaattctc 16094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 22474 - 22337
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||||||| |||||| ||||||||  |||||||||||||||   |||  |||| ||||||||||||||| |||  ||||||||  ||||| |||||||    
T  22474 ggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgt 22375  T
Q  124 atgtctccaccttatgcaatgtgtcaacaacaattctc 161  Q
     || | | |||||||| || |||| || | ||||||||    
T  22374 gtgacacaaccttatgtaaagtgtaaatagcaattctc 22337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 761 - 831
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagtttttgaatttctcggcagttaactg 94  Q
    |||||||||| ||||| |||||||| |  ||||||| |||||| |||| |||||| |||||||||||||||    
T  761 ggcagttaactaccgaagttttcctaggtagttaacagcagccggtttatgaattcctcggcagttaactg 831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 158
Target Start/End: Original strand, 11740 - 11846
Alignment:
Q  52 cagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgtatgtctccaccttatgcaatgtgtcaac 151  Q
    ||||||||||||||| |||||||||||  || ||||||||||| |||| ||||||||  |||  ||||| || | |||| | |||||  |||||||||||    
T  11740 cagttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtattttacttgtgtatctcaatcttataaaatgtgtcaac 11839  T
Q  152 aacaatt 158  Q
    | |||||    
T  11840 agcaatt 11846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 872 - 794
Alignment:
Q  45 tcctcgacagttaactgcagccagtttttgaatttctcggcagttaactgtcgaatgggcaaaaacgtaaattactcgt 123  Q
    |||||| ||||||||||||||| | |||  ||||  ||||||||||| |  |||| |||||||||||||||||||||||    
T  872 tcctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgt 794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 36536 - 36612
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccag-tttttgaatttctcggcagttaactgtcgaa 99  Q
    |||||||||| |||||||||||||||| ||||||| ||||||| | ||||| ||  | |||||||||||||| ||||    
T  36536 ggcagttaactaccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccgaa 36612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0794 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 5342 - 5295
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| ||||||||||||||||  |||||||||||||| ||||    
T  5342 ggcagttaactaccgaggttttcctcggtagttaactgcagccggttt 5295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Original strand, 425 - 472
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  425 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 71
Target Start/End: Complemental strand, 5402 - 5355
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagccagttt 71  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||||    
T  5402 ggcagttaactaccgaggttttcctcggcagttaactgccgccggttt 5355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 902 - 860
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| ||||||||| |||||    
T  902 ggcagttaactaccgaggttttcctcggcagttaactacagcc 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 12390 - 12432
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||| ||| |||||||||||||||    
T  12390 ggcagttaactaccgaggttttcatcggcagttaactgcagcc 12432  T

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Target: scaffold0065 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 65389 - 65347
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    ||||||||||  |||| ||||||||||||||||||||||||||    
T  65389 ggcagttaactgccgaagttttcctcgacagttaactgcagcc 65347  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 50118 - 50080
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgc 62  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  50118 ggcagttaactaccgaggttttcctcggcagttaactgc 50080  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 232834 - 232876
Alignment:
Q  24 ggcagttaacaaccgaggttttcctcgacagttaactgcagcc 66  Q
    |||||||||| |||||||||||||||| ||||||| |||||||    
T  232834 ggcagttaactaccgaggttttcctcggcagttaattgcagcc 232876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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