View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8087_high_44 (Length: 237)
Name: NF8087_high_44
Description: NF8087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8087_high_44 |
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Alignment Details
Target: chr4 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 46232880 - 46232659
Alignment:
| Q |
1 |
tttataagtctaagttgcaggatattttactagtggcacgttgggatcggatgaggaggcggtagctaacaatgaacaaggagggaatgataaatgattt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
46232880 |
tttataagtctaagttgcaggatattttactagtggcacgttgggatcggatgaggaggcggtagctaacaatgaacaaggagggaatgatcaatgattt |
46232781 |
T |
|
| Q |
101 |
aggcatattgaacttgtgtaggtttggtatatggaatattgaactttggtgccatcttcataagtcgagatcataaagttgggtcgtgtacgtatacttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46232780 |
aggcatattgaacttgtgtaggtttggtatatggaatattgaactttggtcccatcttcataagtcgagatcataaagttgggtcgtgtacgtatacttt |
46232681 |
T |
|
| Q |
201 |
gttggatttgacatgttgattg |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
46232680 |
gttggatttgacatgttgattg |
46232659 |
T |
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