View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8081_low_20 (Length: 248)
Name: NF8081_low_20
Description: NF8081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8081_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 37696524 - 37696732
Alignment:
| Q |
20 |
acatcctcataccctataacctccatttcatacaccacttccactctaatactcacaccaccctacatgtctacttgcactaccatgcaaacctcaccaa |
119 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37696524 |
acatcctcataccctataacctccatttcatacaccacttccactctaatactcacaccaccctacatgtctacttgcactaccatgcaaacctcaccaa |
37696623 |
T |
|
| Q |
120 |
actttggcatagatttaactgcaccattccaaatatcttcctccactttcatcctcctctattgccaagtaaaaagttcaaccatttgtgacacttcttt |
219 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
37696624 |
actttggcatagatttaactgcaccattccaaatatcttcctccactttcatcctcctccattgccaagtaaaaagttcaaccatttgtgacacttcttt |
37696723 |
T |
|
| Q |
220 |
tgattacct |
228 |
Q |
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||||||||| |
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| T |
37696724 |
tgattacct |
37696732 |
T |
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