View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8091_low_27 (Length: 353)
Name: NF8091_low_27
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8091_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 22 - 336
Target Start/End: Original strand, 47120717 - 47121030
Alignment:
| Q |
22 |
atactttatcctaggtgcttataattgtaacattgaaatttagaagaaataatctcacatgaattttggttaaattagatatgtaactggcttaactctc |
121 |
Q |
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| T |
47120717 |
atactttatcctaggtgcttataattgtaacattgaaatttagaagaaataatctcacatgaattttggttaaattagatatgtaaccggcttaactccc |
47120816 |
T |
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| Q |
122 |
ccctttgaaacattggttattataacatcaattttttcttcatacttagaggtggttatgttttgcatacaccttttttgggtatgtcattcttacatgt |
221 |
Q |
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| T |
47120817 |
ccctt-gaaacattggttattataacatcaattttttcttcatacttagaggtggttatgttttgcatacaccttttttgggtatgtcattcttacatgt |
47120915 |
T |
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| Q |
222 |
gcatcctcagcttcgacatgcagatgagagatgcgaggaagctgaaatgagagttaggcaactagagcaacaggtaatacattttttgaaacatttaata |
321 |
Q |
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| T |
47120916 |
gcatcctcagcttcgacatgcagatgagagatgcgaggaagctgaaatgagagttaggcaactagagcaacaggtaatacattttttgaaacatttaata |
47121015 |
T |
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| Q |
322 |
tgtgcatgttgcttt |
336 |
Q |
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| T |
47121016 |
tgtgcatgttgcttt |
47121030 |
T |
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