View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8082_low_1 (Length: 704)
Name: NF8082_low_1
Description: NF8082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8082_low_1 |
 | |
|
| [»] chr4 (14 HSPs) |
| |
|
| [»] chr5 (1 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 452; Significance: 0; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 452; E-Value: 0
Query Start/End: Original strand, 14 - 704
Target Start/End: Complemental strand, 3801559 - 3800871
Alignment:
| Q |
14 |
aatattcatagaaggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggt |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
3801559 |
aatattcatagaaggattggccgtatgaaggttcttattgatcttgatgatattaaggaagaaggtctgctagagatgttatttggaactcttgattggt |
3801460 |
T |
|
| Q |
114 |
ttcaatctgatagtagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaa |
213 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||| |||| |||||| ||||||| |||||||||||| | |
|
|
| T |
3801459 |
ttcaatctgatagtagaataattgtaacaagtagagataagcaagtacttattcctaatgaagtgtatgacgatgatctatatgaggttggggtattgga |
3801360 |
T |
|
| Q |
214 |
ttctagcgaagcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgcc |
313 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3801359 |
ttctagtgaagcacttgagcttttcaatttgaatgcctttaaacaaagtcatcctgaaatggagtactatgagctatcaaagagggtgatcgaatatgcc |
3801260 |
T |
|
| Q |
314 |
aaaggagttccattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaa |
413 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| | ||| |||| ||||||||||| ||||||| ||| |||||| | |||| |
|
|
| T |
3801259 |
aaaggagttccattagttcttaaagttttggctcatatgcttcgtggaaaatgtaaagaagtatgggaaagtctgctagacaaacttaaaagactgccaa |
3801160 |
T |
|
| Q |
414 |
ttcaagaagttgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaa |
513 |
Q |
| |
|
||||||||||| || | ||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
3801159 |
ttcaagaagttcatgatgtaatgagactcagttatgatgatcttgatcatttagagaaaaagtattttttagatattgcatgtttcttcaatgggttgaa |
3801060 |
T |
|
| Q |
514 |
tttgaaagtggattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataact |
613 |
Q |
| |
|
|||||||||||||||||||||| |||| ||| ||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||| |
|
|
| T |
3801059 |
tttgaaagtggattacatgaaaattttactgaaagattgtgaaagtgataattcagtggctgttgggttagaaaggttaaaagataaagctcttataact |
3800960 |
T |
|
| Q |
614 |
atttctgaatataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccctagaa |
704 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3800959 |
atttct--cgataatgttatatctatgcatgacattctatgagaaatgggtcgggaggttgttcgccaagaatatagtgaagaccctagaa |
3800871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 408; E-Value: 0
Query Start/End: Original strand, 14 - 702
Target Start/End: Complemental strand, 4218616 - 4217925
Alignment:
| Q |
14 |
aatattcatagaaggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggt |
113 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
4218616 |
aatattcatagaaggattgaccgtatgaaggttcttattgttcttgatgatattaaggaagaaggtctgctagagatgttatttggaactcttgattggt |
4218517 |
T |
|
| Q |
114 |
ttcaatctgatagtagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaa |
213 |
Q |
| |
|
||| ||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4218516 |
ttcgatccgatagtagaatcattgtaacatctagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaa |
4218417 |
T |
|
| Q |
214 |
ttctagcgaagcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgcc |
313 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| || |||||||||| |||| |||| |||||| |
|
|
| T |
4218416 |
ttctagcgatgcacttgcgcttttcaatttgaatgcctttaaagaaagtcatcttgaaattaagtactacgatctatcaaagaaggtggtcgattatgcc |
4218317 |
T |
|
| Q |
314 |
aaaggagttccattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaa----tgggaaagtcgactagacagactgaaaagaata |
409 |
Q |
| |
|
|||||| |||||||||||||||||||||| | ||||||| ||||||||| |||||| ||||| |||| || |||||| | |||| ||| | | |
|
|
| T |
4218316 |
aaaggaattccattagttcttaaagttttgggtcatatgtttcgtggaaaacataa-taagaaaacgtgggtttatcaactagaaaaactggaaaaagtg |
4218218 |
T |
|
| Q |
410 |
ccaattcaagaagttgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggat |
509 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
4218217 |
ccaattcaagaaattgataaagtaatgagactcagttatgatgatcttgatctcttagagcaaaagtattttttagatattgcatgtttcttcaatgggt |
4218118 |
T |
|
| Q |
510 |
tgaatttgaaagtggattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcat |
609 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||| |||| ||||||||||||| ||||||||||||| || |
|
|
| T |
4218117 |
tgaatttgaaagtggattacatgaaacttttattgaaagattatgaaagtgataattcagtggccgttgggttagaaaggttgaaagataaagctcttat |
4218018 |
T |
|
| Q |
610 |
aactatttctgaatataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccctag |
702 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||| || ||| | ||||| |||||||||||||| | ||||| || | |||||||||| |
|
|
| T |
4218017 |
tactatttctgaagataatgtaatatctatgcatgactttcaacaaaagatgggtcgggaggttgttcgcctagaatctattaaagaccctag |
4217925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 27 - 700
Target Start/End: Original strand, 3919908 - 3920581
Alignment:
| Q |
27 |
ggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtttcaatctgatag |
126 |
Q |
| |
|
||||| |||| |||||||||||||| |||||||||||| | |||| | ||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3919908 |
ggattagccgcatgaaggttcttatcgttcttgatgatgtcaaggagacagatcagctcgagatgttatttggaactcttgattggtttcaatctgatag |
3920007 |
T |
|
| Q |
127 |
tagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagcgaagca |
226 |
Q |
| |
|
|||||||||| ||| | | ||||||||||||||||| | |||||||||||||| |||||| | ||||||| ||| |||||||| ||||||| |||||| |
|
|
| T |
3920008 |
tagaataattctaacatccagagataagcaagtactaaggactaatgaagttgatcatgatggtctatatgaggttagggtattggattctagtgaagca |
3920107 |
T |
|
| Q |
227 |
cttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttccat |
326 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3920108 |
cttgagcttttcaatttgaatgcctttaaacaaagtcatcctgaaatggagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttccat |
3920207 |
T |
|
| Q |
327 |
tagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaagttga |
426 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | | || |||| ||||||||||| ||||||| ||| |||||| | ||| ||||| ||||| | |
|
|
| T |
3920208 |
tagttcttaaagttttggctcatatgcttcgtggaaaaaacaaagaagtatgggaaagtcagctagacaaacttaaaagactgccagttcaaaaagttca |
3920307 |
T |
|
| Q |
427 |
taaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagtggat |
526 |
Q |
| |
|
| | ||| ||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
3920308 |
tgatgtagtgaaactcagttatgatgatcttgatcgtttagagaaaaagtattttttagatattgcatgtttcttcaatgggttgaatttgaaagtggat |
3920407 |
T |
|
| Q |
527 |
tacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaatata |
626 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||| ||||||| || ||||||||| ||| ||||||||||||| ||||||||||||||| ||| |
|
|
| T |
3920408 |
tacatgaaacatttattgaaagattgtgatagtgataattacgtggctggtgggttagaaagcttgaaagataaagctcttataactatttctgaagata |
3920507 |
T |
|
| Q |
627 |
atgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccct |
700 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| ||| ||| ||||| |
|
|
| T |
3920508 |
atgttatatctatgcatgacattctacaagaaatgggtcgggaggtagttcgccaagaatctagagaacaccct |
3920581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 27 - 693
Target Start/End: Original strand, 3933132 - 3933798
Alignment:
| Q |
27 |
ggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtttcaatctgatag |
126 |
Q |
| |
|
|||| ||||| ||||| ||||||||||||||||||||| | | |||| |||||||||| ||||||||||||| ||||||||||||||| || ||||| |
|
|
| T |
3933132 |
ggatcggccgcatgaaagttcttattgttcttgatgatgtcaatgaaacagatctgctagagatgttatttggatctcttgattggtttcgattagatag |
3933231 |
T |
|
| Q |
127 |
tagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagcgaagca |
226 |
Q |
| |
|
|||||||||||||| | |||| |||||||||| ||| || | |||||||||||| |||||||| ||| ||| ||| |||||||| ||||||| |||||| |
|
|
| T |
3933232 |
tagaataattgtaaccagtagaaataagcaagtgcttgttaccaatgaagttgataatgatgatctatgtgaggttagggtattggattctagtgaagca |
3933331 |
T |
|
| Q |
227 |
cttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttccat |
326 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3933332 |
cttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgagctatcagagagggtgatcgaatatgccaaaggagttccat |
3933431 |
T |
|
| Q |
327 |
tagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaagttga |
426 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| | ||| |||| |||||||||| ||||||| ||| |||||| | ||||||| | ||||| | |
|
|
| T |
3933432 |
tagttcttaaagttttggctcatatgcttcgtggaaaatgtaaagaagtatgggaaagtaagctagacaaacttaaaagactgccaattccaaaagttca |
3933531 |
T |
|
| Q |
427 |
taaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagtggat |
526 |
Q |
| |
|
| | |||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||| || ||||| |
|
|
| T |
3933532 |
tgatgtaatgaggcttagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaatgggttggatttggaattggat |
3933631 |
T |
|
| Q |
527 |
tacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaatata |
626 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||| ||||||| || |||||||| |||| ||||||||||||| ||||||||||||||| ||| |
|
|
| T |
3933632 |
tacatgaaacatttattgaaagattgtgatagtgataattacgtggctggtgggttagaaacgttgaaagataaagctcttataactatttctgaagata |
3933731 |
T |
|
| Q |
627 |
atgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtga |
693 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||| |||||| |
|
|
| T |
3933732 |
atgttatatctatgcatgacattcttcaagaaatgggttgggaggttgttcggcaagaatctagtga |
3933798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 23 - 701
Target Start/End: Complemental strand, 4009960 - 4009282
Alignment:
| Q |
23 |
agaaggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtttcaatctg |
122 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| || ||||| ||| || |||| |||||||||| |||||||||||||||||| ||| | |
|
|
| T |
4009960 |
agaaggattggtcgtatgaaggttcttattgttcttgatgatgttaaggaagaaggtcagctagagatgttatttagaactcttgattggtttcgatccg |
4009861 |
T |
|
| Q |
123 |
atagtagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagcga |
222 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||| ||||||| || |
|
|
| T |
4009860 |
atagtagaataattttaacaactagagataagcaagtacttattgctaatgaagttgaagatgatgatctatatcaggttggggtattggattctagtga |
4009761 |
T |
|
| Q |
223 |
agcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagtt |
322 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||| |||| |||||||||||| || |
|
|
| T |
4009760 |
agcacttgagcttttcaatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgatctatcaaagaaagtggtcgattatgccaaaggaatt |
4009661 |
T |
|
| Q |
323 |
ccattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaag |
422 |
Q |
| |
|
|||||||||||| ||||||| |||||| | |||||||||| | | ||||||||||||||||||| || |||| ||| |||||| | || | | || || |
|
|
| T |
4009660 |
ccattagttcttgaagttttggctcatctacttcgtggaaaagacaaggaagaatgggaaagtcagctggacaaacttaaaagactgccgaataaaaaaa |
4009561 |
T |
|
| Q |
423 |
ttgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagt |
522 |
Q |
| |
|
|| | | |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||| |||||||| |
|
|
| T |
4009560 |
ttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaacgggttgaggttgaaagt |
4009461 |
T |
|
| Q |
523 |
ggattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaa |
622 |
Q |
| |
|
||||| |||||||| |||||||| ||||| ||| ||||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||| ||||||||| |
|
|
| T |
4009460 |
ggattgcatgaaacttttattgaaagattttgaaagtgataatgcagtggctattgggttagaaaggttaaaagataaagctcttataacaatttctgaa |
4009361 |
T |
|
| Q |
623 |
tataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagacccta |
701 |
Q |
| |
|
||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||| |||||| ||||||||| |||| |
|
|
| T |
4009360 |
gataatgtaatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgttaagaatctagtgaagatccta |
4009282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 27 - 693
Target Start/End: Complemental strand, 3817556 - 3816890
Alignment:
| Q |
27 |
ggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtttcaatctgatag |
126 |
Q |
| |
|
||||| |||| |||||||||||||| |||||||||||| | |||| | ||||| ||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3817556 |
ggattagccgcatgaaggttcttatcgttcttgatgatgtcaaggagacagatcagctcgagatgttatttggaactcttgattggtttcaatctgatag |
3817457 |
T |
|
| Q |
127 |
tagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagcgaagca |
226 |
Q |
| |
|
|||||||||| ||| | | ||||||||||||||||| | |||||||||||| ||||||||| ||||||| |||||||||||| ||||||| |||||| |
|
|
| T |
3817456 |
tagaataattctaacatccagagataagcaagtactaaggaataatgaagttgaagatgatgatatatatgaggttggggtattggattctagtgaagca |
3817357 |
T |
|
| Q |
227 |
cttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttccat |
326 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| || | ||||||||||| |||| | |
|
|
| T |
3817356 |
cttgtgcttttcaattcgaatgcctttaaacaaagtcatcttgaaatggagtactatgagctatcaaagagtgtggtcaattatgccaaagggattccgt |
3817257 |
T |
|
| Q |
327 |
tagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaagttga |
426 |
Q |
| |
|
|||||||||| ||||| ||||||||||||||||||| | | || |||| ||||||||||| ||||||| ||| | |||| | ||| ||||| ||||| | |
|
|
| T |
3817256 |
tagttcttaaggttttagctcatatgcttcgtggaaaaaagaaagaagtatgggaaagtcagctagacaaacttagaagactgccagttcaaaaagttta |
3817157 |
T |
|
| Q |
427 |
taaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagtggat |
526 |
Q |
| |
|
| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| |
|
|
| T |
3817156 |
tgatgcaatgagactcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaatgggttggatttgaaagtggat |
3817057 |
T |
|
| Q |
527 |
tacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaatata |
626 |
Q |
| |
|
||||||||||||||||||| ||||| ||| |||||||||| ||||||| || |||||||| |||| ||||||||||||| ||||||||||||||| ||| |
|
|
| T |
3817056 |
tacatgaaacatttattgaaagattgtgatagtgataattacgtggctggtgggttagaaacgttgaaagataaagctcttataactatttctgaagata |
3816957 |
T |
|
| Q |
627 |
atgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtga |
693 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||||| |||||| |
|
|
| T |
3816956 |
atgttatatctatgcatgacattcttcaagaaatgggttgggagattgttcggcaagaatctagtga |
3816890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 23 - 704
Target Start/End: Complemental strand, 4025190 - 4024515
Alignment:
| Q |
23 |
agaaggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtttcaatctg |
122 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| || ||||| ||| || | || ||||||||||||||| ||||||||| ||| ||||| |
|
|
| T |
4025190 |
agaaggattggccgtatgaaggtccttattgttcttgatgacgttaaggaagaaggtcagatagagatgttatttggaacacttgattggcttctatctg |
4025091 |
T |
|
| Q |
123 |
atagtagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagcga |
222 |
Q |
| |
|
||||||| |||||||| | ||||||||| | ||||||||||||| ||||||||||||| ||| ||||||| |||||||||||| ||||||| || |
|
|
| T |
4025090 |
atagtaggataattgtcacaactagagacatgcaagtacttatttgtaatgaagttgatcatg------tatatgaggttggggtattggattctagtga |
4024997 |
T |
|
| Q |
223 |
agcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagtt |
322 |
Q |
| |
|
|||||||| ||||||||| |||||||| ||||||||| |||||||||||| | ||||| |||||||||||||| ||||||||| |||||||||||| || |
|
|
| T |
4024996 |
agcacttgagcttttcaacttgaatgcatttaaacaacgtcatcttgaaacggtgtactttgagctatcaaagaaggtgatcgattatgccaaaggaatt |
4024897 |
T |
|
| Q |
323 |
ccattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaag |
422 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||| | |||| |||| ||||||||||| ||||||| ||| |||||| | ||| ||||| ||| |
|
|
| T |
4024896 |
ccattagttcttaaagttttggctcatatgcttcgtggaaaaaataaagaagtatgggaaagtcagctagacaaacttaaaagactgccagttcaaaaag |
4024797 |
T |
|
| Q |
423 |
ttgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagt |
522 |
Q |
| |
|
|| || | ||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
4024796 |
ttcatgatgtaatgagactaagttatgatgatcttgatcgtttagagaaaaagtattttttagatattgcatgtttcttcaacgggttgaatttgaaagt |
4024697 |
T |
|
| Q |
523 |
ggattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaa |
622 |
Q |
| |
|
|||||||||||||| |||||||| ||||| ||| || ||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
4024696 |
ggattacatgaaacttttattgaaagattgtgaaagcgataattcagtggctgttggtttagaaaggttgagagataaagctcttataactatttctgaa |
4024597 |
T |
|
| Q |
623 |
tataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccctagaa |
704 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||| ||||| ||||||||||| |
|
|
| T |
4024596 |
gataatattatatctatgcatgacattctacaagaaatgggtcgggaggttgttcgccaagaatctagtgcagaccctagaa |
4024515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 92 - 704
Target Start/End: Original strand, 3955723 - 3956329
Alignment:
| Q |
92 |
ttatttggaactcttgattggtttcaatctgatagtagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatg |
191 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
3955723 |
ttatttggaactcttgattggtttcgatctgatagtagaataattgtaacaattagagacaagcaagtacttattactaatgaagttgatgata------ |
3955816 |
T |
|
| Q |
192 |
tatatgaagttggggtattgaattctagcgaagcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatc |
291 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| || |
|
|
| T |
3955817 |
tatatgaagttggggtactgaattatagcgaagcacttgagcttttcaatttgaatgcctttaatcaaagtcatcttgaaatggagtactatgagctttc |
3955916 |
T |
|
| Q |
292 |
aaagagggtgatcgaatatgccaaaggagttccattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgacta |
391 |
Q |
| |
|
||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||| |||||||||||| | | ||||||||||||||||||| || |
|
|
| T |
3955917 |
aaagaaggtgatcgattatgccaaaggaattccattagttcttaaagttttggctcatctgcttcgtggaaaagacaaggaagaatgggaaagtcagctg |
3956016 |
T |
|
| Q |
392 |
gacagactgaaaagaataccaattcaagaagttgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattg |
491 |
Q |
| |
|
|||| ||| |||||| | |||| | || || || | | |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3956017 |
gacaaacttaaaagactgccaaataaaaaatttcaagatgtaatgaggctcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattg |
3956116 |
T |
|
| Q |
492 |
catgttttttcaatggattgaatttgaaagtggattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggtt |
591 |
Q |
| |
|
||||||| ||||| || |||| |||||||||||||||||||||| |||||||| ||||| ||| ||||||||| |||||||||||| ||||||||||| |
|
|
| T |
3956117 |
catgtttcttcaacgggttgaggttgaaagtggattacatgaaacttttattgaaagattttgaaagtgataatgcagtggctgttggtttagaaaggtt |
3956216 |
T |
|
| Q |
592 |
gcaagataaagctctcataactatttctgaatataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagt |
691 |
Q |
| |
|
| |||||||| |||| ||||| ||||||||| ||||||||||||| |||||||||||| | ||||||||||| |||||||||||||| ||||||| ||| |
|
|
| T |
3956217 |
gaaagataaatctcttataacaatttctgaagataatgttatatccatgcatgacattctacaagaaatgggtcgggaggttgttcgccaagaatccagt |
3956316 |
T |
|
| Q |
692 |
gaagaccctagaa |
704 |
Q |
| |
|
||||||||||||| |
|
|
| T |
3956317 |
gaagaccctagaa |
3956329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 29 - 699
Target Start/End: Complemental strand, 3986953 - 3986283
Alignment:
| Q |
29 |
attggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtttcaatctgatagta |
128 |
Q |
| |
|
||||| || |||||||||||||| ||||||||||| || |||| |||||| |||| ||||||||| | ||||||||| ||||||||||| ||||||| |
|
|
| T |
3986953 |
attggacgcatgaaggttcttatcattcttgatgatgttaaggacgaagatcagctagagatgttattcgaaactcttgactggtttcaatcagatagta |
3986854 |
T |
|
| Q |
129 |
gaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagcgaagcact |
228 |
Q |
| |
|
|||||||| ||| | | |||||||||||||||||| ||| |||||||||||| ||||||||| |||||| |||||||||||| ||||||| || ||||| |
|
|
| T |
3986853 |
gaataattctaacagccagagataagcaagtactttttgataatgaagttgacgatgatgatcgatatgaggttggggtattggattctagtgatgcact |
3986754 |
T |
|
| Q |
229 |
tgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttccatta |
328 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||| || | |||||||||||| ||||||| |
|
|
| T |
3986753 |
tgcacttttcaatttgaatgcctttaaacaaagtcatcttgaaactgagtttgatgaaatatcaaagagggtggtcaattatgccaaaggaaatccatta |
3986654 |
T |
|
| Q |
329 |
gttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaagttgata |
428 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| | | || |||| ||||||||||| ||||||| ||| |||||| | ||| || || ||||| || |
|
|
| T |
3986653 |
gttcttaaagttttggctcatatgcttcgtggaaaaaacaaagaagtatgggaaagtcagctagacaaacttaaaagactgccagttaaaaaagttcatg |
3986554 |
T |
|
| Q |
429 |
aagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagtggatta |
528 |
Q |
| |
|
| ||| ||| ||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||| |
|
|
| T |
3986553 |
atgtagtgaaactcagttacgatgatcttgatcgtttagagaaaaagtattttttagatattgcatgtttcttcaatgggttgagtttgaaagtggatta |
3986454 |
T |
|
| Q |
529 |
catgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaatataat |
628 |
Q |
| |
|
|||||||| |||||||| ||||| ||| ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3986453 |
catgaaacttttattgaaagattgtgaaggtgataattcagtggctgttgggatagaaaggttgaaagataaagctctcataactatttctgaagataat |
3986354 |
T |
|
| Q |
629 |
gttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccc |
699 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||| ||||||| |||| |
|
|
| T |
3986353 |
gttatatctatgcatgacattcttcaagaaatgggtcgggaggttgttcgccaagaatctagtgaataccc |
3986283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 341; E-Value: 0
Query Start/End: Original strand, 15 - 702
Target Start/End: Complemental strand, 4002271 - 4001591
Alignment:
| Q |
15 |
atattcatagaaggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtt |
114 |
Q |
| |
|
||||||| || | ||||||||||||||||||||||||||||||||||||| || ||||| ||| || || ||||||||||||||||||||||||||| |
|
|
| T |
4002271 |
atattcagaggatgattggccgtatgaaggttcttattgttcttgatgatgttaaggaagaaggtcaaatagagatgttatttggaactcttgattggtt |
4002172 |
T |
|
| Q |
115 |
tcaatctgatagtagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaat |
214 |
Q |
| |
|
|| ||| |||||||| |||||||||| |||||||| ||||||||||||||| |||||||||||||| |||| |||||||||||||||| ||||| |
|
|
| T |
4002171 |
tcgatccgatagtaggataattgtaacgactagagacaagcaagtacttattactaatgaagttgat-----tgatatatatgaagttggggtgttgaaa |
4002077 |
T |
|
| Q |
215 |
tctagcgaagcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgcca |
314 |
Q |
| |
|
|||| || ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | | ||||| | |
|
|
| T |
4002076 |
cctagtgaggcacttgagctttttcatttgaatgcctttaaacaaagtcatcttgaaatggagtactatgagctatcaaagagggtggttgcgtatgcaa |
4001977 |
T |
|
| Q |
315 |
aaggagttccattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaat |
414 |
Q |
| |
|
||||| ||||||||| | |||||||||| |||||| | |||||||||| | |||||||| ||||||||||| || || | ||| |||| | | |||| |
|
|
| T |
4001976 |
aaggaattccattaggtgttaaagttttggctcatttacttcgtggaaaagttaaggaagtatgggaaagtcagcttgataaacttaaaaaacttccaag |
4001877 |
T |
|
| Q |
415 |
tcaagaagttgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaat |
514 |
Q |
| |
|
| || ||||| || | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| |
|
|
| T |
4001876 |
taaaaaagtttatgatgtaatgagactcagttatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgtttcttcaacgggttgaat |
4001777 |
T |
|
| Q |
515 |
ttgaaagtggattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataacta |
614 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||| |||| ||||| |||||||||| ||||| |||||||||||| ||||||||||||| ||||||| |
|
|
| T |
4001776 |
ttgaaagtggattacatgaaacatctattaagaga--ctgaaagtgacaattcagtggttgttggtttagaaaggttgaaagataaagctcttataacta |
4001679 |
T |
|
| Q |
615 |
tttctgaatataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccctag |
702 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||| |
|
|
| T |
4001678 |
tttcgaaatataatgttgtatctatgcatgacattttacaagaaatgggtcgggaggttgttcgccaagaatctagtgaagaccctag |
4001591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 27 - 700
Target Start/End: Complemental strand, 3809976 - 3809300
Alignment:
| Q |
27 |
ggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtttcaatctgatag |
126 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||| | ||| | ||||| ||| | |||||||||| | |||||||||||||| |||||| |
|
|
| T |
3809976 |
ggattggccgcatgaaggttcttatcgttcttgatgacgtcaagggtacagatcagctggaaaaattatttggaagttgtgattggtttcaatatgatag |
3809877 |
T |
|
| Q |
127 |
tagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatgtatatgaagttggggtattgaattctagcgaagca |
226 |
Q |
| |
|
|||||||||| ||| | | |||||||||||||||||||||||||||||||||||| | |||||| | | ||| |||||||||||| | ||| |||| | |
|
|
| T |
3809876 |
tagaataattttaacagccagagataagcaagtacttattgctaatgaagttgataaagatgatctgtttgaggttggggtattgggtcctactgaagaa |
3809777 |
T |
|
| Q |
227 |
cttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaat-ga--agtactatgagctatcaaagagggtgatcgaatatgccaaaggagttc |
323 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||||| | || ||| | ||| ||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
3809776 |
cttgagcttttcaatttgaatgcctttaaacaaagtgatcttgaagttgatcagttttgtgatgtatcaaagagggtgaccgaatatgccaaaggaattc |
3809677 |
T |
|
| Q |
324 |
cattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaagt |
423 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||| | |||| |||| ||||||||||| ||||||| ||| | |||| | ||| |||||||||| |
|
|
| T |
3809676 |
cattagttcttaaagttttggctaatatgcttcgtggaaaaaataaagaagtatgggaaagtcagctagacaaacttagaagactgccagttcaagaagt |
3809577 |
T |
|
| Q |
424 |
tgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagtg |
523 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||||| |||| ||||| |||| |
|
|
| T |
3809576 |
tgataaagtaatgagactcagttatgatgatcttgatcctttagagaagaagtattttttagatattgcatgtttcttcaatgggttgagtttgagagtg |
3809477 |
T |
|
| Q |
524 |
gattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaat |
623 |
Q |
| |
|
| |||||| | || |||||||| ||||||| ||||||||||||||||||||| || ||||||||| ||| |||| |||||||| |||||||||||||||| |
|
|
| T |
3809476 |
ggttacataacacttttattgaaagattctaacagtgataattcagtggctgctgggttagaaagcttgaaagacaaagctcttataactatttctgaat |
3809377 |
T |
|
| Q |
624 |
ataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccct |
700 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| ||||||| ||| ||| ||||| |
|
|
| T |
3809376 |
ataatgttatatctatgcatgacattctacaagaaatgggtcgggaggtagttcgccaagaatctagagaacaccct |
3809300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 225 - 686
Target Start/End: Complemental strand, 4018479 - 4018018
Alignment:
| Q |
225 |
cacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttcc |
324 |
Q |
| |
|
|||||| |||||||||||||||||| || ||| | | |||||||| |||||||||||||| ||||||||||| || | ||||||||||| |||| |
|
|
| T |
4018479 |
cacttgagcttttcaatttgaatgctttcaaagttaaggaacttgaaattgagtactatgagctaacaaagagggtggtcaattatgccaaaggcattcc |
4018380 |
T |
|
| Q |
325 |
attagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaagtt |
424 |
Q |
| |
|
|||||||||||||||||| |||||| | ||||| |||| | ||||| || ||||||||||| |||||||| || |||| ||| |||| | || ||||| |
|
|
| T |
4018379 |
attagttcttaaagttttggctcatcttcttcgcggaaaagataagctagtatgggaaagtcaactagacaagcttaaaaaaatgccaagtaaaaaagtt |
4018280 |
T |
|
| Q |
425 |
gataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagtgg |
524 |
Q |
| |
|
| | |||| |||| | | |||||||||||| ||||| |||| ||||| ||||| |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4018279 |
caagatgtaacgagattgagttatgatgatctggatcgcaaagagaaaaagattttttcagatcttgcatgttttttcaatggatcaaatttgaaagtgg |
4018180 |
T |
|
| Q |
525 |
attacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaata |
624 |
Q |
| |
|
| ||||| ||| ||| |||| ||||||||| |||||||||||||| || || ||||||||||||| ||||||||| ||| ||| || ||||| || | |
|
|
| T |
4018179 |
actacataaaatttttgttgaaagattctgaaagtgataattcagtagccagtgggttagaaaggttgaaagataaaggtcttatatctttttctaaaga |
4018080 |
T |
|
| Q |
625 |
taatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaat |
686 |
Q |
| |
|
|||||||||||| |||||||||||| | ||||||||||| |||| ||||||| ||||||| |
|
|
| T |
4018079 |
taatgttatatccatgcatgacattatacaagaaatgggtagggaaattgttcgccaagaat |
4018018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 225 - 700
Target Start/End: Original strand, 3963629 - 3964104
Alignment:
| Q |
225 |
cacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttcc |
324 |
Q |
| |
|
|||||| |||||||||||||||||| || ||| | | |||||||| ||||| |||||||||||||||||||| | | ||||||||||| |||| |
|
|
| T |
3963629 |
cacttgagcttttcaatttgaatgctttcaaaggtaaggaacttgaaattgagtacaatgagctatcaaagagggtggtgaattatgccaaaggcattcc |
3963728 |
T |
|
| Q |
325 |
attagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaataccaattcaagaagtt |
424 |
Q |
| |
|
|||||||||||||||||| || ||| | | || |||| | ||||| || ||||||||||| |||||||| || | || ||| |||| | || ||||| |
|
|
| T |
3963729 |
attagttcttaaagttttggcgcatcttgtccgcggaaaagataagctagtatgggaaagtcaactagacaagcttagaaaaatgccaagtaaaaaagtt |
3963828 |
T |
|
| Q |
425 |
gataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattgaatttgaaagtgg |
524 |
Q |
| |
|
| | ||||||||| | | |||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
3963829 |
caagatgtaatgagattgagttatgatgatctagatcgcgaagagcaaaagatttttttagatattgcatgttttttcaatgggtcgaatttgaaagtgg |
3963928 |
T |
|
| Q |
525 |
attacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataactatttctgaata |
624 |
Q |
| |
|
| ||| | |||| || | || ||||||||| |||||||||||||| || || ||||||||||||| ||||||||| ||| | || ||||| || | |
|
|
| T |
3963929 |
actacctaaaactattgtggaaagattctgaaagtgataattcagtagccagtgggttagaaaggttgaaagataaagatcttgtttctgtttctaaaca |
3964028 |
T |
|
| Q |
625 |
taatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccct |
700 |
Q |
| |
|
|||||||||||||||||||| ||| | ||||| ||||| ||||| ||||||| ||||||| |||| ||||||| |
|
|
| T |
3964029 |
taatgttatatctatgcatggaattatacaagacatgggtagggagattgttcgccaagaatcaagtggagaccct |
3964104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 3954558 - 3954608
Alignment:
| Q |
14 |
aatattcatagaaggattggccgtatgaaggttcttattgttcttgatgat |
64 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3954558 |
aatattcagagaaggattggccgtatgaaggttcttattgttcttgatgat |
3954608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 371; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 371; E-Value: 0
Query Start/End: Original strand, 15 - 704
Target Start/End: Complemental strand, 13397922 - 13397230
Alignment:
| Q |
15 |
atattcatagaaggattggccgtatgaaggttcttattgttcttgatgatattgaggaaaaagatctgctaaggatgttatttggaactcttgattggtt |
114 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||||||||||||| || |||| ||| || ||| ||||||||||||||||||||||||||| |
|
|
| T |
13397922 |
atattcagagaaggattggccatatgaaggttcttattgttcttgatgatgttacggaagaaggtcagctggagatgttatttggaactcttgattggtt |
13397823 |
T |
|
| Q |
115 |
tcaatctgatagtagaataattgtaataactagagataagcaagtacttattgctaatgaagttgatgatgatgatg---tatatgaagttggggtattg |
211 |
Q |
| |
|
|| ||||||||||||||||||| ||| ||| || ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| |||||||| |
|
|
| T |
13397822 |
tcgatctgatagtagaataattataacaaccagggataagcaagtacttattgctaatgaagttgttgatgatgatgctttatatgaggttagggtattg |
13397723 |
T |
|
| Q |
212 |
aattctagcgaagcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatg |
311 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||| |||| |
|
|
| T |
13397722 |
gattctagtgaagcacttgcgcttttcaatttgaatgcctttaaacaaagtcatcttgaaaacgagttttatgatgtatcaaagagggtggtcgattatg |
13397623 |
T |
|
| Q |
312 |
ccaaaggagttccattagttcttaaagtttttgctcatatgcttcgtggaagacataaggaagaatgggaaagtcgactagacagactgaaaagaatacc |
411 |
Q |
| |
|
|||||||| | |||||||||||||||||||| ||||||||||||||||||| |||| ||| ||||||||||| ||||||| ||| |||||| | || |
|
|
| T |
13397622 |
ccaaaggaatcccattagttcttaaagttttggctcatatgcttcgtggaaagaataaagaactatgggaaagtcagctagacaaacttaaaagactgcc |
13397523 |
T |
|
| Q |
412 |
aattcaagaagttgataaagtaatgagactcaattatgatgatcttgatcgtttagagcaaaagtattttttagatattgcatgttttttcaatggattg |
511 |
Q |
| |
|
||||||| ||||| || | ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || || |
|
|
| T |
13397522 |
aattcaaaaagttcatgatgtaatgagactcagttttgatgatcttgatcgtttagagcagaagtattttttagatattgcatgtttcttcaacgggatg |
13397423 |
T |
|
| Q |
512 |
aatttgaaagtggattacatgaaacatttattgagagattctgacagtgataattcagtggctgttgtgttagaaaggttgcaagataaagctctcataa |
611 |
Q |
| |
|
| |||||||||||| |||||||||| |||||||| ||||| ||| ||||||||||| || ||| ||| ||||||||||||| ||||||||||||| |||| |
|
|
| T |
13397422 |
agtttgaaagtggagtacatgaaacttttattgaaagattatgaaagtgataattctgtagctattgggttagaaaggttgaaagataaagctcttataa |
13397323 |
T |
|
| Q |
612 |
ctatttctgaatataatgttatatctatgcatgacatttttcaagaaatgggccgggaggttgttcgtcaagaatatagtgaagaccctagaa |
704 |
Q |
| |
|
|||||||| || |||||||||||||||||||||||||| | || |||||||| || ||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
13397322 |
ctatttctaaagataatgttatatctatgcatgacattctacaggaaatgggtcgcgaggttgttcgccaagaatctagtgaagaccctagaa |
13397230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 32; Significance: 0.00000002; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 7031024 - 7031099
Alignment:
| Q |
263 |
catcttgaaatgaagtactatgagctatcaaagagggtgatcgaatatgccaaaggagttccattagttcttaaag |
338 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||| | || |||| ||| || ||| |||||| |||||||||||| |
|
|
| T |
7031024 |
catctcgaaatggagtactatgagctatcaaagaagatggtcgattataccgcaggtgttccactagttcttaaag |
7031099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 7075263 - 7075196
Alignment:
| Q |
232 |
gcttttcaatttgaatgcctttaa---acaaagtcatcttgaaatgaagtactatgagctatcaaaga |
296 |
Q |
| |
|
||||||||| ||| |||||||||| ||||| |||||||||||| |||||||| |||||||||||| |
|
|
| T |
7075263 |
gcttttcaacttgcatgcctttaataaacaaaagcatcttgaaatggagtactataagctatcaaaga |
7075196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 34 - 66
Target Start/End: Original strand, 7030801 - 7030833
Alignment:
| Q |
34 |
ccgtatgaaggttcttattgttcttgatgatat |
66 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| |
|
|
| T |
7030801 |
ccgtatgaaggttcttattgttcttgacgatat |
7030833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 7081445 - 7081381
Alignment:
| Q |
96 |
ttggaactcttgattggtttcaatctgatagtagaataattgtaataactagagataagcaagta |
160 |
Q |
| |
|
||||||| |||||||||||| | | | ||||||||| ||||||| ||||| ||||||||||||| |
|
|
| T |
7081445 |
ttggaacacttgattggtttggaacaggtagtagaatcattgtaacaactaaagataagcaagta |
7081381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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