View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8085_low_24 (Length: 384)
Name: NF8085_low_24
Description: NF8085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8085_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 44 - 317
Target Start/End: Complemental strand, 22045944 - 22045671
Alignment:
| Q |
44 |
aaacaatttacttctgaatgatagaagcatgggttgaacccgcatttataggtaaaatgaggagagggagtgtgaaatatctaaggacacgtgtcatgat |
143 |
Q |
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| T |
22045944 |
aaacaatttacttctgaatgatagaagcatgggttgaacccgcatttataggaaaaatgaggagagagagtgtgaaatatctaaggacacgtgtcatgat |
22045845 |
T |
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| Q |
144 |
cttacggtgattttaatctatttgcggatctaacaccacgtccacgtcgttttcgtaaacacgtctctcacacatttgtgaatgggtttttgtgttgtgt |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22045844 |
cttacggtgattttaatctatttgcggatctaacaccacgtccacgtcgttttcgtaaacacgtctctcacacatttgtgaatgggtttttgtgttgtgt |
22045745 |
T |
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| Q |
244 |
tttatagggtgtgctacgttttcatctattctaccgttggattagaagttatattaattagattagataatgat |
317 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22045744 |
tttatagggtgtgctacgttttcatcttatctaccgttggattagaagttatattaattagattagataatgat |
22045671 |
T |
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