View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8078_low_5 (Length: 236)
Name: NF8078_low_5
Description: NF8078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8078_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 42879096 - 42879294
Alignment:
| Q |
19 |
atgtacatagtccatagaggtttgaaattgaatgataatactattactacatagcagatgcatttgatattgatgatcgtatctggtgagtttggttggc |
118 |
Q |
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| T |
42879096 |
atgtacatagtccatagaggtttgaaattgaatgataatactattactacatagcagatgcatttgatattgatgatcgtatctggtgagtttggttggc |
42879195 |
T |
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| Q |
119 |
aacttggcacatgaaattgatccgttaatggcgtttgaatgctgcactctgatccgtaagagtaatcaaggctaaagtaacagaggcccctgtcgagtt |
217 |
Q |
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| T |
42879196 |
aacttggcacatgaaattgatccgttaatggcgtttgaatgctgcactctgatccgtaagagtaatcaaagctaaagtaacagaggcccctgtcgagtt |
42879294 |
T |
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