View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8089_low_10 (Length: 343)
Name: NF8089_low_10
Description: NF8089
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8089_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 2 - 314
Target Start/End: Original strand, 13715813 - 13716125
Alignment:
| Q |
2 |
gcaacgtttttgcctcactttctaccatattacatcatatcaagtaatgattacaatcactactgtaagtaagcacccgtaaacacagttatagcctaaa |
101 |
Q |
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| T |
13715813 |
gcaacgtttttgcctcactttctaccatattacatcatatcaagtaatgattaaaatcactaatgtaagtaagcacccgtaaacagagttatagcctaaa |
13715912 |
T |
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| Q |
102 |
accactttgttgtcggggtgtataatctttccatgtcctccatcacctttagttctggacttagtcggctgatatcttactcatacagctgagttgaggg |
201 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13715913 |
accactttgttgtcggggtgtataatctttccatgtcttccatcacctttagttctggacttagtcggctgatatcttactcatacagctgagttgaggg |
13716012 |
T |
|
| Q |
202 |
caaacttgtacttgtacgactgagtgcttggctagcatttactcatgttgtccacattcctatttttgagcaagtggatgttcaaccannnnnnnccatt |
301 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
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| T |
13716013 |
caaacttgtacttgtacgactgagtgcttggctagcatttactcatgttgtccacattcctatttttgagcaagtggatgttcgaccatttttttccatt |
13716112 |
T |
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| Q |
302 |
caaattgatcttg |
314 |
Q |
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||||||||||||| |
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| T |
13716113 |
caaattgatcttg |
13716125 |
T |
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