View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8091_low_22 (Length: 407)
Name: NF8091_low_22
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8091_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 430197 - 429816
Alignment:
| Q |
1 |
aacaagagacatcaacgccgtttagtctacatcaccatcctcttaaatataaagttggtcataatatcagttaataatataaagttggtacattttggtt |
100 |
Q |
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| T |
430197 |
aacaagagacatcaacgccgtttagtctacatcaccatcctcttaaatataaagttggttataatatcagttaataatataaagttggtacattttggtt |
430098 |
T |
|
| Q |
101 |
cacaaggaattagtccagttagaaaatgtaaagttagtgttttataaaggtagtttttgttcagttgggaaacactaaactgtttcactgagacattgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
430097 |
cacaaggaattagtccagttagaaaatgtaaagttagtgttttataaaggtagtttttgttcagttgggaaacactaaactgtttcaccgagacattgta |
429998 |
T |
|
| Q |
201 |
ccagtttggggctaactattaaaactttggttaagttttaccgaactgttgcaactgagtgtcagtgtcttatcaggtatatgtgattcataaacaatca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
429997 |
ccagtttggggctaactattaaaactttggttaagttttaccgaactgttgcaactgagtgtcagtgtcttatcaggtatatgtgattcataaacaatca |
429898 |
T |
|
| Q |
301 |
tgctatacttcatttccttcatggaattaatatgttgacgacattaaggtttatcaagagaatgctataaaagataataaga |
382 |
Q |
| |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
429897 |
tgctatacttcatttccttcatagaattaatatgttgacgacattaaggtttatcaagagaatgctataaaagataataaga |
429816 |
T |
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