View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8091_low_34 (Length: 285)
Name: NF8091_low_34
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8091_low_34 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 239; Significance: 1e-132; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 18 - 284
Target Start/End: Complemental strand, 4564344 - 4564078
Alignment:
| Q |
18 |
ggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
4564344 |
ggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggaagc |
4564245 |
T |
|
| Q |
118 |
attacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattg |
217 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4564244 |
attacagttatgacaccaaaacaactgttggaatttgcttgggggttggccaattgcaataaaccctttttgtggatcattaggcctgaccttgtcattg |
4564145 |
T |
|
| Q |
218 |
gtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564144 |
gtggctcagtcgttttgtcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
4564078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 24 - 284
Target Start/End: Complemental strand, 4602416 - 4602156
Alignment:
| Q |
24 |
tttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattaca |
123 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||| |
|
|
| T |
4602416 |
tttaggttccaacctctggaaagaagatactgagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggcagcattaca |
4602317 |
T |
|
| Q |
124 |
gttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggct |
223 |
Q |
| |
|
||| ||||||| | ||| | || ||||| |||||||| |||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4602316 |
gttatgacaccccatcaattattagaattcgcttggggtttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattggtggct |
4602217 |
T |
|
| Q |
224 |
cagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||| |||| |||||||||||| ||||||||||||||||||||| |||| |||||||| |
|
|
| T |
4602216 |
cagtgattttgtcatctgagtttacaaatgaaatttcagatagaggcctaatagcaagttg |
4602156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 22 - 284
Target Start/End: Complemental strand, 4617651 - 4617389
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatta |
121 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||| ||||||| |
|
|
| T |
4617651 |
tctttagattccaacctttggaaagaagatacagagtgtcttgattggcttgaatccaaggagccgggatcagttgtttatgtgaatttcggcagcatta |
4617552 |
T |
|
| Q |
122 |
cagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtgg |
221 |
Q |
| |
|
||||| ||||||| || ||| | |||||||||||||||| |||||||||| ||| ||| |||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
4617551 |
cagttatgacacccgagcaattactggaatttgcttggggtttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattggtgg |
4617452 |
T |
|
| Q |
222 |
ctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||||| |||| |||||||||||| ||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
4617451 |
ctcagtgattttctcatctgagtttacaaatgaaattgcagatagaggcctaatagcaagttg |
4617389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 22 - 270
Target Start/End: Original strand, 4299324 - 4299572
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatta |
121 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||| ||| |
|
|
| T |
4299324 |
tctttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaattttggcagcgtta |
4299423 |
T |
|
| Q |
122 |
cagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtgg |
221 |
Q |
| |
|
||||| |||| ||||| |||||||| || |||||||||| |||||||||| || |||||||||||||||||||||||||| |||||||||||||| || |
|
|
| T |
4299424 |
cagttatgactccagagcaactgttagagattgcttggggtttggccaattgcaggaaaccatttttgtggatcattaggccagaccttgtcattggcgg |
4299523 |
T |
|
| Q |
222 |
ctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggc |
270 |
Q |
| |
|
|| | |||| ||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
4299524 |
cttgtttattttgtcatctgagtttgagaatgaaatttcaaatagaggc |
4299572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 4592864 - 4592607
Alignment:
| Q |
18 |
ggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagc |
117 |
Q |
| |
|
||||||||| ||||||||| | ||||||||||||||| |||||||| ||||||||||||| ||||| || | ||||||||||||||||||||||| ||| |
|
|
| T |
4592864 |
ggattcttttggttccaacatatggaaagaagatactgagtgtcttaaatggcttgaatcgaaggaatcgggttccgttgtttatgtgaatttcggcagc |
4592765 |
T |
|
| Q |
118 |
attacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattg |
217 |
Q |
| |
|
|||||||| ||| ||| || |||| || ||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
4592764 |
cttacagttatgaatgaagagaaaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgtggatcattaggcctgatcttgtcattg |
4592665 |
T |
|
| Q |
218 |
gtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
||||| || | ||||| ||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
4592664 |
gtggcacaattgttttgtcatcggagtttgtgaatgaaatttcagatagaggcgtaat |
4592607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 22 - 281
Target Start/End: Complemental strand, 4598800 - 4598541
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatta |
121 |
Q |
| |
|
||||||||| |||| ||||||||||||||||| ||||||||||| |||||||||||||| || || || || ||||||||||||||||| || ||||| | |
|
|
| T |
4598800 |
tctttaggtaccaatctttggaaagaagataccaagtgtcttgactggcttgaatccaatgaaccaaggtctgttgtttatgtgaattttgggagcataa |
4598701 |
T |
|
| Q |
122 |
cagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtgg |
221 |
Q |
| |
|
| || |||| ||||| | |||| || ||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4598700 |
cggtgatgactgcagaaaagttgttagactttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtgg |
4598601 |
T |
|
| Q |
222 |
ctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaag |
281 |
Q |
| |
|
||| || ||||| ||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4598600 |
ctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcttagttgcaag |
4598541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 32 - 275
Target Start/End: Original strand, 4613231 - 4613474
Alignment:
| Q |
32 |
ccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgac |
131 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |||||||||||||||||||| || ||||| || ||| |||| |
|
|
| T |
4613231 |
ccaatctttggaaagaagataccaagtgtcttgattggcttgaatccaaggaaccgaagtccgttgtttatgtgaattttgggagcatgaccgttatgac |
4613330 |
T |
|
| Q |
132 |
accagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgtt |
231 |
Q |
| |
|
||||| |||| || || ||||||||||| ||||| ||| ||| |||| ||||||||||||||||||||||| ||||||||||| |||||||| ||| |
|
|
| T |
4613331 |
tgcagaaaaactattagagtttgcttggggtttggcgaatagcaagcaaccctttttgtggatcattaggcctgatcttgtcattggcggctcagttgtt |
4613430 |
T |
|
| Q |
232 |
ttatcatctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
4613431 |
ttgtcatcagagtttgtgaatgaaatttcagatagaggcctaat |
4613474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 25 - 246
Target Start/End: Original strand, 4256130 - 4256351
Alignment:
| Q |
25 |
ttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagcc-gagatccgttgtttatgtgaatttcggaagcattaca |
123 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||| || |||||||| |||||||| || ||||||||| |
|
|
| T |
4256130 |
ttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatccaaggaacctgag-tctgttgtttacgtgaattttggcagcattaca |
4256228 |
T |
|
| Q |
124 |
gttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggct |
223 |
Q |
| |
|
||| |||| ||||| |||||||| || ||||||||||| ||||||||| ||| |||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
4256229 |
gttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgtgtatcattaggcctgacctcgtcattggtggct |
4256328 |
T |
|
| Q |
224 |
cagtcgttttatcatctgagttt |
246 |
Q |
| |
|
| | |||| |||||||||||| |
|
|
| T |
4256329 |
cctttattttgtcatctgagttt |
4256351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 32 - 278
Target Start/End: Complemental strand, 4571591 - 4571345
Alignment:
| Q |
32 |
ccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgac |
131 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| || |||| |||||| |||| |
|
|
| T |
4571591 |
ccaatctttggaaagaagataacaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagcaggacagttatgac |
4571492 |
T |
|
| Q |
132 |
accagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgtt |
231 |
Q |
| |
|
||||| ||||||| || ||||| ||||| || || ||| ||| ||| |||||||||||||||||||| || |||||||||||||||||||| ||| |
|
|
| T |
4571491 |
ttcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgtggatcattaggcccgatcttgtcattggtggctcagttgtt |
4571392 |
T |
|
| Q |
232 |
ttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgc |
278 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4571391 |
ttgtcatcggagtttgtgaatgaaatttcagatagaggcctaattgc |
4571345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 32 - 275
Target Start/End: Complemental strand, 4557744 - 4557501
Alignment:
| Q |
32 |
ccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgac |
131 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||| |||| |
|
|
| T |
4557744 |
ccaatctttggaaagaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaattttgggagcatgacagttatgac |
4557645 |
T |
|
| Q |
132 |
accagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgtt |
231 |
Q |
| |
|
||||| ||||||| || ||||| ||||| || || ||| ||| |||| |||||||||||||||||||| || |||||||| ||||||||||| ||| |
|
|
| T |
4557644 |
ggcagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggtggctcagttgtt |
4557545 |
T |
|
| Q |
232 |
ttatcatctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
|| ||||| |||||||| ||||||||||||||||||||| |||| |
|
|
| T |
4557544 |
ttgtcatcggagtttgtcaatgaaatttcagatagaggcctaat |
4557501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 22 - 284
Target Start/End: Original strand, 4514624 - 4514886
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatta |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||| |||||||||||||||||||| || || | |||| ||||||||||| ||||| || ||||| | |
|
|
| T |
4514624 |
tctttaggttccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaatcaggatctgttgtttatgttaattttggtagcatca |
4514723 |
T |
|
| Q |
122 |
cagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtgg |
221 |
Q |
| |
|
| || || | || || || |||| || ||||||||||| ||||||||| ||| ||| | ||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
4514724 |
cgattatgtctccggagaaattgttagagtttgcttggggtttggccaatagcaagaaaacctttttatggatcattaggcctgatcttgtcattggtgg |
4514823 |
T |
|
| Q |
222 |
ctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||||||| ||||||||||| |||| |||||||| |
|
|
| T |
4514824 |
ctcagtggttttgtcgtctgagtttgtgaatgaaattgcagatagaggcctaatagcaagttg |
4514886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 281
Target Start/End: Complemental strand, 4461744 - 4461493
Alignment:
| Q |
30 |
ttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttg |
129 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||| ||||| ||||| || ||||| |||||| || |
|
|
| T |
4461744 |
ttccaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtctatgtaaattttggcagcatcacagttatg |
4461645 |
T |
|
| Q |
130 |
acaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcg |
229 |
Q |
| |
|
|| || || |||||||| || ||||||||||| ||||| || ||| ||||| ||||| ||||||||||||||||| ||||||||||| ||||| | |
|
|
| T |
4461644 |
actcctgatcaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttatggatcattaggcctgatcttgtcattggcggctcgttta |
4461545 |
T |
|
| Q |
230 |
ttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaag |
281 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
4461544 |
ttttgtcatctgagtttgtgaatgaaatttcagatagaggcctaatagcaag |
4461493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 25 - 275
Target Start/End: Original strand, 4259660 - 4259910
Alignment:
| Q |
25 |
ttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagcc-gagatccgttgtttatgtgaatttcggaagcattaca |
123 |
Q |
| |
|
||||||||||| ||||||||||||||||| || ||||||||||||||||||| ||||| || ||| || |||||||| |||||||| || ||||||||| |
|
|
| T |
4259660 |
ttaggttccaatctttggaaagaagataccaaatgtcttgaatggcttgaatttaaggaacctgag-tctgttgtttacgtgaattttggcagcattaca |
4259758 |
T |
|
| Q |
124 |
gttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggct |
223 |
Q |
| |
|
||| |||| ||||| ||| | || || ||||||||||| ||||||||| ||| ||||| |||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
4259759 |
gttatgactccagatcaatttttagagtttgcttggggattggccaatagcaagaaaccctttttgtggatcattaggcctgacctcattattggtggct |
4259858 |
T |
|
| Q |
224 |
cagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
| | |||| ||||||||||||| || ||||||||| ||||||||| |||| |
|
|
| T |
4259859 |
cctttattttgtcatctgagtttgagagtgaaatttcggatagaggcctaat |
4259910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 22 - 281
Target Start/End: Complemental strand, 4626580 - 4626321
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatta |
121 |
Q |
| |
|
|||||||||||||| |||||||||||||| || || ||||||||||||||||||| |||||| || | || |||||||||||||| || || ||| ||| |
|
|
| T |
4626580 |
tctttaggttccaatctttggaaagaagacaccaattgtcttgaatggcttgaattcaaggaaccaaagtctgttgtttatgtgaactttggcagcgtta |
4626481 |
T |
|
| Q |
122 |
cagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtgg |
221 |
Q |
| |
|
|||| |||| ||| | ||||||| || ||||||||||| ||||| || ||| ||||| ||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
4626480 |
tagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgatcttgtgattggtgg |
4626381 |
T |
|
| Q |
222 |
ctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaag |
281 |
Q |
| |
|
|||| | ||| ||||| ||||||| |||||||||||||||||||||| |||| ||||| |
|
|
| T |
4626380 |
ctcatttatttcgtcatccgagtttgagaatgaaatttcagatagaggcctaatcgcaag |
4626321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 37 - 275
Target Start/End: Complemental strand, 4586250 - 4586012
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||| || |||| |||||| |||| ||| |
|
|
| T |
4586250 |
ctttggaaagaggataccaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagcacaacagttatgactacag |
4586151 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
|| |||| || || ||||||||||| ||||||||| ||| ||| ||||| ||||||||||| ||||| |||||||||||||| || | ||||| || |
|
|
| T |
4586150 |
aaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatggatcattagacctgatcttgtcattggtggttccttggttttgtc |
4586051 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
4586050 |
atctgagtttaagaatgaaatttcagatagaggcctaat |
4586012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 275
Target Start/End: Complemental strand, 4580045 - 4579808
Alignment:
| Q |
38 |
tttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccaga |
137 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||||||||||||||||| || || || ||||||||||||||||| || ||| | |||||| |||| |||| |
|
|
| T |
4580045 |
tttggaaagaagataccaagtgtctttattggcttgaatccaaggaacctaggtctgttgtttatgtgaattttgggagcttgacagttatgactgcaga |
4579946 |
T |
|
| Q |
138 |
acaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatca |
237 |
Q |
| |
|
| ||||||| || ||||| ||||| || || ||| ||| |||| |||||||||||||||||||| || |||||||| || ||||||| ||||| ||| |
|
|
| T |
4579945 |
aaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcatcggcggctcagctgttttgtca |
4579846 |
T |
|
| Q |
238 |
tctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
|| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
4579845 |
tcggagtttgtgaatgaaatttcagatagaggcctaat |
4579808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 21 - 281
Target Start/End: Complemental strand, 4516951 - 4516691
Alignment:
| Q |
21 |
ttctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatt |
120 |
Q |
| |
|
|||| ||||||| || |||||||||||||||| || |||||||||||||||||||| ||||| | | || || |||||||||||||| |||||||| |
|
|
| T |
4516951 |
ttctataggttctaatctttggaaagaagatatgaaatgtcttgaatggcttgaatctaaggaacaaggttctgtagtttatgtgaattttggaagcatc |
4516852 |
T |
|
| Q |
121 |
acagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtg |
220 |
Q |
| |
|
|| || |||| ||||| |||||||| || || |||||||| |||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4516851 |
acggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggattattaggcctgaccttgtcattggtg |
4516752 |
T |
|
| Q |
221 |
gctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaag |
281 |
Q |
| |
|
|||| || |||| ||||| || ||||||||||||| ||| ||||||||| |||| ||||| |
|
|
| T |
4516751 |
gctcggttattttgtcatccgattttgtgaatgaaacttcggatagaggcgtaatagcaag |
4516691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 22 - 284
Target Start/End: Complemental strand, 3172370 - 3172108
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatta |
121 |
Q |
| |
|
||||||| ||| || |||||||||||||||||||| |||||||||||||||||| | || || | | ||| ||||||||||| ||||| || ||||| | |
|
|
| T |
3172370 |
tctttagattctaatctttggaaagaagatactaaatgtcttgaatggcttgaaacaaaagaatcaaaatctgttgtttatgtaaattttggcagcatca |
3172271 |
T |
|
| Q |
122 |
cagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtgg |
221 |
Q |
| |
|
|||| || | | ||| || | || || ||||||||||| || ||||| ||| ||||| ||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
3172270 |
tagttatgtctcaagagaaattattagagtttgcttggggtttagccaacagcaagaaaccctttttgtggattattaggcctgatcttgtcattggtgg |
3172171 |
T |
|
| Q |
222 |
ctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
||| || ||||| ||||| |||||||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
3172170 |
ctcggttgttttgtcatcggagtttgtgaatgaaatttcagatagaggcctaatagcaagttg |
3172108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 284
Target Start/End: Original strand, 4266677 - 4266931
Alignment:
| Q |
30 |
ttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttg |
129 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||| ||||||||||| || || || ||||| ||||||||||| ||||| || ||||| |||||| || |
|
|
| T |
4266677 |
ttccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggtagcatcacagttatg |
4266776 |
T |
|
| Q |
130 |
acaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcg |
229 |
Q |
| |
|
||| ||| | || || || ||||||||||| |||||||| ||| || || ||||||||||| ||||||||||| ||||||||||| |||||||| | |
|
|
| T |
4266777 |
tcacgagagaagctcttagagtttgcttggggtttggccaacagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttg |
4266876 |
T |
|
| Q |
230 |
ttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||| |||||||| ||| | || ||||||||||||||||| |||| |||||||| |
|
|
| T |
4266877 |
ttttgtcatctgatttttttaaagaaatttcagatagaggactaatagcaagttg |
4266931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 37 - 284
Target Start/End: Complemental strand, 4574922 - 4574675
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| ||||||| || || || ||||| ||||||||||| ||||| || ||||| || ||| || | | || |
|
|
| T |
4574922 |
ctttggaaagaagatactaaatgtcttgaatggattgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
4574823 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
| | || | || ||||||||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||| || |
|
|
| T |
4574822 |
agaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtggttttctc |
4574723 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||||| |||| |||||||| |
|
|
| T |
4574722 |
atctgattttttgaaagaaatttcagatagaggactaatagcaagttg |
4574675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 26 - 284
Target Start/End: Complemental strand, 4622765 - 4622509
Alignment:
| Q |
26 |
taggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagt |
125 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| || || ||||||| |||||||| || ||||||||||| |
|
|
| T |
4622765 |
taggttccaatctttggaaagaagatatcaagtgtcttgagtggcttgaatccaaggaacctgactc--ttgtttacgtgaattttggcagcattacagt |
4622668 |
T |
|
| Q |
126 |
tttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctca |
225 |
Q |
| |
|
|||| | ||| ||||| || || ||||||||||| ||||| || ||| ||||| |||||||||||||||||||||||||||||||| || ||||| |
|
|
| T |
4622667 |
gatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtggatcattaggcctgaccttgtcatgggcggctcg |
4622568 |
T |
|
| Q |
226 |
gtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
| |||| ||||||||||||| |||||||||||||| ||||||| |||| ||| |||| |
|
|
| T |
4622567 |
tttattttgtcatctgagtttgagaatgaaatttcaggtagaggcctaatcgcaggttg |
4622509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 37 - 275
Target Start/End: Complemental strand, 4470417 - 4470179
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||| || || || |||| ||||| ||||| |||||||| ||| | |||||| || | |||| |
|
|
| T |
4470417 |
ctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaggatctgttgtctatgtaaatttcggcagcgtcacagttatgtctccag |
4470318 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
| ||||||| || ||||||||||| ||||| ||| ||| |||| |||||||||||||||||||| || ||||||||||| ||||| || ||||| || |
|
|
| T |
4470317 |
agaaactgttagagtttgcttggggtttggcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcattggcggctcggtagttttctc |
4470218 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
||| ||| |||| |||| |||||||||||||||| |||| |
|
|
| T |
4470217 |
atcagagattgtaaatggaatttcagatagaggcctaat |
4470179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 267
Target Start/End: Complemental strand, 4506485 - 4506241
Alignment:
| Q |
23 |
ctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattac |
122 |
Q |
| |
|
|||||| ||| || ||||||||||| |||||||| ||||| |||||||| ||||| || || ||| || ||||||||||||||||| |||||||| || |
|
|
| T |
4506485 |
ctttagattcaaatctttggaaagaggatactaaatgtctcgaatggctggaatcaaaagaaccggcttctgttgtttatgtgaattttggaagcatcac |
4506386 |
T |
|
| Q |
123 |
agttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggc |
222 |
Q |
| |
|
| || || | || || || | || || ||||||||||| ||||||||| ||| ||||| ||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
4506385 |
aattatgtctccggagaaatttttagagtttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtaattggtggc |
4506286 |
T |
|
| Q |
223 |
tcagtcgttttatcatctgagtttgtgaatgaaatttcagataga |
267 |
Q |
| |
|
||||| ||||| || || ||||||| |||||||||||||||||| |
|
|
| T |
4506285 |
tcagtggttttgtcttcagagtttgcaaatgaaatttcagataga |
4506241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 37 - 269
Target Start/End: Original strand, 4503915 - 4504147
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||||||||| || || || |||| ||||||||||| ||||| || |||||||||||| || | || |
|
|
| T |
4503915 |
ctttggaaagaagatactaaatgtcttgattggcttgaattaaaagaaccaggatctgttgtttatgtaaattttggcagcattacagttatgtcttaag |
4504014 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
| || |||| || ||||||||||| ||||||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| || || || |
|
|
| T |
4504015 |
ataaattgttagagtttgcttggggtttggccaatagcaagaaaccttttttgtggattattaggcctgatcttgttattggtggctcagaggtgttgtc |
4504114 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagagg |
269 |
Q |
| |
|
|||||| ||||||||||||| ||| ||||||| |
|
|
| T |
4504115 |
atctgattttgtgaatgaaacttctaatagagg |
4504147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 4458216 - 4457961
Alignment:
| Q |
30 |
ttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttg |
129 |
Q |
| |
|
|||||| |||||||||||| ||||||| |||||||| ||||||||||| || || || | || ||| ||||||| ||||| |||||||| |||||| || |
|
|
| T |
4458216 |
ttccaatctttggaaagaatatactaaatgtcttgagtggcttgaatcaaaagaaccaaagtctgttatttatgtaaattttggaagcatcacagttatg |
4458117 |
T |
|
| Q |
130 |
acaccagaacaactgttggaatttgcttgggggttggccaattacaa-taaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtc |
228 |
Q |
| |
|
| | ||| | || || ||||||||||||| |||||||| ||| ||||| ||||||||||| | ||||||||| ||||||||||||||||| || |
|
|
| T |
4458116 |
tctcaagagaagctcttagaatttgcttgggttttggccaacagcaagaaaaccttttttgtggataactaggcctgatcttgtcattggtggctcggtt |
4458017 |
T |
|
| Q |
229 |
gttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
||||| ||||| || ||||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
4458016 |
gttttgtcatcggattttgtgaatgaaacttctgatagaggcttaatagcaagttg |
4457961 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 284
Target Start/End: Complemental strand, 4481307 - 4481060
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| ||||| || ||||| ||| || || | | || |
|
|
| T |
4481307 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcacaattatgtctcaag |
4481208 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
| |||| || || ||||||||||| || |||||| ||| ||| ||||||||||| |||||| || | |||||||||||||||||||| || || || |
|
|
| T |
4481207 |
agaaactcttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtggattattaggtctaatcttgtcattggtggctcagtggtgttgtc |
4481108 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||||||| | |||| ||||||||| |||||||| |||| |||||||| |
|
|
| T |
4481107 |
atctgagtatttgaaagaaatttcaaatagaggcctaatagcaagttg |
4481060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 284
Target Start/End: Original strand, 4489873 - 4490120
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| ||||| || ||||| || ||| || | | || |
|
|
| T |
4489873 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
4489972 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
| | || || || ||||| ||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||| |||||||||||| || || || |
|
|
| T |
4489973 |
agaagctattagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgttattggtggctcacaggtgttgtc |
4490072 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||||| |||| |||||||| |
|
|
| T |
4490073 |
atctgattttttgaaagaaatttcagatagaggactaatagcaagttg |
4490120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 284
Target Start/End: Complemental strand, 4561118 - 4560873
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| ||||| || ||||| || ||| | | | || |
|
|
| T |
4561118 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgttaagtctcaag |
4561019 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
| | | || || ||||||||||| |||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||| || ||||| || |
|
|
| T |
4561018 |
agaagcc-ttagagtttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattggtggctcggtggttttctc |
4560920 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||||| ||| |||| ||||||||||||||||| |||| |||||||| |
|
|
| T |
4560919 |
atctga-tttttgaaagaaatttcagatagaggactaatagcaagttg |
4560873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 178 - 270
Target Start/End: Complemental strand, 4568529 - 4568437
Alignment:
| Q |
178 |
aaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggc |
270 |
Q |
| |
|
||||| ||||||||||||||||||||| | |||||||||||||||||||| |||| ||||| ||||||||||||| || ||| ||||||||| |
|
|
| T |
4568529 |
aaaccttttttgtggatcattaggccttagcttgtcattggtggctcagttattttgtcatccgagtttgtgaatggaacttcggatagaggc |
4568437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 4835518 - 4835571
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaa |
75 |
Q |
| |
|
|||||||||||| | |||||||| |||||||| || |||||||||||||||||| |
|
|
| T |
4835518 |
tctttaggttccgatctttggaaggaagatacaaaatgtcttgaatggcttgaa |
4835571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 4391794 - 4391873
Alignment:
| Q |
190 |
tggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagagg |
269 |
Q |
| |
|
||||||||||||| ||||||||||||||| | ||| ||||| | || ||||| || ||||||||||||||||||||| |
|
|
| T |
4391794 |
tggatcattaggcttgaccttgtcattggcaggtcatgtgttttgttatatgagtatgagaatgaaatttcagatagagg |
4391873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 154; Significance: 1e-81; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 22 - 275
Target Start/End: Complemental strand, 1674855 - 1674602
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcatta |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||| ||||||| |
|
|
| T |
1674855 |
tctttaggttccaacctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaatttcggtagcatta |
1674756 |
T |
|
| Q |
122 |
cagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtgg |
221 |
Q |
| |
|
||| |||| ||||| ||||| ||||| ||||||||||| |||||| ||| ||| ||||| ||||||||||||| ||||||||| |||||||||||||| |
|
|
| T |
1674755 |
ttgttatgactccagatcaactattggagtttgcttggggtttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattggtgg |
1674656 |
T |
|
| Q |
222 |
ctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
|||||| ||||| |||||||||||| |||| |||||||||||||||||| |||| |
|
|
| T |
1674655 |
ctcagtggttttgtcatctgagtttatgaaagaaatttcagatagaggcctaat |
1674602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 37 - 267
Target Start/End: Original strand, 16685785 - 16686015
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| || ||||| |||||| |||| ||| |
|
|
| T |
16685785 |
ctttggaaataagataccaagtgtcttgattggcttgaatccaaggaaccgagttccgttgtttatgtgaattttgggagcatgacagttatgactgcag |
16685884 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
|| |||| || || ||||||||||| ||| ||||| ||| ||| ||| |||||||||||| |||| ||||||||| | || || || ||||| || |
|
|
| T |
16685885 |
aaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaatggatcattaggtctgatcttgtcatttgcggttccgtggttttgtc |
16685984 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagataga |
267 |
Q |
| |
|
|||||||||| ||||||||| ||||||||| |
|
|
| T |
16685985 |
atctgagtttaagaatgaaatctcagataga |
16686015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 284
Target Start/End: Original strand, 20863361 - 20863608
Alignment:
| Q |
37 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttgacaccag |
136 |
Q |
| |
|
|||||||||||||| ||| | ||||||| |||||||||||| || || ||| |||| |||| ||||| ||||| || || | ||||| || | || |
|
|
| T |
20863361 |
ctttggaaagaagacactgaatgtcttgcatggcttgaatcgaaagaaccgggatctattgtatatgtaaattttggcagtaccacagtcatgtctgtag |
20863460 |
T |
|
| Q |
137 |
aacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatc |
236 |
Q |
| |
|
|| || |||| || ||||| ||||| |||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||| || |||| || |
|
|
| T |
20863461 |
aaaaattgttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattggtggctcggtgattttttc |
20863560 |
T |
|
| Q |
237 |
atctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||| || ||||| |
|
|
| T |
20863561 |
atctgcgtttgtgaatgaaatttcagatagaggcctaatcgcgagttg |
20863608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 284
Target Start/End: Complemental strand, 1281747 - 1281481
Alignment:
| Q |
18 |
ggattctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagc |
117 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
1281747 |
ggattctttagattccaacctttggaaagaagatatcgagtgtcttcaatggcttgaatcgaaggaaccgagatctgttgtttatgtgaatttcggaagc |
1281648 |
T |
|
| Q |
118 |
attacagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattg |
217 |
Q |
| |
|
||||||||| |||| ||||| ||||| ||||||||||||||| |||| ||| ||| ||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
1281647 |
attacagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattg |
1281548 |
T |
|
| Q |
218 |
gtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
| |||||||| |||| |||||||| |||| |||||||||||||||||||||| |||| |||||||| |
|
|
| T |
1281547 |
gcggctcagtgattttgtcatctgactttgcgaatgaaatttcagatagaggcctaatagcaagttg |
1281481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 22 - 278
Target Start/End: Original strand, 4189 - 4445
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagcc-gagatccgttgtttatgtgaatttcggaagcatt |
120 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||| ||||||| ||||||||| || ||| || ||||||||||||||||| ||||||||| |
|
|
| T |
4189 |
tctttaggttccaatctttggaaagaagataccaagtgtcttgagtggcttgcatccaaggaacctgag-tcggttgtttatgtgaattttggaagcatt |
4287 |
T |
|
| Q |
121 |
acagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtg |
220 |
Q |
| |
|
|||||| |||| ||||| |||||||| || |||||||||| ||| |||||| || ||| | ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4288 |
acagttatgactccagatcaactgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattggcg |
4387 |
T |
|
| Q |
221 |
gctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgc |
278 |
Q |
| |
|
|||| | |||| ||||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
4388 |
gctcgtttattttgtcatctgagtttgagaatgaaatttcagatagaggcctaattgc |
4445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 24 - 275
Target Start/End: Original strand, 3224 - 3475
Alignment:
| Q |
24 |
tttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagcc-gagatccgttgtttatgtgaatttcggaagcattac |
122 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||| || ||| || |||||||||||||||||||| |||||||| |
|
|
| T |
3224 |
tttaggttccaatctttggaaagaagataccaagtgtcttgaatggctcgaatccaaggaacctgag-tctgttgtttatgtgaatttcggcagcattac |
3322 |
T |
|
| Q |
123 |
agttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggc |
222 |
Q |
| |
|
|||| |||| ||| | |||||||| |||||||||||||| |||||| || ||| ||||| ||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
3323 |
agttatgactccaaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtggatcattaggcctgatcttgtcattggcggc |
3422 |
T |
|
| Q |
223 |
tcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggcttaat |
275 |
Q |
| |
|
|| | |||| ||||| || |||| |||||||||||||||||||||| |||| |
|
|
| T |
3423 |
tcgtttattttgtcatcagaatttgagaatgaaatttcagatagaggcctaat |
3475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 22 - 269
Target Start/End: Complemental strand, 3087049 - 3086802
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagcc-gagatccgttgtttatgtgaatttcggaagcatt |
120 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||| | ||| || ||||||||||||| ||| || |||||| |
|
|
| T |
3087049 |
tctttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatcaaagggacttgag-tctgttgtttatgtgagttttggcagcatt |
3086951 |
T |
|
| Q |
121 |
acagttttgacaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtg |
220 |
Q |
| |
|
|||||| |||| | ||| ||||| || || ||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| | |
|
|
| T |
3086950 |
acagttatgactcaagagcaactattagagtttgcttggggtttggccaatagcaagaaaccatttttgtggatcattaggcctgatcttgtcattggcg |
3086851 |
T |
|
| Q |
221 |
gctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagagg |
269 |
Q |
| |
|
|||| | || | ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
3086850 |
gctcctttattatgtcatctgagtttgagaaagaaatttcagatagagg |
3086802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 30 - 284
Target Start/End: Complemental strand, 24103620 - 24103366
Alignment:
| Q |
30 |
ttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcggaagcattacagttttg |
129 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||| ||||||||||| || || || ||||| ||||||||||| ||||| || ||||| |||||| || |
|
|
| T |
24103620 |
ttccaatctttggaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgtaaattttggtagcatcacagttatg |
24103521 |
T |
|
| Q |
130 |
acaccagaacaactgttggaatttgcttgggggttggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcg |
229 |
Q |
| |
|
||| ||| | || || || ||||||||||| ||||||||| ||| || || ||||||||||| ||||||||||| ||||||||||| |||||||| | |
|
|
| T |
24103520 |
tcacgagagaagctcttagagtttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattgggggctcagttg |
24103421 |
T |
|
| Q |
230 |
ttttatcatctgagtttgtgaatgaaatttcagatagaggcttaattgcaagttg |
284 |
Q |
| |
|
|||| |||||||| ||| | || ||| ||||||||||||| |||| |||||||| |
|
|
| T |
24103420 |
ttttgtcatctgatttttttaaagaagtttcagatagaggactaatagcaagttg |
24103366 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 275
Target Start/End: Original strand, 27999745 - 27999855
Alignment:
| Q |
165 |
ggccaattacaataaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagat |
264 |
Q |
| |
|
|||||||| ||| ||||| ||||||||||||| ||||||| | |||||||||||||||||||| ||||| |||||||||||| ||| |||||||||||| |
|
|
| T |
27999745 |
ggccaattgcaagaaaccttttttgtggatcactaggcctaatcttgtcattggtggctcagtggttttgtcatctgagtttaggaaagaaatttcagat |
27999844 |
T |
|
| Q |
265 |
agaggcttaat |
275 |
Q |
| |
|
|||||| |||| |
|
|
| T |
27999845 |
agaggcctaat |
27999855 |
T |
|
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Target: scaffold0199 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 92 - 1
Alignment:
| Q |
22 |
tctttaggttccaacctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgagatccgttgtttatgtgaatttcgg |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||| |||| |||||||||||||||||||| |
|
|
| T |
92 |
tctttaggttccaacctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaatttcgg |
1 |
T |
|
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Target: scaffold0475 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 270
Target Start/End: Original strand, 3168 - 3260
Alignment:
| Q |
178 |
aaaccatttttgtggatcattaggcctgaccttgtcattggtggctcagtcgttttatcatctgagtttgtgaatgaaatttcagatagaggc |
270 |
Q |
| |
|
||||| ||| |||||||||||||| |||||||||||||||| || ||| | ||| | || |||||||| |||||||| ||||||||||||| |
|
|
| T |
3168 |
aaaccctttgtgtggatcattaggtctgaccttgtcattggcggatcatgtgctttgttatatgagtttgagaatgaaacttcagatagaggc |
3260 |
T |
|
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