View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8089_high_7 (Length: 240)
Name: NF8089_high_7
Description: NF8089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8089_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 22 - 231
Target Start/End: Complemental strand, 3688646 - 3688437
Alignment:
| Q |
22 |
accgcaatgtttcatattgttgcggcggttgaacaacctgaaacggtgtcatccaagaaacaacaccgtcaacaatctccgtcttctcccttttaaacac |
121 |
Q |
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| T |
3688646 |
accgcaaagtttcatattgttgcggccgttgaacaacctgtaacggtgtcatccacgaaacaacaccgtcaacaatatccgtcttctcccttttaaacac |
3688547 |
T |
|
| Q |
122 |
ctgctcacattccggcttcaggtctccggtctcgagacatgtctctcttttctgcactctttttctcttcacctccattctcctcaatgcttgaatctca |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3688546 |
ctgctcacattccggcttcaggtctccggtctcgagacatgtctctcttttctgcactctttttctcttcacctccattctcctcaatgcttgaatctca |
3688447 |
T |
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| Q |
222 |
cgtttcattt |
231 |
Q |
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|||||||||| |
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| T |
3688446 |
cgtttcattt |
3688437 |
T |
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