View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8084_high_9 (Length: 319)
Name: NF8084_high_9
Description: NF8084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8084_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 46892694 - 46892397
Alignment:
| Q |
1 |
caagaaaaagagccaaaagagaagcattaaaaacagcattgaaacaccaagccttcatcccagagcatccaccaccatcggatccgaagtgataataaag |
100 |
Q |
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| T |
46892694 |
caagaaaaagagccaaaagagaagcattaaaaacagcattgaaacaccaagccttcatcccacagcatccaccaccatcggatccgaagtgataataaag |
46892595 |
T |
|
| Q |
101 |
catgagaccggagacggcgaagctgaacacgaactgaacaatctggcagtcggtaacgacgcgtttccaaggcggtcggataccaacggtggtgaggaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
46892594 |
catgagaccggagacggcgaagctgaacacgaactgaacaatctggcagtcggtaacgacgcgtttccaaggcggtcggattccaacggtggtgaggaag |
46892495 |
T |
|
| Q |
201 |
tagtaagagtacatgatgacgtggacggatgagttggtaagaagtgcaatagggaagagtgattgagaagaattaagccatagataacacatgactgg |
298 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46892494 |
tagtaagagtacatgatgacgtggacggatgagttggtaagaagtgcaatagggaagagtgattgagaagaattaagccatagataacacatgactgg |
46892397 |
T |
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