View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8091_low_18 (Length: 457)

Name: NF8091_low_18
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8091_low_18
NF8091_low_18
[»] chr7 (8 HSPs)
chr7 (1-441)||(33885719-33886159)
chr7 (34-120)||(33894505-33894591)
chr7 (34-83)||(5276143-5276192)
chr7 (36-81)||(45078214-45078259)
chr7 (34-69)||(25670687-25670722)
chr7 (34-83)||(29574703-29574752)
chr7 (34-78)||(5373149-5373193)
chr7 (34-120)||(30133932-30134017)
[»] chr2 (4 HSPs)
chr2 (34-80)||(18962140-18962186)
chr2 (37-69)||(3235487-3235519)
chr2 (37-120)||(10190161-10190244)
chr2 (35-83)||(29430675-29430723)
[»] chr6 (6 HSPs)
chr6 (34-85)||(4247736-4247787)
chr6 (34-121)||(33416266-33416353)
chr6 (34-69)||(33259749-33259784)
chr6 (36-78)||(29249398-29249440)
chr6 (34-78)||(2514626-2514670)
chr6 (41-77)||(2732338-2732374)
[»] chr4 (6 HSPs)
chr4 (34-83)||(4191658-4191707)
chr4 (37-80)||(21157690-21157733)
chr4 (38-118)||(43932316-43932397)
chr4 (34-79)||(51555969-51556014)
chr4 (36-80)||(2980575-2980619)
chr4 (38-78)||(15511441-15511481)
[»] chr3 (4 HSPs)
chr3 (34-69)||(52413223-52413258)
chr3 (38-79)||(16790462-16790503)
chr3 (35-83)||(24268258-24268306)
chr3 (34-78)||(41028953-41028997)
[»] chr5 (5 HSPs)
chr5 (34-76)||(7096229-7096271)
chr5 (34-119)||(26516180-26516266)
chr5 (34-78)||(10391277-10391321)
chr5 (34-78)||(13224353-13224397)
chr5 (37-69)||(31030233-31030265)
[»] chr1 (3 HSPs)
chr1 (35-77)||(24146362-24146404)
chr1 (34-80)||(38651511-38651557)
chr1 (34-83)||(870964-871013)
[»] chr8 (1 HSPs)
chr8 (37-77)||(5290566-5290606)


Alignment Details
Target: chr7 (Bit Score: 421; Significance: 0; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 1 - 441
Target Start/End: Original strand, 33885719 - 33886159
Alignment:
Q  1 ttaattgagttgtttatccaaacatagcctatgtcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcgttaa 100  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33885719 ttaattgagttgtttatccaaacatggcctatgtcttttattataaaaattgctgatacataagcacttgcatgataaacggtcatatcataagcgttaa 33885818  T
Q  101 ttgagctgtttatccaaacaaccttgtttgattcttttcttttttgtgtgactctttaatgcattcttaagtgtagctgattttgaatattgtggacaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33885819 ttgagctgtttatccaaacaaccttgtttgattcttttcttttttgtgtgactctttaatgcattcttaagtgtagctgattttgaatattgtggacaat 33885918  T
Q  201 ttctattttacagccactggtgaaaactgcaagggagacccttatgagaatgttatattcttgcatggatttatgtgttcttcctcattttggactcaaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33885919 ttctattttacagccactggtgaaaactgcaagggagacccttatgagaatgttatattcttgcatggatttatgtgttcttcctcattttggactcaaa 33886018  T
Q  301 cagcgtttccatgtttctctgaaaatgtaaatcataattacagattgattgcaatagacctgttgggatttggaaagagtccaaagccaagagattgttt 400  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33886019 cagtgtttccatgtttctctgaaaatgtaaatcataattacagattgattgcaatagacctgttgggatttggaaagagtccaaagccaagagattgttt 33886118  T
Q  401 gtacacattgaaggatcatgtggaaatgattgagaaatctg 441  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33886119 gtacacattgaaggatcatgtggaaatgattgagaaatctg 33886159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 33894591 - 33894505
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcgttaattgagctgtttatccaaaca 120  Q
    |||||||||||| |||||||| |||||||||||||| |||||| |||  |||| ||||||||  | ||| |  ||||||||||||||    
T  33894591 tcttttgttatagaaatagcttatacataagcacttacatgatgaacattcatgtcataagcacttattaaattgtttatccaaaca 33894505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 5276192 - 5276143
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    ||||||||||||||||||||| ||||||||||||||  | ||||||||||    
T  5276192 tcttttgttataaaaatagcttatacataagcacttaaacgataaacgct 5276143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Complemental strand, 45078259 - 45078214
Alignment:
Q  36 ttttgttataaaaatagctgatacataagcacttgcatgataaacg 81  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||    
T  45078259 ttttgttataaaaatagcttatacataagcacttatatgataaacg 45078214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 25670687 - 25670722
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcactt 69  Q
    ||||||||||||||||||||| ||||||||||||||    
T  25670687 tcttttgttataaaaatagcttatacataagcactt 25670722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Original strand, 29574703 - 29574752
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    |||||||| |||||||||||| ||||||||||| ||  ||||||||||||    
T  29574703 tcttttgtcataaaaatagcttatacataagcatttatatgataaacgct 29574752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 5373193 - 5373149
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||| |||||||  |||||||||||||| ||||||||    
T  5373193 tcttttgttatagaaatagcatatacataagcacttacatgataa 5373149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 30134017 - 30133932
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagc-gttaattgagctgtttatccaaaca 120  Q
    ||||||||| ||||||||||| |||||||| |||||  ||||||| |||| ||   ||||||  ||||||||| ||||||||||||||    
T  30134017 tcttttgttgtaaaaatagcttatacataaacactt--atgataagcgcttatgctataagcatttaattgagttgtttatccaaaca 30133932  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 18962140 - 18962186
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||    
T  18962140 tcttttgttataaaaatagctaatacataagcacttacatgataaac 18962186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 3235487 - 3235519
Alignment:
Q  37 tttgttataaaaatagctgatacataagcactt 69  Q
    |||||||||||||||||| ||||||||||||||    
T  3235487 tttgttataaaaatagctaatacataagcactt 3235519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 10190244 - 10190161
Alignment:
Q  37 tttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcg-ttaattgagctgtttatccaaaca 120  Q
    |||||||||||||||| | ||||||||||||||  ||||||| | ||| ||  ||||| | ||||||||||| ||||||||||||    
T  10190244 tttgttataaaaatagtttatacataagcacttatatgataaccactcctactataagtgcttaattgagct-tttatccaaaca 10190161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Complemental strand, 29430723 - 29430675
Alignment:
Q  35 cttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    ||||||||||| |||||||| |||||||| | |||| ||||||||||||    
T  29430723 cttttgttatagaaatagcttatacataaacccttgtatgataaacgct 29430675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 4247736 - 4247787
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctca 85  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||| ||||    
T  4247736 tcttttgttatagaaatagcttatacataagcacttacatgataaacactca 4247787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 34 - 121
Target Start/End: Complemental strand, 33416353 - 33416266
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcgttaattgagctgtttatccaaacaa 121  Q
    ||||||||||||||||||||| ||||||||||||||  || || | |||| || | |||||| ||||||  | |||||||||||||||    
T  33416353 tcttttgttataaaaatagcttatacataagcactttgataatgagcgcttatcttataagctttaattaggttgtttatccaaacaa 33416266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Complemental strand, 33259784 - 33259749
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcactt 69  Q
    ||||||||||||||||||||| ||||||||||||||    
T  33259784 tcttttgttataaaaatagcttatacataagcactt 33259749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 29249440 - 29249398
Alignment:
Q  36 ttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||| |||||||||||||||||||||||  |||||||    
T  29249440 ttttgttatagaaatagctgatacataagcacttatatgataa 29249398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 2514670 - 2514626
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||    
T  2514670 tcttttattatagaaatagcttatacataagcacttacatgataa 2514626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 2732338 - 2732374
Alignment:
Q  41 ttataaaaatagctgatacataagcacttgcatgata 77  Q
    |||||||||||||| |||||||| |||||||||||||    
T  2732338 ttataaaaatagcttatacataaacacttgcatgata 2732374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 4191707 - 4191658
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    |||||||||||| |||||||| ||||||||||||||  ||||||||||||    
T  4191707 tcttttgttatagaaatagcttatacataagcacttatatgataaacgct 4191658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 21157733 - 21157690
Alignment:
Q  37 tttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    |||||||| ||||||||||||||||||||||||  |||||||||    
T  21157733 tttgttatcaaaatagctgatacataagcacttatatgataaac 21157690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 43932397 - 43932316
Alignment:
Q  38 ttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcg-ttaattgagctgtttatccaaa 118  Q
    ||||| ||||||||| | ||||||||||||||| ||||||||| || || | ||||| | |||||| | |||||||||||||    
T  43932397 ttgttgtaaaaatagtttatacataagcacttgtatgataaacacttatgttataagtgcttaattaatctgtttatccaaa 43932316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 51555969 - 51556014
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaa 79  Q
    ||||||||||||| ||||||| ||||||||||||||  ||||||||    
T  51555969 tcttttgttataataatagcttatacataagcacttatatgataaa 51556014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 2980575 - 2980619
Alignment:
Q  36 ttttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    |||||||||| |||||||| ||||||||||||||  |||||||||    
T  2980575 ttttgttatagaaatagcttatacataagcacttatatgataaac 2980619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 15511441 - 15511481
Alignment:
Q  38 ttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||||| || |||||||||||||| ||||||||    
T  15511441 ttgttataaaaataacttatacataagcacttacatgataa 15511481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 52413223 - 52413258
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcactt 69  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52413223 tcttttgttataaaaatagcttatacataagcactt 52413258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 16790462 - 16790503
Alignment:
Q  38 ttgttataaaaatagctgatacataagcacttgcatgataaa 79  Q
    ||||||||||||||||| ||||||||||||||  ||||||||    
T  16790462 ttgttataaaaatagcttatacataagcacttatatgataaa 16790503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 24268258 - 24268306
Alignment:
Q  35 cttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    |||||| |||| |||||| | ||||||||||||||| ||||||||||||    
T  24268258 cttttgctatagaaatagtttatacataagcacttgtatgataaacgct 24268306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 41028953 - 41028997
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||    
T  41028953 tcttttgttatagaaatagcttatacataagcacttatatgataa 41028997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000004; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 7096229 - 7096271
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgat 76  Q
    |||||||||||| |||||||| ||||||||||||||| |||||    
T  7096229 tcttttgttatagaaatagcttatacataagcacttgtatgat 7096271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 119
Target Start/End: Complemental strand, 26516266 - 26516180
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgctcatatcataagcg-ttaattgagctgtttatccaaac 119  Q
    ||||||||| || |||||||| ||||||||||||||  ||||||| |||| ||   ||||||| |||||| || |||||||||||||    
T  26516266 tcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatccaaac 26516180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 10391321 - 10391277
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    ||||||||||||||||||||| |||| |||||||||  |||||||    
T  10391321 tcttttgttataaaaatagcttatacgtaagcacttatatgataa 10391277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 13224397 - 13224353
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataa 78  Q
    |||||||||||| |||||||| ||||||||||||||  |||||||    
T  13224397 tcttttgttatagaaatagcttatacataagcacttctatgataa 13224353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 69
Target Start/End: Original strand, 31030233 - 31030265
Alignment:
Q  37 tttgttataaaaatagctgatacataagcactt 69  Q
    |||||||||||||||||| ||||||||||||||    
T  31030233 tttgttataaaaatagcttatacataagcactt 31030265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 24146362 - 24146404
Alignment:
Q  35 cttttgttataaaaatagctgatacataagcacttgcatgata 77  Q
    ||||||||||| ||||| || ||||||||||||||||||||||    
T  24146362 cttttgttatagaaataacttatacataagcacttgcatgata 24146404  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 38651511 - 38651557
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaac 80  Q
    |||||||||||| || ||||| |||||||||||||| ||||||||||    
T  38651511 tcttttgttatagaattagcttatacataagcacttacatgataaac 38651557  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 83
Target Start/End: Complemental strand, 871013 - 870964
Alignment:
Q  34 tcttttgttataaaaatagctgatacataagcacttgcatgataaacgct 83  Q
    ||||||||||||||||||| | ||||||||||||||  ||||||| ||||    
T  871013 tcttttgttataaaaatagtttatacataagcacttatatgataagcgct 870964  T

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Target: chr8 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 5290606 - 5290566
Alignment:
Q  37 tttgttataaaaatagctgatacataagcacttgcatgata 77  Q
    ||||||||| |||||||| ||||||||||||||| ||||||    
T  5290606 tttgttatagaaatagcttatacataagcacttgtatgata 5290566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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