View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8087_low_1 (Length: 974)

Name: NF8087_low_1
Description: NF8087
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8087_low_1
NF8087_low_1
[»] chr1 (28 HSPs)
chr1 (9-655)||(9451435-9452081)
chr1 (700-974)||(9452126-9452400)
chr1 (696-886)||(13166110-13166300)
chr1 (696-886)||(20200342-20200532)
chr1 (318-548)||(9431245-9431475)
chr1 (700-886)||(20840517-20840703)
chr1 (736-875)||(13150048-13150187)
chr1 (696-844)||(26971693-26971839)
chr1 (696-886)||(4246754-4246946)
chr1 (9-173)||(9428562-9428726)
chr1 (700-886)||(11667156-11667342)
chr1 (696-886)||(24986699-24986889)
chr1 (696-794)||(22891146-22891244)
chr1 (561-655)||(4245881-4245976)
chr1 (699-884)||(1626292-1626476)
chr1 (564-651)||(13165246-13165334)
chr1 (699-796)||(12753779-12753876)
chr1 (745-886)||(10339413-10339553)
chr1 (830-886)||(22891096-22891152)
chr1 (564-651)||(26972622-26972709)
chr1 (564-643)||(11668092-11668171)
chr1 (576-651)||(14746004-14746080)
chr1 (847-885)||(23477191-23477229)
chr1 (743-875)||(25349494-25349625)
chr1 (847-886)||(15803468-15803507)
chr1 (847-886)||(17838233-17838272)
chr1 (845-884)||(41330638-41330677)
chr1 (745-791)||(8282685-8282731)
[»] chr5 (22 HSPs)
chr5 (696-886)||(24190579-24190769)
chr5 (698-886)||(22251294-22251482)
chr5 (696-886)||(22404014-22404204)
chr5 (696-886)||(23419810-23420000)
chr5 (696-886)||(23757510-23757700)
chr5 (696-886)||(23822966-23823156)
chr5 (772-886)||(22240231-22240345)
chr5 (696-886)||(26037494-26037683)
chr5 (696-886)||(22081945-22082134)
chr5 (696-794)||(30605036-30605134)
chr5 (782-893)||(9420600-9420712)
chr5 (746-886)||(23624607-23624746)
chr5 (564-651)||(25105644-25105732)
chr5 (564-651)||(25164737-25164825)
chr5 (696-787)||(9421868-9421959)
chr5 (745-884)||(20713999-20714137)
chr5 (563-651)||(22404984-22405073)
chr5 (696-886)||(38406077-38406266)
chr5 (745-886)||(13941269-13941409)
chr5 (564-644)||(9422697-9422778)
chr5 (698-776)||(22245722-22245800)
chr5 (601-655)||(23420780-23420834)
[»] chr6 (60 HSPs)
chr6 (696-886)||(17235310-17235500)
chr6 (696-886)||(13196040-13196230)
chr6 (696-886)||(33666507-33666695)
chr6 (696-886)||(8464920-8465110)
chr6 (696-886)||(9280963-9281153)
chr6 (696-886)||(23879601-23879791)
chr6 (696-886)||(25970393-25970583)
chr6 (696-886)||(25974833-25975023)
chr6 (700-886)||(19168166-19168352)
chr6 (696-886)||(17855911-17856101)
chr6 (696-886)||(21722661-21722850)
chr6 (696-883)||(19893924-19894111)
chr6 (696-886)||(19077859-19078045)
chr6 (696-886)||(20653785-20653976)
chr6 (696-873)||(13869670-13869845)
chr6 (696-886)||(20989043-20989233)
chr6 (696-883)||(21705786-21705973)
chr6 (778-871)||(19100673-19100766)
chr6 (696-875)||(17863738-17863917)
chr6 (739-886)||(11992274-11992421)
chr6 (564-655)||(14258759-14258851)
chr6 (559-651)||(13870518-13870611)
chr6 (739-886)||(12385112-12385258)
chr6 (567-645)||(8465896-8465975)
chr6 (707-880)||(12038968-12039142)
chr6 (564-651)||(20558151-20558239)
chr6 (562-652)||(20989986-20990077)
chr6 (803-883)||(17525592-17525672)
chr6 (767-886)||(20465165-20465285)
chr6 (563-640)||(19077412-19077490)
chr6 (563-651)||(12039904-12039993)
chr6 (698-814)||(19172133-19172248)
chr6 (561-651)||(17855040-17855131)
chr6 (561-651)||(33665639-33665730)
chr6 (745-891)||(26964803-26964947)
chr6 (696-793)||(17527230-17527327)
chr6 (567-651)||(19894735-19894820)
chr6 (746-886)||(29252932-29253074)
chr6 (564-651)||(9281931-9282019)
chr6 (564-651)||(13195172-13195260)
chr6 (699-791)||(24542373-24542465)
chr6 (564-651)||(25948377-25948465)
chr6 (745-808)||(23882029-23882092)
chr6 (564-642)||(34991214-34991293)
chr6 (564-651)||(17234440-17234528)
chr6 (563-645)||(17864640-17864723)
chr6 (600-651)||(21717767-21717818)
chr6 (600-651)||(21725603-21725654)
chr6 (839-886)||(23880944-23880991)
chr6 (739-794)||(25806167-25806222)
chr6 (745-886)||(15930102-15930242)
chr6 (745-794)||(19598446-19598495)
chr6 (839-884)||(19598529-19598574)
chr6 (564-651)||(15897896-15897984)
chr6 (563-642)||(25805301-25805381)
chr6 (839-886)||(3566104-3566151)
chr6 (840-886)||(34991158-34991205)
chr6 (841-886)||(21316893-21316938)
chr6 (746-791)||(21316941-21316986)
chr6 (745-790)||(34639555-34639600)
[»] scaffold0185 (1 HSPs)
scaffold0185 (696-886)||(1621-1811)
[»] chr4 (36 HSPs)
chr4 (696-886)||(16384606-16384796)
chr4 (696-893)||(18600906-18601103)
chr4 (696-891)||(23399444-23399639)
chr4 (696-891)||(25117572-25117767)
chr4 (696-857)||(33898292-33898452)
chr4 (700-895)||(28020023-28020218)
chr4 (747-886)||(10724964-10725103)
chr4 (747-886)||(10938733-10938872)
chr4 (776-886)||(15161756-15161866)
chr4 (563-651)||(16383737-16383826)
chr4 (564-651)||(10190735-10190823)
chr4 (746-884)||(15699592-15699729)
chr4 (563-651)||(8163630-8163719)
chr4 (699-886)||(19182936-19183124)
chr4 (566-651)||(33899405-33899491)
chr4 (564-651)||(21477957-21478045)
chr4 (564-651)||(25116672-25116760)
chr4 (564-643)||(15162718-15162798)
chr4 (720-867)||(9069684-9069830)
chr4 (563-644)||(10724107-10724189)
chr4 (563-644)||(10937876-10937958)
chr4 (745-886)||(15623201-15623341)
chr4 (609-651)||(28019198-28019240)
chr4 (839-884)||(10683284-10683329)
chr4 (839-884)||(10896924-10896969)
chr4 (696-757)||(15161866-15161927)
chr4 (699-791)||(33746638-33746731)
chr4 (746-790)||(10718241-10718285)
chr4 (746-790)||(10932010-10932054)
chr4 (564-651)||(23400411-23400499)
chr4 (839-886)||(10718511-10718558)
chr4 (839-886)||(10932280-10932327)
chr4 (847-886)||(33744532-33744571)
chr4 (720-821)||(19660156-19660255)
chr4 (746-791)||(31971680-31971725)
chr4 (845-882)||(41786287-41786324)
[»] chr3 (36 HSPs)
chr3 (696-886)||(17135398-17135588)
chr3 (696-886)||(7028324-7028514)
chr3 (696-891)||(24196241-24196436)
chr3 (696-886)||(18482626-18482816)
chr3 (696-886)||(23953811-23954001)
chr3 (696-892)||(13514865-13515062)
chr3 (696-884)||(13791393-13791581)
chr3 (696-886)||(1918497-1918687)
chr3 (696-886)||(15572259-15572446)
chr3 (696-886)||(20626895-20627086)
chr3 (739-886)||(21547542-21547689)
chr3 (696-883)||(18063463-18063650)
chr3 (563-651)||(20748384-20748473)
chr3 (759-885)||(28051917-28052043)
chr3 (564-651)||(44452329-44452417)
chr3 (564-651)||(13790528-13790616)
chr3 (564-651)||(19633736-19633824)
chr3 (561-651)||(15636095-15636186)
chr3 (563-651)||(1919457-1919546)
chr3 (564-651)||(19532105-19532193)
chr3 (748-886)||(286154-286291)
chr3 (696-793)||(19634594-19634692)
chr3 (839-886)||(296255-296302)
chr3 (839-886)||(3551734-3551781)
chr3 (748-875)||(6578814-6578940)
chr3 (839-886)||(28052193-28052240)
chr3 (840-886)||(44453136-44453183)
chr3 (696-774)||(296157-296235)
chr3 (746-794)||(15674183-15674231)
chr3 (739-791)||(17042108-17042160)
chr3 (839-882)||(6578579-6578622)
chr3 (745-794)||(3551824-3551873)
chr3 (746-791)||(13914544-13914589)
chr3 (746-791)||(13920269-13920314)
chr3 (563-615)||(18035154-18035207)
chr3 (564-643)||(23954788-23954869)
[»] scaffold0103 (2 HSPs)
scaffold0103 (696-886)||(24931-25121)
scaffold0103 (564-651)||(25896-25984)
[»] chr8 (20 HSPs)
chr8 (696-886)||(22485849-22486039)
chr8 (696-885)||(23540661-23540850)
chr8 (696-883)||(27924708-27924896)
chr8 (696-883)||(33962449-33962633)
chr8 (696-852)||(45136827-45136982)
chr8 (696-883)||(33977775-33977959)
chr8 (799-886)||(22476893-22476980)
chr8 (563-655)||(23541629-23541723)
chr8 (562-651)||(22472629-22472719)
chr8 (563-651)||(22480935-22481024)
chr8 (696-886)||(26537003-26537193)
chr8 (745-886)||(18622426-18622563)
chr8 (564-651)||(45133513-45133601)
chr8 (720-875)||(9997237-9997390)
chr8 (564-645)||(24091821-24091903)
chr8 (564-643)||(11221497-11221577)
chr8 (564-645)||(27925651-27925733)
chr8 (746-790)||(1684721-1684765)
chr8 (847-886)||(9997590-9997629)
chr8 (717-774)||(25241095-25241152)
[»] scaffold0453 (1 HSPs)
scaffold0453 (696-886)||(1254-1444)
[»] chr2 (16 HSPs)
chr2 (700-886)||(12911212-12911398)
chr2 (700-886)||(24789412-24789598)
chr2 (696-886)||(23759340-23759530)
chr2 (769-886)||(22614329-22614446)
chr2 (564-651)||(12910338-12910426)
chr2 (746-886)||(15329086-15329225)
chr2 (564-651)||(23758474-23758562)
chr2 (696-773)||(22611607-22611684)
chr2 (564-651)||(22610741-22610829)
chr2 (561-643)||(36399025-36399110)
chr2 (699-883)||(21531097-21531280)
chr2 (561-650)||(24790382-24790472)
chr2 (745-794)||(21249543-21249592)
chr2 (746-791)||(27108209-27108254)
chr2 (746-791)||(24311201-24311246)
chr2 (746-791)||(27111798-27111843)
[»] scaffold0129 (1 HSPs)
scaffold0129 (696-886)||(16221-16411)
[»] chr7 (36 HSPs)
chr7 (696-886)||(645849-646038)
chr7 (696-886)||(12326528-12326718)
chr7 (696-886)||(15506946-15507136)
chr7 (696-886)||(11520664-11520855)
chr7 (696-886)||(4459455-4459646)
chr7 (696-869)||(16207151-16207324)
chr7 (696-886)||(20992259-20992450)
chr7 (696-886)||(15438792-15438986)
chr7 (712-886)||(14165892-14166066)
chr7 (696-882)||(29545398-29545584)
chr7 (760-886)||(16221826-16221952)
chr7 (745-886)||(23082030-23082170)
chr7 (563-651)||(11521631-11521720)
chr7 (564-651)||(11998728-11998816)
chr7 (562-651)||(644980-645070)
chr7 (564-642)||(4458588-4458667)
chr7 (566-643)||(11588315-11588393)
chr7 (563-643)||(12325673-12325754)
chr7 (720-820)||(10661602-10661701)
chr7 (745-886)||(10037984-10038124)
chr7 (564-645)||(13455339-13455421)
chr7 (566-651)||(16208103-16208189)
chr7 (745-886)||(21261195-21261335)
chr7 (744-867)||(26132228-26132350)
chr7 (745-869)||(14927410-14927533)
chr7 (745-869)||(15350876-15350999)
chr7 (745-882)||(24902871-24903006)
chr7 (843-882)||(3801868-3801907)
chr7 (839-886)||(10661959-10662006)
chr7 (746-791)||(9567656-9567701)
chr7 (845-886)||(10280708-10280749)
chr7 (745-794)||(23960790-23960839)
chr7 (564-651)||(14165015-14165103)
chr7 (841-886)||(11999536-11999582)
chr7 (720-794)||(42636946-42637020)
chr7 (745-794)||(20924452-20924501)
[»] scaffold0037 (2 HSPs)
scaffold0037 (697-886)||(109512-109701)
scaffold0037 (563-651)||(110480-110569)
[»] scaffold0059 (3 HSPs)
scaffold0059 (696-891)||(47639-47835)
scaffold0059 (566-651)||(50315-50401)
scaffold0059 (562-651)||(61696-61786)
[»] scaffold0024 (1 HSPs)
scaffold0024 (696-883)||(159787-159974)
[»] scaffold0359 (1 HSPs)
scaffold0359 (696-886)||(2606-2795)
[»] scaffold0088 (1 HSPs)
scaffold0088 (696-886)||(37306-37494)
[»] scaffold0213 (1 HSPs)
scaffold0213 (696-886)||(7832-8022)
[»] scaffold0259 (2 HSPs)
scaffold0259 (696-887)||(16578-16769)
scaffold0259 (566-651)||(17500-17586)
[»] scaffold0190 (1 HSPs)
scaffold0190 (696-887)||(15874-16064)
[»] scaffold0006 (2 HSPs)
scaffold0006 (696-870)||(88462-88634)
scaffold0006 (567-651)||(87588-87672)
[»] scaffold0226 (6 HSPs)
scaffold0226 (696-886)||(17378-17568)
scaffold0226 (696-886)||(26772-26962)
scaffold0226 (700-886)||(6792-6977)
scaffold0226 (564-645)||(18353-18435)
scaffold0226 (564-645)||(27747-27829)
scaffold0226 (565-651)||(7762-7849)
[»] scaffold0069 (1 HSPs)
scaffold0069 (739-870)||(9433-9564)
[»] scaffold0102 (1 HSPs)
scaffold0102 (564-651)||(36854-36942)
[»] scaffold0333 (1 HSPs)
scaffold0333 (562-651)||(5491-5581)
[»] scaffold0338 (1 HSPs)
scaffold0338 (563-651)||(16437-16525)
[»] scaffold1001 (1 HSPs)
scaffold1001 (699-794)||(682-776)
[»] scaffold0008 (1 HSPs)
scaffold0008 (839-886)||(36599-36646)
[»] scaffold0035 (2 HSPs)
scaffold0035 (749-794)||(38074-38119)
scaffold0035 (847-886)||(38171-38210)
[»] scaffold0034 (1 HSPs)
scaffold0034 (746-791)||(50258-50303)


Alignment Details
Target: chr1 (Bit Score: 473; Significance: 0; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 473; E-Value: 0
Query Start/End: Original strand, 9 - 655
Target Start/End: Original strand, 9451435 - 9452081
Alignment:
Q  9 gtcgaagaatatctcgtcaacttc---cctgcattaagattagggaaaagagagattaatgtgaaataatataacataaatatcaataacagagttcgat 105  Q
    |||||| |||||||||||||||||   ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9451435 gtcgaataatatctcgtcaacttcttccctgcattaagattagggaaaagagagattaatatgaaataatataacataaatatcaataacagagttcgat 9451534  T
Q  106 taattttggctacatcttaggactgtttgcatacttttcaatt-aaaagaaaaatgtatataaagtatttacaatcactcacaaaagagcatttaagcct 204  Q
    ||| ||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  9451535 taaatttggctacatcttaggactg-ttgcagacttttcaattgaaaagaaaaatatatataaagtatttacaatcattcacaaaagagcatttaagcct 9451633  T
Q  205 aaaaataattatcttgttggctaattgatagggaagcgtatagttactacatgtgtgtgtaatacgtacatttttgttaaaaaagtgaactataatatta 304  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  9451634 aaaaataattatcatgttggctaattgatagggaagcgtatag-tactacatgtgtgt---atacgtacatttttgttaaaaaagtgaactataatatta 9451729  T
Q  305 ttgttannnnnnnatgaagtaaactgcactataattctttaatctcaagaaaaaacttcactctac---nnnnnnnnnnctgttgcaggttttgtcgttg 401  Q
    ||||||       ||||||||||||||||||||||||||||||||||||||||||||||||| |||             |||||||||||||||||||||    
T  9451730 ttgttatttttttatgaagtaaactgcactataattctttaatctcaagaaaaaacttcactatactttttttttttttctgttgcaggttttgtcgttg 9451829  T
Q  402 gcattattcgaggtatggattccatatcatccattcatcgtgttttctcttttatgaatgataaattgcatagtcattaccccttctcctttttcttgta 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  9451830 gcattattcgaggtatggattccatatcatccattcatcgtgttttctcttttatgaatgataaattgcatagtcattaccccttctcc--tttcttgta 9451927  T
Q  502 aaccatagaacctgcgagcaatacctttcaatgattcttttgaataaggcnnnnnnnccttttgaaattctagcgcacttgttttaaatgttctatatga 601  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  9451928 aaccatagaacctgcgagcaatacctttcaatgattcttttgaataaggctttttttccttttgaaattctagcgcacttgttttaaatgttctatatga 9452027  T
Q  602 tgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataagcag 655  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9452028 tgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataagcag 9452081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 700 - 974
Target Start/End: Original strand, 9452126 - 9452400
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaag 799  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  9452126 tttccttaaacaataacgggcgcgcgtacaagtaggcgagaacccaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttatagag 9452225  T
Q  800 acgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccactttttaaat 899  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9452226 acgcctaaacacatgttgaaacttcggttccaacttacagaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccactttttaaat 9452325  T
Q  900 cgaacattttccaaccataactacaaaatcagaattaaactagtttggtgcttctaatgatgttgatctgttaat 974  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9452326 cgaacattttccaaccataactacaaaatcagaattaaactagtttggtgcttctaatgatgttgatctgttaat 9452400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 13166110 - 13166300
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||||| ||||   ||||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||||||      
T  13166110 attgtttccttaaacaataaagggcgcgcttacatacaggcgagaactcaggcacactgaaccgtaccaggatgttgaagcatcgcatccaacatcttcc 13166209  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13166210 agagacgcctaaacacatgttggaactttggttccaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 13166300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 20200532 - 20200342
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||||||||||||||||  || ||||||||| ||||||| ||||||| |||||||| |||||||||||||||||||     
T  20200532 attgtttccttaaacaataaagggcgcgcgtacaagtaggaaagtactcaggcatactgaaccgtgccaggatgttggaacatcgtatccaacatcttac 20200433  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  20200432 agagatgcctaaacacatgttggaacattggttccaacttatacaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 20200342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 318 - 548
Target Start/End: Original strand, 9431245 - 9431475
Alignment:
Q  318 atgaagtaaactgcactataattctttaatctcaagaaaaaacttcactctacnnnnnnnnnnctgttgcaggttttgtcgttggcattattcgaggtat 417  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| | ||||           ||||||||| |||||||   ||||||  || ||||||    
T  9431245 atgaagtaaactgcactataattatgtgatctcaagaaaaaacttaattcta-ttttttttttctgttgcagattttgtctcaggcatttatcaaggtat 9431343  T
Q  418 ggattccatatcatccattcatcgtgttttctcttttatgaatgataaattgcatagtcattacccc-ttctcctttttcttgtaaaccatagaacctgc 516  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||    
T  9431344 ggattccatatcatccattcatcgtgttttctcttttatgaataataaattgcatagtcattacccctttctcctttttcttgtaacccatagaacccgc 9431443  T
Q  517 gagcaatacctttcaatgattcttttgaataa 548  Q
    ||||||||||||| ||||||||||||||||||    
T  9431444 gagcaataccttttaatgattcttttgaataa 9431475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 700 - 886
Target Start/End: Complemental strand, 20840703 - 20840517
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaag 799  Q
    |||| |||||||||||  |||||| |||||||||||| |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||| | ||    
T  20840703 tttcattaaacaataaagggcgcgtgtacaagtaggcaagaactcaggcacactgaactgtgtcaggatgttggaacatcgtatccaacatcttacagag 20840604  T
Q  800 acgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||||||||| |||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  20840603 atgcctaaacatatgttggaacattggttccaacttacacatcaaggatatttgttttagcaacaatgcagccaatacaaataccca 20840517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 736 - 875
Target Start/End: Original strand, 13150048 - 13150187
Alignment:
Q  736 cgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaactt 835  Q
    |||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||  | |||||||||||||||||||| ||||| |||||||||||    
T  13150048 cgagaactcaggcacactgaaccgtgccaggatgttgaagcatcgcatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 13150147  T
Q  836 acaaaacaaggatatttgttttagcaacaatgcagccaat 875  Q
    ||| ||||||||||||||||||||||||||||||||||||    
T  13150148 acagaacaaggatatttgttttagcaacaatgcagccaat 13150187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 696 - 844
Target Start/End: Complemental strand, 26971839 - 26971693
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   | |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||      
T  26971839 attgtttccttaaacaataaa--gagcgcgtacaaataggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttcc 26971742  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    | |||||||||||||||||||| |||||  |||||||||||||||||||    
T  26971741 agagacgcctaaacacatgttgaaactttagttccaacttacaaaacaa 26971693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 4246754 - 4246946
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatc--gtatccaacatctt 793  Q
    ||||||||||||||||||||  | | ||||||||   ||||||||||||||||||||| |||  |||||| ||||||||| |||  ||||||||||||||    
T  4246754 attgtttccttaaacaataaaggacacgcgtacatacaggcgagaactcaggcacactaaaccatgccaggatgttggaggatcgtgtatccaacatctt 4246853  T
Q  794 ataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | | ||||| |||||||||||||| ||| | |||||||||  ||| | ||||||||||||||||||||||||||||||||||| ||||||||||    
T  4246854 acagagacgtctaaacacatgttgaaacattggttccaac-aacacatacaaggatatttgttttagcaacaatgcagccaatacaaataccca 4246946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 9 - 173
Target Start/End: Original strand, 9428562 - 9428726
Alignment:
Q  9 gtcgaagaatatctcgtcaacttccctgcattaagattagggaaaagagagattaatgtgaaataatataacataaatatcaataa-cagagttcgatta 107  Q
    |||||| ||||| || ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  9428562 gtcgaataatatttcatcaacttccctgcattaagataagg-aagagagagattaatgtgaaataatataacatagatatcgataatcagagttcgatta 9428660  T
Q  108 attttggctacatcttaggactgtttgcatacttttcaatt-aaaagaaaaatgtatataaagtatt 173  Q
    |  || ||||||||||||||||| ||||| ||||||| |||  |||||||||| ||||| |||||||    
T  9428661 aaattagctacatcttaggactg-ttgcagacttttctattgcaaagaaaaatatatattaagtatt 9428726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 700 - 886
Target Start/End: Complemental strand, 11667342 - 11667156
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaag 799  Q
    ||||||||||||||||  ||  ||||||||| |||||  |||| ||| |||||| ||||||||||  |||||||| ||||||||||||||||||| | ||    
T  11667342 tttccttaaacaataaagggtccgcgtacaaataggcatgaacccagacacacttaactgtgccatgatgttggaacatcgtatccaacatcttacagag 11667243  T
Q  800 acgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | | |||||||||||||||||| | |||||||||  ||| |||||||||||||||||| | |||||||| || |||| ||||||||||    
T  11667242 atgtctaaacacatgttggaacattggttccaac-aacacaaacaaggatatttgtttaatcaacaatggagtcaatacaaataccca 11667156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 24986699 - 24986889
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || || | ||||| ||||   |||| | | |||||||||| |||||||||||||||| ||| |||||||||||||||     
T  24986699 attgtttccttaaacaataaagggtgcacatacaaataggtatgaacacggtcacactgaaccgtgccagaatgttggaacattgtatccaacatcttac 24986798  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| | |||||||||  ||| |  ||||||||||| ||||||||| ||||||| |||| ||||||||||    
T  24986799 agagatgcctaaacacatgttggaacattggttccaac-aacacagtcaaggatatttattttagcaataatgcagtcaatacaaataccca 24986889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 696 - 794
Target Start/End: Complemental strand, 22891244 - 22891146
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||||| |||||||| ||| |||||||||| ||||    
T  22891244 attgtttccttaaacaataaaggacgcgcgtacaagtaggcaagaactcaggcacactgaaccgtgccaggatgttggaacatagtatccaacaactta 22891146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 561 - 655
Target Start/End: Original strand, 4245881 - 4245976
Alignment:
Q  561 ttttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataagcag 655  Q
    |||||||| |||||| |||||||||||| ||||| | ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4245881 ttttgaaaatctagcacacttgttttaatatgttatgtatgatgttttgacgtttgcaatgttatgattaatgtttcaacatcacgcgataagcag 4245976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 699 - 884
Target Start/End: Original strand, 1626292 - 1626476
Alignment:
Q  699 gtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaa 798  Q
    ||||||||||| || |  | ||||||||||||||||||  |||  ||||||||||||||||| |||| |||||||| |||| |||||||||||||| | |    
T  1626292 gtttccttaaaaaagataaagcgcgcgtacaagtaggcatgaaaccaggcacactgaactgttccaggatgttggaacatcatatccaacatcttacaga 1626391  T
Q  799 gacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
     | || |||| |||||||||||  | |  ||||||  ||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  1626392 aatgcataaa-acatgttggaatattgtatccaac-aacataaacaaggatatttgttttagcaataatgcagccaatacaaatacc 1626476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 13165246 - 13165334
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| | ||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  13165246 tgaaattctagcacacttgttttaatacgttctgtatgatgttttaacgtttgcgatgttatgattaatgttacaacatcacgcgataa 13165334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 699 - 796
Target Start/End: Original strand, 12753779 - 12753876
Alignment:
Q  699 gtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttata 796  Q
    ||||||||||| |||   ||| ||||||||||||||||  |||| |||||||||||||| ||||||| |||||||| |||||||||||||||| ||||    
T  12753779 gtttccttaaataattcaaggtgcgcgtacaagtaggctcgaacccaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcatata 12753876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 745 - 886
Target Start/End: Complemental strand, 10339553 - 10339413
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    ||||||||||||| ||| ||  |||||||| ||||||||||||||||||| | | | ||||||| |||||||||||| | |  |||||| |   || ||     
T  10339553 aggcacactgaaccgtgtcaagatgttggaacatcgtatccaacatcttacagaaatgcctaaa-acatgttggaacatagtatccaacatcgcaatcat 10339455  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||| ||||||||| |||||||||||| ||||||||||    
T  10339454 ggatatttattttagcaataatgcagccaatacaaataccca 10339413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 830 - 886
Target Start/End: Complemental strand, 22891152 - 22891096
Alignment:
Q  830 caacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  22891152 caacttacacaacaaggatatttattttagcaacaatgcagccaatacaaataccca 22891096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 26972709 - 26972622
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| ||||||| |||||||||  ||||||| | ||||||||||||||||| |||||||  |||||||    
T  26972709 tgaaattctagcgcacttgttttaatatgttctgtatgatgttacaacgttt-cgatgttacgattaatgtttcaacatccggcgataa 26972622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 643
Target Start/End: Complemental strand, 11668171 - 11668092
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatca 643  Q
    ||||||||||||||||||||||||| ||||| | || ||||||| ||||||| ||||||| || | |||||||||||||||    
T  11668171 tgaaattctagcgcacttgttttaatatgtt-tgtaagatgtttcaacgtttacaatgttccgttcaatgttccaacatca 11668092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 576 - 651
Target Start/End: Complemental strand, 14746080 - 14746004
Alignment:
Q  576 gcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||| | ||| | ||||||||||||  ||||||||||||| |||||||||| ||| ||||||||||||    
T  14746080 gcacttgttttaagaggttatgtatgatgttttagtgtttgcaatgttaagattaatgtttcaatatcacgcgataa 14746004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 847 - 885
Target Start/End: Complemental strand, 23477229 - 23477191
Alignment:
Q  847 atatttgttttagcaacaatgcagccaatccaaataccc 885  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  23477229 atatttgttttagcaacaatgcagccaatacaaataccc 23477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 743 - 875
Target Start/End: Complemental strand, 25349625 - 25349494
Alignment:
Q  743 tcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaa 841  Q
    |||||||||||||||  |||||| ||||||||  ||| |||||||||||||| | | | ||||||| |||||||||||| | |  ||||||  ||| |||    
T  25349625 tcaggcacactgaaccatgccaggatgttggaatatcatatccaacatcttacataaatgcctaaa-acatgttggaacattgtatccaac-aacacaaa 25349528  T
Q  842 caaggatatttgttttagcaacaatgcagccaat 875  Q
    || |||||||||||||| ||| ||||||| ||||    
T  25349527 catggatatttgttttaacaataatgcagtcaat 25349494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 847 - 886
Target Start/End: Complemental strand, 15803507 - 15803468
Alignment:
Q  847 atatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  15803507 atatttgttttagcaataatgcagccaatgcaaataccca 15803468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 847 - 886
Target Start/End: Complemental strand, 17838272 - 17838233
Alignment:
Q  847 atatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  17838272 atatttgttttagcaataatgcagccaatacaaataccca 17838233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 845 - 884
Target Start/End: Complemental strand, 41330677 - 41330638
Alignment:
Q  845 ggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
    |||||||||||||||||||||||||| |||| ||||||||    
T  41330677 ggatatttgttttagcaacaatgcagtcaatacaaatacc 41330638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 745 - 791
Target Start/End: Original strand, 8282685 - 8282731
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    |||| |||||||||||| ||| |||||||| ||||||||||||||||    
T  8282685 aggctcactgaactgtgtcaggatgttggaacatcgtatccaacatc 8282731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 5e-77; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 24190579 - 24190769
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||      
T  24190579 attgtttccttaaacaataaggggcgcgcgtacaaataggcgagaactcaagcacactgaaccgtgccagaatgttggagcatcgtatccaacatcttcc 24190678  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  24190679 aaagacgcctaaacacatgttggaactttagttccaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 24190769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 698 - 886
Target Start/End: Complemental strand, 22251482 - 22251294
Alignment:
Q  698 tgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataa 797  Q
    ||||||||||||| ||||  |||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  ||    
T  22251482 tgtttccttaaacgataaagggcgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaacatctttcaa 22251383  T
Q  798 agacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22251382 agacgcctaaacacatgttgaaactttggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 22251294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 22404204 - 22404014
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||| ||||| |||||||  | ||||||| |||| || |||||||  |||||| |||||||| ||| ||||||||||||||      
T  22404204 attgtttccttaaacaataacgggcgcacgtacaaacatgcgagaaatcagacatactgaaccatgccaggatgttggaacattgtatccaacatcttcc 22404105  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  22404104 agagacgcctaaacacatgttggaactttggttccaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 22404014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 23420000 - 23419810
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||| ||||||  ||||||||||||   | |||||||||||| |||| ||||| ||||||| |||||||||||| |||||||||||||||     
T  23420000 attgtttccttaaccaataaagggcgcgcgtacatacatgcgagaactcagacacattgaaccgtgccaggatgttggagcattgtatccaacatcttac 23419901  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| ||| | ||| |||||  ||| ||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  23419900 agagacgcctaaacacatgttgaaacattggtaccaac-aacacaaacaagaatatttgttttaacaacaatgcagccaatacaaataccca 23419810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 23757700 - 23757510
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||||||||| ||| ||  ||||  || |||||||||  ||||||| |||||||| |||||||||||||||| |||    
T  23757700 attgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaacctagacacactgaatcgtgccaggatgttggaacatcgtatccaacatcatat 23757601  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| | |||||||||| ||| |  ||||||||||||||||||||||||||| ||| | ||||||||||    
T  23757600 agagatgcctaaacacatgttggaacattggttccaactaacacataaaggatatttgttttagcaacaatgcacccagtacaaataccca 23757510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 23823156 - 23822966
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||||||||| ||| ||  ||||  || |||||||||  ||||||| |||||||| |||||||||||||||| |||    
T  23823156 attgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaacctagacacactgaatcgtgccaggatgttggaacatcgtatccaacatcatat 23823057  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| | |||||||||| ||| |  ||||||||||||||||||||||||||| ||| | ||||||||||    
T  23823056 agagatgcctaaacacatgttggaacattggttccaactaacacataaaggatatttgttttagcaacaatgcacccagtacaaataccca 23822966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 772 - 886
Target Start/End: Complemental strand, 22240345 - 22240231
Alignment:
Q  772 ggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagc 871  Q
    |||||||||||| |||||||||  | |||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  22240345 ggagcatcgtattcaacatctttcagagacacctaaacacatgttgaaactttggttccaacttacagaacaaggatatttgttttagcaacaatgcagc 22240246  T
Q  872 caatccaaataccca 886  Q
    |||| ||||||||||    
T  22240245 caatacaaataccca 22240231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 26037494 - 26037683
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || |||||  ||| || ||  ||||  |||||||||||||  |||||| |||||||| |||||||||| ||||||||     
T  26037494 attgtttccttaaacaataaagggtgcgcgc-caaatatgcatgaaccgaggcacactgaaccatgccaggatgttggaacatcgtatccgacatcttac 26037592  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||| ||| | |||||||||  ||| ||||||| |||||||||||||||| |||||||||||| ||||||||||    
T  26037593 agagatgcctaaacacatgttgaaacattggttccaac-aacacaaacaagaatatttgttttagcaataatgcagccaatacaaataccca 26037683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 22082134 - 22081945
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| |||||||  | ||  ||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||||     
T  22082134 attgtttccttaaacaataaagggcgcacgtacaaacatgcatgaactcaagcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttac 22082035  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||| || | |||||||||| | | || ||||  ||| ||||| |||||||||||||| ||||||| |||||||| ||||||||||    
T  22082034 agagatgcctgaa-atatgttggaacattgatttcaac-aacacaaacatggatatttgttttaacaacaatacagccaatacaaataccca 22081945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 696 - 794
Target Start/End: Complemental strand, 30605134 - 30605036
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||||||||||  ||||| ||||||| || ||  ||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  30605134 attgtttccttaaacaataaagggcgcccgtacaaataagcatgaactcaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatctta 30605036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 782 - 893
Target Start/End: Complemental strand, 9420712 - 9420600
Alignment:
Q  782 atccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttg-ttttagcaacaatgcagccaatccaaa 880  Q
    ||||||||||||| | ||| ||||||||||||||||||||||  |||||||||||||  ||||||||||||| ||||||||| ||||||| |||| ||||    
T  9420712 atccaacatcttacagagatgcctaaacacatgttggaactttagttccaacttacaggacaaggatatttgtttttagcaaaaatgcagtcaatgcaaa 9420613  T
Q  881 tacccaccacttt 893  Q
    ||| || ||||||    
T  9420612 tactcaacacttt 9420600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 746 - 886
Target Start/End: Original strand, 23624607 - 23624746
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaa 844  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||| | | | || | ||  |||||||| || | |||||||||  ||| ||||||    
T  23624607 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagacatgcttgaat-catgttgggacattggttccaaca-acagaaacaa 23624704  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  23624705 ggatatttgttttagcaataatgcagccaatacaaataccca 23624746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 25105732 - 25105644
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    ||||||||||||||||||||||||| ||||||||| ||||||    
T  25105732 tgaaattctagcgcacttgttttaatatgttctgtatgatgttacggcgtttgcaatgttacgattaatgtttcaacatcacacgataa 25105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 25164825 - 25164737
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| ||||||| |||||||||    ||||||||||||||||||||||||| ||||||||| ||||||    
T  25164825 tgaaattctagcgcacttgttttaatatgttctgtatgatgttacggcgtttgcaatgttacgattaatgtttcaacatcacacgataa 25164737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 696 - 787
Target Start/End: Complemental strand, 9421959 - 9421868
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaa 787  Q
    ||||||||||||||||||||  |||||||||||||||||||  |||| ||||| |||||||| |||| || |||||||| ||||||||||||    
T  9421959 attgtttccttaaacaataaggggcgcgcgtacaagtaggcatgaacccaggctcactgaaccgtgctaggatgttggaacatcgtatccaa 9421868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 745 - 884
Target Start/End: Complemental strand, 20714137 - 20713999
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    ||||||||| ||| || |||| |||||||| ||||||||| ||||||||||| ||| |||| || |||||||||||| |    |||||| | | |||||     
T  20714137 aggcacactaaaccgttccaggatgttggaacatcgtatctaacatcttatagagatgcctgaa-acatgttggaacatgatatccaacatcctaaacat 20714039  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  20714038 ggatatttgttttagcaataatgcagccaatacaaatacc 20713999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 22405073 - 22404984
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||| |||||||||||| | ||| | |||||||||| | | ||||||||||||||||||||||| |||||||| |||||||    
T  22405073 ttgaaattctagcacacttgttttaataggttatgtatgatgtttcagcatttgcaatgttacgattaatgtttcaacatcatgcgataa 22404984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 38406077 - 38406266
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||| |||||||||  | || |||     |||||||||||| |||| || ||| |||| ||||||||||||||||||||    
T  38406077 attgtttccttaaacaataaagggcacgcgtacaaacaagcaagatacagggcacactgaaccgtgctaggatgctggaacatcgtatccaacatcttat 38406176  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | | | |||| ||  ||||||||||| | |||||||||  ||| ||||||| |||||||||||||||| |||  | ||||| ||||||||||    
T  38406177 agacatgcctgaa-tcatgttggaacattggttccaac-aacacaaacaagaatatttgttttagcaataataaatccaatacaaataccca 38406266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 745 - 886
Target Start/End: Complemental strand, 13941409 - 13941269
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaaca 843  Q
    ||||||| |||||  || ||| |||||||| |||| |||||||||||||| ||| | ||||||| |||||||||||| | |  ||||||  ||| |||||    
T  13941409 aggcacattgaaccatgtcaggatgttggaacatcatatccaacatcttacaaaaatgcctaaa-acatgttggaacatggtatccaaca-acacaaaca 13941312  T
Q  844 aggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     |||||||||||||||||| |||||||||||| |||| |||||    
T  13941311 tggatatttgttttagcaataatgcagccaatacaaaaaccca 13941269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 564 - 644
Target Start/End: Complemental strand, 9422778 - 9422697
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcac 644  Q
    ||||||||||| ||||||||||||| ||||||| |  ||||||||||| ||||||||||| || ||| ||||||||||||||    
T  9422778 tgaaattctagtgcacttgttttaatatgttctgtcagatgttttaacatttgcaatgttccgtttagtgttccaacatcac 9422697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 698 - 776
Target Start/End: Complemental strand, 22245800 - 22245722
Alignment:
Q  698 tgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagc 776  Q
    |||||||||||| |||||   ||||| ||||||  | |||||||||| |||||||||||| ||||||| ||||||||||    
T  22245800 tgtttccttaaagaataaagtgcgcgggtacaaacaagcgagaactcgggcacactgaaccgtgccaggatgttggagc 22245722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 601 - 655
Target Start/End: Complemental strand, 23420834 - 23420780
Alignment:
Q  601 atgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataagcag 655  Q
    ||||||| |||||| ||||||||||||||||||| || |||||| ||||||||||    
T  23420834 atgttttgacgtttacaatgttacgattaatgtttcatcatcacacgataagcag 23420780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 135; Significance: 8e-70; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 17235310 - 17235500
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||| |||||||||||||  | ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||     
T  17235310 attgtttccttaaacaataacgggcgcgcgtacaaacatgcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttac 17235409  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  17235410 agagacgcctaaacacatgttggaacattgattccaacttacaaaacaaagatatttgttttagcaacaatgcagtcaatacaaataccca 17235500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 13196040 - 13196230
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||   |||||||||||  |||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  13196040 attgtttccttaaacaataaagggcgcatatacaagtaggcatgaacccaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttat 13196139  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  13196140 agagatgtctaaacacatgttggaacattggttccaacttacaaaacaaggatatttgttttagcaataatgcagccaatacaaataccca 13196230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 33666507 - 33666695
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||||||| ||  ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||      
T  33666507 attgtttccttaaacaataaagggtgcgcgtaaaaacaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcatatccaacatcttcc 33666606  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||||||| ||| | |||||||||||||  | |||||||||||||||||||||||||||||||||| ||||||||||    
T  33666607 aaagacgcctaaacacatgttgaaacattggttccaacttac--atcaaggatatttgttttagcaacaatgcagccaatacaaataccca 33666695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 8465110 - 8464920
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||| ||||||||||||  ||||||||||||||||||   |||| |||||||||| ||| ||||||| |||||||| ||| |||||||||||||||     
T  8465110 attgttttcttaaacaataaagggcgcgcgtacaagtaggaatgaacccaggcacactaaaccgtgccaggatgttggaacattgtatccaacatcttaa 8465011  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||||||||||||| | |||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||||||||    
T  8465010 aaagaggcctaaacacatgttggaacattggttccaacttacacaacaaggatatttattttagcaataatgcagccaatacaaataccca 8464920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 9281153 - 9280963
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||| |||||||||| |  |||||| ||||||  ||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||      
T  9281153 attgttttcttaaacaatgaagggcgcgtgtacaaacaggcgagaactcaggcacactgaatcgtgccaggatgttggagcatcatatccaacatctttc 9281054  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||    
T  9281053 agagacgcctaaacacatgttgaaactttggttccaacttacaaaacaagaatatttgttttagcaacaatgtagccgatacaaataccca 9280963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 23879601 - 23879791
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||| ||||||  ||| || |||||||||||||||||| ||||||| |||||||||||||||||||||||||||      
T  23879601 attgtttccttaaacaataaagggtgcgtgtacaaacaggtgaaaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttcc 23879700  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| ||||| |||||||||||| | | |||||||||||||||||||||||||||||| |||  |||||||||    
T  23879701 agagacgcctaaacacatgttgaaactttggttccaacttatagatcaaggatatttgttttagcaacaatgcagctaatagaaataccca 23879791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 25970393 - 25970583
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| || ||||  ||| || |||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||     
T  25970393 attgtttccttaaacaataaagggcgcacgcacaaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagcatcatatccaacatcttac 25970492  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  25970493 agagacgcctaaacacatgttggaacattggttccaacttatagaacaaagatatttgttttagcaacaatgcagcaaatacaaataccca 25970583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 25974833 - 25975023
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| || ||||  ||| || |||||||||||||||||| ||||||  ||||||||||||| ||||||||||||||     
T  25974833 attgtttccttaaacaataaagggcgcacgcacaaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagcatcatatccaacatcttac 25974932  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||||||| | |||||||||||| | ||||| |||||||||||||||||||||||||| ||| ||||||||||    
T  25974933 agagacgcctaaacacatgttggaacattggttccaacttatagaacaaagatatttgttttagcaacaatgcagcaaatacaaataccca 25975023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 700 - 886
Target Start/End: Original strand, 19168166 - 19168352
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaag 799  Q
    ||||||||||||||||    |||||||||||||||||  |||| |||||||||| ||| ||||||| |||||||||||||||| |||||||  |||| ||    
T  19168166 tttccttaaacaataaagaacgcgcgtacaagtaggcatgaacccaggcacactaaaccgtgccaggatgttggagcatcgtacccaacattctatagag 19168265  T
Q  800 acgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| | |||||||||||||| | ||||||||||| |||||||||||||||||||||| ||||||||||    
T  19168266 atgcctaaacacatgttggaacattggttccaacttacacatcaaggatatttattttagcaacaatgcagccaatacaaataccca 19168352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 17855911 - 17856101
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || || |||||||  | || |||||||||||||||||||| |||| || |||||| ||||||| ||||||||||||      
T  17855911 attgtttccttaaacaataaagggtgcacgtacaaacaagcaagaactcaggcacactgaaccgtgctaggatgttgaagcatcgcatccaacatcttcc 17856010  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||||||||||||| |||||||||||| | |||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||    
T  17856011 agagacgcctaaacaaatgttggaactttgattccaacttacagatcaaggatatttgttttagcaacaatgcatccaatacaaataccca 17856101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 21722850 - 21722661
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||| |||  ||||| ||||| ||||||||||||||  |||||| |||||||| ||| |||||||||||||||     
T  21722850 attgtttccttaaacaataaagggcgcgcg-acatataggcaagaacccaggcacactgaaccatgccaggatgttggaacattgtatccaacatcttac 21722752  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||  |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  21722751 agagttgcctaaccacatgttggaactttggttccaacttacagaacaaggatatttgttttagcaataatgcagctaatacaaataccca 21722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 696 - 883
Target Start/End: Complemental strand, 19894111 - 19893924
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||| ||||||  | || ||| ||||  ||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||      
T  19894111 attgtttccttaagcaataaaggtcgtgcgcacaaaaaggcgagaattcaggcacactgaaccgtgccaagatgttggagcatcgtatccaacatcttcc 19894012  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    | ||| |||||||||||||||| | ||| |||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||||    
T  19894011 agagatgcctaaacacatgttgaatctttggttccaacttacagaacaaggatatttgttttagcagcaacgcagccaatacaaatac 19893924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 19077859 - 19078045
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||||||||| |  ||||| |||||| ||||||  || |||||||||||||||| ||||||  |||||||| |||||||||||||||||||     
T  19077859 attgtttccttaaacaatgaagggcgcacgtacatgtaggcatgagctcaggcacactgaaccgtgccaagatgttggaacatcgtatccaacatcttac 19077958  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||| | ||||||||||||||||||||    ||||||||||||| | |||| ||||||||||||| |||||| |||||||| ||||||||||    
T  19077959 aaacatgcctaaacacatgttggaac----gttccaacttacacatcaagaatatttgttttagaaacaattcagccaatacaaataccca 19078045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 20653785 - 20653976
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||||| ||||||||  |||| ||| |||||||||| || |||| || ||||| ||||  ||||||||||||||    
T  20653785 attgtttccttaaacaataaagggcgcgcgtaaaagtaggcatgaacccagacacactgaaccgttccaggatcttggaacatcacatccaacatcttat 20653884  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| | | || ||||||||| | | |||||||||||||||||||| ||||||| |||| ||||||||||    
T  20653885 agagatgcctaaacacatgttggaacattgatttcaacttacacacataaggatatttgttttagcaataatgcagacaatacaaataccca 20653976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 696 - 873
Target Start/End: Complemental strand, 13869845 - 13869670
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||| ||||||||||||||  || || ||||||  |||||||||||||| ||||||||||| ||||||| ||||||||  || | |||||||||||||     
T  13869845 attgtgtccttaaacaataaagggtgcacgtacatataggcgagaactcaagcacactgaaccgtgccaggatgttggaaaattgcatccaacatcttac 13869746  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagcca 873  Q
    ||||| |||||||||||||||| ||| | |||||||||||||  | |||||||||||||||||||||||||| |||||    
T  13869745 aaagatgcctaaacacatgttgaaacattggttccaacttac--atcaaggatatttgttttagcaacaatgtagcca 13869670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 20989233 - 20989043
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||| |||||||   |||| |||||||||||||  ||||  || |||||||||| |||  || ||||| || |||||||||||| ||||||     
T  20989233 attgtttccttatacaataaagcgcgctcgtacaagtaggcatgaaccaagacacactgaaccgtgtgaggatgtttgaacatcgtatccaatatcttac 20989134  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| ||||||||||||||||||||||  ||||||||||||| | |||| ||||||||||||||||||||||| ||||| ||||||||||    
T  20989133 atagatgcctaaacacatgttggaacttttgttccaacttacacagcaagaatatttgttttagcaacaatgcatccaatacaaataccca 20989043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 696 - 883
Target Start/End: Complemental strand, 21705973 - 21705786
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||| ||||||||||||  ||||||| || |  ||||| ||||| |||||||||||||   |||||  || ||||| ||| ||||||||||||||||    
T  21705973 attgtttacttaaacaataaagggcgcgcataaatataggcaagaacccaggcacactgaagcatgccaagatattggaacattgtatccaacatcttat 21705874  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    | ||  |||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||||| ||||| |||||||    
T  21705873 agagttgcctaaccacatgttggaactttggttccaacttagagaacaaggatatttgttttagcaataatgcatccaatacaaatac 21705786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 778 - 871
Target Start/End: Original strand, 19100673 - 19100766
Alignment:
Q  778 tcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagc 871  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| | |||||||||| | ||||||||||||||||||||||||||||||||    
T  19100673 tcgtatccaacatcttatagagatgcctaaacacatgttggaactttgattccaacttatagaacaaggatatttgttttagcaacaatgcagc 19100766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 696 - 875
Target Start/End: Complemental strand, 17863917 - 17863738
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| ||||||| |||||  |||| ||||||  |||||| |||| |  |||||  | |||| ||||| ||||||||     
T  17863917 attgtttccttaaacaataaagggcgcacgtacaaataggcatgaacccaggcagtctgaaccgtgctacgatgttaaaacatcatatccgacatcttac 17863818  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaat 875  Q
    | ||| |||||||||||||||||||| | |||||||||  ||| |||||||||||||||||||||||||||||||||||||    
T  17863817 agagatgcctaaacacatgttggaacattggttccaac-aacacaaacaaggatatttgttttagcaacaatgcagccaat 17863738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 739 - 886
Target Start/End: Complemental strand, 11992421 - 11992274
Alignment:
Q  739 gaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca 838  Q
    |||| |||||||||||||  |||| || |||||| | ||| ||||||||||||||| | ||  | |||| ||||||||||||| | ||||||||||||||    
T  11992421 gaacccaggcacactgaatcgtgctaggatgttgaaacattgtatccaacatcttacagagttgtctaaccacatgttggaacattggttccaacttaca 11992322  T
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     ||||||||||||||||||||||| |||||||||||  ||||||||||    
T  11992321 gaacaaggatatttgttttagcaataatgcagccaacacaaataccca 11992274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 564 - 655
Target Start/End: Original strand, 14258759 - 14258851
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataagcag 655  Q
    ||||||| || |||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14258759 tgaaattttaacgcacttgttttaatatgttttttatgatgttttaacgtttgcaatgttacgattaatgtttcaacatcacgcgataagcag 14258851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 559 - 651
Target Start/End: Complemental strand, 13870611 - 13870518
Alignment:
Q  559 ccttttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||| ||||||||||||||||||||||||| |||||||  ||||||||| | ||||||||||||||||||||||||| ||||||||||||||||    
T  13870611 ccttatgaaattctagcgcacttgttttaatatgttctgaatgatgtttcagcgtttgcaatgttacgattaatgtttcaacatcacgcgataa 13870518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 739 - 886
Target Start/End: Complemental strand, 12385258 - 12385112
Alignment:
Q  739 gaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaa-cttac 837  Q
    |||| |||||||||||||| ||||||| |||||||| ||||||||||||||||||| | ||| ||||||| |||||||||||| | |  |||||   |||    
T  12385258 gaacccaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctaaa-acatgttggaacattgtctccaataatac 12385160  T
Q  838 aaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     |||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  12385159 -aaacaatgatatttgttttagcaataatgcagccaatacaaataccca 12385112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 567 - 645
Target Start/End: Complemental strand, 8465975 - 8465896
Alignment:
Q  567 aattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacg 645  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || | |||||||||||||||||    
T  8465975 aattctagcgcacttgttttaatatgttctatatgatgttttaacgtttgcaatgttccgttcaatgttccaacatcacg 8465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 707 - 880
Target Start/End: Complemental strand, 12039142 - 12038968
Alignment:
Q  707 aaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgccta 806  Q
    |||||||||  |||||||||| ||||||||  |||| ||| |||||||||| ||||||  |||||||| ||| | ||||||||||||| | ||| |||||    
T  12039142 aaacaataaagggcgcgcgtaaaagtaggcatgaacccagacacactgaaccgtgccaagatgttggaacattgcatccaacatcttacagagatgccta 12039043  T
Q  807 aacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaa 880  Q
    ||||||||||||||| |   || ||||||||| | | |||||||||||||||| ||| ||||||| |||| ||||    
T  12039042 aacacatgttggaacattaatttcaacttacacacataaggatatttgttttatcaataatgcagacaatacaaa 12038968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 20558151 - 20558239
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||| |||||||||||||||| ||||| | |||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  20558151 tgaaattcgagcgcacttgttttaatatgttatgtatgatgttttaacgtttgcgatgttacgttcaatgttccaacatcacgcgataa 20558239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 562 - 652
Target Start/End: Complemental strand, 20990077 - 20989986
Alignment:
Q  562 tttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataag 652  Q
    |||||||||||||| |||||||||||| ||||||| |||||||||||| | ||||||||||| |||| |||||||||||||||| |||||||    
T  20990077 tttgaaattctagctcacttgttttaatatgttctgtatgatgttttagcatttgcaatgttccgatcaatgttccaacatcacacgataag 20989986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 803 - 883
Target Start/End: Complemental strand, 17525672 - 17525592
Alignment:
Q  803 cctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    ||||||||||| ||| ||||| |||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||    
T  17525672 cctaaacacatattgaaactttggttccaacttaaagaacaaggatatttgttttagcaacaaagcagccaatacaaatac 17525592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 767 - 886
Target Start/End: Complemental strand, 20465285 - 20465165
Alignment:
Q  767 atgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaa 865  Q
    |||||||| |||| |||||||||||||||| ||| ||||||||||||||||||||    |||||||||| || |  |||||||||||||||| |||| ||    
T  20465285 atgttggaacatcatatccaacatcttatagagatgcctaaacacatgttggaacaattgttccaacttgcacattcaaggatatttgtttttgcaataa 20465186  T
Q  866 tgcagccaatccaaataccca 886  Q
    ||||| |||| ||||||||||    
T  20465185 tgcagacaatacaaataccca 20465165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 563 - 640
Target Start/End: Original strand, 19077412 - 19077490
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaaca 640  Q
    |||||||||||| ||||||||||||| ||||||| |||||| ||||||| |||||||||||||||| ||||||||||||    
T  19077412 ttgaaattctagtgcacttgttttaatatgttctgtatgatattttaacatttgcaatgttacgatcaatgttccaaca 19077490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 12039993 - 12039904
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||||| || | |||||||||| |||||| |||||    
T  12039993 ttgaaattctagcacacttgttttaatatgttctacacgatgttttaacgtttgcaatgtttcgttcaatgttccaatatcacgagataa 12039904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 698 - 814
Target Start/End: Original strand, 19172133 - 19172248
Alignment:
Q  698 tgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataa 797  Q
    ||||||||||||||||||  ||||||||||||||||| |  ||||  |||| || ||||| ||||||| ||||||||||||| || |||||||||||||     
T  19172133 tgtttccttaaacaataaagggcgcgcgtacaagtag-catgaacctaggctcattgaaccgtgccaggatgttggagcatcatacccaacatcttatag 19172231  T
Q  798 agacgcctaaacacatg 814  Q
    ||| || ||||||||||    
T  19172232 agatgcataaacacatg 19172248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 561 - 651
Target Start/End: Original strand, 17855040 - 17855131
Alignment:
Q  561 ttttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||| |||||||||||| | ||| | |||||||||||||  ||||| ||||||||||||||||| ||||||||| ||||||    
T  17855040 ttttgaaattctagcacacttgttttaatacgttttgtatgatgttttaatatttgcgatgttacgattaatgtttcaacatcacacgataa 17855131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 561 - 651
Target Start/End: Original strand, 33665639 - 33665730
Alignment:
Q  561 ttttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||     ||||||||||||||||||||||||  |||||||| ||||||    
T  33665639 ttttgaaattctagcgcacttgttttaatatgttctgtatgatgttacggtgtttgcaatgttacgattaatgttttaacatcacacgataa 33665730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 745 - 891
Target Start/End: Complemental strand, 26964947 - 26964803
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    ||||||||||||| ||| |||||||||||| |||| ||||||||||||  | || |   | ||| |||||||||||| | |  |||||| | ||| |||     
T  26964947 aggcacactgaaccgtgtcagaatgttggaacatcatatccaacatctcgtgaaaatttccaaa-acatgttggaacatagtatccaacat-caacacat 26964850  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaatacccaccact 891  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  26964849 ggatatttgttttagcaacaatgcagccaatacaaatacccaacact 26964803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 696 - 793
Target Start/End: Complemental strand, 17527327 - 17527230
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctt 793  Q
    ||||||| ||||||||||||  |||||| ||  ||  ||||||||||||| ||||||||||| ||||||| || |||| |||||||||||||||||||    
T  17527327 attgtttacttaaacaataaagggcgcgtgtggaaacaggcgagaactcaagcacactgaaccgtgccaggatattggggcatcgtatccaacatctt 17527230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 567 - 651
Target Start/End: Complemental strand, 19894820 - 19894735
Alignment:
Q  567 aattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||| |||||||||||| ||||||| |||||||||  |||||||| ||| |||||||||||||| |||||||| |||||||    
T  19894820 aattctagcacacttgttttaatatgttctgtatgatgttacaacgtttgtaatattacgattaatgtttcaacatcatgcgataa 19894735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 746 - 886
Target Start/End: Complemental strand, 29253074 - 29252932
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgt---atccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaac 842  Q
    |||||||||||| ||||||| |||||||| ||||||   ||||||||||||| | | | |||| ||| ||||||||||| | ||||||||| |   ||||    
T  29253074 ggcacactgaaccgtgccaggatgttggaacatcgtcgtatccaacatcttaaagacatgcctgaac-catgttggaacattggttccaacatcacaaac 29252976  T
Q  843 aaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||||| ||| ||||  |||||||||    
T  29252975 atggatatttgttttagcaacaatacagtcaatataaataccca 29252932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 9282019 - 9281931
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| | ||| | ||||||||||||| |||| |||||||| | | ||||||||||||||| |||||||    
T  9282019 tgaaattctagcgcacttgttttaatacgttatgtatgatgttttaaagttttcaatgttaagttcaatgttccaacatcaagcgataa 9281931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 13195172 - 13195260
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| ||| |||||||| |||||   |||||||||||| ||||||||||||||| ||||||||| ||||||||||| ||||    
T  13195172 tgaaattctagcacacgtgttttaatatgtttggtatgatgttttagcgtttgcaatgttacaattaatgtttcaacatcacgcaataa 13195260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 699 - 791
Target Start/End: Original strand, 24542373 - 24542465
Alignment:
Q  699 gtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||| ||||  ||| ||| ||||||||||||  |||| |||||| ||| ||| |||||||||||||||| ||||||||||||||||    
T  24542373 gtttccttaaataatactaggtgcgtgtacaagtaggcatgaacccaggcatactaaaccgtgccagaatgttggaacatcgtatccaacatc 24542465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 25948377 - 25948465
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| |  || | |||| ||||| | ||||||||||| ||||||||||||| ||||||||||||||||    
T  25948377 tgaaattctagcacacttgttttaatacattatgtatgttgtttcagcgtttgcaatgatacgattaatgtttcaacatcacgcgataa 25948465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 745 - 808
Target Start/End: Complemental strand, 23882092 - 23882029
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaa 808  Q
    ||||||||||||| ||| ||| |||||||| ||||||||||||||||||| ||||| |||||||    
T  23882092 aggcacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacaaagatgcctaaa 23882029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 564 - 642
Target Start/End: Complemental strand, 34991293 - 34991214
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatc 642  Q
    |||||||||||||||||| |||||| ||||||| |   |||||||||||| ||||||||| || ||||||||||||||||    
T  34991293 tgaaattctagcgcacttattttaatatgttctgtcatatgttttaacgtctgcaatgttccgtttaatgttccaacatc 34991214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 17234440 - 17234528
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| || || | ||||||||||   | |||||||||||||||||||| || |||||||||| |||||    
T  17234440 tgaaattctagcacacttgttttaatatattatgtatgatgtttcggcatttgcaatgttacgattaatatttcaacatcacgtgataa 17234528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 563 - 645
Target Start/End: Complemental strand, 17864723 - 17864640
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacg 645  Q
    |||||||||||||||||||||||||| ||||| | || ||||||| ||||||| ||||||  || | |||||| ||||||||||    
T  17864723 ttgaaattctagcgcacttgttttaatatgttatgtaagatgtttcaacgtttacaatgtaccgttcaatgttgcaacatcacg 17864640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 21717818 - 21717767
Alignment:
Q  600 gatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||| |||||||||||| || ||||||||||||||||||| |||||    
T  21717818 gatgttttaatgtttgcaatgttccgtttaatgttccaacatcacgtgataa 21717767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 651
Target Start/End: Complemental strand, 21725654 - 21725603
Alignment:
Q  600 gatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||| |||||||||||| || ||||||||||||||||||| |||||    
T  21725654 gatgttttaatgtttgcaatgttccgtttaatgttccaacatcacgtgataa 21725603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 839 - 886
Target Start/End: Complemental strand, 23880991 - 23880944
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  23880991 aaacatggatatttgttttagcaataatgcagccaatacaaataccca 23880944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 739 - 794
Target Start/End: Original strand, 25806167 - 25806222
Alignment:
Q  739 gaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    |||| ||| |||||||||| ||||||| |||||||| |||||||||||||||||||    
T  25806167 gaacccagacacactgaaccgtgccaggatgttggaacatcgtatccaacatctta 25806222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 886
Target Start/End: Complemental strand, 15930242 - 15930102
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaaca 843  Q
    ||||||||||||| ||||||| |||||||| |||||||||||| |||||| | ||| |||| || ||||||| |||| | |  || |||  ||| |||||    
T  15930242 aggcacactgaaccgtgccaggatgttggaacatcgtatccaatatcttacagagatgcctgaa-acatgtttgaacattgtatcaaac-aacacaaaca 15930145  T
Q  844 aggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     | |||||||||||||||| |  ||||||||| ||||||||||    
T  15930144 tgaatatttgttttagcaatatagcagccaatacaaataccca 15930102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 794
Target Start/End: Original strand, 19598446 - 19598495
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||| ||| ||| |||||||| |||||||||||||||||||    
T  19598446 aggcacactgaaccgtgtcaggatgttggaacatcgtatccaacatctta 19598495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 839 - 884
Target Start/End: Original strand, 19598529 - 19598574
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||    
T  19598529 aaacatggatatttgttttagcaataatgcagccaattcaaatacc 19598574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 15897984 - 15897896
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||| | |||||||||||| ||||| | || ||||||||||||| |||||||||  | | || ||| ||||||||||||||||    
T  15897984 tgaaattctaacacacttgttttaatatgttatgtacgatgttttaacgtatgcaatgttttgttcaaggtttcaacatcacgcgataa 15897896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 563 - 642
Target Start/End: Original strand, 25805301 - 25805381
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatc 642  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||| | |||||  |||||| || | |||||| |||||||    
T  25805301 ttgaaattctatcgcacttgttttaatatgttctgtatgatgtttaagcgtttataatgtttcgttcaatgtttcaacatc 25805381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 839 - 886
Target Start/End: Complemental strand, 3566151 - 3566104
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||| ||||||| |||||||||||| ||||||||||    
T  3566151 aaacatggatatttgtattagcaataatgcagccaatacaaataccca 3566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 840 - 886
Target Start/End: Complemental strand, 34991205 - 34991158
Alignment:
Q  840 aacaaggatatttgtttt-agcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||| ||||||||||||| |||| ||||||||||    
T  34991205 aacaaggatatttgtttttagcaacaatgcagtcaatacaaataccca 34991158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 841 - 886
Target Start/End: Complemental strand, 21316938 - 21316893
Alignment:
Q  841 acaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||||||||| |||| ||||||| ||||||||||    
T  21316938 acaagaatatttgttttagcaataatgaagccaatacaaataccca 21316893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 791
Target Start/End: Complemental strand, 21316986 - 21316941
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||||| |||||| |||||||| |||| |||||||||||    
T  21316986 ggcacactgaactatgccaggatgttggaacatcatatccaacatc 21316941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 790
Target Start/End: Complemental strand, 34639600 - 34639555
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacat 790  Q
    ||||||||||||| ||||||  |||||||| |||||||||||||||    
T  34639600 aggcacactgaaccgtgccaagatgttggaacatcgtatccaacat 34639555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 131; Significance: 2e-67; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 1811 - 1621
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||     
T  1811 attgtttccttaaacaataaagggcgcgcatacaaataggcgagaactcaggcacactgaaccgtgccagaatgttggaacatcgtatccaacatcttac 1712  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||||||| ||| | |||| ||||||||| |||| |||||||||||||||||| |||||||||||| ||||||||||    
T  1711 aaagacgcctaaacacatgttgaaacattggtttcaacttacagaacagggatatttgttttagcaataatgcagccaatacaaataccca 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 2e-67; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 16384606 - 16384796
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||||||||  |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||      
T  16384606 attgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaacccaggcacactgaactgtgtcaggatgttggagcatcgtatccaacatcttcc 16384705  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16384706 agagacgcctaaacacatgttggaacattggtttcaacttacacaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 16384796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 696 - 893
Target Start/End: Complemental strand, 18601103 - 18600906
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| | |||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||      
T  18601103 attgtttccttaaacaataaagggcgcacatacaaccaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttcc 18601004  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccacttt 893  Q
    | |||||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    
T  18601003 acagacgcctaaacacatgttgaaacattggttccaacttacagaacaaggatatttgttttagcaacaatacagccaatacaaatacccaacacttt 18600906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 696 - 891
Target Start/End: Complemental strand, 23399639 - 23399444
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||||| |||||  |||||||||||||  | ||||||||||||||||||| ||| ||||||| |||||| ||||||| ||||||||||||      
T  23399639 attgtttccttaaataataaagggcgcgcgtacaaacaagcgagaactcaggcacactaaaccgtgccaggatgttgaagcatcgcatccaacatcttcc 23399540  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccact 891  Q
    | |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||| ||||    
T  23399539 agagacgcctaaacacatgttgaaactttggttccaacttacagaacaaggatatttattttagcaacaatgcagccaatacaaatacccaacact 23399444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 696 - 891
Target Start/End: Original strand, 25117572 - 25117767
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   |||||||||||| |||||||||||||| |||  |||||  ||||||| |||||||||||||||||||||||||||      
T  25117572 attgtttccttaaacaataaagagcgcgcgtacaaataggcgagaactcatgcaacctgaagcgtgccaggatgttggagcatcgtatccaacatcttcc 25117671  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccact 891  Q
    | ||||||||||| |||||||| ||||| |||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  25117672 agagacgcctaaatacatgttgaaactttggttccaacttacagatcaaggatatttgttgtagcaacaatgcagccaatacaaatacccaacact 25117767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 696 - 857
Target Start/End: Complemental strand, 33898452 - 33898292
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||||||||||   |||||||||| |||||| ||||||| || | || |||||||||||||||||| ||||||||      
T  33898452 attgtttccttaaacaataaagggcgcgcgtacatacaggcgagaacgcaggcatactgaaccgtacgaggatgttggagcatcgtatctaacatcttcc 33898353  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgtttt 857  Q
    |||||||||||||||||||||| ||| | |||||||||||||| ||||| ||||||||||||    
T  33898352 aaagacgcctaaacacatgttgaaacattggttccaacttacagaacaa-gatatttgtttt 33898292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 700 - 895
Target Start/End: Original strand, 28020023 - 28020218
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaag 799  Q
    ||||||||||||||||  ||| |||| ||||  | | |||||||||  |||||||||| ||||||| |||||| ||||||  ||||||||||||  | ||    
T  28020023 tttccttaaacaataaagggctcgcgaacaaacatgtgagaactcattcacactgaaccgtgccaggatgttgaagcatcacatccaacatcttccagag 28020122  T
Q  800 acgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccacttttt 895  Q
    |||||||||||||||||| ||||| | |||||||||||| | ||||| ||||| ||||||||||||||||| |||| |||||||||| ||| ||||    
T  28020123 acgcctaaacacatgttgaaactttgattccaacttacagatcaaggttatttattttagcaacaatgcagtcaatacaaatacccaacacatttt 28020218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 747 - 886
Target Start/End: Original strand, 10724964 - 10725103
Alignment:
Q  747 gcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaag 845  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||| | ||| ||||| ||| |||||||||| | |||||||||  ||| |||||||    
T  10724964 gcacactaaactgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctacacatatgttggaacattggttccaac-aacacaaacaag 10725062  T
Q  846 gatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  10725063 gatatttgttttagcaataatgcagccaatacaaataccca 10725103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 747 - 886
Target Start/End: Original strand, 10938733 - 10938872
Alignment:
Q  747 gcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaag 845  Q
    ||||||| ||||||||||| |||||||| ||||||||||||||||||| | ||| ||||| ||| |||||||||| | |||||||||  ||| |||||||    
T  10938733 gcacactaaactgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctacacatatgttggaacattggttccaac-aacacaaacaag 10938831  T
Q  846 gatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||||||||||||||| |||||||||||| ||||||||||    
T  10938832 gatatttgttttagcaataatgcagccaatacaaataccca 10938872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 776 - 886
Target Start/End: Complemental strand, 15161866 - 15161756
Alignment:
Q  776 catcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaa 874  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||| | |||||||||  ||| |||||||||||||||||||| ||| |||||||||||    
T  15161866 catcgtatccaacatcttacagagatgcctaaacacatgttggaacattggttccaac-aacacaaacaaggatatttgttttaacaataatgcagccaa 15161768  T
Q  875 tccaaataccca 886  Q
    | ||||||||||    
T  15161767 tacaaataccca 15161756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 563 - 651
Target Start/End: Original strand, 16383737 - 16383826
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||||||||||| ||||||| || |||||| |  |||||| |||||||||||||||||| ||||||||||||||||    
T  16383737 ttgaaattctagcgcacttgttttaatatgttctgtaagatgttatggcgtttgtaatgttacgattaatgtttcaacatcacgcgataa 16383826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 10190735 - 10190823
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| ||||||| |||||||||| | | |||||||||||| |||||||||| |||||||| |||||||    
T  10190735 tgaaattctagcgcacttgttttaatatgttctgtatgatgtttcagcatttgcaatgttaagattaatgtttcaacatcaagcgataa 10190823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 746 - 884
Target Start/End: Complemental strand, 15699729 - 15699592
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaa 844  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||  | | || | ||| ||||||||||| | |  ||||||  ||| ||||||    
T  15699729 ggcacactgaactgtgccaggatgttggaacatcggatccaacatcttatggacatgcttgaac-catgttggaacattgcatccaaca-acacaaacaa 15699632  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
    ||||||||||||||| ||||||||||||||| ||||||||    
T  15699631 ggatatttgttttagtaacaatgcagccaatacaaatacc 15699592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 563 - 651
Target Start/End: Original strand, 8163630 - 8163719
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||||||||||| | ||| | ||||||||||||||||||   |||||||| | |||||||||||||||||||||||    
T  8163630 ttgaaattctagcgcacttgttttaatacgttatgtatgatgttttaacgtttatgatgttacgttcaatgttccaacatcacgcgataa 8163719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 699 - 886
Target Start/End: Complemental strand, 19183124 - 19182936
Alignment:
Q  699 gtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggc--acactgaactgtgccagaatgttggagcatcgtatccaacatcttata 796  Q
    ||||||||||| |||||   ||||| |||||| |||||  ||||||| ||  ||||||||| ||||||| ||||  || ||||||||||||||||||| |    
T  19183124 gtttccttaaataataaagagcgcgtgtacaaataggcatgaactcatgcgcacactgaaccgtgccaggatgtcagaacatcgtatccaacatcttaca 19183025  T
Q  797 aagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     ||| ||||||| |||||||||||| | |  ||||||  ||| ||  |||||||||||||||||||| |||| ||||||| ||||||||||    
T  19183024 gagatgcctaaa-acatgttggaacattgtatccaac-aacacaagtaaggatatttgttttagcaataatgtagccaatacaaataccca 19182936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 566 - 651
Target Start/End: Complemental strand, 33899491 - 33899405
Alignment:
Q  566 aaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||| |||||||||||| | ||||| |||||||||| | |||||||||||||| ||||||||||  |||||||||||||||    
T  33899491 aaattctagcacacttgttttaataggttctgtatgatgtttcagcgtttgcaatgttatgattaatgttttaacatcacgcgataa 33899405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 21477957 - 21478045
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||| |||||  |||| ||  | |||||||||||||||||||||||    
T  21477957 tgaaattctagcgcacttgttttaatacgttctgtatgatgttttaatgtttgtgatgtcacattcaatgttccaacatcacgcgataa 21478045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 25116672 - 25116760
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| | ||||| ||| |||||| | | ||| ||||||||||||||||||| ||||||||||||||||    
T  25116672 tgaaattctagcacacttgttttaatacgttctgtataatgtttcagcatttacaatgttacgattaatgtttcaacatcacgcgataa 25116760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 564 - 643
Target Start/End: Complemental strand, 15162798 - 15162718
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatca 643  Q
    ||||||||||||  ||||||||||| ||||| | || ||||||| ||||||||| ||||| ||||||||||||||||||||    
T  15162798 tgaaattctagcatacttgttttaatatgttatgtaagatgtttcaacgtttgcgatgtttcgattaatgttccaacatca 15162718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 720 - 867
Target Start/End: Original strand, 9069684 - 9069830
Alignment:
Q  720 cgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttgga 819  Q
    |||| |||||| |||||  ||| ||||||||||||||| || |||| |||||||| ||||||||||||||||||| | | | ||| ||| ||||||||||    
T  9069684 cgcgagtacaaataggcatgaaatcaggcacactgaaccgttccaggatgttggaacatcgtatccaacatcttacagaaatgccgaaa-acatgttgga 9069782  T
Q  820 acttcggttccaacttacaaaacaaggatatttgttttagcaacaatg 867  Q
    |  | |  |||||| |   ||||| || ||||||||||||||||||||    
T  9069783 aacttgtatccaacatcacaaacatgggtatttgttttagcaacaatg 9069830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 644
Target Start/End: Original strand, 10724107 - 10724189
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcac 644  Q
    ||||||||||| |||||||||||||| ||||| | || ||||||||| |||||| |||||| || | ||||||||||||||||    
T  10724107 ttgaaattctaacgcacttgttttaatatgttttgtaagatgttttaccgtttggaatgttccgttcaatgttccaacatcac 10724189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 563 - 644
Target Start/End: Original strand, 10937876 - 10937958
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcac 644  Q
    ||||||||||| |||||||||||||| ||||| | || ||||||||| |||||| |||||| || | ||||||||||||||||    
T  10937876 ttgaaattctaacgcacttgttttaatatgttttgtaagatgttttaccgtttggaatgttccgttcaatgttccaacatcac 10937958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 745 - 886
Target Start/End: Original strand, 15623201 - 15623341
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaaca 843  Q
    ||||| ||| ||| ||||||| |||||||| ||||||||||||||||||| | | | ||||||| |||||||||| | | |  |||||| |||| ||| |    
T  15623201 aggcatacttaaccgtgccaggatgttggaacatcgtatccaacatcttacagaaatgcctaaa-acatgttggatcatagtatccaac-tacacaaaga 15623298  T
Q  844 aggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     |||||||| |||| |||| |||||| ||||| ||||||||||    
T  15623299 tggatatttattttggcaataatgcaaccaatacaaataccca 15623341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 609 - 651
Target Start/End: Original strand, 28019198 - 28019240
Alignment:
Q  609 acgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  28019198 acgtttgtaatgttacgattaatgtttcaacatcacgcgataa 28019240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 839 - 884
Target Start/End: Original strand, 10683284 - 10683329
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||    
T  10683284 aaacatggatatttgttttagcaataatgcagccaatacaaatacc 10683329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 839 - 884
Target Start/End: Original strand, 10896924 - 10896969
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||    
T  10896924 aaacatggatatttgttttagcaataatgcagccaatacaaatacc 10896969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 696 - 757
Target Start/End: Complemental strand, 15161927 - 15161866
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaac 757  Q
    ||||||||||||||||||||  |||||| |||||| |||||  |||| ||||||||||||||    
T  15161927 attgtttccttaaacaataaagggcgcgtgtacaaataggcttgaacccaggcacactgaac 15161866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 791
Target Start/End: Original strand, 33746638 - 33746731
Alignment:
Q  699 gtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacac-tgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||| ||||  |||||||| |||||||||||  |||| ||| ||||| ||||| | ||||| ||||| || ||||||||||||||||    
T  33746638 gtttccttaaataatacaaggcgcgcatacaagtaggcatgaacccagacacacttgaaccgcgccaggatgttagaacatcgtatccaacatc 33746731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 10718241 - 10718285
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacat 790  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||    
T  10718241 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacat 10718285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 10932010 - 10932054
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacat 790  Q
    |||||||||||| ||||||| |||||||| |||||||||||||||    
T  10932010 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacat 10932054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 23400499 - 23400411
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| ||| ||| |||||||||    | |||| ||||||| |||||||||| |||||||||| |||||    
T  23400499 tgaaattctagcacacttgttttaatatgctctgtatgatgttacggcatttgtaatgttatgattaatgtttcaacatcacgtgataa 23400411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 10718511 - 10718558
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| ||||||||| |||||||| |||||||||||| ||||||||||    
T  10718511 aaacatggatatttgctttagcaataatgcagccaatacaaataccca 10718558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 10932280 - 10932327
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| ||||||||| |||||||| |||||||||||| ||||||||||    
T  10932280 aaacatggatatttgctttagcaataatgcagccaatacaaataccca 10932327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 847 - 886
Target Start/End: Original strand, 33744532 - 33744571
Alignment:
Q  847 atatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  33744532 atatttgttttagcaataatgcagccaatacaaataccca 33744571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 720 - 821
Target Start/End: Original strand, 19660156 - 19660255
Alignment:
Q  720 cgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttgga 819  Q
    ||||||||||| |||||  |||||||||||||||||||  |||||  |||||||| |||  ||||||| |||| |||  || |||||||| |||||||||    
T  19660156 cgcgcgtacaaataggcatgaactcaggcacactgaaccatgccacgatgttggaacattctatccaa-atctcatatggatgcctaaac-catgttgga 19660253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 791
Target Start/End: Original strand, 31971680 - 31971725
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||||||||| || |||||||| |||||||| |||||||    
T  31971680 ggcacactgaactgtgctaggatgttggaacatcgtatacaacatc 31971725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 845 - 882
Target Start/End: Original strand, 41786287 - 41786324
Alignment:
Q  845 ggatatttgttttagcaacaatgcagccaatccaaata 882  Q
    |||||||||||||||||| |||||||||||| ||||||    
T  41786287 ggatatttgttttagcaataatgcagccaatacaaata 41786324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 131; Significance: 2e-67; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 17135588 - 17135398
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||||||||||| |||||||||||||   |||||||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||      
T  17135588 attgtttccttaaacaataaaaggcgcgcgtacatagaggcgagaactcaggcacaccgaaccgtgccaggatgttggagcatcatatccaacatcttcc 17135489  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  17135488 agagacgcctaaacacatgttgaaactttggttccaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 17135398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 5e-65
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 7028514 - 7028324
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||||| |||||  ||||| ||||||| ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||      
T  7028514 attgtttccttaaataataaagggcgcacgtacaaataggcgagaactcagtcacactgaaccgtgccaaaatgttggagcatcgtatccaacatcttcc 7028415  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  7028414 agagacgcctaaacacatgttggcactttggttccaacttacagaacaaagatatttgttttagcaacaatgcagccaatacaaataccca 7028324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 696 - 891
Target Start/End: Original strand, 24196241 - 24196436
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |  |||| |||||  ||||||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||||||      
T  24196241 attgtttccttaaacaataaaggatgcgcatacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttgaagcatcgcatccaacatcttcc 24196340  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccact 891  Q
    | |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||| ||||    
T  24196341 agagacgcctaaacacatgttgaaactttggttccaacttagaaaacaaggatatttgtttttgcaacaatgcagccaatacaaatacccaacact 24196436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 18482816 - 18482626
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||||||||||  |||||||||||||| |||||||||| ||| ||| |||||| | |||||||||||||||||||     
T  18482816 attgtttccttaaacaataaagggtgcgcgtacaaacaggcgagaactcagacacactgaaccgtgtcaggatgttgaaacatcgtatccaacatcttac 18482717  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  18482716 agagacgcctaaacacatattggaactttggttccaacttacagaacaatgatatttgttttagcaataatgcagccaatacaaataccca 18482626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 23954001 - 23953811
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| |||| ||  | ||||||||||||||||||||||| |||| || ||||||||| || ||||| ||||||||      
T  23954001 attgtttccttaaacaataaagggcgcacgtataaacaagcgagaactcaggcacactgaaccgtgctaggatgttggaggattgtatctaacatcttcc 23953902  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||||||||||||||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  23953901 agagacgcctaaacacacgttgaaactttggttccaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 23953811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 696 - 892
Target Start/End: Complemental strand, 13515062 - 13514865
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgag-aactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||||||||||  ||||| || |||||||||| || |||||| ||||||||||| |||| || |||||||| |||||||||||||||||||    
T  13515062 attgtttccttaaacaataaagggcgcacgcacaagtaggcaagtaactcaagcacactgaaccgtgctaggatgttggaacatcgtatccaacatctta 13514963  T
Q  795 taaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccactt 892  Q
     | ||| || ||||||||||||||||| | |||||||||||||| | | |||||||||||||||||||||||||||||||| |||||||||| |||||    
T  13514962 cagagatgcttaaacacatgttggaacattggttccaacttacacatcgaggatatttgttttagcaacaatgcagccaatacaaatacccaacactt 13514865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 696 - 884
Target Start/End: Original strand, 13791393 - 13791581
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||||||||  ||||||||||||||||||| |||||  || ||| |||||| ||||| ||||||||||||||      
T  13791393 attgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcaggcacattgaaccatgtcaggatgttgaagcattgtatccaacatcttcc 13791492  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacc 884  Q
    | ||||| |||||||||||||| ||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||  |||||||    
T  13791493 agagacgtctaaacacatgttgaaacattggtttcaacttacagaacaaggatatttgttttagcaacaatgcagccaataaaaatacc 13791581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 1918687 - 1918497
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| |||||||  | ||||||||||||||||||||||| |||| || |||||| ||||||| || |||||||||      
T  1918687 attgtttccttaaacaataaagggcgcacgtacaaacatgcgagaactcaggcacactgaaccgtgctaggatgttgaagcatcgcatacaacatcttcc 1918588  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||||  |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||| |||||||||| | ||| ||||||||||    
T  1918587 agagacctctaaacacatgttgaaactttggttccaacttacagaacaaggatatttgttttaccaacaatgcaacaaatacaaataccca 1918497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 15572446 - 15572259
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || | |||||||| ||| ||| ||||||||||||||||||  |||||  ||||| |||| | |||||||||||||||     
T  15572446 attgtttccttaaacaataaagggtgtgcgtacaaatagccgataactcaggcacactgaaccttgccaacatgttagagcgttgtatccaacatcttac 15572347  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||||||||||||||   || |||| | |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  15572346 agagacgcctaaacac---tttgaacattggttccaacttacagatcaaggatatttgttttagcaacaatgcagccaatacaaataccca 15572259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 20627086 - 20626895
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||  | |||||||||||  |||| ||| |||||| ||| ||||||| |||||||| ||| |||||||| ||||||     
T  20627086 attgtttccttaaacaataaagggcgtacatacaagtaggcatgaacccagacacactaaaccgtgccaggatgttggaacattgtatccaatatcttac 20626987  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| | | |||||||||||| | |||||||||||||||||||||| ||  || ||||| ||||||||||    
T  20626986 agagatgcctaaacacatgttggaacattgattccaacttacacatacaaggatatttgttttagcaataacacatccaatacaaataccca 20626895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 739 - 886
Target Start/End: Original strand, 21547542 - 21547689
Alignment:
Q  739 gaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca 838  Q
    |||||||| |||||||||||||| ||| | |||||| ||||||||||||||||||||| ||| || ||||||||||||||||| | |||||||||  |||    
T  21547542 gaactcagacacactgaactgtgtcaggaagttggaacatcgtatccaacatcttatagagatgcataaacacatgttggaacattggttccaac-aaca 21547640  T
Q  839 -aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     ||||||| |||||| ||||||||| |||||||||||| ||||||||||    
T  21547641 caaacaagaatatttattttagcaataatgcagccaatacaaataccca 21547689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 696 - 883
Target Start/End: Complemental strand, 18063650 - 18063463
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||||||||| | |||||| ||||||  ||||| |||||  ||||||||||||| ||||||| |||||||| | |||||||||||||||||     
T  18063650 attgtttccttaaacaatgaaaggcgcacgtacatataggcaagaaccaaggcacactgaaccgtgccaggatgttggaacgtcgtatccaacatcttac 18063551  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    ||||| |||||| || | |||| ||| | |||||||||     | ||||||||||||||||||||||| ||| | ||||| |||||||    
T  18063550 aaagatgcctaatcatacgttgaaacattggttccaacaccacatacaaggatatttgttttagcaactatgtaaccaatacaaatac 18063463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 20748473 - 20748384
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||||||||||| ||||| | |||||||||||||||||||| |||||||| | |||||||||||||||||||||||    
T  20748473 ttgaaattctagcgcacttgttttaatatgttttgtatgatgttttaacgtttgcgatgttacgttcaatgttccaacatcacgcgataa 20748384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 759 - 885
Target Start/End: Original strand, 28051917 - 28052043
Alignment:
Q  759 gtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgtttt 857  Q
    ||||||| |||||||| ||||||||||||||||||| | ||| |||||||||||||||||||| | |||||||||  ||| ||| || ||||||||||||    
T  28051917 gtgccaggatgttggaacatcgtatccaacatcttacagagatgcctaaacacatgttggaacattggttccaac-aacacaaataaagatatttgtttt 28052015  T
Q  858 agcaacaatgcagccaatccaaataccc 885  Q
    ||||| |||||| ||||| |||||||||    
T  28052016 agcaataatgcaaccaatacaaataccc 28052043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 44452329 - 44452417
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| ||||||| |  ||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  44452329 tgaaattctagcgcacttgttttaatatgttctgtcagatgttttaacgtttgcaatgtttcgtttaatgttccaacatcacgtgataa 44452417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 13790528 - 13790616
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| ||||||| |||||||||    ||||||||||||||||||||||||| ||||||||||||||||    
T  13790528 tgaaattctagcacacttgttttaatatgttctgtatgatgttacggcgtttgcaatgttacgattaatgtttcaacatcacgcgataa 13790616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 19633736 - 19633824
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||| ||||||||||| ||||| |  |||||||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  19633736 tgaaattctagcgtacttgttttaatatgttttgcatgatgttttaacgtttgcaatgttacgttcaatgttccaacatcatgcgataa 19633824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 561 - 651
Target Start/End: Complemental strand, 15636186 - 15636095
Alignment:
Q  561 ttttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||| |||||||||||| | ||||| | |||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||    
T  15636186 ttttgaaattctagcacacttgttttaatacgttctgtttgatgttttagcgttttcaatgctacgattaatgtttcaacatcacgcgataa 15636095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 1919546 - 1919457
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||||||||||| | ||||| |||| |||||   ||||||||||||||| ||||||||| ||||||||||||||||    
T  1919546 ttgaaattctagcgcacttgttttaatacgttctgtatgttgtttccgcgtttgcaatgttacaattaatgtttcaacatcacgcgataa 1919457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 19532193 - 19532105
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||| ||||||| |||||||||||| |||||||||||||||||  | ||||| |||||||||||| |||||| ||||||||||||||||    
T  19532193 tgaatttctagcacacttgttttaatatgttctatatgatgttacagcgttttcaatgttacgatcaatgtttcaacatcacgcgataa 19532105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 748 - 886
Target Start/End: Complemental strand, 286291 - 286154
Alignment:
Q  748 cacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaagga 847  Q
    |||||||||| |||| || |||||||| ||||||||||||||||||| | ||| |||| || |||||||||||| | |  |||||| |   ||||| | |    
T  286291 cacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacagagatgcctgaa-acatgttggaacatagtatccaacatcacaaacatgaa 286193  T
Q  848 tatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||  ||||||||||| ||||||||||    
T  286192 tatttattttagcaatgatgcagccaatacaaataccca 286154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 696 - 793
Target Start/End: Original strand, 19634594 - 19634692
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagt-aggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctt 793  Q
    |||||||||  |||||||||| ||||| |||||||   ||| ||||||||||||||||||||| |||||||  |||||||||||| |||||| ||||||    
T  19634594 attgtttccgaaaacaataacgggcgcacgtacaaaccaggtgagaactcaggcacactgaaccgtgccaggttgttggagcatcatatccagcatctt 19634692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 296255 - 296302
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  296255 aaacaaggatatttgttttagcaacaatgcaaccaatacaaataccca 296302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 839 - 886
Target Start/End: Complemental strand, 3551781 - 3551734
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  3551781 aaacatggatatttgttttagcaataatgcagccaatacaaataccca 3551734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 748 - 875
Target Start/End: Complemental strand, 6578940 - 6578814
Alignment:
Q  748 cacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaagga 847  Q
    |||||||||| ||| ||| |||||||| ||||||||||||||||||| | | | ||||||| ||||||||| |  |||  |||||| |   ||||| |      
T  6578940 cacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacagaaatgcctaaa-acatgttggcaactcgtatccaacatcacaaacatgag 6578842  T
Q  848 tatttgttttagcaacaatgcagccaat 875  Q
    |||||||||||||||||||| |||||||    
T  6578841 tatttgttttagcaacaatgaagccaat 6578814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 28052193 - 28052240
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  28052193 aaacaaggatatttgttttaacaataatgcagccaatacaaataccca 28052240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 840 - 886
Target Start/End: Original strand, 44453136 - 44453183
Alignment:
Q  840 aacaaggatatttgtttt-agcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||    
T  44453136 aacaaggatatttgtttttagcaacaatgcagccaatacaaataccca 44453183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 696 - 774
Target Start/End: Original strand, 296157 - 296235
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttgga 774  Q
    ||||||||||||||||||||  ||||| ||||||| || ||  |||| |||||||||||||| ||||||| || |||||    
T  296157 attgtttccttaaacaataaagggcgcacgtacaaatatgcatgaacccaggcacactgaaccgtgccaggattttgga 296235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 746 - 794
Target Start/End: Complemental strand, 15674231 - 15674183
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    |||||||||||||||||||  |||||||  |||||||||||||||||||    
T  15674231 ggcacactgaactgtgccaagatgttgggacatcgtatccaacatctta 15674183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 739 - 791
Target Start/End: Complemental strand, 17042160 - 17042108
Alignment:
Q  739 gaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    |||| |||||||||||||| ||||||| |||| ||| ||||||||||||||||    
T  17042160 gaacccaggcacactgaaccgtgccaggatgtcggaacatcgtatccaacatc 17042108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 839 - 882
Target Start/End: Complemental strand, 6578622 - 6578579
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaata 882  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||    
T  6578622 aaacatggatatttgttttagcaataatgcagccaatacaaata 6578579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 794
Target Start/End: Complemental strand, 3551873 - 3551824
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||| ||||||  |||||||| |||| ||||||||||||||    
T  3551873 aggcacactgaaccgtgccacgatgttggaacatcatatccaacatctta 3551824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 791
Target Start/End: Original strand, 13914544 - 13914589
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||||||||| || ||| |||| ||||||||||||||||    
T  13914544 ggcacactgaactgtgctaggatgatggaacatcgtatccaacatc 13914589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 791
Target Start/End: Original strand, 13920269 - 13920314
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||||||||| || ||||| || ||||||||||||||||    
T  13920269 ggcacactgaactgtgctaggatgttagaacatcgtatccaacatc 13920314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 563 - 615
Target Start/End: Complemental strand, 18035207 - 18035154
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttg 615  Q
    |||||||||||||||||||||||||| ||||| | || ||||||| ||||||||    
T  18035207 ttgaaattctagcgcacttgttttaatatgttttgtacgatgtttaaacgtttg 18035154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 564 - 643
Target Start/End: Complemental strand, 23954869 - 23954788
Alignment:
Q  564 tgaaattctagcgcacttgttttaaat-gttctat-atgatgttttaacgtttgcaatgttacgattaatgttccaacatca 643  Q
    |||||||||||| |||||||||||| | | ||||| ||||||||   || ||||||| ||||||||||||||| ||||||||    
T  23954869 tgaaattctagcacacttgttttaattagctctattatgatgttacgacatttgcaaagttacgattaatgtttcaacatca 23954788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 123; Significance: 1e-62; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 25121 - 24931
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||||| |||||  |||||  ||||||  ||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||      
T  25121 attgtttccttaaataataaagggcgcatgtacaaacaggcgagaacttaggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttcc 25022  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  25021 agagacgcctaaacacatgttgaaactttggttccaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 24931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Complemental strand, 25984 - 25896
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||| ||||||||||| | ||||| |||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||    
T  25984 tgaaattctagcgtacttgttttaatacgttctgtatgatgtttcagcgtttgcaatgctacgattaatgtttcaacatcacgcgataa 25896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 3e-60; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 3e-60
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 22485849 - 22486039
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||      
T  22485849 attgtttccttaaacaataaagggcgcgcgtacaaacagacgagaactcaggcacactgaactgtgccaggatgttggagcatcgtatccaactttttcc 22485948  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  22485949 agagacacctaaacacatgttgaaactttggttccaacttacagaacaaggatatttattttagcaacaatacagccaatacaaataccca 22486039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 696 - 885
Target Start/End: Complemental strand, 23540850 - 23540661
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||||||||||||||   ||| |||||||||| ||||||||||| |||||||| ||||||||||| |||||||     
T  23540850 attgtttccttaaacaataaagggcgcgcgtacaagtaggcataaacccaggcacactaaactgtgccaggatgttggaacatcgtatccatcatcttac 23540751  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccc 885  Q
    | ||| |||||||||||||||||||| | |||||||||||||| | |||||||||||||||| |||| |||||||||||| |||||||||    
T  23540750 agagatgcctaaacacatgttggaacattggttccaacttacacatcaaggatatttgttttcgcaataatgcagccaatacaaataccc 23540661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 696 - 883
Target Start/End: Complemental strand, 27924896 - 27924708
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   ||| ||||||||||||||  |||| |||||||||||||  ||| ||| |||||||| |||| ||||||||||||||     
T  27924896 attgtttccttaaacaataaagagcgtgcgtacaagtaggcatgaacccaggcacactgaatcgtgtcaggatgttggaacatcttatccaacatcttac 27924797  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    | | | |||||||||||||||||||| | |||||||||||||| || ||||||||||||||| ||||| |||||||||| | |||||||    
T  27924796 agaaatgcctaaacacatgttggaacattggttccaacttacacaatcaaggatatttgtttcagcaataatgcagccactacaaatac 27924708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 696 - 883
Target Start/End: Original strand, 33962449 - 33962633
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||||||||  || |  || |||||||||||||||||||||||| |||||||| |||  ||||||||||||||     
T  33962449 attgtttccttaaacaataaagggcgcgcgtacaaagagacatgacctcaggcacactgaactgtgccaggatgttggaacataatatccaacatcttac 33962548  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    | ||| ||||||| |||||||||||| | |||||||||  ||| |  ||  |||||| ||||||||| |||||||||||| |||||||    
T  33962549 agagatgcctaaatacatgttggaacattggttccaac-aacaca--aataatatttattttagcaataatgcagccaatacaaatac 33962633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 696 - 852
Target Start/End: Original strand, 45136827 - 45136982
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||||| ||||||||||| |||||||| ||||||| ||| ||| ||| |||||||| |||| |||||||||||| |     
T  45136827 attgtttccttaaacaataaagggcgcgc-tacaagtaggcaagaactcaagcacactaaaccgtgtcaggatgttggaacatcatatccaacatctaac 45136925  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatattt 852  Q
    | |||  ||||||||||||||||||| | | ||||||||| || |||||||||||||    
T  45136926 agagatacctaaacacatgttggaacattgattccaacttgcacaacaaggatattt 45136982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 696 - 883
Target Start/End: Original strand, 33977775 - 33977959
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| ||||||| |||||  |||| ||| |||||||||||||| ||| |||||||| |||  ||||||||||||||     
T  33977775 attgtttccttaaacaataaagggcgcacgtacaaataggcatgaacccagacacactgaactgtgtcaggatgttggaacataatatccaacatcttac 33977874  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    | ||| ||||||| |||||||||||| | |||||||||  ||| |  ||  |||||| ||||||||| |||||||||||| |||||||    
T  33977875 agagatgcctaaatacatgttggaacattggttccaac-aacaca--aataatatttattttagcaataatgcagccaatacaaatac 33977959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 799 - 886
Target Start/End: Original strand, 22476893 - 22476980
Alignment:
Q  799 gacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||||||||||||||||| ||||| || ||||||||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||    
T  22476893 gacgcctaaacacatgttgaaactttggctccaacttacagaacaaagatatttgttttagcaacaatgcaaccaatacaaataccca 22476980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 563 - 655
Target Start/End: Complemental strand, 23541723 - 23541629
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgtt-acgattaatgttccaacatcacgcgataagcag 655  Q
    ||||||||||| ||||||| |||||| ||||| | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  23541723 ttgaaattctaccgcacttattttaatatgttatgtatgatgttttaacgtttgcaatgtttacgatcaatgttccaacatcacgcgataagcag 23541629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 22472629 - 22472719
Alignment:
Q  562 tttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||  |||||||||||| | ||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||    
T  22472629 tttgaaattctaggacacttgttttaatacgttctgtatgatgttttaacgtttgcgatgttacgattaatgtttcaacatcacacgataa 22472719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 22481024 - 22480935
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||  |||||||||||| ||||| | |||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22481024 ttgaaattctagaacacttgttttaatatgttttgtatgatattttaacgtttgcgatgttacgattaatgtttcaacatcacgcgataa 22480935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 26537003 - 26537193
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||| ||||  ||||| ||||||| |||||  ||||  || |||||||||| ||||||  |||||||| |||| ||||||||||||||     
T  26537003 attgtttccttaaaccataagtggcgcacgtacaaataggcatgaacctagacacactgaaccgtgccatgatgttggaacatcatatccaacatcttac 26537102  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
      | | ||||||||||||||| |||  | ||||| |||  ||| |||||||||||||||||||| ||| |||||| | ||| ||||||||||    
T  26537103 ggatatgcctaaacacatgttagaagattggttctaac-aacacaaacaaggatatttgttttaacaataatgcaactaatacaaataccca 26537193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 745 - 886
Target Start/End: Original strand, 18622426 - 18622563
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    ||||||||||||| ||||||  |||||||| ||||||||||||||||||| | ||| | || || |||||||||||| | |  ||||||  || ||||||    
T  18622426 aggcacactgaaccgtgccaagatgttggaacatcgtatccaacatcttacagagatgtctgaa-acatgttggaacatagtatccaac--ac-aaacaa 18622521  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||| |||||| ||||| ||||||||||    
T  18622522 gaatatttgttttagcaataatgcaaccaatacaaataccca 18622563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 45133513 - 45133601
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||| ||||||||||||| ||||||| || ||||||||||| |||||||||||  | | ||||||| ||||||| |||||||    
T  45133513 tgaaattctagtgcacttgttttaatatgttctctacgatgttttaacatttgcaatgttctgttcaatgttctaacatcatgcgataa 45133601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 720 - 875
Target Start/End: Original strand, 9997237 - 9997390
Alignment:
Q  720 cgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttgga 819  Q
    ||||||||||| |||||  ||| ||||||||||||||| |||||| |||| | || ||||||||||||||||||| | | | ||||||| |||||||| |    
T  9997237 cgcgcgtacaaataggcatgaaatcaggcacactgaaccgtgccaaaatg-tagaacatcgtatccaacatcttacagaaatgcctaaa-acatgttgaa 9997334  T
Q  820 acttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaat 875  Q
    |  | |  |||||| |   ||||| || |||||||||||||||||||| |||||||    
T  9997335 aacttgtatccaacatcacaaacatgggtatttgttttagcaacaatgaagccaat 9997390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 645
Target Start/End: Original strand, 24091821 - 24091903
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacg 645  Q
    ||||||||||||||||||||||||| ||||||| || ||||||| |||||||  ||||||  | | |||||||||||||||||    
T  24091821 tgaaattctagcgcacttgttttaatatgttctgtaagatgtttcaacgtttataatgttctgttcaatgttccaacatcacg 24091903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 564 - 643
Target Start/End: Complemental strand, 11221577 - 11221497
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatca 643  Q
    |||||||||||||||||||||||||  |||| | || ||||||| ||||||| ||||||| || | |||||||||||||||    
T  11221577 tgaaattctagcgcacttgttttaatttgttttgtacgatgtttaaacgttttcaatgttccgttcaatgttccaacatca 11221497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 564 - 645
Target Start/End: Complemental strand, 27925733 - 27925651
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacg 645  Q
    ||||||||||||||| ||||||||| ||||| | |  ||||||||||||| ||||||||| || | |||||| ||||||||||    
T  27925733 tgaaattctagcgcatttgttttaatatgttatgtcagatgttttaacgtatgcaatgtttcgttcaatgtttcaacatcacg 27925651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 746 - 790
Target Start/End: Original strand, 1684721 - 1684765
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacat 790  Q
    ||||||||||||||||| || |||||||||||||||||| |||||    
T  1684721 ggcacactgaactgtgctaggatgttggagcatcgtatcaaacat 1684765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 847 - 886
Target Start/End: Original strand, 9997590 - 9997629
Alignment:
Q  847 atatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  9997590 atatttgttttagcaataatgcagccaatacaaataccca 9997629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 717 - 774
Target Start/End: Original strand, 25241095 - 25241152
Alignment:
Q  717 aggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttgga 774  Q
    ||||||||||| || |||||  ||| ||||||||||||||| || |||||||||||||    
T  25241095 aggcgcgcgtataaataggcatgaattcaggcacactgaaccgtaccagaatgttgga 25241152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 115; Significance: 7e-58; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 1444 - 1254
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||||||||||  |||||||||||||||||||||||||  ||| || ||||||||||||| |||||||||||||      
T  1444 attgtttccttaaacaataaagggtgcgcgtacaaacaggcgagaactcaggcacactgaaccatgctaggatgttggagcatcatatccaacatcttcc 1345  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| || ||||| ||||||||||    
T  1344 agagacgcctaaacacatgttgaaactttggttccaacttacaaaacaaggatatttattttagcaacaatacaaccaatacaaataccca 1254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 7e-58; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 700 - 886
Target Start/End: Original strand, 12911212 - 12911398
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaag 799  Q
    ||||||||||||||||  |||||||||||||  | |||||||||||| |||||||||| ||| |||||||||| ||||||||||||||||||||  | ||    
T  12911212 tttccttaaacaataaagggcgcgcgtacaaacaagcgagaactcagacacactgaaccgtgtcagaatgttgaagcatcgtatccaacatcttccagag 12911311  T
Q  800 acgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||| ||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||    
T  12911312 acgcctaaacacatgttgaaactttggttccaacttacaggacaatgatatttgttttagcaacaatgcagccaatacaaataccca 12911398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 700 - 886
Target Start/End: Complemental strand, 24789598 - 24789412
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaag 799  Q
    ||||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  | ||    
T  24789598 tttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaacatcttccagag 24789499  T
Q  800 acgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||| || || |||||||| ||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  24789498 atgcctaaacacatgttgaaattttggttccaaattacagaacaaggatatttattttagcaacaatacagccaatacaaataccca 24789412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 23759340 - 23759530
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||||||||||||  ||  ||||||||||||||| ||||| ||| ||| |||||| ||||||  ||||||||||||      
T  23759340 attgtttccttaaacaataaagggcgcgcgtacaaacagttgagaactcaggcacattgaaccgtgacaggatgttgaagcatcacatccaacatcttcc 23759439  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||||||||||| |||||||| ||||| ||||| || ||||| |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  23759440 aaagacgcctaaatacatgttgaaactttggttctaagttacagaacaagaatatttgttttagcaacaatgcagccaatacaaataccca 23759530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 769 - 886
Target Start/End: Original strand, 22614329 - 22614446
Alignment:
Q  769 gttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgc 868  Q
    |||||||||| ||||||||||||||  | |||| ||||||| ||||||| ||||| |||| ||||||||| ||||||||||||| |||||||||||||||    
T  22614329 gttggagcatggtatccaacatcttccagagacacctaaacgcatgttgaaactttggtttcaacttacagaacaaggatatttattttagcaacaatgc 22614428  T
Q  869 agccaatccaaataccca 886  Q
    ||||||| ||||||||||    
T  22614429 agccaatacaaataccca 22614446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 12910338 - 12910426
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||| ||||||||||||||||| | ||||| |||||||||| | ||||||||||||||||||||| ||| ||||||||||||||||    
T  12910338 tgaaattttagcgcacttgttttaatacgttctgtatgatgtttcagcgtttgcaatgttacgattaaagtttcaacatcacgcgataa 12910426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 746 - 886
Target Start/End: Original strand, 15329086 - 15329225
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaa 844  Q
    ||||||| |||| ||||||| |||||||| ||||||||||||||||||| | | | |||| ||  ||||||||||| | |||||||||  ||| |||||     
T  15329086 ggcacacagaaccgtgccaggatgttggaacatcgtatccaacatcttacagacatgcctgaa-tcatgttggaacattggttccaac-aacacaaacat 15329183  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||||||||||||||||||||| ||||||| ||||||||||    
T  15329184 gaatatttgttttagcaacaatgtagccaatacaaataccca 15329225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 23758474 - 23758562
Alignment:
Q  564 tgaaattctagcgcacttgttttaaat-gttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| | ||| | |||||||||| |  |||||||||||||||||||||||| ||||||||||||||||    
T  23758474 tgaaattctagcacacttgttttaattagttttgtatgatgtttcagtgtttgcaatgttacgattaatgtttcaacatcacgcgataa 23758562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 696 - 773
Target Start/End: Original strand, 22611607 - 22611684
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttgg 773  Q
    ||||||||||||||||||||  |||||||||||||  |||||||||||||| |||||||||| ||| ||| |||||||    
T  22611607 attgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcagtcacactgaaccgtgtcaggatgttgg 22611684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 22610741 - 22610829
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||| |||||| ||||||| |||||||||     ||||||||| |||||||||||||| ||||||||||||||||    
T  22610741 tgaaattctagcgcacttattttaatatgttctgtatgatgttacggagtttgcaatattacgattaatgtttcaacatcacgcgataa 22610829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 643
Target Start/End: Complemental strand, 36399110 - 36399025
Alignment:
Q  561 ttttgaaattctagcgcacttgttttaaatgttcta--tatgatg-ttttaacgtttgcaatgttacgattaatgttccaacatca 643  Q
    |||||||||||| ||| |||||||||||||||| ||  ||||||| ||||||| ||||| ||||| ||||||||||| ||||||||    
T  36399110 ttttgaaattctggcgtacttgttttaaatgttatatgtatgatgtttttaacatttgcgatgtttcgattaatgtttcaacatca 36399025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 699 - 883
Target Start/End: Original strand, 21531097 - 21531280
Alignment:
Q  699 gtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaa 798  Q
    ||||||||||| ||||| ||||||||||||||  ||||  |||   |||||||| ||||  | |||| |||||||| ||| ||||||||||||||| | |    
T  21531097 gtttccttaaataataaaaggcgcgcgtacaaacaggcatgaaacaaggcacaccgaaccataccaggatgttggaacattgtatccaacatcttacaga 21531196  T
Q  799 gacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    || |||| || |||||||||||| | |  | ||||  ||| ||||| | |||||||||||||||| |||||| ||||| |||||||    
T  21531197 gatgcctgaa-acatgttggaacatagtattcaac-aacacaaacatgaatatttgttttagcaataatgcaaccaatacaaatac 21531280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 561 - 650
Target Start/End: Complemental strand, 24790472 - 24790382
Alignment:
Q  561 ttttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgata 650  Q
    ||||||||||||||| ||||| |||||| ||||| | || ||||||     ||||| |||||||||||||||||| |||||||||||||||    
T  24790472 ttttgaaattctagcccacttattttaatatgttttgtacgatgttacggagtttgtaatgttacgattaatgtttcaacatcacgcgata 24790382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 794
Target Start/End: Complemental strand, 21249592 - 21249543
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||| ||| ||||||| |||||||| |||||||||||||||||||    
T  21249592 aggcacactaaaccgtgccaggatgttggaacatcgtatccaacatctta 21249543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 746 - 791
Target Start/End: Original strand, 27108209 - 27108254
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||    
T  27108209 ggcacactgaaccgtgccaggatgttggaacatcgtatccaacatc 27108254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 791
Target Start/End: Complemental strand, 24311246 - 24311201
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    |||||||||||| ||||||| |||||||| ||| ||||||||||||    
T  24311246 ggcacactgaaccgtgccaggatgttggaacattgtatccaacatc 24311201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 746 - 791
Target Start/End: Original strand, 27111798 - 27111843
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    |||||| ||||| ||||||| |||||||| ||||||||||||||||    
T  27111798 ggcacattgaaccgtgccaggatgttggaacatcgtatccaacatc 27111843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 111; Significance: 2e-55; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 16221 - 16411
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||||||||||  ||  ||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||      
T  16221 attgtttccttaaacaataaagggtgcgcgtacaaacagaagagaactcaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttcc 16320  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||| | ||||||||||    
T  16321 agagacgcctaaacacatgttcaaactttggttccaacttacagaacaaggatatttgttttagcaacaatgcaaccattacaaataccca 16411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 2e-55; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 645849 - 646038
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||||||||||||||||| || |||||||||||  ||||||||||||||||||||||||| ||||||| |||||| ||||||| ||||||||| || |    
T  645849 attgtttccttaaacaataa-agacgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttgaagcatcgcatccaacattttct 645947  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||| ||||||||||||| ||||| ||||| |||||| | |||||||||||||||||||||||||||||| ||||| ||||||||||    
T  645948 agagacgcttaaacacatgttgaaactttggttctaacttagagaacaaggatatttgttttagcaacaatgcaaccaatacaaataccca 646038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 12326528 - 12326718
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   | ||||||||||||||||  |||| || ||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  12326528 attgtttccttaaacaataaagagtgcgcgtacaagtaggcatgaacccatgcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttat 12326627  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| |  ||||||||||||| | ||||||||||||||||||||| |||||||||||| ||||||||||    
T  12326628 agagatgcctaaacacatgttggaacctttgttccaacttacacaccaaggatatttgttttagcaataatgcagccaatacaaataccca 12326718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 15506946 - 15507136
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   ||||||||||| |||||| ||||| |||||| ||| ||| ||| ||| ||||| || ||||||||||||||||||||    
T  15506946 attgtttccttaaacaataaagagcgcgcgtacaggtaggcaagaacccaggcatacttaaccgtgtcaggatgtttgaacatcgtatccaacatcttat 15507045  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| |||||||||||||||||||| | |||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||    
T  15507046 agagatgcctaaacacatgttggaacattggttccaacttacacatcaaggatatttgttttagcaacaatgcagccaatacaaataccca 15507136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 11520855 - 11520664
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagt-aggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||||||||||  |||||||||||||   ||||||||||||   |||||||||| ||||||| |||||| ||||| ||||||||||||||     
T  11520855 attgtttccttaaacaataaagggcgcgcgtacaaaacaggcgagaactcgaacacactgaaccgtgccaggatgttgaagcattgtatccaacatcttc 11520756  T
Q  795 taaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     | |||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||    
T  11520755 catagacgcctaaacacatgttgaaactttggttccaaattacagaacaaagatatttgttttagcaacaatgcagccaatacaaataccca 11520664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 4459455 - 4459646
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||| ||||||||||  ||||||||||||| |||||  ||||  ||||||||||||  |||| || |||||||| ||| |||||||||||||||     
T  4459455 attgtttccataaacaataaagggcgcgcgtacaaataggcatgaacctaggcacactgaatcgtgctaggatgttggaacattgtatccaacatcttac 4459554  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| ||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||||||||||| |||||||  ||||||||||    
T  4459555 agagatgcctaaacagatgttggaacattggttccaacttacagaaacaaggatatttgttttagcaacaatacagccaacacaaataccca 4459646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 696 - 869
Target Start/End: Complemental strand, 16207324 - 16207151
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||||||||||||||||  |||| ||||||||||||||  |||||| |||||||| |||| ||||||||||||||     
T  16207324 attgtttccttaaacaataaagggtgcgcgtacaagtaggcatgaacccaggcacactgaaccatgccaggatgttggaacatcatatccaacatcttac 16207225  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgca 869  Q
    | ||| |||||||||||||||||||  | |||| ||||||||| ||||| |||||||| |||||||||||||||    
T  16207224 agagatgcctaaacacatgttggaatgttggtttcaacttacacaacaaagatatttggtttagcaacaatgca 16207151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 20992259 - 20992450
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   | |||||||||| |||||  ||||  ||||||||||||| ||||||| |||||||| |||| ||||||||||||||     
T  20992259 attgtttccttaaacaataaagagtgcgcgtacaaataggcatgaacctaggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttac 20992358  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| ||||||||| |||||  |||   |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||    
T  20992359 agagatgcctaaacaaatgttaaaacactggttccaacttacataaacaaggatatttgttttagcaataatgcagccaatacaaataccca 20992450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 15438792 - 15438986
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   | | ||||||| |||||| ||||| |||||||||| ||| ||| ||| |||||  | |||||||||||||||||||     
T  15438792 attgtttccttaaacaataaagagtgtgcgtacaggtaggcaagaacccaggcacacttaaccgtgtcaggatgtttaaacatcgtatccaacatcttac 15438891  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaagg----atatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| ||||||||||||||| |||| | |||||||||||||| | |||||    ||||||||||||||||||||||| ||||| ||||||||||    
T  15438892 agagatgcctaaacacatgtttgaacattggttccaacttacacatcaaggatatatatttgttttagcaacaatgcaaccaatacaaataccca 15438986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 712 - 886
Target Start/End: Original strand, 14165892 - 14166066
Alignment:
Q  712 ataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacac 811  Q
    ||||| ||||||||||||  |||||  |||| |||||||||| | || ||| || |||||||  ||| ||||||||||||||||| ||  |||||| |||    
T  14165892 ataacgggcgcgcgtacatataggcatgaacccaggcacacttagctatgctaggatgttgggacattgtatccaacatcttatagagttgcctaaccac 14165991  T
Q  812 atgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||| || ||||||||||| ||||||||||||| ||||||||| |||| ||||||| ||||||||||    
T  14165992 atgttggaactttggctccaacttacagaacaaggatattttttttagcaataatgtagccaatacaaataccca 14166066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 696 - 882
Target Start/End: Complemental strand, 29545584 - 29545398
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||||||||||| |||||  |||| ||| ||||||||||  ||| || |||||||| ||| |||||||||||||||     
T  29545584 attgtttccttaaacaataaagggcgcgcgtacaaataggcatgaacccagacacactgaaccatgctaggatgttggaacattgtatccaacatcttac 29545485  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaata 882  Q
    | ||| |||||||||||||||||||| |  ||||||||  ||| ||||||| |||||| ||||||||||||| || ||||| ||||||    
T  29545484 agagatgcctaaacacatgttggaacattagttccaac-aacacaaacaagaatatttattttagcaacaatacaaccaatacaaata 29545398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 760 - 886
Target Start/End: Complemental strand, 16221952 - 16221826
Alignment:
Q  760 tgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttag 859  Q
    |||||| |||||||| ||||||||||||||||||| | ||| |||  ||||||||||||||  | |||||||||||||| |  || ||||||| ||||||    
T  16221952 tgccaggatgttggaacatcgtatccaacatcttacagagatgccagaacacatgttggaatgttggttccaacttacataggaaagatatttattttag 16221853  T
Q  860 caacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||| ||||||||||    
T  16221852 caacaatgcagccaatacaaataccca 16221826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 745 - 886
Target Start/End: Complemental strand, 23082170 - 23082030
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    ||||||||||||| ||||||| |||||||| |||| |||||||||||||| | | | ||||||| |||||||||||| | | ||||||| |   || ||     
T  23082170 aggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagaaatgcctaaa-acatgttggaacatagtttccaacatcacaatcat 23082072  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||||| |||||||||||| ||||||||||    
T  23082071 ggatatttgttttagcaataatgcagccaatacaaataccca 23082030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 11521720 - 11521631
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||||||||||| | ||| |||||||||||  | ||||||||||||||||||||||||| |||||||||| |||||    
T  11521720 ttgaaattctagcgcacttgttttaataagttatatatgatgttacagcgtttgcaatgttacgattaatgtttcaacatcacgtgataa 11521631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 11998728 - 11998816
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||||| ||||| | |  ||||||||||||||||||||||| || ||||||||||||||||||| |||||    
T  11998728 tgaaattctagcgcacttgttttaatatgttatgtcagatgttttaacgtttgcaatgttccgtttaatgttccaacatcacgtgataa 11998816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 644980 - 645070
Alignment:
Q  562 tttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||| |||||||||||||||||||||| | ||||| |||||||||| | ||||||||||||||| | ||||||| ||||||||||||||||    
T  644980 tttggaattctagcgcacttgttttaatacgttctgtatgatgtttaatcgtttgcaatgttacaactaatgtttcaacatcacgcgataa 645070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 564 - 642
Target Start/End: Original strand, 4458588 - 4458667
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatc 642  Q
    |||||||| |||||||||||||||| ||||||| |  ||||||||||||||||||||||| || ||||||||||||||||    
T  4458588 tgaaattcgagcgcacttgttttaatatgttctgtcagatgttttaacgtttgcaatgttccgtttaatgttccaacatc 4458667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 566 - 643
Target Start/End: Original strand, 11588315 - 11588393
Alignment:
Q  566 aaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatca 643  Q
    ||||||||||||||||||||||| ||||| | |||||||||   |||||||||||||||||||||||||| ||||||||    
T  11588315 aaattctagcgcacttgttttaatatgttatgtatgatgttacgacgtttgcaatgttacgattaatgtttcaacatca 11588393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 563 - 643
Target Start/End: Original strand, 12325673 - 12325754
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatca 643  Q
    |||||||||||  ||||||||||||| ||||||| |||||||||||||| ||||||||||| || | |||||||||||||||    
T  12325673 ttgaaattctaatgcacttgttttaagatgttctgtatgatgttttaacatttgcaatgttccgttcaatgttccaacatca 12325754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 720 - 820
Target Start/End: Original strand, 10661602 - 10661701
Alignment:
Q  720 cgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttgga 819  Q
    ||||||||||| |||||  ||| ||||||||||||||| |||| || |||||||| ||||||||||||||||||| | | | ||||||| ||||||||||    
T  10661602 cgcgcgtacaaataggcatgaaatcaggcacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacataaatgcctaaa-acatgttgga 10661700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 745 - 886
Target Start/End: Complemental strand, 10038124 - 10037984
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaact-tacaaaaca 843  Q
    |||||||||||||  |||||| |||||||| |||  |||||||||||||| | | | ||||||| |||||||||||| | |  ||||||  |||||| ||    
T  10038124 aggcacactgaaccatgccagtatgttggaacattatatccaacatcttacagaaatgcctaaa-acatgttggaacatagtatccaacaatacaaa-ca 10038027  T
Q  844 aggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     ||||||||||||| |||| |||||||||||| ||||||||||    
T  10038026 tggatatttgttttcgcaataatgcagccaatacaaataccca 10037984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 564 - 645
Target Start/End: Complemental strand, 13455421 - 13455339
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacg 645  Q
    ||||||||||||  | ||||||||| ||||||| |||||||||||||||||| | |||||||| | |||||||||||||||||    
T  13455421 tgaaattctagcaaatttgttttaatatgttctgtatgatgttttaacgttttcgatgttacgttaaatgttccaacatcacg 13455339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 566 - 651
Target Start/End: Complemental strand, 16208189 - 16208103
Alignment:
Q  566 aaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||| |||||||||||| ||||| | |||||||||||||| |||| |||||| || | |||||||||||||||||| ||||    
T  16208189 aaattctagcacacttgttttaatatgttatgtatgatgttttaacatttgtaatgtttcgttcaatgttccaacatcacgcaataa 16208103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 745 - 886
Target Start/End: Original strand, 21261195 - 21261335
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    ||||||||||||| ||||||| |||||||| |||| |||||||||||||| | | | ||||||| |||||||||||| | |  |||||| |   || ||     
T  21261195 aggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagaaatgcctaaa-acatgttggaacatagtatccaacatcacaatcat 21261293  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||| |||||||||  ||||||||||| ||||||||||    
T  21261294 gaatatttattttagcaatgatgcagccaatacaaataccca 21261335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 744 - 867
Target Start/End: Complemental strand, 26132350 - 26132228
Alignment:
Q  744 caggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaaca 843  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||||||||| | ||| |||| || |||||||||||| | |  |||||  |   |||||    
T  26132350 caggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagagatgcctgaa-acatgttggaacatagtatccaatatcacaaaca 26132252  T
Q  844 aggatatttgttttagcaacaatg 867  Q
     |||||||||||||||||| ||||    
T  26132251 tggatatttgttttagcaataatg 26132228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 745 - 869
Target Start/End: Original strand, 14927410 - 14927533
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaaca 843  Q
    ||||||||| ||| ||||||| |||||||| ||||||||||||||||||| | ||| | || || |||||||||||| | |  ||||||  ||| |||||    
T  14927410 aggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagatgtctgaa-acatgttggaacattgtatccaac-aacacaaaca 14927507  T
Q  844 aggatatttgttttagcaacaatgca 869  Q
     |||||||||||||||||| ||||||    
T  14927508 tggatatttgttttagcaataatgca 14927533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 745 - 869
Target Start/End: Original strand, 15350876 - 15350999
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca-aaaca 843  Q
    ||||||||| ||| ||||||| |||||||| ||||||||||||||||||| | ||| | || || |||||||||||| | |  ||||||  ||| |||||    
T  15350876 aggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagatgtctgaa-acatgttggaacattgtatccaac-aacacaaaca 15350973  T
Q  844 aggatatttgttttagcaacaatgca 869  Q
     |||||||||||||||||| ||||||    
T  15350974 tggatatttgttttagcaataatgca 15350999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 745 - 882
Target Start/End: Original strand, 24902871 - 24903006
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaa 844  Q
    ||||||||||||| |||| || |||||||| |||| ||||||||||||  || | | ||||||| |||||||||||| | |  |||||| |   |||||     
T  24902871 aggcacactgaaccgtgc-aggatgttggaacatcatatccaacatctcgtagaaatgcctaaa-acatgttggaacatagtatccaacatcacaaacat 24902968  T
Q  845 ggatatttgttttagcaacaatgcagccaatccaaata 882  Q
    |||||||||||||| ||| |||||||||||| ||||||    
T  24902969 ggatatttgttttaccaataatgcagccaatacaaata 24903006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 843 - 882
Target Start/End: Original strand, 3801868 - 3801907
Alignment:
Q  843 aaggatatttgttttagcaacaatgcagccaatccaaata 882  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  3801868 aaggatatttgttttagcaacaatgcagccaatacaaata 3801907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 10661959 - 10662006
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  10661959 aaacatggatatttgttttagcaataatgcagccaatacaaataccca 10662006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 746 - 791
Target Start/End: Original strand, 9567656 - 9567701
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||    
T  9567656 ggcacactgaactgtgctaggatgttggaacatcgtatccaacatc 9567701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 845 - 886
Target Start/End: Original strand, 10280708 - 10280749
Alignment:
Q  845 ggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  10280708 ggatatttattttagcaacaatgcagccaatacaaataccca 10280749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 745 - 794
Target Start/End: Original strand, 23960790 - 23960839
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||  ||||||| |||||||| |||||||||||||||||||    
T  23960790 aggcacactgaatcgtgccaggatgttggaacatcgtatccaacatctta 23960839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 14165015 - 14165103
Alignment:
Q  564 tgaaattctagcgcacttgttttaaat-gttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||| |||||||||||| | ||||  |||||||||   ||||||| ||||||  |||||||||| |||||||| |||||||    
T  14165015 tgaaattctagcacacttgttttaattagttccgtatgatgttacgacgtttgtaatgttgtgattaatgtttcaacatcatgcgataa 14165103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 841 - 886
Target Start/End: Original strand, 11999536 - 11999582
Alignment:
Q  841 acaaggatatttgtttt-agcaacaatgcagccaatccaaataccca 886  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||    
T  11999536 acaaggatatttgtttttagcaacaatgcagctaatacaaataccca 11999582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 720 - 794
Target Start/End: Original strand, 42636946 - 42637020
Alignment:
Q  720 cgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||| |||||  |||  ||| |||||||||| ||||||| | |||||| |||||||| ||||||||||    
T  42636946 cgcgcgtacaaataggcatgaaagcagacacactgaaccgtgccaggacgttggaacatcgtattcaacatctta 42637020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 745 - 794
Target Start/End: Complemental strand, 20924501 - 20924452
Alignment:
Q  745 aggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||||   |||||| |||||||| |||||||||||||||||||    
T  20924501 aggcacactgaatcttgccaggatgttggaacatcgtatccaacatctta 20924452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 106; Significance: 2e-52; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 697 - 886
Target Start/End: Complemental strand, 109701 - 109512
Alignment:
Q  697 ttgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttata 796  Q
    |||||||||||||||||||  |||||||||||||  |||||||||||||| |||||| ||| || |||| |||||| ||||||| ||| ||||||||  |    
T  109701 ttgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcagacacactaaaccgttccaggatgttgaagcatcgcatctaacatcttcca 109602  T
Q  797 aagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
     |||||||||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||||| |||||||| ||||||||||    
T  109601 gagacgcctaaacacatgttgaaactttggttccaacttacagaacagggatatttgttttagcaacaatacagccaatacaaataccca 109512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 110569 - 110480
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||| || |||||||||||||| | ||| | |||||||||| | || |||||||||||||||||||||| ||||||||| ||||||    
T  110569 ttgaaattttaccgcacttgttttaatacgttatgtatgatgtttcagcgattgcaatgttacgattaatgtttcaacatcactcgataa 110480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 105; Significance: 6e-52; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 696 - 891
Target Start/End: Complemental strand, 47835 - 47639
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtag-gcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||| ||||||||| ||  |||||||||||||  |  ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||     
T  47835 attgttttcttaaacaacaaagggcgcgcgtacaaacaccgcgagaactcaggcacactgaaccgtgccaggatgttggagtatcgtatccaacatcttc 47736  T
Q  795 taaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccaccact 891  Q
     | |||||||||||||||||||| || || ||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  47735 cagagacgcctaaacacatgttgaaattttggttctaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaattcccaacact 47639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 566 - 651
Target Start/End: Complemental strand, 50401 - 50315
Alignment:
Q  566 aaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||| |||||||||||| | ||||| |||||||||    ||||||||||||||||||||||||| ||||||||||||||||    
T  50401 aaattctagcacacttgttttaatacgttctgtatgatgttaaggcgtttgcaatgttacgattaatgtttcaacatcacgcgataa 50315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 562 - 651
Target Start/End: Complemental strand, 61786 - 61696
Alignment:
Q  562 tttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||| || ||||||||| ||||| | |||||||||    |||||||||||||||||||||| || ||||||||||||||||    
T  61786 tttgaaattctagcacatttgttttaatatgttttgtatgatgttacggcgtttgcaatgttacgattaatatttcaacatcacgcgataa 61696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 104; Significance: 2e-51; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 696 - 883
Target Start/End: Original strand, 159787 - 159974
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  || ||| ||||||  ||||||||||||||  |||||| || ||||||| ||||||| ||||| |||||||||||||      
T  159787 attgtttccttaaacaataaagggtgcgtgtacaaacaggcgagaactcagagacactggaccgtgccaggatgttggggcatcatatccaacatcttcc 159886  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatac 883  Q
    | |||||||||||||||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  159887 agagacgcctaaacacatgttgaaactttggtttcaacttacagaacaaggatatttgttttagcaacaatgcagccaatacaaatac 159974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 2606 - 2795
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  |||| ||||||||  || |||||||||||||||||||||| ||||||  |||||| ||||||| || |||||||||      
T  2606 attgtttccttaaacaataaagggcgtgcgtacaaacagtcgagaactcaggcacactgaaccgtgccaagatgttgtagcatcg-atacaacatcttca 2704  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | | |||||| || |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  2705 agatacgcctgaatacatgttgaaactttggtttcaacttacaaaacaaggatatttgttttagcaacaatgcagccaatacaaataccca 2795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 88; Significance: 9e-42; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 696 - 886
Target Start/End: Original strand, 37306 - 37494
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  | ||||| ||||| |||||||||||| ||||||||||||| ||| ||| |||||||| ||| ||||||||||| |||     
T  37306 attgtttccttaaacaataaaggacgcgcctacaaataggcgagaacttaggcacactgaaccgtgtcaggatgttggaacattgtatccaacattttac 37405  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||||||||||||||||||| ||| | || ||||||||||  | ||||||||||| || |||||| |||||||||||| ||||||||||    
T  37406 agagacgcctaaacacatgttgaaacattggctccaacttac--atcaaggatattttttgtagcaataatgcagccaatacaaataccca 37494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 8022 - 7832
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   ||| |||||||| |||||  |||| |||||||||||||| ||||| | ||||| || |||||||| |||||||||||    
T  8022 attgtttccttaaacaataaagagcgggcgtacaaataggcatgaacccaggcacactgaacagtgccgggatgttcgaacatcgtatgcaacatcttat 7923  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | ||| || ||||||||||||||||| | |||||||||  ||| ||| |||||||||||||||||||| |||||||||||| ||||||||||    
T  7922 agagatgcttaaacacatgttggaacattggttccaac-aacacaaataaggatatttgttttagcaataatgcagccaatacaaataccca 7832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 696 - 887
Target Start/End: Complemental strand, 16769 - 16578
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||| ||| |||||||| ||  ||| |||||||||||||||  || ||| ||||| || |||||||||||||||||||     
T  16769 attgtttccttaaacaataaagggcacgcttacaagtatgcatgaaatcaggcacactgaaccatgtcaggatgttagatcatcgtatccaacatcttac 16670  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccac 887  Q
    ||||| |||||||||||||||| ||| | | ||| |||||| | | ||| |||||||||||||||||||||  ||||||| |||||||||||    
T  16669 aaagatgcctaaacacatgttgaaacattgtttctaacttatacatcaatgatatttgttttagcaacaatttagccaatacaaatacccac 16578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 566 - 651
Target Start/End: Complemental strand, 17586 - 17500
Alignment:
Q  566 aaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||||||||||||||||  ||||||| || |||||||||||||||||||||||  | | |||||| ||| ||||||||||||    
T  17586 aaattctagcgcacttgttttagtatgttctgtacgatgttttaacgtttgcaatgttcagttcaatgtttcaaaatcacgcgataa 17500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 80; Significance: 5e-37; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 696 - 887
Target Start/End: Complemental strand, 16064 - 15874
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||   |||| ||||||||||||   |||| ||||||||| |||| ||||||| |||||||| |||||||||||||||||||     
T  16064 attgtttccttaaacaataaagagcgcacgtacaagtaggaatgaacccaggcacaccgaaccgtgccaggatgttggaacatcgtatccaacatcttac 15965  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcagccaatccaaatacccac 887  Q
    | ||| | |||||||| ||||||||  | |||||||||||||| ||||||||||||| |||||  || ||||||| |||| |||||||||||    
T  15964 agagatg-ctaaacacgtgttggaatattggttccaacttacacaacaaggatatttattttaataataatgcagtcaatacaaatacccac 15874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 696 - 870
Target Start/End: Original strand, 88462 - 88634
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    |||||| |||||||||||||   |||||||||||  || ||  |||||||||||||||||||  || ||| |||||||| ||| |||||||||||||||     
T  88462 attgttcccttaaacaataaagagcgcgcgtacatatatgcatgaactcaggcacactgaaccatgtcaggatgttggaacattgtatccaacatcttac 88561  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttacaaaacaaggatatttgttttagcaacaatgcag 870  Q
    |  || |||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||    
T  88562 a--gatgcctaaccacatgttggaactttggttccaacttacagaacaaggatatttgttttagcaataatgcag 88634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 567 - 651
Target Start/End: Original strand, 87588 - 87672
Alignment:
Q  567 aattctagcgcacttgttttaaatgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||| |||||||||||||||||||| |  ||||| |||| || | ||||||| |  ||||||||||||||||||| |||||    
T  87588 aattctagtgcacttgttttaaatgttctgtcagatgtattaatgtctacaatgttccatttaatgttccaacatcacgtgataa 87672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 76; Significance: 1e-34; HSPs: 6)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 17568 - 17378
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| | ||||| || ||  ||||||||||||||||||| |||  || |||||||| |||| |||| |||||||||     
T  17568 attgtttccttaaacaataaagggcgcacatacaaatatgcatgaactcaggcacactgaaccgtggtaggatgttggaacatcatatctaacatcttac 17469  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||  ||||||||||||||||||| | |||||||||  ||| |||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  17468 agagatacctaaacacatgttggaacattggttccaac-aacacaaacaaggatatttgttttagcaataatgcagtcaatacaaataccca 17378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 696 - 886
Target Start/End: Complemental strand, 26962 - 26772
Alignment:
Q  696 attgtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttat 795  Q
    ||||||||||||||||||||  ||||| | ||||| || ||  ||||||||||||||||||| |||  || |||||||| |||| |||| |||||||||     
T  26962 attgtttccttaaacaataaagggcgcacatacaaatatgcatgaactcaggcacactgaaccgtggtaggatgttggaacatcatatctaacatcttac 26863  T
Q  796 aaagacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    | |||  ||||||||||||||||||| | |||||||||  ||| |||||||||||||||||||||||| ||||||| |||| ||||||||||    
T  26862 agagatacctaaacacatgttggaacattggttccaac-aacacaaacaaggatatttgttttagcaataatgcagtcaatacaaataccca 26772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 700 - 886
Target Start/End: Complemental strand, 6977 - 6792
Alignment:
Q  700 tttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgcca-gaatgttggagcatcgtatccaacatcttataaa 798  Q
    |||||||||||||||| ||| |||||||||| |||||  |||| ||| |||||||||| |||||| | |||||||| |||| ||||||| |||||| |||    
T  6977 tttccttaaacaataa-agg-gcgcgtacaaataggcatgaacccagacacactgaaccgtgccaaggatgttggaacatcatatccaaaatcttacaaa 6880  T
Q  799 gacgcctaaacacatgttggaacttcggttccaacttaca-aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    || | |||||||||||||||||| | |||||||||  ||| ||||||||||||||| |||||||| |||| ||||||| ||||||||||    
T  6879 gatggctaaacacatgttggaacattggttccaac-aacacaaacaaggatatttgctttagcaataatgtagccaatacaaataccca 6792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #4
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 564 - 645
Target Start/End: Complemental strand, 18435 - 18353
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacg 645  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||  || | || ||||||||||||||    
T  18435 tgaaattctagcgcacttgttttaatatgttctgtaagatgttttaacgtttgcaatgtcccgttcaacgttccaacatcacg 18353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 564 - 645
Target Start/End: Complemental strand, 27829 - 27747
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacg 645  Q
    ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||  || | || ||||||||||||||    
T  27829 tgaaattctagcgcacttgttttaatatgttctgtaagatgttttaacgtttgcaatgtcccgttcaacgttccaacatcacg 27747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 565 - 651
Target Start/End: Complemental strand, 7849 - 7762
Alignment:
Q  565 gaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||||||||||||||| ||||||| || |||| ||||||||||||||||| | | | |||||||||| |||||| |||||    
T  7849 gaaattctagcgcacttgttttaatatgttctgtaagatgatttaacgtttgcaatgtcatgttcaatgttccaatatcacgagataa 7762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 76; Significance: 1e-34; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 739 - 870
Target Start/End: Original strand, 9433 - 9564
Alignment:
Q  739 gaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatcttataaagacgcctaaacacatgttggaacttcggttccaacttaca 838  Q
    ||||||||||||||||||| ||||||  | |||||| ||| |||||||||| |||| | ||| ||||||||| |||||||||||| |||| |||||||||    
T  9433 gaactcaggcacactgaaccgtgccaagaagttggaacattgtatccaacaccttacagagatgcctaaacatatgttggaactttggtttcaacttaca 9532  T
Q  839 aaacaaggatatttgttttagcaacaatgcag 870  Q
    |||||||||||||||||||||||| |||||||    
T  9533 aaacaaggatatttgttttagcaataatgcag 9564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 564 - 651
Target Start/End: Original strand, 36854 - 36942
Alignment:
Q  564 tgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    |||||||||||  |||||||||||| |||||||||||||||||   |||||||||||||||||||||||||| ||| |||| |||||||    
T  36854 tgaaattctaggacacttgttttaatatgttctatatgatgttacgacgtttgcaatgttacgattaatgtttcaaaatcatgcgataa 36942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 562 - 651
Target Start/End: Original strand, 5491 - 5581
Alignment:
Q  562 tttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||| ||||||||||||||||| ||||||| |||||| ||    ||||||||||||||| ||||||||| ||||||||||||||||    
T  5491 tttgaaattttagcgcacttgttttaatatgttctgtatgatattacggcgtttgcaatgttacaattaatgtttcaacatcacgcgataa 5581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 46; Significance: 1e-16; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 563 - 651
Target Start/End: Complemental strand, 16525 - 16437
Alignment:
Q  563 ttgaaattctagcgcacttgttttaa-atgttctatatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataa 651  Q
    ||||||||| || ||||||||||||| | ||| | |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||    
T  16525 ttgaaattcaagggcacttgttttaatacgttatgtatgatgttttaacgtttgcgatgttacgtttaat-ttccaacatcacgcgataa 16437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 699 - 794
Target Start/End: Original strand, 682 - 776
Alignment:
Q  699 gtttccttaaacaataacaggcgcgcgtacaagtaggcgagaactcaggcacactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||||||||| ||||  |||||||||||   ||||||  |||| |||||||||||||| ||||||  |||||||| |||||||||||||||||||    
T  682 gtttccttaaataatacaaggcgcgcgtaagtgtaggcatgaac-caggcacactgaaccgtgccaagatgttggaacatcgtatccaacatctta 776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 839 - 886
Target Start/End: Original strand, 36599 - 36646
Alignment:
Q  839 aaacaaggatatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||    
T  36599 aaacatggatatttgttttagcaataatgcagccaatacaaataccca 36646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 749 - 794
Target Start/End: Original strand, 38074 - 38119
Alignment:
Q  749 acactgaactgtgccagaatgttggagcatcgtatccaacatctta 794  Q
    ||||| ||||||||||| |||||||| |||||||||||||||||||    
T  38074 acacttaactgtgccaggatgttggaacatcgtatccaacatctta 38119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 847 - 886
Target Start/End: Original strand, 38171 - 38210
Alignment:
Q  847 atatttgttttagcaacaatgcagccaatccaaataccca 886  Q
    |||||||||||||||| |||||||||||| ||||||||||    
T  38171 atatttgttttagcaataatgcagccaatacaaataccca 38210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 746 - 791
Target Start/End: Complemental strand, 50303 - 50258
Alignment:
Q  746 ggcacactgaactgtgccagaatgttggagcatcgtatccaacatc 791  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||    
T  50303 ggcacactgaactgtgctaggatgttggaacatcgtatccaacatc 50258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University