View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8084_low_27 (Length: 219)
Name: NF8084_low_27
Description: NF8084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8084_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 44299735 - 44299536
Alignment:
| Q |
1 |
aacacaagcaacctcactccctacattcttccaagactatccctaatcatcaataaaaatacccaacacacacaacacattcaccatctccttcaagtgc |
100 |
Q |
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| T |
44299735 |
aacacaagcaacctcactccctacattcttccaagactacccctaatcatcaataaaaatacccaacacacacaacacattcaccatctccttcaagtgc |
44299636 |
T |
|
| Q |
101 |
aacaaagtaatttcatccaatttcaattcaaaacaataacat-atgccatctataaaacctcgtatcgtaacaacctttttaatcactcacatcatcatt |
199 |
Q |
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||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
44299635 |
aacaaagtaatttaatccaatttcaattcaaaacaataacataatgccatctataaaacctcgtatcgtaacaacctttttactcactcacatcatcatt |
44299536 |
T |
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