View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8087_high_34 (Length: 269)
Name: NF8087_high_34
Description: NF8087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8087_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 13 - 251
Target Start/End: Complemental strand, 12678841 - 12678603
Alignment:
| Q |
13 |
aatattgaagaaacttaatacacatgtgtagggctctgaaatttggtcataatataaaaaggacaagtagtggtactaagataacaaatattgccaaacc |
112 |
Q |
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| T |
12678841 |
aatattgaagaaacttaatacacatgtgtagggctctgaaatttggtcataatataaaaaggacaagtagtggtactaagataacaaatattgccaaacc |
12678742 |
T |
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| Q |
113 |
ttgttagcaacgtgttggcattatatgtacatatatatgtacagtactactgcatatcattgatttgtttagttggcttatatatatattcgaacaatct |
212 |
Q |
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| T |
12678741 |
ttgttagcaacgtgttggcattatatgtacatatatatgtacagtactactgcatatcattgatttgtttagttggcttatatatatattcgaacaatct |
12678642 |
T |
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| Q |
213 |
tctgaataagtcatgcatgttattatgagaggcagaggt |
251 |
Q |
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| T |
12678641 |
tctgaataagtcatgcatgttattatgagaggcagaggt |
12678603 |
T |
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