View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8091_low_30 (Length: 301)
Name: NF8091_low_30
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8091_low_30 |
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Alignment Details
Target: chr5 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 14582300 - 14582585
Alignment:
| Q |
1 |
tccccactacctttctatgtggagccctttaagcatcctctaaaccaatccatcaagacttgaatcttgtttgtaataaggatgaagcttctttgttggc |
100 |
Q |
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| T |
14582300 |
tccccactacctttctatgtggagccctttaagcatcctctaaaccaatccatcaagacttgaatcttgtttgtaataaggatgaagcttctttgttggc |
14582399 |
T |
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| Q |
101 |
aaaaatcaatccatggttcttaaaacaaacatggagagaagtgtgagagggtattaaacaaaaaccctacacactctccctccattttcctaaacagttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14582400 |
aaaaatcaatccatggttcttaaaacaaacatggagagaagtgtgagagggtattaaacaaaaaccctacacactctccctccattttcctaaacagttt |
14582499 |
T |
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| Q |
201 |
gctttgtgctttagcttttggcttctcatatcacaaagggattatgcttttttctgagtagcagaagcaaataattaagcattttt |
286 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14582500 |
gctttgtgctttagcttttggcttctcatatcacaaagggattatgcttttttctgagtagcagaagcaaataattaagcattttt |
14582585 |
T |
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