View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8091_high_12 (Length: 457)

Name: NF8091_high_12
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8091_high_12
NF8091_high_12
[»] chr7 (8 HSPs)
chr7 (1-441)||(33885719-33886159)
chr7 (34-120)||(33894505-33894591)
chr7 (34-83)||(5276143-5276192)
chr7 (36-81)||(45078214-45078259)
chr7 (34-69)||(25670687-25670722)
chr7 (34-83)||(29574703-29574752)
chr7 (34-78)||(5373149-5373193)
chr7 (34-120)||(30133932-30134017)
[»] chr2 (4 HSPs)
chr2 (34-80)||(18962140-18962186)
chr2 (37-69)||(3235487-3235519)
chr2 (37-120)||(10190161-10190244)
chr2 (35-83)||(29430675-29430723)
[»] chr6 (6 HSPs)
chr6 (34-85)||(4247736-4247787)
chr6 (34-121)||(33416266-33416353)
chr6 (34-69)||(33259749-33259784)
chr6 (36-78)||(29249398-29249440)
chr6 (34-78)||(2514626-2514670)
chr6 (41-77)||(2732338-2732374)
[»] chr4 (6 HSPs)
chr4 (34-83)||(4191658-4191707)
chr4 (37-80)||(21157690-21157733)
chr4 (38-118)||(43932316-43932397)
chr4 (34-79)||(51555969-51556014)
chr4 (36-80)||(2980575-2980619)
chr4 (38-78)||(15511441-15511481)
[»] chr3 (4 HSPs)
chr3 (34-69)||(52413223-52413258)
chr3 (38-79)||(16790462-16790503)
chr3 (35-83)||(24268258-24268306)
chr3 (34-78)||(41028953-41028997)
[»] chr5 (5 HSPs)
chr5 (34-76)||(7096229-7096271)
chr5 (34-119)||(26516180-26516266)
chr5 (34-78)||(10391277-10391321)
chr5 (34-78)||(13224353-13224397)
chr5 (37-69)||(31030233-31030265)
[»] chr1 (3 HSPs)
chr1 (35-77)||(24146362-24146404)
chr1 (34-80)||(38651511-38651557)
chr1 (34-83)||(870964-871013)
[»] chr8 (1 HSPs)
chr8 (37-77)||(5290566-5290606)


Alignment Details
Target: chr7 (Bit Score: 421; Significance: 0; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 33885719 - 33886159
Alignment:
Q  1 ttaattgagttgtttatccaaacatagcctatgtcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcgttaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33885719 ttaattgagttgtttatccaaacatggcctatgtcttttattataaaaattgctgatacataagcacttgcatgataaacggtcatatcataagcgttaa 33885818  T
Q  101 ttgagctgtttatccaaacaaccttgtttgattcttttcttttttgtgtgactctttaatgcattcttaagtgtagctgattttgaatattgtggacaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33885819 ttgagctgtttatccaaacaaccttgtttgattcttttcttttttgtgtgactctttaatgcattcttaagtgtagctgattttgaatattgtggacaat 33885918  T
Q  201 ttctattttacagccactggtgaaaactgcaagggagacccttatgagaatgttatattcttgcatggatttatgtgttcttcctcattttggactcaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33885919 ttctattttacagccactggtgaaaactgcaagggagacccttatgagaatgttatattcttgcatggatttatgtgttcttcctcattttggactcaaa 33886018  T
Q  301 cagcgtttccatgtttctctgaaaatgtaaatcataattacagattgattgcaatagacctgttgggatttggaaagagtccaaagccaagagattgttt 400  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33886019 cagtgtttccatgtttctctgaaaatgtaaatcataattacagattgattgcaatagacctgttgggatttggaaagagtccaaagccaagagattgttt 33886118  T
Q  401 gtacacattgaaggatcatgtggaaatgattgagaaatctg 441  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33886119 gtacacattgaaggatcatgtggaaatgattgagaaatctg 33886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 33894591 - 33894505
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcgttaattgagctgtttatccaaaca 120  Q
    |||||||||||| |||||||| |||||||||||||| |||||| |||  |||| ||||||||  | ||| |  ||||||||||||||    
T  33894591 tcttttgttatagaaatagcttatacataagcacttacatgatgaacattcatgtcataagcacttattaaattgtttatccaaaca 33894505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 5276192 - 5276143
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    ||||||||||||||||||||| ||||||||||||||  | ||||||||||    
T  5276192 tcttttgttataaaaatagcttatacataagcacttaaacgataaacgct 5276143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 45078259 - 45078214
Alignment:
Q  36 ttttgttataaaaatagctgatacataagcacttgcatgataaacg 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  45078259 ttttgttataaaaatagcttatacataagcacttatatgataaacg 45078214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 25670687 - 25670722
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcactt 69  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25670687 tcttttgttataaaaatagcttatacataagcactt 25670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 29574703 - 29574752
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    |||||||| |||||||||||| ||||||||||| ||  ||||||||||||    
T  29574703 tcttttgtcataaaaatagcttatacataagcatttatatgataaacgct 29574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 5373193 - 5373149
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||| |||||||  |||||||||||||| ||||||||    
T  5373193 tcttttgttatagaaatagcatatacataagcacttacatgataa 5373149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 30134017 - 30133932
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagc-gttaattgagctgtttatccaaaca 120  Q
    ||||||||| ||||||||||| |||||||| |||||  ||||||| |||| ||   ||||||  ||||||||| ||||||||||||||    
T  30134017 tcttttgttgtaaaaatagcttatacataaacactt--atgataagcgcttatgctataagcatttaattgagttgtttatccaaaca 30133932  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 18962140 - 18962186
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18962140 tcttttgttataaaaatagctaatacataagcacttacatgataaac 18962186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 3235487 - 3235519
Alignment:
Q  37 tttgttataaaaatagctgatacataagcactt 69  Q
    |||||||||||||||||| ||||||||||||||    
T  3235487 tttgttataaaaatagctaatacataagcactt 3235519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 10190244 - 10190161
Alignment:
Q  37 tttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcg-ttaattgagctgtttatccaaaca 120  Q
    |||||||||||||||| | ||||||||||||||  ||||||| | ||| ||  ||||| | ||||||||||| ||||||||||||    
T  10190244 tttgttataaaaatagtttatacataagcacttatatgataaccactcctactataagtgcttaattgagct-tttatccaaaca 10190161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 29430723 - 29430675
Alignment:
Q  35 cttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    ||||||||||| |||||||| |||||||| | |||| ||||||||||||    
T  29430723 cttttgttatagaaatagcttatacataaacccttgtatgataaacgct 29430675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 4247736 - 4247787
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctca 85  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||| ||||    
T  4247736 tcttttgttatagaaatagcttatacataagcacttacatgataaacactca 4247787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 33416353 - 33416266
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcgttaattgagctgtttatccaaacaa 121  Q
    ||||||||||||||||||||| ||||||||||||||  || || | |||| || | |||||| ||||||  | |||||||||||||||    
T  33416353 tcttttgttataaaaatagcttatacataagcactttgataatgagcgcttatcttataagctttaattaggttgtttatccaaacaa 33416266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 33259784 - 33259749
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcactt 69  Q
    ||||||||||||||||||||| ||||||||||||||    
T  33259784 tcttttgttataaaaatagcttatacataagcactt 33259749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 29249440 - 29249398
Alignment:
Q  36 ttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  29249440 ttttgttatagaaatagctgatacataagcacttatatgataa 29249398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 2514670 - 2514626
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||    
T  2514670 tcttttattatagaaatagcttatacataagcacttacatgataa 2514626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 2732338 - 2732374
Alignment:
Q  41 ttataaaaatagctgatacataagcacttgcatgata 77  Q
    |||||||||||||| |||||||| |||||||||||||    
T  2732338 ttataaaaatagcttatacataaacacttgcatgata 2732374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 4191707 - 4191658
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    |||||||||||| |||||||| ||||||||||||||  ||||||||||||    
T  4191707 tcttttgttatagaaatagcttatacataagcacttatatgataaacgct 4191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 21157733 - 21157690
Alignment:
Q  37 tttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    |||||||| ||||||||||||||||||||||||  |||||||||    
T  21157733 tttgttatcaaaatagctgatacataagcacttatatgataaac 21157690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 43932397 - 43932316
Alignment:
Q  38 ttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcg-ttaattgagctgtttatccaaa 118  Q
    ||||| ||||||||| | ||||||||||||||| ||||||||| || || | ||||| | |||||| | |||||||||||||    
T  43932397 ttgttgtaaaaatagtttatacataagcacttgtatgataaacacttatgttataagtgcttaattaatctgtttatccaaa 43932316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 51555969 - 51556014
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaa 79  Q
    ||||||||||||| ||||||| ||||||||||||||  ||||||||    
T  51555969 tcttttgttataataatagcttatacataagcacttatatgataaa 51556014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 2980575 - 2980619
Alignment:
Q  36 ttttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    |||||||||| |||||||| ||||||||||||||  |||||||||    
T  2980575 ttttgttatagaaatagcttatacataagcacttatatgataaac 2980619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 15511441 - 15511481
Alignment:
Q  38 ttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||||| || |||||||||||||| ||||||||    
T  15511441 ttgttataaaaataacttatacataagcacttacatgataa 15511481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 52413223 - 52413258
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcactt 69  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52413223 tcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 16790462 - 16790503
Alignment:
Q  38 ttgttataaaaatagctgatacataagcacttgcatgataaa 79  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  16790462 ttgttataaaaatagcttatacataagcacttatatgataaa 16790503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 24268258 - 24268306
Alignment:
Q  35 cttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    |||||| |||| |||||| | ||||||||||||||| ||||||||||||    
T  24268258 cttttgctatagaaatagtttatacataagcacttgtatgataaacgct 24268306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 41028953 - 41028997
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||    
T  41028953 tcttttgttatagaaatagcttatacataagcacttatatgataa 41028997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 7096229 - 7096271
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgat 76  Q
    |||||||||||| |||||||| ||||||||||||||| |||||    
T  7096229 tcttttgttatagaaatagcttatacataagcacttgtatgat 7096271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 26516266 - 26516180
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcg-ttaattgagctgtttatccaaac 119  Q
    ||||||||| || |||||||| ||||||||||||||  ||||||| |||| ||   ||||||| |||||| || |||||||||||||    
T  26516266 tcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatccaaac 26516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 10391321 - 10391277
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    ||||||||||||||||||||| |||| |||||||||  |||||||    
T  10391321 tcttttgttataaaaatagcttatacgtaagcacttatatgataa 10391277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 13224397 - 13224353
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||    
T  13224397 tcttttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 31030233 - 31030265
Alignment:
Q  37 tttgttataaaaatagctgatacataagcactt 69  Q
    |||||||||||||||||| ||||||||||||||    
T  31030233 tttgttataaaaatagcttatacataagcactt 31030265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 24146362 - 24146404
Alignment:
Q  35 cttttgttataaaaatagctgatacataagcacttgcatgata 77  Q
    ||||||||||| ||||| || ||||||||||||||||||||||    
T  24146362 cttttgttatagaaataacttatacataagcacttgcatgata 24146404  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 38651511 - 38651557
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    |||||||||||| || ||||| |||||||||||||| ||||||||||    
T  38651511 tcttttgttatagaattagcttatacataagcacttacatgataaac 38651557  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 871013 - 870964
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    ||||||||||||||||||| | ||||||||||||||  ||||||| ||||    
T  871013 tcttttgttataaaaatagtttatacataagcacttatatgataagcgct 870964  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 5290606 - 5290566
Alignment:
Q  37 tttgttataaaaatagctgatacataagcacttgcatgata 77  Q
    ||||||||| |||||||| ||||||||||||||| ||||||    
T  5290606 tttgttatagaaatagcttatacataagcacttgtatgata 5290566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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