View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8091_low_44 (Length: 247)

Name: NF8091_low_44
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8091_low_44
NF8091_low_44
[»] chr7 (70 HSPs)
chr7 (13-231)||(12465207-12465425)
chr7 (13-231)||(13147419-13147637)
chr7 (13-231)||(32433536-32433754)
chr7 (13-231)||(8851106-8851324)
chr7 (13-231)||(11067355-11067573)
chr7 (13-231)||(12372161-12372379)
chr7 (13-231)||(12322877-12323095)
chr7 (13-231)||(16999320-16999541)
chr7 (27-224)||(12127124-12127321)
chr7 (13-231)||(46386039-46386253)
chr7 (65-231)||(20620173-20620339)
chr7 (66-231)||(14180398-14180563)
chr7 (61-231)||(20214034-20214204)
chr7 (66-231)||(20586239-20586404)
chr7 (70-231)||(10277215-10277375)
chr7 (66-231)||(24269947-24270112)
chr7 (16-190)||(47974770-47974944)
chr7 (13-118)||(43276691-43276796)
chr7 (27-128)||(44374833-44374934)
chr7 (27-128)||(44383698-44383799)
chr7 (13-118)||(19283056-19283161)
chr7 (13-112)||(18074594-18074693)
chr7 (13-170)||(12754560-12754716)
chr7 (66-178)||(14218895-14219008)
chr7 (66-188)||(8135238-8135359)
chr7 (66-188)||(15095637-15095759)
chr7 (66-188)||(15140143-15140265)
chr7 (66-188)||(48807325-48807448)
chr7 (60-224)||(33002055-33002211)
chr7 (13-118)||(32160147-32160252)
chr7 (66-178)||(35771441-35771554)
chr7 (13-118)||(19195611-19195718)
chr7 (13-96)||(58360-58443)
chr7 (13-96)||(14160803-14160886)
chr7 (65-195)||(25943041-25943171)
chr7 (66-187)||(15623950-15624070)
chr7 (66-178)||(4071759-4071872)
chr7 (66-166)||(16078281-16078382)
chr7 (66-188)||(13698638-13698761)
chr7 (53-118)||(4690650-4690715)
chr7 (66-186)||(12557853-12557973)
chr7 (108-188)||(13132363-13132443)
chr7 (13-114)||(8488041-8488142)
chr7 (63-136)||(13744655-13744728)
chr7 (27-118)||(38299748-38299841)
chr7 (13-114)||(8513700-8513801)
chr7 (66-147)||(10658851-10658932)
chr7 (66-170)||(15289052-15289157)
chr7 (66-118)||(18955330-18955382)
chr7 (61-167)||(36704566-36704673)
chr7 (13-78)||(16214514-16214579)
chr7 (66-118)||(3287744-3287796)
chr7 (66-188)||(11054642-11054765)
chr7 (27-96)||(13744469-13744540)
chr7 (66-118)||(18990847-18990899)
chr7 (27-96)||(25943289-25943360)
chr7 (66-118)||(29052182-29052234)
chr7 (106-186)||(41284963-41285043)
chr7 (35-118)||(13315049-13315134)
chr7 (27-84)||(14156353-14156410)
chr7 (53-118)||(43745656-43745721)
chr7 (66-118)||(16250222-16250274)
chr7 (66-118)||(16550005-16550057)
chr7 (66-118)||(16615605-16615657)
chr7 (66-118)||(18874665-18874717)
chr7 (13-96)||(15119254-15119337)
chr7 (188-231)||(25942358-25942401)
chr7 (108-174)||(36685187-36685253)
chr7 (66-118)||(20252182-20252234)
chr7 (27-96)||(37539470-37539541)
[»] chr6 (39 HSPs)
chr6 (13-231)||(19655178-19655396)
chr6 (13-231)||(7827859-7828077)
chr6 (13-231)||(23150234-23150452)
chr6 (17-231)||(27125428-27125642)
chr6 (13-231)||(18703451-18703673)
chr6 (13-231)||(18709386-18709608)
chr6 (66-231)||(15890712-15890877)
chr6 (66-216)||(27329981-27330131)
chr6 (66-216)||(27390721-27390871)
chr6 (67-166)||(24267801-24267900)
chr6 (66-221)||(19235021-19235175)
chr6 (66-224)||(28948468-28948627)
chr6 (69-190)||(18585733-18585854)
chr6 (66-184)||(18928614-18928733)
chr6 (13-118)||(20410459-20410564)
chr6 (13-84)||(17318113-17318184)
chr6 (66-221)||(30673402-30673550)
chr6 (155-221)||(19167926-19167992)
chr6 (65-184)||(19401028-19401147)
chr6 (65-132)||(27572121-27572188)
chr6 (66-118)||(15998889-15998941)
chr6 (27-118)||(19825447-19825538)
chr6 (66-170)||(31731904-31732009)
chr6 (66-188)||(23501601-23501724)
chr6 (66-118)||(12041620-12041672)
chr6 (16-96)||(31734729-31734809)
chr6 (66-169)||(24550168-24550271)
chr6 (27-86)||(25922033-25922092)
chr6 (39-96)||(23431420-23431477)
chr6 (66-118)||(15900654-15900706)
chr6 (156-221)||(18259262-18259328)
chr6 (66-136)||(19167853-19167923)
chr6 (27-96)||(10446239-10446310)
chr6 (66-118)||(15173453-15173505)
chr6 (70-110)||(29625191-29625231)
chr6 (55-118)||(29045271-29045334)
chr6 (27-118)||(13285748-13285841)
chr6 (53-118)||(21683062-21683127)
chr6 (61-118)||(23658089-23658146)
[»] chr2 (45 HSPs)
chr2 (13-234)||(5031076-5031297)
chr2 (13-231)||(24780787-24781005)
chr2 (13-231)||(24436535-24436753)
chr2 (13-231)||(9975816-9976034)
chr2 (13-218)||(22251395-22251600)
chr2 (27-231)||(17307373-17307577)
chr2 (13-231)||(2523694-2523912)
chr2 (66-231)||(24516073-24516238)
chr2 (66-231)||(40912207-40912372)
chr2 (53-231)||(19201187-19201365)
chr2 (70-231)||(37270587-37270747)
chr2 (103-231)||(27484514-27484642)
chr2 (13-180)||(27852605-27852769)
chr2 (114-231)||(36841151-36841268)
chr2 (66-188)||(25142133-25142256)
chr2 (68-190)||(1383545-1383667)
chr2 (39-190)||(22501897-22502050)
chr2 (39-190)||(22509831-22509984)
chr2 (66-190)||(357809-357933)
chr2 (13-118)||(21369293-21369398)
chr2 (66-188)||(3539766-3539889)
chr2 (13-79)||(36841266-36841332)
chr2 (13-90)||(31521197-31521274)
chr2 (13-96)||(14179675-14179758)
chr2 (66-166)||(44072509-44072609)
chr2 (39-114)||(149474-149549)
chr2 (14-96)||(14183414-14183496)
chr2 (81-178)||(18390229-18390326)
chr2 (66-183)||(22259974-22260090)
chr2 (66-169)||(25046066-25046170)
chr2 (13-99)||(20916326-20916412)
chr2 (66-169)||(5986125-5986229)
chr2 (66-118)||(25184189-25184241)
chr2 (61-167)||(14694276-14694383)
chr2 (66-188)||(19358820-19358943)
chr2 (66-118)||(21080969-21081021)
chr2 (13-57)||(24718080-24718124)
chr2 (66-188)||(18388190-18388312)
chr2 (139-189)||(24884399-24884449)
chr2 (39-118)||(12626399-12626478)
chr2 (70-118)||(21915624-21915672)
chr2 (55-96)||(23801518-23801559)
chr2 (74-118)||(18357975-18358019)
chr2 (66-118)||(21315476-21315528)
chr2 (66-118)||(21335266-21335318)
[»] scaffold0737 (2 HSPs)
scaffold0737 (13-231)||(4661-4879)
scaffold0737 (70-118)||(5821-5869)
[»] chr4 (45 HSPs)
chr4 (13-231)||(25091540-25091758)
chr4 (14-231)||(53630422-53630639)
chr4 (13-231)||(10356383-10356601)
chr4 (13-231)||(19610211-19610429)
chr4 (13-231)||(42875684-42875902)
chr4 (13-231)||(16998412-16998630)
chr4 (44-236)||(11425825-11426017)
chr4 (66-231)||(15115109-15115274)
chr4 (66-224)||(37019564-37019722)
chr4 (70-231)||(46001535-46001695)
chr4 (70-231)||(6633541-6633701)
chr4 (13-118)||(10694192-10694297)
chr4 (13-118)||(10907958-10908063)
chr4 (66-186)||(9924085-9924206)
chr4 (13-118)||(12424237-12424342)
chr4 (66-183)||(14549695-14549812)
chr4 (13-118)||(25513851-25513956)
chr4 (13-96)||(19022366-19022449)
chr4 (13-118)||(9639010-9639115)
chr4 (66-184)||(11478653-11478772)
chr4 (13-96)||(40230328-40230411)
chr4 (66-179)||(19434559-19434672)
chr4 (66-169)||(21144-21248)
chr4 (66-188)||(9870444-9870568)
chr4 (35-118)||(33186903-33186986)
chr4 (153-219)||(26921708-26921774)
chr4 (53-118)||(2424374-2424439)
chr4 (66-147)||(15613061-15613142)
chr4 (66-147)||(51993532-51993613)
chr4 (13-96)||(44023554-44023633)
chr4 (39-96)||(33243267-33243324)
chr4 (65-118)||(35811375-35811428)
chr4 (66-122)||(14186955-14187010)
chr4 (66-118)||(15008963-15009015)
chr4 (66-116)||(32466194-32466244)
chr4 (66-103)||(21062656-21062693)
chr4 (27-96)||(10273405-10273476)
chr4 (66-118)||(14631135-14631187)
chr4 (66-118)||(16296938-16296990)
chr4 (66-118)||(40620532-40620584)
chr4 (156-221)||(27028642-27028708)
chr4 (155-188)||(9638939-9638972)
chr4 (66-114)||(13847205-13847253)
chr4 (66-118)||(15239816-15239868)
chr4 (27-96)||(55583218-55583289)
[»] chr1 (39 HSPs)
chr1 (13-231)||(19676598-19676816)
chr1 (13-231)||(21045996-21046214)
chr1 (13-231)||(20633578-20633799)
chr1 (39-231)||(16058287-16058478)
chr1 (66-231)||(42912936-42913101)
chr1 (66-224)||(51324398-51324556)
chr1 (66-170)||(13302849-13302954)
chr1 (66-190)||(24723351-24723475)
chr1 (15-118)||(28476683-28476786)
chr1 (66-190)||(7051922-7052046)
chr1 (66-221)||(21168831-21168985)
chr1 (13-96)||(41225401-41225484)
chr1 (13-96)||(41226654-41226737)
chr1 (14-188)||(22350646-22350815)
chr1 (13-118)||(12710867-12710972)
chr1 (66-169)||(42697732-42697836)
chr1 (13-96)||(20588660-20588743)
chr1 (13-96)||(20593198-20593281)
chr1 (66-215)||(4595853-4595995)
chr1 (66-188)||(7320594-7320716)
chr1 (66-118)||(12327743-12327795)
chr1 (66-118)||(51336479-51336531)
chr1 (27-114)||(8306610-8306697)
chr1 (66-147)||(21239049-21239130)
chr1 (66-169)||(45755468-45755572)
chr1 (139-190)||(44822094-44822145)
chr1 (27-118)||(17901754-17901846)
chr1 (63-136)||(45499374-45499446)
chr1 (66-118)||(29763632-29763684)
chr1 (66-118)||(46197745-46197797)
chr1 (27-118)||(6834176-6834268)
chr1 (66-114)||(635004-635052)
chr1 (27-96)||(34392790-34392861)
chr1 (27-96)||(45499564-45499634)
chr1 (66-118)||(50001476-50001528)
chr1 (66-118)||(50544872-50544924)
chr1 (155-188)||(8276079-8276112)
chr1 (65-118)||(22145665-22145718)
chr1 (155-188)||(38056762-38056795)
[»] scaffold0001 (3 HSPs)
scaffold0001 (13-231)||(31881-32099)
scaffold0001 (13-231)||(37188-37406)
scaffold0001 (14-231)||(77574-77791)
[»] chr3 (62 HSPs)
chr3 (13-231)||(17044853-17045071)
chr3 (13-229)||(22306530-22306746)
chr3 (13-231)||(11259318-11259536)
chr3 (13-231)||(17047013-17047231)
chr3 (13-231)||(17538993-17539211)
chr3 (13-231)||(17693954-17694172)
chr3 (13-229)||(41172318-41172534)
chr3 (30-240)||(49900608-49900818)
chr3 (39-231)||(17518846-17519038)
chr3 (39-231)||(17533708-17533900)
chr3 (13-231)||(35354489-35354707)
chr3 (16-231)||(40812720-40812931)
chr3 (66-231)||(40807883-40808048)
chr3 (13-231)||(15931455-15931672)
chr3 (13-215)||(14508749-14508952)
chr3 (66-231)||(44274305-44274470)
chr3 (81-231)||(50348041-50348191)
chr3 (70-231)||(10311415-10311575)
chr3 (66-231)||(10563596-10563760)
chr3 (13-129)||(17541423-17541539)
chr3 (51-188)||(11563654-11563792)
chr3 (66-224)||(19568208-19568366)
chr3 (91-183)||(35064566-35064658)
chr3 (66-212)||(9510916-9511062)
chr3 (66-212)||(9518891-9519037)
chr3 (66-186)||(33565018-33565139)
chr3 (16-188)||(45530553-45530725)
chr3 (66-170)||(16050875-16050979)
chr3 (66-188)||(42323971-42324094)
chr3 (66-186)||(35960928-35961049)
chr3 (39-118)||(15566744-15566823)
chr3 (167-231)||(35064681-35064745)
chr3 (173-231)||(5200277-5200335)
chr3 (66-178)||(13185834-13185947)
chr3 (65-188)||(49968858-49968981)
chr3 (35-87)||(50347604-50347656)
chr3 (13-96)||(50350763-50350846)
chr3 (13-118)||(14152346-14152451)
chr3 (13-73)||(17325568-17325628)
chr3 (66-170)||(24177736-24177840)
chr3 (69-167)||(11885560-11885658)
chr3 (83-188)||(37038978-37039085)
chr3 (39-96)||(6159427-6159484)
chr3 (66-118)||(15446868-15446920)
chr3 (27-114)||(14641509-14641596)
chr3 (66-147)||(12509350-12509431)
chr3 (66-107)||(5200243-5200284)
chr3 (39-96)||(53646032-53646089)
chr3 (66-134)||(36528851-36528919)
chr3 (65-118)||(22652773-22652826)
chr3 (67-167)||(22758835-22758935)
chr3 (27-96)||(12917265-12917336)
chr3 (69-169)||(14250085-14250185)
chr3 (66-118)||(16979912-16979964)
chr3 (66-118)||(17208524-17208576)
chr3 (28-96)||(3527117-3527187)
chr3 (39-90)||(6820192-6820243)
chr3 (55-118)||(29907639-29907702)
chr3 (55-118)||(29948805-29948868)
chr3 (55-118)||(29997959-29998022)
chr3 (56-132)||(6804882-6804957)
chr3 (141-188)||(22146832-22146880)
[»] chr8 (56 HSPs)
chr8 (13-227)||(19140656-19140869)
chr8 (13-231)||(42817854-42818072)
chr8 (13-231)||(39935954-39936175)
chr8 (66-240)||(20083638-20083812)
chr8 (53-231)||(5761421-5761598)
chr8 (70-231)||(6573060-6573221)
chr8 (80-231)||(5082226-5082377)
chr8 (70-231)||(6202664-6202824)
chr8 (66-231)||(6101753-6101918)
chr8 (70-231)||(37292593-37292753)
chr8 (13-118)||(18761448-18761553)
chr8 (66-220)||(20397510-20397656)
chr8 (130-240)||(20178593-20178704)
chr8 (13-113)||(22258253-22258353)
chr8 (13-96)||(36306019-36306102)
chr8 (66-224)||(22532132-22532290)
chr8 (66-224)||(22536817-22536975)
chr8 (13-96)||(21579153-21579236)
chr8 (66-188)||(45469219-45469342)
chr8 (51-188)||(20022025-20022155)
chr8 (13-106)||(23943773-23943866)
chr8 (66-234)||(31722493-31722661)
chr8 (17-96)||(29762819-29762898)
chr8 (66-178)||(36727038-36727151)
chr8 (14-96)||(18834444-18834526)
chr8 (70-224)||(39694281-39694435)
chr8 (66-170)||(17906849-17906953)
chr8 (66-188)||(22317911-22318033)
chr8 (53-118)||(4380604-4380669)
chr8 (27-118)||(22208269-22208360)
chr8 (66-178)||(23899987-23900100)
chr8 (66-133)||(23889784-23889851)
chr8 (27-86)||(12037125-12037184)
chr8 (66-169)||(19700109-19700213)
chr8 (66-169)||(23948211-23948315)
chr8 (66-133)||(22583660-22583727)
chr8 (65-136)||(36305837-36305908)
chr8 (66-116)||(23419443-23419493)
chr8 (66-118)||(22254766-22254818)
chr8 (27-96)||(22345186-22345257)
chr8 (27-96)||(22356846-22356917)
chr8 (66-118)||(26454708-26454760)
chr8 (116-188)||(42265559-42265631)
chr8 (65-170)||(17218649-17218755)
chr8 (66-103)||(17158963-17159000)
chr8 (53-114)||(21514695-21514756)
chr8 (66-103)||(23479097-23479134)
chr8 (53-118)||(36732399-36732464)
chr8 (66-102)||(19880838-19880874)
chr8 (70-110)||(34758875-34758915)
chr8 (27-95)||(23884192-23884262)
chr8 (27-114)||(22610226-22610315)
chr8 (116-188)||(3273819-3273892)
chr8 (66-118)||(12577880-12577931)
chr8 (27-96)||(20879494-20879565)
chr8 (70-118)||(25657518-25657566)
[»] scaffold0064 (1 HSPs)
scaffold0064 (13-231)||(58633-58851)
[»] scaffold1283 (1 HSPs)
scaffold1283 (14-231)||(416-633)
[»] scaffold0407 (1 HSPs)
scaffold0407 (13-231)||(11222-11439)
[»] scaffold1633 (1 HSPs)
scaffold1633 (13-231)||(1092-1310)
[»] scaffold0080 (2 HSPs)
scaffold0080 (13-231)||(21740-21958)
scaffold0080 (13-59)||(58834-58880)
[»] scaffold0077 (2 HSPs)
scaffold0077 (13-231)||(34226-34444)
scaffold0077 (66-147)||(5921-6002)
[»] scaffold0111 (2 HSPs)
scaffold0111 (39-224)||(12506-12691)
scaffold0111 (69-231)||(5270-5432)
[»] scaffold1941 (1 HSPs)
scaffold1941 (66-231)||(25-190)
[»] chr5 (30 HSPs)
chr5 (39-231)||(21300017-21300209)
chr5 (30-231)||(19921525-19921732)
chr5 (70-231)||(7484890-7485050)
chr5 (66-224)||(20566448-20566598)
chr5 (57-215)||(31622028-31622178)
chr5 (61-190)||(36508628-36508757)
chr5 (13-118)||(23199154-23199259)
chr5 (13-96)||(21398591-21398674)
chr5 (66-190)||(31456888-31457012)
chr5 (66-184)||(21617928-21618047)
chr5 (66-118)||(6551290-6551342)
chr5 (53-189)||(17876132-17876268)
chr5 (66-170)||(20469176-20469281)
chr5 (65-184)||(22111762-22111881)
chr5 (66-188)||(21405628-21405751)
chr5 (66-169)||(10954038-10954141)
chr5 (52-118)||(30616614-30616680)
chr5 (30-96)||(32607280-32607346)
chr5 (65-118)||(266038-266091)
chr5 (66-174)||(10774664-10774771)
chr5 (65-186)||(31251891-31252011)
chr5 (66-118)||(17011728-17011780)
chr5 (16-96)||(26762424-26762504)
chr5 (170-219)||(22111715-22111764)
chr5 (35-91)||(8503857-8503913)
chr5 (66-118)||(18744874-18744926)
chr5 (66-118)||(29448840-29448892)
chr5 (151-190)||(30138059-30138098)
chr5 (66-147)||(25249828-25249910)
chr5 (66-147)||(25313612-25313694)
[»] scaffold0334 (1 HSPs)
scaffold0334 (66-231)||(405-570)
[»] scaffold0241 (2 HSPs)
scaffold0241 (66-231)||(3069-3234)
scaffold0241 (124-231)||(2451-2558)
[»] scaffold0019 (1 HSPs)
scaffold0019 (13-170)||(24078-24235)
[»] scaffold0036 (1 HSPs)
scaffold0036 (13-179)||(78132-78298)
[»] scaffold1766 (1 HSPs)
scaffold1766 (66-231)||(696-861)
[»] scaffold0207 (1 HSPs)
scaffold0207 (66-231)||(13392-13557)
[»] scaffold0020 (3 HSPs)
scaffold0020 (66-231)||(168999-169164)
scaffold0020 (62-231)||(143498-143667)
scaffold0020 (13-96)||(174243-174326)
[»] scaffold0632 (1 HSPs)
scaffold0632 (66-231)||(1052-1217)
[»] scaffold0026 (2 HSPs)
scaffold0026 (66-231)||(146610-146775)
scaffold0026 (56-132)||(22163-22238)
[»] scaffold0047 (1 HSPs)
scaffold0047 (16-224)||(78958-79151)
[»] scaffold0004 (5 HSPs)
scaffold0004 (53-231)||(328275-328455)
scaffold0004 (65-219)||(75691-75839)
scaffold0004 (65-221)||(72841-72989)
scaffold0004 (65-170)||(110121-110227)
scaffold0004 (27-114)||(73091-73180)
[»] scaffold0149 (2 HSPs)
scaffold0149 (66-205)||(29573-29711)
scaffold0149 (66-190)||(21539-21663)
[»] scaffold0956 (2 HSPs)
scaffold0956 (13-149)||(2524-2660)
scaffold0956 (56-90)||(2084-2118)
[»] scaffold0113 (1 HSPs)
scaffold0113 (66-192)||(35418-35542)
[»] scaffold0285 (1 HSPs)
scaffold0285 (66-224)||(19655-19805)
[»] scaffold0213 (1 HSPs)
scaffold0213 (13-118)||(19207-19312)
[»] scaffold0431 (1 HSPs)
scaffold0431 (13-118)||(5633-5738)
[»] scaffold0037 (3 HSPs)
scaffold0037 (66-224)||(112966-113125)
scaffold0037 (65-184)||(81501-81620)
scaffold0037 (66-224)||(117807-117958)
[»] scaffold0162 (1 HSPs)
scaffold0162 (13-96)||(23839-23922)
[»] scaffold0032 (1 HSPs)
scaffold0032 (39-118)||(61821-61900)
[»] scaffold0112 (1 HSPs)
scaffold0112 (66-221)||(2793-2941)
[»] scaffold0230 (1 HSPs)
scaffold0230 (69-190)||(6688-6809)
[»] scaffold0628 (1 HSPs)
scaffold0628 (51-234)||(1043-1226)
[»] scaffold0203 (1 HSPs)
scaffold0203 (39-118)||(17913-17992)
[»] scaffold0083 (3 HSPs)
scaffold0083 (66-224)||(10755-10911)
scaffold0083 (66-118)||(5045-5097)
scaffold0083 (66-118)||(1937-1989)
[»] scaffold0174 (6 HSPs)
scaffold0174 (70-221)||(5167-5310)
scaffold0174 (70-221)||(11287-11430)
scaffold0174 (65-220)||(19605-19759)
scaffold0174 (27-118)||(5454-5545)
scaffold0174 (27-118)||(11616-11707)
scaffold0174 (27-96)||(19878-19947)
[»] scaffold0156 (1 HSPs)
scaffold0156 (72-190)||(16532-16650)
[»] scaffold0853 (1 HSPs)
scaffold0853 (13-118)||(2402-2506)
[»] scaffold0802 (1 HSPs)
scaffold0802 (66-186)||(4709-4830)
[»] scaffold0040 (1 HSPs)
scaffold0040 (66-190)||(106051-106175)
[»] scaffold0100 (1 HSPs)
scaffold0100 (70-217)||(26638-26779)
[»] scaffold0008 (1 HSPs)
scaffold0008 (66-187)||(135504-135625)
[»] scaffold0107 (1 HSPs)
scaffold0107 (13-86)||(13499-13572)
[»] scaffold0379 (2 HSPs)
scaffold0379 (65-183)||(10741-10851)
scaffold0379 (13-96)||(10969-11052)
[»] scaffold0175 (2 HSPs)
scaffold0175 (66-188)||(8571-8694)
scaffold0175 (156-221)||(18744-18810)
[»] scaffold0075 (1 HSPs)
scaffold0075 (66-169)||(60843-60947)
[»] scaffold0028 (1 HSPs)
scaffold0028 (67-188)||(3053-3174)
[»] scaffold0848 (1 HSPs)
scaffold0848 (65-188)||(2020-2143)
[»] scaffold0123 (1 HSPs)
scaffold0123 (66-188)||(7205-7329)
[»] scaffold0251 (1 HSPs)
scaffold0251 (66-183)||(20086-20202)
[»] scaffold1256 (1 HSPs)
scaffold1256 (53-118)||(2187-2252)
[»] scaffold0056 (2 HSPs)
scaffold0056 (66-178)||(67060-67173)
scaffold0056 (53-118)||(18275-18340)
[»] scaffold0414 (1 HSPs)
scaffold0414 (13-96)||(11107-11190)
[»] scaffold0125 (1 HSPs)
scaffold0125 (19-86)||(28583-28650)
[»] scaffold0010 (1 HSPs)
scaffold0010 (66-169)||(126305-126407)
[»] scaffold0261 (1 HSPs)
scaffold0261 (153-219)||(6620-6686)
[»] scaffold0256 (1 HSPs)
scaffold0256 (74-136)||(1855-1917)
[»] scaffold0220 (2 HSPs)
scaffold0220 (66-167)||(19905-20006)
scaffold0220 (155-188)||(13878-13911)
[»] scaffold0516 (1 HSPs)
scaffold0516 (53-114)||(5292-5353)
[»] scaffold0328 (2 HSPs)
scaffold0328 (39-96)||(18613-18670)
scaffold0328 (155-188)||(18731-18764)
[»] scaffold0041 (1 HSPs)
scaffold0041 (71-120)||(5712-5761)
[»] scaffold0071 (1 HSPs)
scaffold0071 (66-118)||(15272-15324)
[»] scaffold0676 (1 HSPs)
scaffold0676 (39-118)||(2881-2960)
[»] scaffold0061 (2 HSPs)
scaffold0061 (27-118)||(14546-14638)
scaffold0061 (27-118)||(23604-23696)
[»] scaffold0395 (1 HSPs)
scaffold0395 (13-86)||(11921-11994)
[»] scaffold0671 (1 HSPs)
scaffold0671 (66-169)||(4888-4992)
[»] scaffold0589 (1 HSPs)
scaffold0589 (66-169)||(4333-4437)
[»] scaffold0439 (1 HSPs)
scaffold0439 (110-189)||(12323-12403)
[»] scaffold0002 (1 HSPs)
scaffold0002 (66-169)||(398510-398614)
[»] scaffold0859 (1 HSPs)
scaffold0859 (81-188)||(4612-4718)
[»] scaffold0371 (2 HSPs)
scaffold0371 (13-96)||(10393-10476)
scaffold0371 (13-91)||(3901-3979)
[»] scaffold0003 (1 HSPs)
scaffold0003 (70-169)||(96347-96446)
[»] scaffold0074 (1 HSPs)
scaffold0074 (13-99)||(1957-2043)
[»] scaffold0819 (1 HSPs)
scaffold0819 (66-174)||(5311-5418)
[»] scaffold0625 (1 HSPs)
scaffold0625 (66-118)||(5861-5913)
[»] scaffold0577 (1 HSPs)
scaffold0577 (66-174)||(9004-9111)
[»] scaffold0515 (1 HSPs)
scaffold0515 (66-118)||(5029-5081)
[»] scaffold0436 (1 HSPs)
scaffold0436 (66-118)||(8960-9012)
[»] scaffold0306 (1 HSPs)
scaffold0306 (66-118)||(5029-5081)
[»] scaffold0138 (2 HSPs)
scaffold0138 (66-118)||(21097-21149)
scaffold0138 (66-118)||(34112-34164)
[»] scaffold0065 (1 HSPs)
scaffold0065 (66-169)||(52544-52648)
[»] scaffold0057 (1 HSPs)
scaffold0057 (66-118)||(69853-69905)
[»] scaffold0042 (1 HSPs)
scaffold0042 (66-165)||(29340-29440)
[»] scaffold0031 (1 HSPs)
scaffold0031 (27-96)||(127302-127373)
[»] scaffold0007 (2 HSPs)
scaffold0007 (66-193)||(158822-158949)
scaffold0007 (66-118)||(16419-16471)
[»] scaffold0070 (1 HSPs)
scaffold0070 (39-78)||(11193-11232)
[»] scaffold0601 (1 HSPs)
scaffold0601 (65-103)||(195-233)
[»] scaffold0878 (1 HSPs)
scaffold0878 (28-118)||(3383-3474)
[»] scaffold0555 (1 HSPs)
scaffold0555 (51-96)||(8731-8776)
[»] scaffold0180 (1 HSPs)
scaffold0180 (56-188)||(28319-28451)
[»] scaffold0017 (1 HSPs)
scaffold0017 (69-118)||(26727-26776)
[»] scaffold1186 (1 HSPs)
scaffold1186 (66-118)||(2020-2072)
[»] scaffold0462 (1 HSPs)
scaffold0462 (66-118)||(11223-11275)
[»] scaffold0151 (1 HSPs)
scaffold0151 (66-181)||(31046-31160)
[»] scaffold0034 (1 HSPs)
scaffold0034 (66-118)||(29216-29268)
[»] scaffold0005 (1 HSPs)
scaffold0005 (66-118)||(186196-186248)
[»] scaffold0205 (1 HSPs)
scaffold0205 (67-165)||(30607-30705)
[»] scaffold0505 (1 HSPs)
scaffold0505 (55-96)||(4958-4999)
[»] scaffold0058 (1 HSPs)
scaffold0058 (70-103)||(6383-6416)
[»] scaffold0046 (1 HSPs)
scaffold0046 (66-103)||(21777-21814)
[»] scaffold0369 (1 HSPs)
scaffold0369 (27-88)||(15576-15638)
[»] scaffold0308 (1 HSPs)
scaffold0308 (116-188)||(13370-13442)
[»] scaffold0247 (1 HSPs)
scaffold0247 (66-118)||(1076-1128)
[»] scaffold0116 (1 HSPs)
scaffold0116 (116-188)||(35514-35586)
[»] scaffold0108 (1 HSPs)
scaffold0108 (66-118)||(6418-6470)


Alignment Details
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 12465207 - 12465425
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12465207 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 12465306  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12465307 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 12465406  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  12465407 atttgtgtagaattgatgt 12465425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 13147419 - 13147637
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||    
T  13147419 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataatt 13147518  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13147519 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccgttga 13147618  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||    
T  13147619 atttgtgtagaagtgatgt 13147637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 32433536 - 32433754
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32433536 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 32433635  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  32433636 ctgaaattgagtttagcatgttgtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaattagttga 32433735  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||    
T  32433736 atttgtgtagaagtgatgt 32433754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 8851106 - 8851324
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8851106 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 8851205  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  8851206 ctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgttaatagagtataaaatctgttga 8851305  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  8851306 atttgtgtagaattgatgt 8851324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 11067573 - 11067355
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11067573 gagaagaatattgtgagaagaggagcaatcttatagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 11067474  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||    
T  11067473 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgttaatagagtagaaaattcgttga 11067374  T
Q  213 atttgtgtagaagtgatgt 231  Q
    ||||||| |||||||||||    
T  11067373 atttgtggagaagtgatgt 11067355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 12372379 - 12372161
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  12372379 gagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 12372280  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12372279 ctgaaattgagtttagcatgttgcaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttga 12372180  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  12372179 atttgtgtagaattgatgt 12372161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 12322877 - 12323095
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  12322877 gagaagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtggaactaactttctctaattctaagttgtataatt 12322976  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  12322977 ctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgttaatagaatagaaaatccgttga 12323076  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  12323077 atttgtgtagaattgatgt 12323095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 16999541 - 16999320
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattc--taagttgtataa 110  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  16999541 gagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctataagttgtataa 16999442  T
Q  111 ttctgaaattgattttagcatgttgtatgttgtagttatgggaa-tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgt 209  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16999441 ttctgaaattgagtttagcatgttatatgttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgttaatagagtagaaaatccgt 16999342  T
Q  210 tgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||| ||||||    
T  16999341 tgaatttgtgtagaattgatgt 16999320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 27 - 224
Target Start/End: Original strand, 12127124 - 12127321
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgatttt 126  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  12127124 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 12127223  T
Q  127 agcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    | ||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  12127224 aacatgttgtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgttaagagagtagaaaattcgttgaatttgtgtagaa 12127321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 46386039 - 46386253
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||| |||||||||||||||||||||||||||||| || ||||||    || |||| |||||||  |||||||||||||||||||||||||||||||||    
T  46386039 gagaataatcttgtgagaagatgagcaatcttgtagtgttcgatca----atctaagataagggtaggactaactttctctaattctaagttgtataatt 46386134  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| ||||  |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46386135 ctgaaattgagtttaatatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaattccgttga 46386234  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  46386235 atttgtgtagaattgatgt 46386253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 65 - 231
Target Start/End: Complemental strand, 20620339 - 20620173
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||    
T  20620339 ttaaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaatt 20620240  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20620239 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20620173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 14180398 - 14180563
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||    
T  14180398 taaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaattgagtttagcatattgtaggttgtagttatgggaatttgggaatta 14180497  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  14180498 tgttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 14180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 61 - 231
Target Start/End: Complemental strand, 20214204 - 20214034
Alignment:
Q  61 taatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttggg 160  Q
    |||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  20214204 taatctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggg 20214105  T
Q  161 aattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  20214104 aattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtacaattgatgt 20214034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 20586404 - 20586239
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| || || ||    
T  20586404 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaccatgttgtaggttgtagttatgggaattaggaaacta 20586305  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20586304 gggtttgaagttgcaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 20586239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 10277375 - 10277215
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 10277276  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  10277275 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 10277215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 24269947 - 24270112
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| || ||||||||||||||| |||||||||||||||||||||||| |||||||||||||   ||||   | || ||| ||||||||||    
T  24269947 taaggtaagggtgggattaactttctctaattttaagttgtataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaagttgggaatta 24270046  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || ||||||    
T  24270047 ggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgtacaattgatgt 24270112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 47974770 - 47974944
Alignment:
Q  16 aagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg 115  Q
    |||||||||||||||||| ||||||| ||||||||| |||||   |||  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  47974770 aagaatcttgtgagaagaggagcaatattgtagagttcgatcgattaacctaaggtaagggtgagactaactttctctaattctaagttgtatgattctg 47974869  T
Q  116 aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 190  Q
    ||| ||  |||| || || ||| ||||||||| ||| ||||||||||||| |||| |||||||||||||||||||    
T  47974870 aaactggatttaacaggtggtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgtt 47974944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 43276691 - 43276796
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |  |||||||||||    
T  43276691 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaataatgggttgtataatt 43276790  T
Q  113 ctgaaa 118  Q
    ||||||    
T  43276791 ctgaaa 43276796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 44374934 - 44374833
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgatttt 126  Q
    ||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  44374934 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44374835  T
Q  127 ag 128  Q
    ||    
T  44374834 ag 44374833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 27 - 128
Target Start/End: Complemental strand, 44383799 - 44383698
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgatttt 126  Q
    ||||||| ||||||||| |||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  44383799 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaattgagttt 44383700  T
Q  127 ag 128  Q
    ||    
T  44383699 ag 44383698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 19283161 - 19283056
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |  |||||||||||    
T  19283161 gagaagaatcttgtgagaaaaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaagaatgggttgtataatt 19283062  T
Q  113 ctgaaa 118  Q
    ||||||    
T  19283061 ctgaaa 19283056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 112
Target Start/End: Original strand, 18074594 - 18074693
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||||||| ||||||||    
T  18074594 gagaagaatcttgtgagaagaagatcaatcttgtagagtccgaccatctaatttaaggtaagagtgggattaactttctctaattctaagtggtataatt 18074693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 12754560 - 12754716
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||   |||  ||||||||||||| ||||||||||||||||||||||||| ||| |||    
T  12754560 gagaagaatcttgtgagaagaggagcaatcttgtagagttc-atcgattaacctaaggtaagggtgggactaactttctctaattctaagttatatgatt 12754658  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttt 170  Q
    |||||| ||  |||| || || ||| |||||||| |||| ||||||||||||| ||||    
T  12754659 ctgaaactggatttaacaggtggtaggttgtagtaatggaaatttgggaattatgttt 12754716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 14218895 - 14219008
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||| ||||||||| || |||||| ||||||    
T  14218895 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgagaattttggaatt 14218994  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  14218995 aggtttagaagttg 14219008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 8135238 - 8135359
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||| ||| ||||| |||||| |||| ||||||||||||| |||| || |||||| ||||||||| | |||||||| ||||||    
T  8135238 taaggtaagggtgagactaaccttcactaatcctaagt-gtatgattctgaaattgaatttaacaggttgtaggttgtagttttaggaatttgagaatta 8135336  T
Q  166 ggttttgaagttgtaattggttg 188  Q
    ||||| |||||||||||||||||    
T  8135337 ggtttagaagttgtaattggttg 8135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 15095637 - 15095759
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||| ||||||||| ||||||||||||||||    
T  15095637 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15095735  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||| ||||    
T  15095736 aggtttagaagttgtaattagttg 15095759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 15140265 - 15140143
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||| ||||||||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||| ||||||||| ||||||||||||||||    
T  15140265 taaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 15140167  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    ||||||  ||||||||||||||||    
T  15140166 aggtttaaaagttgtaattggttg 15140143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 48807325 - 48807448
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || |||| || ||||||  |||||||| ||||||||||||||||    
T  48807325 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtagattgtagttttgggaatttgggaatt 48807424  T
Q  165 aggttttgaagttgtaattggttg 188  Q
     |||   |||||||||||||||||    
T  48807425 tggtacagaagttgtaattggttg 48807448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 224
Target Start/End: Complemental strand, 33002211 - 33002055
Alignment:
Q  60 ctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgg 159  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||  |||| || |||||| |||       |||||||||||    
T  33002211 ctaacttaaggtaagggtcggactaactttctctaattctaagttgtatgattctgaaattggatttaacaggttgta-gtt-------tgggaatttgg 33002120  T
Q  160 gaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||||| || |||||||||||||||||||   | |||||| |||| |||||||| ||||||||    
T  33002119 gaattagggttagaagttgtaattggttgttgtaatagtagagaatctgttgaattggtgtagaa 33002055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 32160147 - 32160252
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||   |||  |||||||||||| |||||||||||||||||||||||||  | |||||    
T  32160147 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtaagactaactttctctaattctaagtaatttaatt 32160246  T
Q  113 ctgaaa 118  Q
    ||||||    
T  32160247 ctgaaa 32160252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 35771441 - 35771554
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||||| |||| || |||| || |||||| ||||||||| ||| ||||||||||||    
T  35771441 taaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 35771540  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  35771541 aggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 19195718 - 19195611
Alignment:
Q  13 gagaagaatcttgtgagaa--gatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataa 110  Q
    ||||||||||||||||||   || || ||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||  | ||||||||||    
T  19195718 gagaagaatcttgtgagataggaggaacaatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaataatgagttgtataa 19195619  T
Q  111 ttctgaaa 118  Q
    ||||||||    
T  19195618 ttctgaaa 19195611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 58360 - 58443
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||    
T  58360 gagaagaatcttgtgagaagaggaacaatcttgtagattccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 14160803 - 14160886
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||||    
T  14160803 gagaagaatcttgtgtgaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaaccttctttaat 14160886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 195
Target Start/End: Complemental strand, 25943171 - 25943041
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| |||| |||| || ||||||||||||||| |  ||||||||||||||||||||| |||||||||||||   ||||   | || |||||||| ||||    
T  25943171 ttaatgtaacggtgggattaactttctctaattttgggttgtataattctgaaattgaatttagcatgttgttgtttgtgaatttgtgaatttggaaatt 25943072  T
Q  165 aggttttgaagttgtaattggttgttaatag 195  Q
    |||||||||||| ||||||||||||||||||    
T  25943071 aggttttgaagtcgtaattggttgttaatag 25943041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 187
Target Start/End: Complemental strand, 15624070 - 15623950
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||| |||  ||||||||||| |||| ||||||||||||| ||||  | ||||||  |||||||| |||||||||| ||||||    
T  15624070 taaggtaagggtgagactaaccttcaataattctaagt-gtatgattctgaaattgaatttaataggttgtagtttgtagttttgggaatttgagaatta 15623972  T
Q  166 ggttttgaagttgtaattggtt 187  Q
    ||||| | ||||||||||||||    
T  15623971 ggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 4071872 - 4071759
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||| ||||||||| |||| ||||| |||||    
T  4071872 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgagaatt 4071773  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  4071772 aggtttagaagttg 4071759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 16078382 - 16078281
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| || |||| || |||| || ||||||  |||||||| ||||||||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaacaagttgtagtttgtagttttgggaatttgggaatt 16078283  T
Q  165 ag 166  Q
    ||    
T  16078282 ag 16078281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 13698638 - 13698761
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||  |||||||||||| ||||| |||||||  ||||||||||| |||  |||  |||||| || ||||||||| ||| ||||||||||||    
T  13698638 taaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttggaaatttgggaatt 13698737  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    ||| || |||||||||||||||||    
T  13698738 agggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 4690650 - 4690715
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  4690650 cgatcatctaacctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 4690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 12557973 - 12557853
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| |||| ||||||||||| ||| |||||||||||| |||| ||||| ||| |||| |||| || |||||| ||||||||| ||||||||||| ||||    
T  12557973 taagataagagtgagactaaccttcactaattctaagt-gtatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttggaaatt 12557875  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| ||||||| |||||||    
T  12557874 aggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 188
Target Start/End: Original strand, 13132363 - 13132443
Alignment:
Q  108 taattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 188  Q
    ||||||||||||||| |||| || |||||| || |||||| |||||||||||||||||||||| ||||||||||| |||||    
T  13132363 taattctgaaattgaatttaacaagttgtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttg 13132443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 8488041 - 8488142
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| || |||||||||| ||| |||||   |||  ||||||||||||| |||||||||||||||||  |  |||||||||||    
T  8488041 gagaagaatcttgtgagaagaagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataatt 8488140  T
Q  113 ct 114  Q
    ||    
T  8488141 ct 8488142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 136
Target Start/End: Original strand, 13744655 - 13744728
Alignment:
Q  63 atttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 136  Q
    |||||| ||||||||| || ||||||||||||||| || ||||||||||||||||||| | |||||||||||||    
T  13744655 atttaacgtaagggtgggattaactttctctaattttaggttgtataattctgaaattaagtttagcatgttgt 13744728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 38299841 - 38299748
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| |||||| ||||||||||| ||  ||||||||| ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  38299841 gagaagaggagcaagcttgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 38299748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 8513700 - 8513801
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||| | || |||||||||| ||| |||||   |||  ||||||||||||| |||||||||||||||||  |  |||||||||||    
T  8513700 gagaagaatcttgtgagaataagaacaatcttgtaaagttcgatcgattaacctaaggtaagggtgggactaactttctctaataatgggttgtataatt 8513799  T
Q  113 ct 114  Q
    ||    
T  8513800 ct 8513801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 10658851 - 10658932
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||||||||| ||||||| |||| |||||||||||||||| ||||||||||||  |||| ||| ||||| | |||||||    
T  10658851 taaggtaagggtgggactaaccttctttaattctaagttgtatgattctgaaattggatttaacattttgtaggatgtagtt 10658932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 15289157 - 15289052
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||| ||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||| ||||||||| || | ||||| |||||    
T  15289157 taaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgagaatt 15289058  T
Q  165 aggttt 170  Q
    ||||||    
T  15289057 aggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 18955382 - 18955330
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| |||||||||||||||||||||||||||||  |||||||||||||    
T  18955382 taaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaa 18955330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 167
Target Start/End: Original strand, 36704566 - 36704673
Alignment:
Q  61 taatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgg-gaatttgg 159  Q
    |||| ||||||||||||| ||||||| |||| ||||| |||||||| |||||||||||||   |||| ||||||||| | ||||||| ||| | |||||     
T  36704566 taatctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaatttgatttaacatgttgtaagatgtagttttggaggatttga 36704665  T
Q  160 gaattagg 167  Q
    ||||||||    
T  36704666 gaattagg 36704673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 78
Target Start/End: Complemental strand, 16214579 - 16214514
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtg 78  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||   |||  |||||||||||||    
T  16214579 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtg 16214514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 3287796 - 3287744
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  || |||||||||||||||||    
T  3287796 taaggtaagggtgagactagctttctctaataataggttgtataattctgaaa 3287744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 11054765 - 11054642
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttggg-aat 163  Q
    ||||||||||||| ||||||| |||  | ||||||||| || | ||||||||| |||| |||| || |||||| |||||| || |||||||||||| |||    
T  11054765 taaggtaagggtgggactaaccttcaatgattctaagt-gtttgattctgaaaattgaatttaacaggttgtaggttgtaattttgggaatttgggaaat 11054667  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| ||  ||||||||||||||||    
T  11054666 tagggttataagttgtaattggttg 11054642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 13744469 - 13744540
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||| |  |||||||||| ||||||||||||| ||||| |||||||||||    
T  13744469 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 13744540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 18990899 - 18990847
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| ||||| |||||||||||||||||||||||  |||||||||||||    
T  18990899 taaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 18990847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 25943360 - 25943289
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||| ||| ||||||||||| |  |||||||||| ||||||||||||| ||||| |||||||||||    
T  25943360 gagaagatgaacaaacttgtagagtctgtaatcatctaatataaggtaagggtgggactagctttctctaat 25943289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 29052182 - 29052234
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  29052182 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29052234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 41285043 - 41284963
Alignment:
Q  106 tataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 186  Q
    ||||||||||||||||  ||||  | ||| || ||||||||| | |||||||||||||||||||| |||||| ||||||||    
T  41285043 tataattctgaaattggatttaataggttataggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 13315049 - 13315134
Alignment:
Q  35 gagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||| ||||||||||| ||  | ||||||| ||||||||||||||||||| |||||||||||  |  ||||||| |||||||||    
T  13315049 gagcaagcttgtagagtctgaaataatctaatctaaggtaagggtgagactatctttctctaataatgggttgtatgattctgaaa 13315134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 14156353 - 14156410
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagacta 84  Q
    ||||||| |||||||||||||||  ||||| ||||||| ||||||||||||| |||||    
T  14156353 gagaagaggagcaatcttgtagataccgataatctaatctaaggtaagggtgggacta 14156410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 43745721 - 43745656
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||  | |||||||||||| |||||    
T  43745721 cgatcatctaacctaaggtaagggtgggactagctttctctaataatgagttgtataattatgaaa 43745656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 16250222 - 16250274
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| |||||||||||||||||  | |||||||||||| |||||    
T  16250222 taaggtaagggtgggactaactttctctaataatgagttgtataattttgaaa 16250274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 16550005 - 16550057
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||| || ||||||||||||||||||||||||  | |||||||||||    
T  16550005 taaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16550057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 16615657 - 16615605
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||| || ||||||||||||||||||||||||  | |||||||||||    
T  16615657 taaggtaaggttgggactaactttctctaattctaagtattttaattctgaaa 16615605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 18874665 - 18874717
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  18874665 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 18874717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 15119254 - 15119337
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||| ||||||||||| |||||||||||||||||  ||||   |||  ||||||||||||  ||||||| |||| ||||    
T  15119254 gagaagaatattgtgagaagaggagcaatcttgtagagtttgatcgattaacctaaggtaagggtaggactaaccttctttaat 15119337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 231
Target Start/End: Complemental strand, 25942401 - 25942358
Alignment:
Q  188 gttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||| ||||||||||||| || ||||||    
T  25942401 gttaatagagtagaaaatccattgaatttgtgtacaattgatgt 25942358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 36685187 - 36685253
Alignment:
Q  108 taattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaa 174  Q
    ||||||||||| ||  |||| || |||||| ||||||||| ||| ||||||||||||||| ||||||    
T  36685187 taattctgaaactggatttaacaggttgtaggttgtagttttggaaatttgggaattagggtttgaa 36685253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 20252182 - 20252234
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||  ||||| |||||||||||  | ||||||||||||||||||    
T  20252182 taaggtaagggtaggactagctttctctaataatgagttgtataattctgaaa 20252234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 37539541 - 37539470
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||| |  |||||||||| ||| ||||||||| ||||||| |||| ||||    
T  37539541 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaagtaagggtgggactaacattctataat 37539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 19655178 - 19655396
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19655178 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 19655277  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  19655278 ctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttga 19655377  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  19655378 atttgtgtagaattgatgt 19655396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 7828077 - 7827859
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7828077 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 7827978  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7827977 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatcggttga 7827878  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  7827877 atttgtgtagaattgatgt 7827859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 23150234 - 23150452
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23150234 gagaaaaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 23150333  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||    
T  23150334 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaatttgttga 23150433  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  23150434 atttgtgtagaattgatgt 23150452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 17 - 231
Target Start/End: Original strand, 27125428 - 27125642
Alignment:
Q  17 agaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctga 116  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  27125428 agaattttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataagtctaa 27125527  T
Q  117 aattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 216  Q
    ||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27125528 aattgagattagcatgttgtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaattt 27125627  T
Q  217 gtgtagaagtgatgt 231  Q
    || ||||||||||||    
T  27125628 gtatagaagtgatgt 27125642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 18703673 - 18703451
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  18703673 gagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataatt 18703574  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgt----aattggttgttaatagagtagaaaatccg 208  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||    |||||||||||||||||||||||||||||    
T  18703573 ctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccg 18703474  T
Q  209 ttgaatttgtgtagaagtgatgt 231  Q
    |||||||||| ||||||||||||    
T  18703473 ttgaatttgtatagaagtgatgt 18703451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 18709608 - 18709386
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  18709608 gagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagtgtgggactaactttctctaattctaagttgtataatt 18709509  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgt----aattggttgttaatagagtagaaaatccg 208  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||    |||||||||||||||||||||||||||||    
T  18709508 ctgaaattgagtttagaatgttgtaggttgtagttatgggaatttgggaattagattttgaagttgtaattaattggttgttaatagagtagaaaatccg 18709409  T
Q  209 ttgaatttgtgtagaagtgatgt 231  Q
    |||||||||| ||||||||||||    
T  18709408 ttgaatttgtatagaagtgatgt 18709386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 15890712 - 15890877
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| ||  |||||||||||||    
T  15890712 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttttgttaatttgggaatta 15890811  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15890812 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 15890877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 27329981 - 27330131
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||    
T  27329981 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27330080  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27330081 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27330131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 27390721 - 27390871
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||    
T  27390721 taaggtaagagtgtgactaactttctctaattctaggttgtataattctgaaattgagtttaacatgttgtaggttgtagttatggcaatttgggaatta 27390820  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27390821 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaattt 27390871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 24267900 - 24267801
Alignment:
Q  67 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattag 166  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattag 24267801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 19235175 - 19235021
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||| |||||||| || ||||||||||||||| || ||||||||||||||||||||||||||| |||||||   ||||   | || ||||||||| ||||    
T  19235175 taagttaagggtgggattaactttctctaattttaggttgtataattctgaaattgattttaggatgttgttgtttgtgaatttgtgaatttggg-atta 19235077  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||||| ||||||||||||||||| |||||||||||| ||||| |||||||    
T  19235076 ggttttgaagtcgtaattggttgttaataaagtagaaaatccattgaacttgtgta 19235021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 28948627 - 28948468
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgta-gttatgggaatttgggaatt 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| |||||| ||| | | ||||||||||||    
T  28948627 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaactggatttaacaagtggtaagttgtaggttttagaaatttgggaatt 28948528  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||| |||||||||||||||||||   | ||||||||||  |||||||| ||||||||    
T  28948527 aggtttagaagttgtaattggttgttttaatagtagaaaatatgttgaattggtgtagaa 28948468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 18585854 - 18585733
Alignment:
Q  69 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggt 168  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| ||| ||||| ||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 18585755  T
Q  169 tttgaagttgtaattggttgtt 190  Q
    || |||||||||||||||||||    
T  18585754 ttagaagttgtaattggttgtt 18585733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 184
Target Start/End: Complemental strand, 18928733 - 18928614
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||  |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||| |||| |||| ||||||||||| ||||    
T  18928733 taaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 18928634  T
Q  165 aggttttgaagttgtaattg 184  Q
    |||||| |||||||||||||    
T  18928633 aggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 20410459 - 20410564
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||  | || |||||||||||  |  |||||||||||    
T  20410459 gagaagaatcttgtgagaagaggagcaatcttgtagagtgcgatcatctaatttaaggtaagggtggaaatagctttctctaataatgggttgtataatt 20410558  T
Q  113 ctgaaa 118  Q
    ||||||    
T  20410559 ctgaaa 20410564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 17318113 - 17318184
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagacta 84  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17318113 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta 17318184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 30673402 - 30673550
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| || ||||||||||||||| || ||||||||||| ||||||||| |||||||||    ||||||    | || |||||| |||||||    
T  30673402 taaggtaagggtgggattaactttctctaattttaggttgtataattttgaaattgagtttagcatg----atgttg----tttgtgaattttggaatta 30673493  T
Q  166 ggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||| | |||| |||||||||||||||||||||||| | |||||||||||||    
T  30673494 ggttttgaattagtaatttggttgttaatagagtagaaaattcattgaatttgtgta 30673550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 19167926 - 19167992
Alignment:
Q  155 tttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  19167926 tttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatttgtgta 19167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 19401147 - 19401028
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    |||||||||||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||| ||||||||| |||||||||| ||||    
T  19401147 ttaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgagaat 19401049  T
Q  164 taggttttgaagttgtaattg 184  Q
    |||||||  ||||||||||||    
T  19401048 taggtttataagttgtaattg 19401028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 27572121 - 27572188
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatg 132  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||    
T  27572121 ttaaggtaagggtgagactaactttctctaattctaagtcgtataattctgaaattgaatttaacatg 27572188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 15998941 - 15998889
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15998941 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 15998889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 19825447 - 19825538
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||| |||||||||||  |  |||| ||||||||||||    
T  19825447 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgcataattctgaaa 19825538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 31731904 - 31732009
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||||||||| ||||||||||  |||||||||| ||||||  |||  || |||||| ||||||||| |||| ||||| |||||    
T  31731904 taaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgagaatt 31732003  T
Q  165 aggttt 170  Q
    ||||||    
T  31732004 aggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 23501724 - 23501601
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaat-tgattttagcatgttgtatgttgtagttatgggaa-tttgggaat 163  Q
    ||||||||||||||||||||| |||  ||||||||| | || |||||||||||  ||| |||| || |||||| ||||||||| | |||| |||||||||    
T  23501724 taaggtaagggtgagactaaccttcaataattctaaat-gtttaattctgaaaactgaatttaacaagttgtaggttgtagtttttggaaatttgggaat 23501626  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    ||||||| |||||||||||| ||||    
T  23501625 taggtttagaagttgtaatttgttg 23501601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 12041620 - 12041672
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  12041620 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaa 12041672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 31734809 - 31734729
Alignment:
Q  16 aagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||||||| ||||||||||||||||| |||||   |||  ||||||||||||| ||||||| |||| ||||    
T  31734809 aagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 31734729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 24550168 - 24550271
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||  |||| ||||| |||||||| ||||||||||||||  |||| ||||||||| | ||||||| |||  ||||  ||||||    
T  24550168 taaggtaagggtgggactaaacttctttaattgtaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 24550267  T
Q  166 ggtt 169  Q
    ||||    
T  24550268 ggtt 24550271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 25922092 - 25922033
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaac 86  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||| |||||||    
T  25922092 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaac 25922033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 23431420 - 23431477
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||||||||||||||| ||||||||| ||| ||||||| |||| ||||    
T  23431420 aatcttgtagagtccgatcatctaatctaaggtaagcgtgggactaaccttctttaat 23431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15900654 - 15900706
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||| ||||||||||||||||||||  | |||||||||||    
T  15900654 taaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaa 15900706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 18259262 - 18259328
Alignment:
Q  156 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||||||||||||||| | |||||||| ||||||||| || |||||||||| | |||||||||||    
T  18259262 ttgggaattaggttttgagaattgtaattagttgttaattgaatagaaaatccatagaatttgtgta 18259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 136
Target Start/End: Original strand, 19167853 - 19167923
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 136  Q
    |||||||||||||  | ||||||| ||||||  || ||||||||||||||| ||||| |||||||||||||    
T  19167853 taaggtaagggtggaattaactttgtctaatattaggttgtataattctgatattgagtttagcatgttgt 19167923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 10446310 - 10446239
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| | ||||||||| ||  ||||||||| ||||||||||||| ||||| |||||||||||    
T  10446310 gagaagaggagcaagcatgtagagtctgaaatcatctaatctaaggtaagggtgggactagctttctctaat 10446239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15173453 - 15173505
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| |||| ||||||||||||||||||||||||  | |||||||||||    
T  15173453 taaggtaatggtgggactaactttctctaattctaagtattttaattctgaaa 15173505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 29625231 - 29625191
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataa 110  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  29625231 gtaagggtgggactaactttctctaattctacgttgtataa 29625191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 29045334 - 29045271
Alignment:
Q  55 atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| | ||||||||||||||||||| |||||||||||  |  ||||||||||| |||||    
T  29045334 atcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattttgaaa 29045271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 13285841 - 13285748
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgat--catctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| |||||| ||||||||||| ||   |||||||| ||||||||||||| ||||||| |||| ||||  | ||||  ||||||||||||    
T  13285841 gagaagaggagcaagcttgtagagtctgaaaccatctaatctaaggtaagggtgggactaaccttctataatcatgagtttcataattctgaaa 13285748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 21683062 - 21683127
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||  |  |||||||||||| ||||    
T  21683062 cgatcatctaacctaaggtaagggtgggactagctttctctaataatgggttgtataattcagaaa 21683127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 23658146 - 23658089
Alignment:
Q  61 taatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||| ||||||||||||| ||||| ||||| |||||  || |||||||||||||||||    
T  23658146 taatctaaggtaagggtgggactagctttccctaataataggttgtataattctgaaa 23658089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 5031076 - 5031297
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5031076 gagaagaatcttgtgagaagatgagcaatcttgtagagtccaatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 5031175  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  5031176 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtataaaattcgttga 5031275  T
Q  213 atttgtgtagaagtgatgtcca 234  Q
    ||||||||||||||||||||||    
T  5031276 atttgtgtagaagtgatgtcca 5031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 24780787 - 24781005
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24780787 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 24780886  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24780887 ctgaaattgagtttagcatgaagtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 24780986  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||    
T  24780987 atttgtgtagaagtgatgt 24781005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 24436753 - 24436535
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  24436753 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaactttctcgaattctaagttgtataatt 24436654  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24436653 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttga 24436554  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  24436553 atttgtgtagaattgatgt 24436535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 9976034 - 9975816
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  9976034 gagaagaatcttatgagaagaggaacaatcttgtagagtccgatcatctaatttaaggtaagggttggactaactttctctaattctaagttgtataatt 9975935  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||    
T  9975934 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagacaatccgctga 9975835  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  9975834 atttgtgtagaattgatgt 9975816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 22251395 - 22251600
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  22251395 gagaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatttaaggtaagggtgaaactaattttctctaattctaagttgtataatt 22251494  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22251495 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttga 22251594  T
Q  213 atttgt 218  Q
    ||||||    
T  22251595 atttgt 22251600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 27 - 231
Target Start/End: Complemental strand, 17307577 - 17307373
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgatttt 126  Q
    ||||||| ||||||  | |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||    
T  17307577 gagaagaggagcaaaatcgtagagaccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagttt 17307478  T
Q  127 agcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagt 226  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  17307477 agcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaatt 17307378  T
Q  227 gatgt 231  Q
    |||||    
T  17307377 gatgt 17307373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 2523694 - 2523912
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2523694 gagaaaaatcttgtgagaagaggagcaatcttgtaaagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 2523793  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    || ||||||| |||| ||||||||| |||||| |||||||||||||| ||||||||||| || |||||||||||| ||||||||||||||||| ||||||    
T  2523794 cttaaattgagtttaacatgttgtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggttattaatagagtagaaaattcgttga 2523893  T
Q  213 atttgtgtagaagtgatgt 231  Q
    ||||||| |||| ||||||    
T  2523894 atttgtgcagaattgatgt 2523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 24516238 - 24516073
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  24516238 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 24516139  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24516138 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 24516073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 40912372 - 40912207
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  40912372 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40912273  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40912272 ggttttgaagttgtagttggttgttaatagagtagaaaattcgttgaatttgtgtagaaatgatgt 40912207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 53 - 231
Target Start/End: Original strand, 19201187 - 19201365
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatggg 152  Q
    |||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||| ||    
T  19201187 cgatcatctaacctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttatcatgttgtaggttgtagttatagg 19201286  T
Q  153 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  19201287 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgggtagaattgatgt 19201365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 37270747 - 37270587
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| |||||| |||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaagtt 37270648  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  37270647 ttgaagttgtaatgggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 37270587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 103 - 231
Target Start/End: Original strand, 27484514 - 27484642
Alignment:
Q  103 ttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaa 202  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  27484514 ttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaa 27484613  T
Q  203 aatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||| ||||||    
T  27484614 aatccgttgaatttgtgtagaattgatgt 27484642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 13 - 180
Target Start/End: Complemental strand, 27852769 - 27852605
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||    || ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  27852769 gagaagaatcttgtgaaaagaggagcattcttgtagagtccgatca----atctaaggtaagggtgggactaactttctctaattctaagtggtataatt 27852674  T
Q  113 ctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgta 180  Q
    ||| ||||||| |||| || |||||| ||||| ||| |||||||||||||||||| ||| |||||||||    
T  27852673 ctgaaaattgaatttaacaagttgtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 36841268 - 36841151
Alignment:
Q  114 tgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaa 213  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  36841268 tgaaattgagtttaacatgttgtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgttaatagagtagaaaatatgttgaa 36841169  T
Q  214 tttgtgtagaagtgatgt 231  Q
    ||||||||||| ||||||    
T  36841168 tttgtgtagaattgatgt 36841151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 25142256 - 25142133
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||| |||| || |||||| ||||||||| ||||||||||||||||    
T  25142256 taaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 25142157  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||||||||    
T  25142156 aggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 1383545 - 1383667
Alignment:
Q  68 aggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattagg 167  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| ||| |||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagttgtatcattctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaattagg 1383644  T
Q  168 ttttgaagttgtaattggttgtt 190  Q
    ||| |||||||||||||||||||    
T  1383645 tttagaagttgtaattggttgtt 1383667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 22502050 - 22501897
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgta 137  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  | ||||||||| |||||  |||| ||||||||     
T  22502050 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22501951  T
Q  138 tgttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttgtt 190  Q
     ||||||||| |  ||||||||| ||||||| || |||||||| ||||||||||    
T  22501950 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22501897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 39 - 190
Target Start/End: Complemental strand, 22509984 - 22509831
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgta 137  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||  | ||||||||| |||||  |||| ||||||||     
T  22509984 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtg 22509885  T
Q  138 tgttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttgtt 190  Q
     ||||||||| |  ||||||||| ||||||| || |||||||| ||||||||||    
T  22509884 ggttgtagttttatgaatttgggaaattagggttagaagttgtgattggttgtt 22509831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 357933 - 357809
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| | | |||||||||||||    
T  357933 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 357834  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| |||||||||||||||||||    
T  357833 ggtttagaagttgtaattggttgtt 357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 21369398 - 21369293
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | ||||||||||   |  |||||||||||    
T  21369398 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggacaagctttctctaacaatgggttgtataatt 21369299  T
Q  113 ctgaaa 118  Q
    ||||||    
T  21369298 ctgaaa 21369293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 3539889 - 3539766
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| |||||||||||||||||| ||||| ||||||||||| |||| || |||| || |||||| ||||||||| | |||||||| |||||    
T  3539889 taaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttttggaatttgagaatt 3539790  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||||||||    
T  3539789 aggtttagaagttgtaattggttg 3539766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 79
Target Start/End: Complemental strand, 36841332 - 36841266
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtga 79  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36841332 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtga 36841266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 90
Target Start/End: Complemental strand, 31521274 - 31521197
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttc 90  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||    
T  31521274 gagaagaatcttgtgagaagaggagcaatcttgtacagtccgatcatctaatttagggtaagggtgaggctaactttc 31521197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 14179675 - 14179758
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||||||| |||| ||||    
T  14179675 gagaataatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatataaggtaagggtgggactaaccttctttaat 14179758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 166
Target Start/End: Complemental strand, 44072609 - 44072509
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||| || ||||||| ||||||| |||||| ||||||||| ||||||||||| ||||    
T  44072609 taaggtaagggtgagactaactttcactaattctaag-tgtatgattttgaaaattgaatttagcaagttgtaggttgtagttttgggaatttggaaatt 44072511  T
Q  165 ag 166  Q
    ||    
T  44072510 ag 44072509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 149474 - 149549
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    |||||||||||||||||||||||||| |||||||||||||  |||| |||||||||||  | ||||||||||||||    
T  149474 aatcttgtagagtccgatcatctaatctaaggtaagggtggaactagctttctctaataatgagttgtataattct 149549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 14183414 - 14183496
Alignment:
Q  14 agaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||||||||   ||||||||| || | |||||||||||||||||||||||||||| ||||||| |||| ||||    
T  14183414 agaagaatcttgtgagaagtgaagcaatcttataaaatccgatcatctaatttaaggtaagggtgggactaaccttctttaat 14183496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 178
Target Start/End: Original strand, 18390229 - 18390326
Alignment:
Q  81 actaactttctctaattctaagttgtataattctgaaatt-gattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttg 178  Q
    |||||||||||||||||||||||  ||||||||||||| | || |||| || || ||||||||||||| ||||||||||||||||||| || |||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaacaagt-gtatgttgtagttttgggaatttgggaattaggattagaagttg 18390326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 22260090 - 22259974
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||| ||| ||||||||||| ||||||||||| || || |||||| ||||||| |||| || |||||| ||||||||| | ||||||||||||||    
T  22260090 taaggtaagagtgtgactaactttcactaattctaag-tgcatgattctgaaaattgaatttaacaggttgtaggttgtagtt-taggaatttgggaatt 22259993  T
Q  165 aggttttgaagttgtaatt 183  Q
    ||| || ||||||||||||    
T  22259992 aggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 25046170 - 25046066
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||| | ||||||| || | ||||  |||||    
T  25046170 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 25046071  T
Q  165 aggtt 169  Q
    |||||    
T  25046070 aggtt 25046066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 20916412 - 20916326
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattct 99  Q
    |||| ||||||| |||||||| ||||||||||||||||  |||||||||||||||| |||||||||  |||||| |||  |||||||    
T  20916412 gagaggaatcttatgagaagaggagcaatcttgtagagctcgatcatctaatttaaagtaagggtggaactaaccttcaataattct 20916326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 5986229 - 5986125
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||| ||| |||| ||||||||||||||||||||||| ||||||  |||| || |||||| ||| ||||| || | ||||| |||||    
T  5986229 taaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaatt 5986130  T
Q  165 aggtt 169  Q
    |||||    
T  5986129 aggtt 5986125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 25184241 - 25184189
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  25184241 taaggtaagggtgagactaactttctctaattctaagtattttaattctgaaa 25184189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 167
Target Start/End: Complemental strand, 14694383 - 14694276
Alignment:
Q  61 taatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatggga-atttg 158  Q
    |||| |||||||||||||||||||||||||| |||||||||||  | ||||| || ||||||  |||| |||| |||| ||||||||| ||||| |||||    
T  14694383 taatctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggttgtagtt-tgggagatttg 14694285  T
Q  159 ggaattagg 167  Q
     ||||||||    
T  14694284 agaattagg 14694276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 19358943 - 19358820
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttggg-aat 163  Q
    ||||||||||||| ||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| || |||||  ||||||||| |||||||||||| |||    
T  19358943 taaggtaagggtgggactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaagttgtgggttgtagttttgggaatttgggaaat 19358845  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  19358844 tagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 21080969 - 21081021
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21080969 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 21081021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 24718124 - 24718080
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatc 57  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||    
T  24718124 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatc 24718080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 18388190 - 18388312
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||||||||||| |||  |||| || |||  ||| ||||||||| |||  |||| || |||||| ||||||||| ||||||||||||||||    
T  18388190 taaggtaagggtgagactaaccttcaataatcctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatt 18388288  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    | | || ||||||| || ||||||    
T  18388289 atggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 24884449 - 24884399
Alignment:
Q  139 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 189  Q
    ||||||||| ||  |||||||||||||||||| ||||||||||||||||||    
T  24884449 gttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgt 24884399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 12626399 - 12626478
Alignment:
Q  39 aatcttgtagagtccgatca-tctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||||||||| || ||| ||||||||||||| ||||||| |||  ||||  |||| |||||||||||||||    
T  12626399 aatcttgtagagtccgatcattcaaatgtaaggtaagggtgggactaaccttcattaatcataag-tgtataattctgaaa 12626478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 21915672 - 21915624
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21915672 gtaagggtgtgactaactttctctaattctaagtattttaattctgaaa 21915624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 23801559 - 23801518
Alignment:
Q  55 atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||| ||||||||||||| ||||| |||||||||||    
T  23801559 atcatctaatctaaggtaagggtgggactagctttctctaat 23801518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Original strand, 18357975 - 18358019
Alignment:
Q  74 gggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||| ||||||||||||||||||||||||  | |||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaa 18358019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 21315476 - 21315528
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  21315476 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21315528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 21335266 - 21335318
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  21335266 taaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 21335318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 4661 - 4879
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  4661 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtcggactaactttctctaattctaagttgtataatt 4760  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4761 ctgaaattgagtttagcatgttgtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 4860  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||    
T  4861 atttgtgtagaagtgatgt 4879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 5821 - 5869
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||| |||||||||||||||  |||||||||||||| |||||||||||    
T  5821 gtaagtgtgagactaactttccttaattctaagttgtgtaattctgaaa 5869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 25091758 - 25091540
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25091758 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 25091659  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25091658 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 25091559  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  25091558 atttgtgtagaattgatgt 25091540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 53630422 - 53630639
Alignment:
Q  14 agaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattc 113  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  53630422 agaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattc 53630521  T
Q  114 tgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaa 213  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  53630522 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaa 53630621  T
Q  214 tttgtgtagaagtgatgt 231  Q
    ||||||||||| ||||||    
T  53630622 tttgtgtagaattgatgt 53630639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 10356383 - 10356601
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  10356383 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcttttaatttaaggtaaggttgggactaactttctctaattctaagttgtataatt 10356482  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10356483 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggtagttaatagagtagaaaatccgttga 10356582  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  10356583 atttgtgtagaattgatgt 10356601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 19610429 - 19610211
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19610429 gagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttctctaattttaagttgtataatt 19610330  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||| |    
T  19610329 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgttaatagagtagaaaatccgttaa 19610230  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  19610229 atttgtgtagaattgatgt 19610211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 42875902 - 42875684
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||| |||||||||| ||| ||||||||||||||||||||| |||||||||| | ||||||||||||||||||||    
T  42875902 gagaagaatcttgtgagaagaggagcaattttgtagagtctgattatctaatttaaggtaagggtgggactaactttatataattctaagttgtataatt 42875803  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42875802 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgttaatagagtagaaaatccgttga 42875703  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  42875702 atttgtgtagaattgatgt 42875684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 16998630 - 16998412
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||||||||  | ||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16998630 gagaagaatcttgtgagaagagaaacaattccgtagagtccgatcatctaatttaaggtaagagtgagactaactttctctaattctaagttgtataatt 16998531  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
     ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  16998530 atgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaattcgttga 16998431  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||| | ||||||    
T  16998430 atttgtgtagtattgatgt 16998412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 44 - 236
Target Start/End: Complemental strand, 11426017 - 11425825
Alignment:
Q  44 tgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgt 143  Q
    ||||||| |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  11426017 tgtagagaccgatcatcatatttaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgt 11425918  T
Q  144 agttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtccatc 236  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  11425917 agttatgggaatttgggaattaggttttgaaattgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgttcatc 11425825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 15115274 - 15115109
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  15115274 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 15115175  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
      ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  15115174 ttttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 15115109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 37019722 - 37019564
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||||    
T  37019722 taaggtaagggtgtgactaactttctctaattttaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgagaatta 37019623  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37019622 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaa 37019564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 46001535 - 46001695
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 46001634  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  46001635 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 46001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 6633541 - 6633701
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 6633640  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  6633641 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 6633701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 10694192 - 10694297
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||    
T  10694192 gagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaatt 10694291  T
Q  113 ctgaaa 118  Q
    ||||||    
T  10694292 ctgaaa 10694297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 10907958 - 10908063
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||    
T  10907958 gagaagaatctcgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaaatttctctaattctaagtaatttaatt 10908057  T
Q  113 ctgaaa 118  Q
    ||||||    
T  10908058 ctgaaa 10908063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 9924206 - 9924085
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||| |||| |||| ||||||||||| ||||    
T  9924206 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 9924107  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||||||||||    
T  9924106 aggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 12424237 - 12424342
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||    
T  12424237 gagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataatt 12424336  T
Q  113 ctgaaa 118  Q
    ||||||    
T  12424337 ctgaaa 12424342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 14549812 - 14549695
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||| ||  |||| || || ||| ||||||||| ||| |||||||||||||    
T  14549812 taaggtaagggtgagactaactttctctaattctaagttgtatgtttctgaaactggatttaacaggtggtaggttgtagttttggaaatttgggaatta 14549713  T
Q  166 ggttttgaagttgtaatt 183  Q
    ||||| ||||||||||||    
T  14549712 ggtttagaagttgtaatt 14549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 25513956 - 25513851
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| |||| ||||| |||||||||||  | ||||||||||||    
T  25513956 gagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatctaaggtaatggtgggactagctttctctaataatgagttgtataatt 25513857  T
Q  113 ctgaaa 118  Q
    ||||||    
T  25513856 ctgaaa 25513851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 19022449 - 19022366
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  19022449 gagaataatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaaaggtgagactaactttctctaat 19022366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 9639115 - 9639010
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||| |||||||||||||||||| ||||||| ||||||||||||| ||||| |||||||||||  | |||||| |||||    
T  9639115 gagaagaatcttgtgagaagaggagaaatcttgtagagtccgataatctaatctaaggtaagggtgggactagctttctctaataatgagttgtgtaatt 9639016  T
Q  113 ctgaaa 118  Q
    ||||||    
T  9639015 ctgaaa 9639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 11478653 - 11478772
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||| |||| || ||||||  ||| |||| ||||||||||| ||||    
T  11478653 taaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaacaagttgtagattgaagttttgggaatttggaaatt 11478752  T
Q  165 aggttttgaagttgtaattg 184  Q
    |||||| ||| |||||||||    
T  11478753 aggtttagaacttgtaattg 11478772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 40230411 - 40230328
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||| |||||||||||| ||||    
T  40230411 gagaagaatcttgtgagaagaggagcaatcttgtagagttcaatcatctaatctaaggtaagggtgggactaactttctttaat 40230328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 19434559 - 19434672
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| | | |||||||||||||    
T  19434559 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtttttgaaatttgggaatta 19434658  T
Q  166 ggttttgaagttgt 179  Q
     |||| ||||||||    
T  19434659 agtttagaagttgt 19434672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 21248 - 21144
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||| || | ||||| |||||    
T  21248 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 21149  T
Q  165 aggtt 169  Q
    |||||    
T  21148 aggtt 21144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 9870444 - 9870568
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttggg-aat 163  Q
    |||| |||||||| |||||||||||  ||||||||||||||||||||||| ||||||  |||  |||| |||| ||||||||| |||||||||||| |||    
T  9870444 taagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttgggaatttgggaaat 9870543  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  9870544 tagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 118
Target Start/End: Complemental strand, 33186986 - 33186903
Alignment:
Q  35 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||  |  |||||||||||||||||    
T  33186986 gagcaattttgtagagtccgatcatctaatttaaggtaggggtgagactagctttctctaataatgggttgtataattctgaaa 33186903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 26921708 - 26921774
Alignment:
Q  153 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||    
T  26921708 aatttgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccaatgaatttgtg 26921774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 2424374 - 2424439
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2424374 cgatcatctaacctaaggtaagggtgagactaactttctctaattctaagttgtataattttgaaa 2424439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 15613142 - 15613061
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||  |||| ||||||||| | |||||||    
T  15613142 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattggatttaacatgttgtaggatgtagtt 15613061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 51993613 - 51993532
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||||||  |||| ||||||||| | |||||||    
T  51993613 taaggtaagggtgggactaaccttctttaattctaagttgtgtaattctgaaattggatttaacatgttgtaggatgtagtt 51993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 44023554 - 44023633
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||||| |||| |||||||||||||||||||||||    ||| ||||||||||||| ||||||| |||| ||||    
T  44023554 gagaagaatcttgtgaaaagaggagcaatcttgtagagtccgatc----aatctaaggtaagggtgcgactaaccttctttaat 44023633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 33243267 - 33243324
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||| |||| ||||    
T  33243267 aatcttgtagagtcccatcatctaatctaaggtaagggtgagactaacattctttaat 33243324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 35811375 - 35811428
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||| |||||    
T  35811375 ttaaggtaagggtgggactaactttctctaattctaagtggtataattttgaaa 35811428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 14187010 - 14186955
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattga 122  Q
    ||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||    
T  14187010 taaggtaagggtgggagtaactttctctaattctaag-tgtatgattctgaaattga 14186955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 15009015 - 15008963
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  15009015 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 15008963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 32466194 - 32466244
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga 116  Q
    ||||||||||||||||||||  |||| |||||||||||||| |||||||||    
T  32466194 taaggtaagggtgagactaatcttctttaattctaagttgtgtaattctga 32466244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 21062693 - 21062656
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagt 103  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  21062693 taaggtaagggtgggactaactttctctaattctaagt 21062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 10273476 - 10273405
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||| ||  || |||||| ||||||||||||| ||||| |||||||||||    
T  10273476 gagaagaggagcaagcttgtagagtctgaaatcgtctaatctaaggtaagggtgggactagctttctctaat 10273405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 14631187 - 14631135
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  14631187 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14631135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 16296990 - 16296938
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  16296990 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 16296938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 40620584 - 40620532
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  40620584 taaggtaagggtgggaataactttctctaattctaagtattttaattctgaaa 40620532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 27028708 - 27028642
Alignment:
Q  156 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||||||||||||||| | ||| |||| ||||||||| || |||||||||| | |||||||||||    
T  27028708 ttgggaattaggttttgagaattgcaattagttgttaattgaatagaaaatccatagaatttgtgta 27028642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 9638972 - 9638939
Alignment:
Q  155 tttgggaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||| |||||||||||||||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttg 9638939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 13847253 - 13847205
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||    
T  13847253 taaggtaagggtgagactagctttctctaataatgggttgtataattct 13847205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15239816 - 15239868
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  | | |||||||| |||||||    
T  15239816 taaggtaagggtgagactagctttctctaataatgaattgtataaatctgaaa 15239868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 55583289 - 55583218
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||||||  ||| |  || ||||||||||||| ||||| |||||||||||    
T  55583289 gagaagaggagcaaacttgtagagtccgaattcaacctatctaaggtaagggtgggactagctttctctaat 55583218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 195; Significance: 1e-106; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 19676816 - 19676598
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19676816 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 19676717  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19676716 ctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 19676617  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  19676616 atttgtgtagaattgatgt 19676598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 21045996 - 21046214
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  21045996 gagaagaatcttgtgagaagaggtgcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 21046095  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21046096 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttga 21046195  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  21046196 atttgtgtagaattgatgt 21046214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 20633578 - 20633799
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  20633578 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaagataagggtgggactaacttgctctaattctaagttgtataatt 20633677  T
Q  113 ctgaaattgattttagcatgttgtatgttgtag---ttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgt 209  Q
    |||||||||| |||||||||||||| ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||  ||    
T  20633678 ctgaaattgagtttagcatgttgtaggttatagttattatgggaatttgggaattaggttttgaagttgtaattggttgttaatagaataaaaaataagt 20633777  T
Q  210 tgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||| ||||||    
T  20633778 tgaatttgtgtagaattgatgt 20633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 39 - 231
Target Start/End: Original strand, 16058287 - 16058478
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtat 138  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  16058287 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaattgagtttagcatgttgtag 16058386  T
Q  139 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16058387 gttgtagttatggaaatttgggaattagg-tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 16058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 42913101 - 42912936
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| |||||||    
T  42913101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttgtgggaatttaggaatta 42913002  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  42913001 ggttttgaagttgtaattggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 42912936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 51324556 - 51324398
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| |||||| ||||||||||    
T  51324556 taaggtaagggtgagactaactttccctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttgggaaattgggaatta 51324457  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||  ||||||||||||||||||   | |||||||||||  ||||||| ||||||||    
T  51324456 ggtttaaaagttgtaattggttgttttaatagtagaaaatctattgaattggtgtagaa 51324398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 13302954 - 13302849
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||| ||||||||| ||||||||||||||||    
T  13302954 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaatt 13302855  T
Q  165 aggttt 170  Q
    ||||||    
T  13302854 aggttt 13302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 24723351 - 24723475
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||| || || |||  |||||||| ||| |||||| ||||||    
T  24723351 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactgaatttaacaggtggtagattgtagttttggaaatttgagaatta 24723450  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
     |||| |||||||||||||||||||    
T  24723451 tgtttagaagttgtaattggttgtt 24723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 28476683 - 28476786
Alignment:
Q  15 gaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||||| |||||  ||||||||||  | ||||||||||||||    
T  28476683 gaagaatcttgtgagaagaggagcaatcttgcagagtccggtcatctaatctaaggtaagggtgggactagatttctctaataatgagttgtataattct 28476782  T
Q  115 gaaa 118  Q
    ||||    
T  28476783 gaaa 28476786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 7051922 - 7052046
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||  || ||||| | | |||||||||||||    
T  7051922 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattttagttttagaaatttgggaatta 7052021  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| ||| |||||||||||||||    
T  7052022 ggtttagaaattgtaattggttgtt 7052046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 21168985 - 21168831
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||  | ||||||||||||||| || ||||||||||||| ||||||| |||||||||||||   ||||   | || |||||||||||| |    
T  21168985 taaggtaagggtggaattaactttctctaattttaggttgtataattctaaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgggaataa 21168886  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||| | ||  || ||| ||||||||||||||||||| |||||||||||||    
T  21168885 ggttttgaattagt-ttttgtttttaatagagtagaaaatccattgaatttgtgta 21168831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 41225401 - 41225484
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||| ||||    
T  41225401 gagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41225484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 41226654 - 41226737
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| ||||||| |||| ||||    
T  41226654 gagaagaatcttgtgagaagaggagcaatcttgtcgagtacgatcatctaatttaaggtaagggtgggactaaccttctttaat 41226737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 188
Target Start/End: Complemental strand, 22350815 - 22350646
Alignment:
Q  14 agaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattc 113  Q
    ||||||||||| ||||| || ||||||||||||||||||||||||    || ||||||||||||| ||||||| |||  ||||||| |||  ||| ||||    
T  22350815 agaagaatcttatgaga-gaggagcaatcttgtagagtccgatca----atctaaggtaagggtgggactaaccttcaataattctgagta-tatgattc 22350722  T
Q  114 tgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 188  Q
    ||||| |||| |||| || |||||| ||||||||| ||||||||||||||||||| || ||||||| || ||||||    
T  22350721 tgaaaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 12710972 - 12710867
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||| |||||||| | || ||||| |||||||||||  |  |||||||||||    
T  12710972 gagaagaatcttatgagaagaggagcaatcttgtagagtcccatcatctaatctaaggtaaagatgggactagctttctctaatattgggttgtataatt 12710873  T
Q  113 ctgaaa 118  Q
    ||||||    
T  12710872 ctgaaa 12710867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 42697836 - 42697732
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||||||| ||||||||| || | ||||| |||||    
T  42697836 taaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaatt 42697737  T
Q  165 aggtt 169  Q
    |||||    
T  42697736 aggtt 42697732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 20588743 - 20588660
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||    
T  20588743 gagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20588660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 20593281 - 20593198
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||  |||||||||| |||||||||||||||||||||||||| ||||||||||||||||| || || |||||||||||    
T  20593281 gagaagaatactgtgagaagaggagcaatcttgtagagtccgatcatccaatttaaggtaagggtgggattagctttctctaat 20593198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 215
Target Start/End: Original strand, 4595853 - 4595995
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| |||| || |||| || |||||| ||||||||        ||||||||||    
T  4595853 taaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagt--------tttgggaatt 4595944  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 215  Q
    || ||| ||||||||||||||||| |   |||||||| |||||| ||||||    
T  4595945 agatttagaagttgtaattggttgatttaagagtagataatccgatgaatt 4595995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 7320594 - 7320716
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| | | |||||||||||| |||| ||||||||| |||| |||| || ||||||  |||||||| ||||||||||||||||    
T  7320594 taaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaacaggttgtagattgtagttttgggaatttgggaatt 7320692  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    | |||| || ||||||||||||||    
T  7320693 atgtttagatgttgtaattggttg 7320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 12327743 - 12327795
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12327743 taaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaa 12327795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 51336531 - 51336479
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  51336531 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaa 51336479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 8306697 - 8306610
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||| ||| ||||| |||||||||||  |  |||||||||||||    
T  8306697 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagagtgggactagctttctctaataatgggttgtataattct 8306610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 21239049 - 21239130
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| |||||||||    
T  21239049 taaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagtt 21239130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 45755572 - 45755468
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||||||||||| |||| ||||| |||||| ||| |||||| ||| ||  |||| || |||||| ||||||||| || ||||||| |||||    
T  45755572 taaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttgagaatttgagaatt 45755473  T
Q  165 aggtt 169  Q
    |||||    
T  45755472 aggtt 45755468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 44822094 - 44822145
Alignment:
Q  139 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 190  Q
    ||||||||| ||| |||||||||||||||||| |||||||||||||||||||    
T  44822094 gttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgtt 44822145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 17901754 - 17901846
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| |||||| ||| |||||||||  |||||||| | ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  17901754 gagaagaggagcaagctt-tagagtccggaatcatctattctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 17901846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 136
Target Start/End: Complemental strand, 45499446 - 45499374
Alignment:
Q  63 atttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 136  Q
    |||||| ||||||||| || ||||| ||||||||| || ||||||||||||||||||||| |||||||| ||||    
T  45499446 atttaacgtaagggtg-gattaactctctctaattttaggttgtataattctgaaattgagtttagcatattgt 45499374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 29763632 - 29763684
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  29763632 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 29763684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 46197745 - 46197797
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  46197745 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 46197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 6834268 - 6834176
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| |||||| ||| |||||||||  |||||||| | ||||| |||||||| |||| |||||||||||  | ||||||||||||||||||    
T  6834268 gagaagaggagcaagctt-tagagtccggaatcatctattctaaggcaagggtgatactagctttctctaataatgagttgtataattctgaaa 6834176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 635004 - 635052
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||||||||||||||| |||||||||||  || |||||||||||||    
T  635004 taaggtaagggtgagactagctttctctaataataggttgtataattct 635052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 34392861 - 34392790
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||| ||||||||||||||||||||| |  ||| | ||| ||||||||||||| ||||| |||||||||||    
T  34392861 gagaatatgagcaatcttgtagagtccaaattcaaccaatctaaggtaagggtgtgactagctttctctaat 34392790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 45499634 - 45499564
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||| |||||||||  ||||| |||| ||||||||||||||||||| |||||||||||    
T  45499634 gagaagaggagcaagctt-tagagtccggaatcatataatctaaggtaagggtgagactagctttctctaat 45499564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 50001528 - 50001476
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| |||||||||||| |||||||||||  | |||||||||||    
T  50001528 taaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 50001476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 50544924 - 50544872
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  50544924 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 50544872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 8276079 - 8276112
Alignment:
Q  155 tttgggaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||| |||||||||||||||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttg 8276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 118
Target Start/End: Original strand, 22145665 - 22145718
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||| |||||||||||||||||  |  ||||| |||||||||||    
T  22145665 ttaaggtaagggtgggactaactttctctaataatgggttgtttaattctgaaa 22145718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 38056762 - 38056795
Alignment:
Q  155 tttgggaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||| |||||||||||||||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttg 38056795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 191; Significance: 1e-104; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 32099 - 31881
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  32099 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataatt 32000  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31999 ctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttga 31900  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||    
T  31899 atttgtgtagaagtgatgt 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 37406 - 37188
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37406 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaactttctctaattctaagttgtataatt 37307  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  37306 ctgaaattgagtttagcatgttataggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagcagaaaattcgttga 37207  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||    
T  37206 atttgtgtagaagtgatgt 37188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 77791 - 77574
Alignment:
Q  14 agaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattc 113  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  77791 agaagaatcttgtgagaagaggagtaatcttgtagagtctgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattc 77692  T
Q  114 tgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaa 213  Q
    ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  77691 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgttaatagagtagaaaatccgttgaa 77592  T
Q  214 tttgtgtagaagtgatgt 231  Q
    |||||||| || ||||||    
T  77591 tttgtgtataattgatgt 77574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 17045071 - 17044853
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17045071 gagaagaatcttgtgagaagatgagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 17044972  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  17044971 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttga 17044872  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  17044871 atttgtgtagaattgatgt 17044853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 22306530 - 22306746
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22306530 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 22306629  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22306630 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 22306729  T
Q  213 atttgtgtagaagtgat 229  Q
    ||||||| | |||||||    
T  22306730 atttgtgcataagtgat 22306746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 11259536 - 11259318
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11259536 gagaagaatcttgcgagaagaggagcaatcttgtagagtccgattatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 11259437  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| ||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  11259436 ctgaaattgaatttagcatgttgtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgttaataaagtagaaaatccgttga 11259337  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||    
T  11259336 atttgtgtagaagtgatgt 11259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 17047231 - 17047013
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17047231 gagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 17047132  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17047131 ctgaaattgagtttagcatgttgtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgttaatagagtaaaaaatccgttga 17047032  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  17047031 atttgtgtagaattgatgt 17047013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 17539211 - 17538993
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17539211 gagaagaatcttgtgagaagaggagtaatcttgtagaatccgatcatctaatttaaggtaagggtgagactaactttatctaattctaagttgtataatt 17539112  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  17539111 ctgaaattgattttatcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgttaatagagtagaaaatctgttga 17539012  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  17539011 atttgtgtagaattgatgt 17538993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 17694172 - 17693954
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17694172 gagaagaatcttgcgagaagaggagcaatcttgtagagtccgatcatctaatttaatgtaagggtgagactaactttctctaattctaagttgtataatt 17694073  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    || ||||||| |||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||||    
T  17694072 ctaaaattgagtttagcatgttgtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattgatcgttaatagagtagaaaatccgttga 17693973  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  17693972 atttgtgtagaattgatgt 17693954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 41172318 - 41172534
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| |    
T  41172318 gagaagaatcttgtgacaagatgagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctacttataagttgtataact 41172417  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  41172418 ctgaaattgagtttagcatgttgtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgttaatagagtagaaaatttgttga 41172517  T
Q  213 atttgtgtagaagtgat 229  Q
    |||||||||||| ||||    
T  41172518 atttgtgtagaattgat 41172534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 240
Target Start/End: Complemental strand, 49900818 - 49900608
Alignment:
Q  30 aagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagc 129  Q
    |||| ||| ||||| |||||| ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  49900818 aagaggagtaatctcgtagagaccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaattgagtttagc 49900719  T
Q  130 atgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgat 229  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  49900718 atgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgat 49900619  T
Q  230 gtccatctcat 240  Q
    || ||| ||||    
T  49900618 gttcatatcat 49900608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 39 - 231
Target Start/End: Original strand, 17518846 - 17519038
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtat 138  Q
    |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||     
T  17518846 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17518945  T
Q  139 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17518946 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17519038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 39 - 231
Target Start/End: Original strand, 17533708 - 17533900
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtat 138  Q
    |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||     
T  17533708 aatcttctagagtccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaattgactttagaatgttgtag 17533807  T
Q  139 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17533808 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 17533900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 35354707 - 35354489
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||    
T  35354707 gagaagaatcttgtgataagaggagcaatcttgtagagtccaatcatctaatttaagctaagtgtgggactaactttctctaattttaagttgtataatt 35354608  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||| |||||  ||||||||||||||||||||    
T  35354607 ctgaaattgagtttagcatgttgttggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgttggtagagtagaaaatccgttga 35354508  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  35354507 atttgtgtagaattgatgt 35354489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 40812931 - 40812720
Alignment:
Q  16 aagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg 115  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||    || ||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  40812931 aagaatcttgtgagaagatgaacaattttgtagagttcgatca----atctaaggtaagggtgggactaactttctctaattctaagttgcataattctg 40812836  T
Q  116 aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 215  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40812835 aaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgttaatagagtagaaaatccgttgaatt 40812736  T
Q  216 tgtgtagaagtgatgt 231  Q
    ||||||||| ||||||    
T  40812735 tgtgtagaattgatgt 40812720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 40808048 - 40807883
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  40808048 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 40807949  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  40807948 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 40807883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 15931455 - 15931672
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  15931455 gagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcatttaatttaaggtaaaggtgagactaactttctctaattctaagt-gtataatt 15931553  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    ||||||| || ||||||||||| || |||||||||||| |||||| |||||||||||| ||||||||||||  || ||||||||||||||||| ||||||    
T  15931554 ctgaaatagagtttagcatgttttaggttgtagttatgagaattttggaattaggtttcgaagttgtaattaattattaatagagtagaaaattcgttga 15931653  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  15931654 atttgtgtagaattgatgt 15931672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 215
Target Start/End: Complemental strand, 14508952 - 14508749
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14508952 gagaataatcttgtgagaagaagagtaatcttgtagagtccgatcatctaatttatggtaagggtgagactaactttctctaattctaagttgtataatt 14508853  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtttt-gaagttgtaattggttgttaatagagtagaaaatccgttg 211  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||  | |||||||| |||| | ||    
T  14508852 ctgaaattgaggttagcatgttgtaggttgtagttatgggaattttggaattaggttttggaagttgtaattggttgtagaaagagtagataatctgatg 14508753  T
Q  212 aatt 215  Q
    ||||    
T  14508752 aatt 14508749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 44274470 - 44274305
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  44274470 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 44274371  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
      |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  44274370 tattttgaagttgtaattggttgttaatagagtagaaaattcattgaatttgtgtagaattgatgt 44274305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 81 - 231
Target Start/End: Original strand, 50348041 - 50348191
Alignment:
Q  81 actaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgta 180  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  50348041 actaactttctctaattctaagttgtataattttaaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgta 50348140  T
Q  181 attggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  50348141 attggttgttaatagagtagaaaatctgttgaatttgtgtagaattgatgt 50348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 10311575 - 10311415
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 10311476  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10311475 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 10311415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 10563760 - 10563596
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||  |||||||||||| |||||||||||||    
T  10563760 taaggtaatggtgggactaactttctctaattttaagttgtataattatgaaattgagtttagcatgttgtagtttgtagttatggaaatttgggaatta 10563661  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||    
T  10563660 ggttttgaagttgtaattggttgttaatagagtagaaaagccgttgaatttg-gtagaattgatgt 10563596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 13 - 129
Target Start/End: Complemental strand, 17541539 - 17541423
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  17541539 gagaagaatcttgtgagaagaggagcaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 17541440  T
Q  113 ctgaaattgattttagc 129  Q
    |||||||||| ||||||    
T  17541439 ctgaaattgagtttagc 17541423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 51 - 188
Target Start/End: Complemental strand, 11563792 - 11563654
Alignment:
Q  51 tccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttat 149  Q
    |||||||||||||| ||||||||||||| ||||||| |||||||||||||||| ||||||||||| ||||  | |||| || |||||| ||||||||| |    
T  11563792 tccgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagtttt 11563693  T
Q  150 gggaatttgggaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  11563692 gggaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 19568208 - 19568366
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |   |||| || |||||| ||||||||| |||||||||||||||||    
T  19568208 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactagatttaacaggttgtaggttgtagttttgggaatttgggaatta 19568307  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    || || ||||||||||||||| |||   | |||||| ||||||||||||  ||||||||    
T  19568308 gggttagaagttgtaattggtagttgtaatagtagagaatccgttgaatcggtgtagaa 19568366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 91 - 183
Target Start/End: Original strand, 35064566 - 35064658
Alignment:
Q  91 tctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaatt 183  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  35064566 tctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 9510916 - 9511062
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||  |||||||| |||||||||| ||||||    
T  9510916 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9511015  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    ||||| |||||||||||||||||||   | ||||||||||| |||||    
T  9511016 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9511062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 9518891 - 9519037
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||  |||| || || |||  |||||||| |||||||||| ||||||    
T  9518891 taaggtaagggtgaaactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtagattgtagttttgggaatttgagaatta 9518990  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    ||||| |||||||||||||||||||   | ||||||||||| |||||    
T  9518991 ggtttagaagttgtaattggttgttttaatagtagaaaatctgttga 9519037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 186
Target Start/End: Complemental strand, 33565139 - 33565018
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||| |||| |||| ||||||||||| ||||    
T  33565139 taaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttgggaatttggaaatt 33565040  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||||||||||    
T  33565039 aggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 188
Target Start/End: Original strand, 45530553 - 45530725
Alignment:
Q  16 aagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg 115  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | || ||||||| ||   |||||||||| | ||| ||||||    
T  45530553 aagaatcttgtgagaaaaggagcaatcttgtagagtccgatcatctaatttaaggtaa-gatgggactaacatttaataattctaag-tatatgattctg 45530650  T
Q  116 -aaattgattttagcatgttgtatgttgtagttatgggaatttg-ggaattaggttttgaagttgtaattggttg 188  Q
     ||||||| |||| || |||||  ||||||||| |||||||||| | ||||||| || |||||||||||||||||    
T  45530651 aaaattgaatttaacaggttgtgggttgtagttttgggaatttgcgaaattagggttagaagttgtaattggttg 45530725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 170
Target Start/End: Complemental strand, 16050979 - 16050875
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||  |||| || |||||||||||||||| || | ||||| ||||||    
T  16050979 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaattgggtttaacaagttgtatgttgtagttttgaggatttgagaatta 16050880  T
Q  166 ggttt 170  Q
    |||||    
T  16050879 ggttt 16050875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 42323971 - 42324094
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| || | ||||| |||||||||||||||||||| |||| |||  ||||||||| ||||||||| ||||||||||| ||||    
T  42323971 taaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttgggaatttggaaatt 42324070  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    ||| || |||||||||||||||||    
T  42324071 agggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 35960928 - 35961049
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| || |||||||||||||||||| || ||||||||||| ||||||| |||| || |||||| |||| |||| ||| ||||||| ||||    
T  35960928 taaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggttgaagttttggaaatttggaaatt 35961027  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||||||||||    
T  35961028 aggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 15566823 - 15566744
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| |||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15566823 aatcttgttgagtccgatcatgtaatctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 231
Target Start/End: Original strand, 35064681 - 35064745
Alignment:
Q  167 gttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  35064681 gttttgaagttgtaattggttgttaatatagtagaaaatccgttgaatttgtgtagaattgatgt 35064745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 5200277 - 5200335
Alignment:
Q  173 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5200277 aagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5200335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 13185947 - 13185834
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattct-gaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| |||||||||||||||||| |||||  |||||||||  |||| || |||| || |||||| ||||||||| ||| ||||||||||||    
T  13185947 taaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttggaaatttgggaatt 13185848  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  13185847 aggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 49968858 - 49968981
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    |||||||||| ||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||||||  |||||||| || ||||||||||||    
T  49968858 ttaaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttgagaatttgggaat 49968956  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||||||  ||||||||||||||||    
T  49968957 taggtttataagttgtaattggttg 49968981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 50347604 - 50347656
Alignment:
Q  35 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 87  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50347604 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaact 50347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 50350763 - 50350846
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| || || | |||||||||||||||||||||| ||||||||||||| ||||||| |||| ||||    
T  50350763 gagaagaatcttgtgagaagaggaacagtgttgtagagtccgatcatctaatctaaggtaagggtgggactaaccttctttaat 50350846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 14152346 - 14152451
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||   |||  ||||||||||||| ||||| |||||||||||  | |||||||| |||    
T  14152346 gagaagaatcttgtgagaagaggagcaatcttgtatagttcgatccattaacctaaggtaagggtgggactagctttctctaataatgagttgtatcatt 14152445  T
Q  113 ctgaaa 118  Q
    ||||||    
T  14152446 ctgaaa 14152451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 13 - 73
Target Start/End: Original strand, 17325568 - 17325628
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaa 73  Q
    ||||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  17325568 gagaagaatcttgtgagaagaggagtaatcttgtagagtccaatcatctaatttaaggtaa 17325628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 24177736 - 24177840
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||| |||||||||||||| |||||||||||||||||||| ||  ||||  | || ||| ||||||||| ||| |||||||||||||    
T  24177736 taaggtaagggtgggacaaactttctctaattataagttgtataattctgaaactggatttaataggtggtaggttgtagttttggaaatttgggaatta 24177835  T
Q  166 ggttt 170  Q
     ||||    
T  24177836 tgttt 24177840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 11885560 - 11885658
Alignment:
Q  69 ggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattagg 167  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||| ||||||||| |||||||||| ||||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgagaattagg 11885658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 83 - 188
Target Start/End: Complemental strand, 37039085 - 37038978
Alignment:
Q  83 taactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttggg-aattaggttttgaagttgta 180  Q
    |||| |||| ||||| |||||||||||||||||||| |||  |||| ||||||||| ||||||||| |||||||||||| ||||||| ||  ||||||||    
T  37039085 taacattctttaattataagttgtataattctgaaaattggatttaacatgttgtaggttgtagttttgggaatttgggaaattagggttaaaagttgta 37038986  T
Q  181 attggttg 188  Q
    ||||||||    
T  37038985 attggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 96
Target Start/End: Complemental strand, 6159484 - 6159427
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||    
T  6159484 aatcttgtagagtccgatcatctaatctaaggtaagggtgagactcgctttctctaat 6159427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 15446868 - 15446920
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  15446868 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15446920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 14641509 - 14641596
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||| || || |||||||||||  |  |||||||||||||    
T  14641509 gagaagaggagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggattagctttctctaataatgggttgtataattct 14641596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 12509350 - 12509431
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||||||||| ||| ||| |||| |||||||||||||||||||||||||||||  |||| ||||| ||| | |||||||    
T  12509350 taaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaattggatttaacatgtggtaggatgtagtt 12509431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 5200243 - 5200284
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgta 107  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  5200243 taaggtaagggtgggactaactttctctaattctaagttgta 5200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 53646032 - 53646089
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||| |||| ||||    
T  53646032 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaaccttctttaat 53646089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 36528919 - 36528851
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgtt 134  Q
    ||||||||||||| || |||||||||||||||||||||  ||||||||||| ||||  |||| ||||||    
T  36528919 taaggtaagggtgggattaactttctctaattctaagtaatataattctgagattgggtttaacatgtt 36528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 22652826 - 22652773
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  22652826 ttaaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaa 22652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 167
Target Start/End: Original strand, 22758835 - 22758935
Alignment:
Q  67 aaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||| ||| ||||| || | ||||||||||||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgaggatttgggaatta 22758933  T
Q  166 gg 167  Q
    ||    
T  22758934 gg 22758935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 12917265 - 12917336
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||||||  ||| | ||| |||| |||||||| |||||||||||||||||    
T  12917265 gagaagaggagcaagcttgtagagtccgaattcaaccaatctaagataagggtgggactaactttctctaat 12917336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 169
Target Start/End: Original strand, 14250085 - 14250185
Alignment:
Q  69 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggt 168  Q
    |||||| ||| ||||||| |||| |||||||||||||| ||||| | ||||||  |||| ||||||||| | ||||||| |||  ||||  |||||||||    
T  14250085 ggtaagagtgggactaaccttctttaattctaagttgtgtaattttcaaattggatttaacatgttgtaagatgtagttttggagatttaagaattaggt 14250184  T
Q  169 t 169  Q
    |    
T  14250185 t 14250185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 16979964 - 16979912
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| |||||||||||| |||||||||||  | |||||||||||    
T  16979964 taaggtaagggtgggactaactttctttaattctaagtattttaattctgaaa 16979912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 17208576 - 17208524
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  17208576 taaggtaagggtgggactagctttctctaataatgagttgtataattctgaaa 17208524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 96
Target Start/End: Original strand, 3527117 - 3527187
Alignment:
Q  28 agaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||| |||||| ||||||||||||||  ||| || || ||||||||||||| ||||| |||||||||||    
T  3527117 agaagaggagcaaacttgtagagtccgaattcaacttatctaaggtaagggtgggactagctttctctaat 3527187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 6820243 - 6820192
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttc 90  Q
    ||||||||||||||| ||||| |||  |||||||||||||| ||||||||||    
T  6820243 aatcttgtagagtccaatcatttaacctaaggtaagggtgatactaactttc 6820192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 29907702 - 29907639
Alignment:
Q  55 atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||| ||||||||||||| ||||| |||||| ||||  |  |||||||||||||||||    
T  29907702 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29907639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 29948868 - 29948805
Alignment:
Q  55 atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||| ||||||||||||| ||||| |||||| ||||  |  |||||||||||||||||    
T  29948868 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29948805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 29998022 - 29997959
Alignment:
Q  55 atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||| ||||||||||||| ||||| |||||| ||||  |  |||||||||||||||||    
T  29998022 atcatctaatctaaggtaagggtgggactagctttctttaatattgggttgtataattctgaaa 29997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Original strand, 6804882 - 6804957
Alignment:
Q  56 tcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatg 132  Q
    |||||||| |||||||||||||||||||||| |||  ||||||| || | | | ||||||||||||| |||| ||||    
T  6804882 tcatctaaattaaggtaagggtgagactaaccttcaataattctgag-tatgtgattctgaaattgaatttaacatg 6804957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 22146832 - 22146880
Alignment:
Q  141 tgtagttatgggaatttgggaa-ttaggttttgaagttgtaattggttg 188  Q
    ||||||| |||||||||||||| ||||| || |||||||||||||||||    
T  22146832 tgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 22146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 227
Target Start/End: Complemental strand, 19140869 - 19140656
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  19140869 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacta-ctttctctaattctaagttgtataatt 19140771  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19140770 ctgaaattgagtttagcaagttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 19140671  T
Q  213 atttgtgtagaagtg 227  Q
    |||||||||||||||    
T  19140670 atttgtgtagaagtg 19140656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 42817854 - 42818072
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  42817854 gagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggacttactttctctaattctaagttgtataatt 42817953  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  42817954 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgttaataaagtagaaaatccgttga 42818053  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  42818054 atttgtgtagaattgatgt 42818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 39935954 - 39936175
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||| |||||||||| || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  39935954 gagaagaatcatgtgagaagaagaacagtcttgtagagtccgatcatctaatttaaggtaagggtgggattaactttctctaattctaagttgtataatt 39936053  T
Q  113 ctgaaattgattttagca---tgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgt 209  Q
     ||||||||| |||||||   ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39936054 atgaaattgagtttagcatgttgttgtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgt 39936153  T
Q  210 tgaatttgtgtagaagtgatgt 231  Q
    |||||||||||| || ||||||    
T  39936154 tgaatttgtgtacaattgatgt 39936175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 66 - 240
Target Start/End: Original strand, 20083638 - 20083812
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgggaatta 20083737  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtccatctcat 240  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||||    
T  20083738 ggttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgttcatatcat 20083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 53 - 231
Target Start/End: Complemental strand, 5761598 - 5761421
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatggg 152  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  5761598 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagt-gtataattttgaaattgagtttagcatgttgtaggttgtagttatggg 5761500  T
Q  153 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  5761499 aatttgggaattaggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 70 - 231
Target Start/End: Original strand, 6573060 - 6573221
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||    
T  6573060 gtaagggtgagactaactttctctaattctaagttgtataattttgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatgaggtt 6573159  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  6573160 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 6573221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 80 - 231
Target Start/End: Original strand, 5082226 - 5082377
Alignment:
Q  80 gactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgt 179  Q
    ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5082226 gactaactttctctaattctaagttgtataattatgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgt 5082325  T
Q  180 aattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5082326 aattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 5082377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 6202824 - 6202664
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||| ||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaattgaattttgcatgttgtaggttgtagttatgagaatttgagaattaggtt 6202725  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6202724 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagtgatgt 6202664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 6101753 - 6101918
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |    
T  6101753 taaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaattgtgtttagcatgttgtaggttgtagttatgggaatttgggaatca 6101852  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| | ||||||    
T  6101853 ggttttgaagttataattggttgttaatagagtagaaaatctattgaatttgtgtagtattgatgt 6101918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 37292753 - 37292593
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 37292654  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  37292653 ttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttg-gtagaagtgatgt 37292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 18761553 - 18761448
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  18761553 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgcgactaactttctctaattctaagtggtataatt 18761454  T
Q  113 ctgaaa 118  Q
    ||||||    
T  18761453 ctgaaa 18761448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 20397510 - 20397656
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||        || |||||||||||    
T  20397510 taaggtaagggtgggattaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgt-tgttgt--------gattttgggaatta 20397600  T
Q  166 ggttttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttgtgt 220  Q
    |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  20397601 ggttttaaagttgtaattaggttgttaatagagtagaaaatccattgaatttgtgt 20397656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 130 - 240
Target Start/End: Original strand, 20178593 - 20178704
Alignment:
Q  130 atgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaa-ttggttgttaatagagtagaaaatccgttgaatttgtgtagaagtga 228  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||    
T  20178593 atgttgtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattga 20178692  T
Q  229 tgtccatctcat 240  Q
    ||| ||| ||||    
T  20178693 tgttcatatcat 20178704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 113
Target Start/End: Original strand, 22258253 - 22258353
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||  | ||||||||||||    
T  22258253 gagaagaatcttgtgagaagaagagcaatcttgtagtgtccgatcatctaatttaaggtaagggtgagactagctttctctaataatgagttgtataatt 22258352  T
Q  113 c 113  Q
    |    
T  22258353 c 22258353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 36306102 - 36306019
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  36306102 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgagactagctttctctaat 36306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 22532132 - 22532290
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| ||| || ||||||||||    
T  22532132 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22532231  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||    
T  22532232 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaa 22532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 22536817 - 22536975
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| ||| || ||||||||||    
T  22536817 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaaattgggaatta 22536916  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||  |||||||||||| |||||   | ||||||||||  |||||||| ||||||||    
T  22536917 ggtttaaaagttgtaattgattgttttaatagtagaaaatttgttgaattggtgtagaa 22536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 21579153 - 21579236
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  21579153 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgtgactaaccttctttaat 21579236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 45469219 - 45469342
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||| ||| ||||| ||  ||||||||||||    
T  45469219 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttatagttttgtaaatttgggaatt 45469318  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    | |||| |||||||||||||||||    
T  45469319 atgtttagaagttgtaattggttg 45469342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 51 - 188
Target Start/End: Original strand, 20022025 - 20022155
Alignment:
Q  51 tccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttat 149  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||| |||| || |||| || |||||| ||||||||       
T  20022025 tccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagt--- 20022121  T
Q  150 gggaatttgggaattaggttttgaagttgtaattggttg 188  Q
         |||||||||||||||| |||||||||||||||||    
T  20022122 -----tttgggaattaggtttagaagttgtaattggttg 20022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 23943773 - 23943866
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgt 106  Q
    ||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| |  || |||||||||||||||||||||    
T  23943773 gagaagaattttgtgagaagaggagcaatcttgtagagtccggtcatctaatttaaggtaagggtgggtatagctttctctaattctaagttgt 23943866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 31722493 - 31722661
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| |||||||| |||||||||||||||||||||||| |||||||| || |||| || |||| || |||||| ||||||||| ||||||||||| ||||    
T  31722493 taagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttgggaatttggaaatt 31722592  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtcca 234  Q
     ||||| ||||||||||||||||| |   ||||||| ||||| ||||||||  ||||||| | |||||||    
T  31722593 tggtttagaagttgtaattggttgatttaagagtag-aaatctgttgaattgatgtagaattaatgtcca 31722661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 17 - 96
Target Start/End: Original strand, 29762819 - 29762898
Alignment:
Q  17 agaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  29762819 agaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaaactaaccttctttaat 29762898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 36727038 - 36727151
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  |||| || |||||| ||||||||| | || ||||| |||||    
T  36727038 taaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttttgggatttgagaatt 36727137  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  36727138 aggtttagaagttg 36727151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18834526 - 18834444
Alignment:
Q  14 agaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||||| ||||| |||||||||||    
T  18834526 agaagaatcttgtgagaagaggggcaatcttgtagtgcccgatcatctaatttaaggtaagggtgggactagctttctctaat 18834444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 224
Target Start/End: Original strand, 39694281 - 39694435
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||| | ||||| |||||||||||| |||||||||| ||||||||| ||  |||| || |||||| ||||||||| ||||||||||||||||||| |    
T  39694281 gtaagggcgtgactagctttctctaattataagttgtatgattctgaaactggatttaacaagttgtaggttgtagttttgggaatttgggaattagggt 39694380  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    | || ||||||||| |||||    | |||||| |||| |||||||| ||||||||    
T  39694381 tagacgttgtaattagttgtcgtaatagtagagaatctgttgaattggtgtagaa 39694435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 17906849 - 17906953
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || |||||| ||||||||  |||| ||||| ||||||    
T  17906849 taaggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaagttgtaggttgtagtgttggggatttgagaatta 17906948  T
Q  166 ggttt 170  Q
    |||||    
T  17906949 ggttt 17906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 22317911 - 22318033
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || ||| || |||||||||  |||||||||||| ||    
T  22317911 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttctaggttgtagtttcgggaatttgggattt 22318009  T
Q  165 aggttttgaagttgtaattggttg 188  Q
    |||||| |||||||||||||||||    
T  22318010 aggtttagaagttgtaattggttg 22318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 4380604 - 4380669
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4380604 cgatcatctaacctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 4380669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 22208360 - 22208269
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| ||||||||| |||||| ||||||||||||| ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  22208360 gagaagaggagcaatctggtagagaccgatcatctaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 22208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 23899987 - 23900100
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||| ||||| |||||| |||| || |||||| | ||||||| |||| ||||| ||| |    
T  23899987 taaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtaggctgtagttttggggatttgagaact 23900086  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  23900087 aggtttagaagttg 23900100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 133
Target Start/End: Complemental strand, 23889851 - 23889784
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgt 133  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  23889851 taagctaagggtgagattaactttctctaattctaggttgtataattctgaaattgaatttaacatgt 23889784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 12037125 - 12037184
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaac 86  Q
    ||||||| ||||||||| |||||||||||||||||||| ||||||||||||| |||||||    
T  12037125 gagaagaggagcaatctcgtagagtccgatcatctaatataaggtaagggtgggactaac 12037184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 19700213 - 19700109
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||| | ||| |  |||| ||||||||| ||||||||| || | ||||| | |||    
T  19700213 taaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatttgaggatt 19700114  T
Q  165 aggtt 169  Q
    |||||    
T  19700113 aggtt 19700109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 23948315 - 23948211
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||  |||||| |||| |||||||||||||||| |||||| ||| ||  |||| || |||||| ||||||||| |||| ||||| |||||    
T  23948315 taaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 23948216  T
Q  165 aggtt 169  Q
    |||||    
T  23948215 aggtt 23948211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 22583660 - 22583727
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgt 133  Q
    ||||||||||||| || |||| |||| |||||||| ||||||||||||||||||||| |||| |||||    
T  22583660 taaggtaagggtgggattaacattctttaattctaggttgtataattctgaaattgaatttaacatgt 22583727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 136
Target Start/End: Complemental strand, 36305908 - 36305837
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 136  Q
    |||| ||||||||| || ||||||||| ||||| || ||||||||||| ||||||||| |||||||||||||    
T  36305908 ttaacgtaagggtgtgattaactttctttaattttaggttgtataattatgaaattgagtttagcatgttgt 36305837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 23419493 - 23419443
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga 116  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||    
T  23419493 taaggtaagggtgggactaaccttctttaattctaagttgtataattctga 23419443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 22254818 - 22254766
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| |||| ||||||||||||||||||||||||  |||||||||||||    
T  22254818 taaggtaatggtgggactaactttctctaattctaagtgttataattctgaaa 22254766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 22345257 - 22345186
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||| |  |||||||||| ||||||||||||| ||||| |||||||||||    
T  22345257 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22345186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 22356917 - 22356846
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||| |  |||||||||| ||||||||||||| ||||| |||||||||||    
T  22356917 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 22356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 26454760 - 26454708
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  26454760 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 26454708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 42265559 - 42265631
Alignment:
Q  116 aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 188  Q
    ||||||| |||| || |||||| ||||||||| ||||||||||||||||||| || ||||||| || ||||||    
T  42265559 aaattgaatttaacaagttgtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 17218755 - 17218649
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    ||||| |||||||| ||||||||||||||| ||||||||  |||||||||| |||||   |||||||  ||||| ||||| ||| || | ||||| ||||    
T  17218755 ttaagataagggtgggactaactttctctagttctaagtattataattctgaaaattagatttagcaatttgtaggttgttgttttgaggatttgagaat 17218656  T
Q  164 taggttt 170  Q
    |||||||    
T  17218655 taggttt 17218649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 17158963 - 17159000
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagt 103  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  17158963 taaggtaagggtgggactaactttctctaattctaagt 17159000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 21514756 - 21514695
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||||||| |||||||||||||| |||||  ||||||||||  | ||||||||||||||    
T  21514756 cgatcatctaacttaaggtaagggtgggactagatttctctaataatgagttgtataattct 21514695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 103
Target Start/End: Complemental strand, 23479134 - 23479097
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagt 103  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  23479134 taaggtaagggtgggactaactttctctaattctaagt 23479097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 36732399 - 36732464
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  36732399 cgatcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaa 36732464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 102
Target Start/End: Complemental strand, 19880874 - 19880838
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaag 102  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19880874 taaggtaagggtgggactaactttctctaattctaag 19880838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 34758915 - 34758875
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataa 110  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  34758915 gtaagggtgggactaactttctctaattctacgttgtataa 34758875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 95
Target Start/End: Complemental strand, 23884262 - 23884192
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaa 95  Q
    ||||||| |||||| ||||||||||| ||  ||||||||| ||||||||||| | ||||| ||||||||||    
T  23884262 gagaagaggagcaaacttgtagagtctgaattcatctaatctaaggtaagggcgggactagctttctctaa 23884192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 114
Target Start/End: Original strand, 22610226 - 22610315
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||| || ||| ||||||| ||||||  ||| | ||| ||||||||||||| |||||||||||||||||  | |||||||| |||||    
T  22610226 gagaagaggaacaagcttgtagggtccgaattcaaccaatctaaggtaagggtgggactaactttctctaataatgagttgtatgattct 22610315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 3273892 - 3273819
Alignment:
Q  116 aaattgattttagcatgttgtatgttgtagttatgggaatttggg-aattaggttttgaagttgtaattggttg 188  Q
    ||||||| |||| || |||||  ||||||||| |||||||||||| ||||||| || |||||||| ||||||||    
T  3273892 aaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaattagggttagaagttgtgattggttg 3273819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 12577931 - 12577880
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| |||||||||||||||||  | ||||||||||||| ||||    
T  12577931 taaggtaagggtgggactaactttctctaataat-agttgtataattccgaaa 12577880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 20879565 - 20879494
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||||||  ||| | ||| ||||||||||||| ||||||| |||| ||||    
T  20879565 gagaagaggagcaaacttgtagagtccgaattcaaccaatctaaggtaagggtgggactaaccttctttaat 20879494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 118
Target Start/End: Original strand, 25657518 - 25657566
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||| || |||||||||||||||||||||  | |||||||||||    
T  25657518 gtaagggtgggagtaactttctctaattctaagtattttaattctgaaa 25657566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 58851 - 58633
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||    
T  58851 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttgtacaatt 58752  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  58751 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 58652  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||| ||||| ||||||    
T  58651 atttgtatagaattgatgt 58633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 14 - 231
Target Start/End: Original strand, 416 - 633
Alignment:
Q  14 agaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattc 113  Q
    |||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  416 agaagaatcttgtgagaagaggaacaatcttgtagagtctgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataattc 515  T
Q  114 tgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaa 213  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  516 tgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaataagttgaa 615  T
Q  214 tttgtgtagaagtgatgt 231  Q
    ||||||||||| ||||||    
T  616 tttgtgtagaattgatgt 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 11222 - 11439
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11222 gagaagaatcttgtgagaaaa-gagtaatgttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtatattt 11320  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  11321 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgttaatagagtagaaaatccgttga 11420  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  11421 atttgtgtagaattgatgt 11439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 1310 - 1092
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||||||||  |||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1310 gagaagaatcttgtgagaagagtagcaattttgtagaatccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 1211  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1210 ctgaaattgagtttagcatgttgtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgttaatagaatagaaaatccgttga 1111  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  1110 atttgtgtagaattgatgt 1092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 21740 - 21958
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| ||    
T  21740 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaatggtgggactaaatttctctaattctaagttgtatagtt 21839  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||    
T  21840 ctgaaattgaatttagcatgttgtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtaaaaaataagttga 21939  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  21940 atttgtgtagaattgatgt 21958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 58834 - 58880
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcat 59  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  58834 gagaagaatcttgtgagaagaggagtaatcttgtagagtccgatcat 58880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 171; Significance: 6e-92; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 13 - 231
Target Start/End: Complemental strand, 34444 - 34226
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  34444 gagaagaatcttgtgagaagagtagcaattttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaatttgtttaatt 34345  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttga 212  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  |||||    
T  34344 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgttaatagagtagaaaatttgttga 34245  T
Q  213 atttgtgtagaagtgatgt 231  Q
    |||||||||||| ||||||    
T  34244 atttgtgtagaattgatgt 34226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 6002 - 5921
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| |||| ||||||||| | |||||||    
T  6002 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaattgaatttaacatgttgtaggatgtagtt 5921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 154; Significance: 8e-82; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 39 - 224
Target Start/End: Original strand, 12506 - 12691
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtat 138  Q
    ||||||||||||||||||||||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||     
T  12506 aatcttgtagagtccgatcatctaatccaaggtaagggtgggaataactttctctaattctaagttgtataattctgaaattgagtttagcatgttatag 12605  T
Q  139 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12606 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtatagaa 12691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 69 - 231
Target Start/End: Complemental strand, 5432 - 5270
Alignment:
Q  69 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggt 168  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaattaagtttagcatgttgtaggttgtagttatgggaatttgggaattaggt 5333  T
Q  169 tttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  5332 tttgaagtcgtaattggttgttaatagagtagaaaatcctttgaatttgtgtagaattgatgt 5270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 190 - 25
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  190 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 91  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  90 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 25  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 2e-76; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 39 - 231
Target Start/End: Original strand, 21300017 - 21300209
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtat 138  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||     
T  21300017 aatcttgtagagtctgatcatctaatctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaattaagtttagcatgttgtag 21300116  T
Q  139 gttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  21300117 gtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgttaatagagtagaaaatctgttaaatttgtgtagaattgatgt 21300209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 30 - 231
Target Start/End: Complemental strand, 19921732 - 19921525
Alignment:
Q  30 aagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgaga------ctaactttctctaattctaagttgtataattctgaaattgat 123  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||||| ||      ||| |||||||||||||||||||||||||||||||||||||     
T  19921732 aagatgagcaatctcgtagagaccgatcatctaatctaaggtaagggtgggagtgggactacctttctctaattctaagttgtataattctgaaattgag 19921633  T
Q  124 tttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 223  Q
    |||| ||||||||| |||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  19921632 tttaacatgttgtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgttaatagagtagaaaatctgttgaatttgtgtaga 19921533  T
Q  224 agtgatgt 231  Q
    | ||||||    
T  19921532 attgatgt 19921525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 231
Target Start/End: Complemental strand, 7485050 - 7484890
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||| ||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttgagaattaggtt 7484951  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  7484950 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttg-gtagaagagatgt 7484890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 20566598 - 20566448
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||        |||||    
T  20566598 taaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatggg--------aatta 20566507  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  20566506 ggttttgaagttgtaattggttgttaatagaatagaaaatccgtagaatttgtgtagaa 20566448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 57 - 215
Target Start/End: Complemental strand, 31622178 - 31622028
Alignment:
Q  57 catctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatt 156  Q
    |||||||| ||||||||||||| || ||||||||||||||| || ||||||||||||||||||||| |||||||||||||   |||||        ||||    
T  31622178 catctaatctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgttgtttgta--------aatt 31622087  T
Q  157 tgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 215  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  31622086 tgggaattaggttttgaagtcgtaattggttgttaatagagtagaaaatccattgaatt 31622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 190
Target Start/End: Original strand, 36508628 - 36508757
Alignment:
Q  61 taatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttggg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| ||| ||||||||    
T  36508628 taatttaaggtaagggtgagactaactttctctaattctaagttgtatgattctgaaaatggatttaacaggtggtaggttgtagttttggaaatttggg 36508727  T
Q  161 aattaggttttgaagttgtaattggttgtt 190  Q
    ||||| |||| |||||||||||||||||||    
T  36508728 aattatgtttagaagttgtaattggttgtt 36508757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 23199154 - 23199259
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||    
T  23199154 gagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataatt 23199253  T
Q  113 ctgaaa 118  Q
    ||||||    
T  23199254 ctgaaa 23199259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 21398591 - 21398674
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| || || |||||||||||    
T  21398591 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatctaaggtaagggtgggattagctttctctaat 21398674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 31457012 - 31456888
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||||||||||||||||||||| ||||| |||| ||||||||| ||  |||| ||    ||| ||||||||| ||| ||||||| |||||    
T  31457012 taaggtaagggtgagactaactttctctaattttaagtggtatgattctgaaactggatttaacacaaggtaggttgtagttttggaaatttggaaatta 31456913  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| |||||||||||||||||||    
T  31456912 ggtttagaagttgtaattggttgtt 31456888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 21617928 - 21618047
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattct-gaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||| |||  ||||||| |||| || |||||| ||||||||| |||||||||| |||||    
T  21617928 taaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttgggaatttgagaatt 21618027  T
Q  165 aggttttgaagttgtaattg 184  Q
    ||| || ||||||| |||||    
T  21618028 agggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 6551290 - 6551342
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6551290 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 6551342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 189
Target Start/End: Complemental strand, 17876268 - 17876132
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgg 151  Q
    |||||||||||| ||| |||||||||| |||||| |||  ||||||| |||  ||| ||||||||| |||  |||| || || ||| ||||||||| ||     
T  17876268 cgatcatctaatctaatgtaagggtgaaactaaccttcaataattctgagta-tatgattctgaaaattggatttaacaggtggtaggttgtagttctga 17876170  T
Q  152 gaatttgggaattaggttttgaagttgtaattggttgt 189  Q
     |||||||||||||||||| ||||||||||||||||||    
T  17876169 aaatttgggaattaggtttagaagttgtaattggttgt 17876132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 170
Target Start/End: Original strand, 20469176 - 20469281
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||| |||| ||||||  |||| || |||||| ||||||||| |||| | ||| |||||    
T  20469176 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggacttgagaatt 20469275  T
Q  165 aggttt 170  Q
    ||||||    
T  20469276 aggttt 20469281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 22111881 - 22111762
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| ||||||||| || ||||||||||||||| |  ||||||||||| ||||||||| |||||||||||||   ||||   | || ||||||| |||||    
T  22111881 ttaacgtaagggtgggattaactttctctaatttttggttgtataattttgaaattgagtttagcatgttgttgtttgtgaatttgcgaatttgagaatt 22111782  T
Q  165 aggttttgaagttgtaattg 184  Q
    ||||||| |||| |||||||    
T  22111781 aggttttcaagtcgtaattg 22111762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 188
Target Start/End: Original strand, 21405628 - 21405751
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttggg-aat 163  Q
    ||||||||||||||||||||| ||   ||||||| |||  ||| ||||||||| |||| |||| || |||||  ||||||||| |||||||||||| |||    
T  21405628 taaggtaagggtgagactaacctttaataattctgagta-tatgattctgaaaattgaatttaacaggttgtgggttgtagttttgggaatttgggaaat 21405726  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  21405727 tagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 10954141 - 10954038
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||| |||  |||||||||||||| ||||| ||||||||  |||| ||||||||| | ||||||| |||  ||||  ||||||    
T  10954141 taaggtaagggtgggactaaccttccttaattctaagttgtgtaattatgaaattggatttaacatgttgtaggatgtagttttggagatttaagaatta 10954042  T
Q  166 ggtt 169  Q
    ||||    
T  10954041 ggtt 10954038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 118
Target Start/End: Complemental strand, 30616680 - 30616614
Alignment:
Q  52 ccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||| |  ||| |||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  30616680 ccgatcatcaatattatggtaagggtgggactgactttctctaattctaagttgtatgattctgaaa 30616614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 32607280 - 32607346
Alignment:
Q  30 aagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||| ||||||||| |||||| ||||| ||||||| ||||||||||||| ||||| |||||||||||    
T  32607280 aagaggagcaatctcgtagagaccgattatctaatctaaggtaagggtgggactagctttctctaat 32607346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 266091 - 266038
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  266091 ttaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 266038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 174
Target Start/End: Original strand, 10774664 - 10774771
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||  |||||||| || ||||| |||||||    
T  10774664 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatt 10774761  T
Q  165 aggttttgaa 174  Q
    ||| ||||||    
T  10774762 agggtttgaa 10774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 31251891 - 31252011
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||||||||||||| | |||  | ||  |||||  ||||||||||||||||  |||| || ||| || ||||||||| | |||||||| |||||    
T  31251891 ttaaggtaagggtgagactatcattcagtgatcttaagtc-tataattctgaaattggatttaacaggttataggttgtagttttaggaatttgagaatt 31251989  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||| ||||||||    
T  31251990 aggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 17011780 - 17011728
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  17011780 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 17011728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 26762504 - 26762424
Alignment:
Q  16 aagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||  |||||||||||||||| |||||   |||  ||||||||||||| ||||||| |||| ||||    
T  26762504 aagaatcttgtgagaagagaagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 26762424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 22111764 - 22111715
Alignment:
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    ||||||| |||||||||||||||||||| |||||||||  ||||||||||    
T  22111764 ttgaagtcgtaattggttgttaatagagcagaaaatccaatgaatttgtg 22111715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 8503857 - 8503913
Alignment:
Q  35 gagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttct 91  Q
    ||||||||| |||||| ||||| ||||||| ||||||||||||| ||||||| ||||    
T  8503857 gagcaatctcgtagagaccgattatctaatataaggtaagggtgggactaaccttct 8503913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 18744926 - 18744874
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| |||||||||||||||||  |  |||||||||||||||||    
T  18744926 taaggtaagggtgggactaactttctctaataatgggttgtataattctgaaa 18744874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 29448892 - 29448840
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| | |||||||||||||||||||||||||||  | |||||||||||    
T  29448892 taaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaa 29448840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 30138059 - 30138098
Alignment:
Q  151 ggaatttgggaattaggttttgaagttgtaattggttgtt 190  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  30138059 ggaaattgggaattaggtttagaagttgtaattggttgtt 30138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 25249828 - 25249910
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||||||||  ||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||| ||| |||||    
T  25249828 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25249910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 25313612 - 25313694
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagtt 147  Q
    ||||||||||||  ||||||| |||| ||||| |||||| |||||||||| ||||||  |||| ||||||||| ||| |||||    
T  25313612 taaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggttatagtt 25313694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 570 - 405
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||||||| |||||    
T  570 taaggtaagggtgagactaactttctctaattctaagttgtatcattctgaaattgagtttagcatgttgtaggttgtagttatgagaatttggaaatta 471  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  470 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 142; Significance: 1e-74; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 3234 - 3069
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  3234 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaattgactttagtatgttgtaggttgtagttatgggaatttgggaatta 3135  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3134 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 3069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 124 - 231
Target Start/End: Complemental strand, 2558 - 2451
Alignment:
Q  124 tttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 223  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2558 tttagcatgttgtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtaga 2459  T
Q  224 agtgatgt 231  Q
    | ||||||    
T  2458 attgatgt 2451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 13 - 170
Target Start/End: Original strand, 24078 - 24235
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24078 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 24177  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttt 170  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  24178 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 78132 - 78298
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  78132 gagaataatcttgtgagaagaggagcaatcttgtagagtacgatcatctaatttaaggtaagggtgggactaactttctctaattctaagttgtataatt 78231  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgt 179  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  78232 ctgaaattgagtttagcatgttgtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 696 - 861
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||    
T  696 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttaacatgttgtaggttgtagttatgggaatttgggaatta 795  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  796 ggttttgaagttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 13392 - 13557
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  13392 taaggtaagggtgggactaactttctctaattccaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttttgggaatttgggaatta 13491  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  13492 ggttttgaagttataattggttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 13557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 168999 - 169164
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  168999 taaggtaggggtgggactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 169098  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  169099 ggttttgaacttgtaattagttgttaatagagtagaaaatccgttgaatttgtgtagaattgatgt 169164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 62 - 231
Target Start/End: Complemental strand, 143667 - 143498
Alignment:
Q  62 aatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttggga 161  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||   |||||||||    
T  143667 aatttaaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttattttaatttggga 143568  T
Q  162 attaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  143567 attatgttttgaagttgtaattggttgttaatagagtagaaaattcgttgaatttgtgtagaattgatgt 143498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 174326 - 174243
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||   |||  ||| ||||||||| ||||||| |||| ||||    
T  174326 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaagtaagggtgggactaaccttctttaat 174243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 1217 - 1052
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  1217 taaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaattgaatttagcatgttttaggttgtagttatgggaatttgggaatta 1118  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  1117 ggttttgaagttgtaattggttgttaatagaatagaaaatccgttgaatttgtgtagaattgatgt 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 146775 - 146610
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  146775 taaggtatgggtgggactaacttactctaattctaagttgtataattctgaaattgagtttagcatgttgtaggttgtagttatgggaatttgggaatta 146676  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  146675 ggttttgaagttataattggttgttaatagagtaggaaatccgttgaatttgtgtagaattgatgt 146610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 132
Target Start/End: Complemental strand, 22238 - 22163
Alignment:
Q  56 tcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatg 132  Q
    |||||||| |||||||||||||||||||||| |||  ||||||| || | | | ||||||||||||| |||| ||||    
T  22238 tcatctaaattaaggtaagggtgagactaaccttcaataattctgag-tatgtgattctgaaattgaatttaacatg 22163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 79151 - 78958
Alignment:
Q  16 aagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg 115  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79151 aagaattttgtgagaagaggagcaatcttgtagagttcgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg 79052  T
Q  116 aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatt 215  Q
    ||||||| ||||||||||       ||||||||        |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  79051 aaattgagtttagcatgt-------tgtagtta--------tgggaattaggttttgaagttgtaattggttgttaataaagtagaaaatccattgaatt 78967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 126; Significance: 4e-65; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 53 - 231
Target Start/End: Original strand, 328275 - 328455
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattct--aagttgtataattctgaaattgattttagcatgttgtatgttgtagttatg 150  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||| |  |||||||||||    
T  328275 cgatcatctaacctaaggtaagggtgggactaactttctctaattctctaagttgtataattctgaaattgagtttagcatgttgaagattgtagttatg 328374  T
Q  151 ggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgt 231  Q
    | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  328375 gaaatttgggaattaggtttcgaagttgtaattggttgttaatagagtagaaaatcagttgaatttgtgtagaattgatgt 328455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 75839 - 75691
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| ||||||||| || ||||||||||||||  || ||||||||||||||||||||| | |||||||||||   |||||  | || |||||||||||||    
T  75839 ttaacgtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagtgtagcatgttgttgtttgtaaatttgtgaatttgggaatt 75740  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    |||||      ||||||||||||||||||||| |||||||||| |||||||||||    
T  75739 aggtt------ttgtaattggttgttaatagaatagaaaatccattgaatttgtg 75691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 221
Target Start/End: Complemental strand, 72989 - 72841
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| ||| ||||| || |||||||||| |||  || ||||||||||||| ||||||| |||||       |||||||| |||| | ||||||| |||||    
T  72989 ttaacgtatgggtgggattaactttctccaatcttaggttgtataattctaaaattgagtttag-------tatgttgttgtta-gtgaatttgtgaatt 72898  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  72897 aggttttgaagttgtaattggttgttaatagaatagaaaatccattgaatttgtgta 72841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 110227 - 110121
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||||||| ||||||| |||| || |||||| ||||||||| |||| ||||| | ||    
T  110227 ttaacgtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttggggatttgaggat 110128  T
Q  164 taggttt 170  Q
    |||||||    
T  110127 taggttt 110121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 114
Target Start/End: Complemental strand, 73180 - 73091
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgat--catctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    ||||||| |||||| ||||||||||| ||   |||||||| ||||||||||||| |||||||||||||||||  | |||||||| |||||    
T  73180 gagaagaggagcaagcttgtagagtctgaaaccatctaatgtaaggtaagggtgggactaactttctctaataatgagttgtatgattct 73091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 205
Target Start/End: Original strand, 29573 - 29711
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  29573 taaggtaagggtgggactaactttctataattctaagttgtataattctgaaattgagtttagcatgtcgtaggttgtagttatgggaatttgggaatta 29672  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaat 205  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  29673 ggttttgaagttgtaattggttgtaaatag-gtagaaaat 29711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 21663 - 21539
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||| |||| ||  |||| ||  | |||  |||||||| ||| |||||||||||||    
T  21663 taaggtaagggtgggactagctttctctaattctaagttgtatgattcagaaactggatttaacagatggtagcttgtagttttggaaatttgggaatta 21564  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
     |||| |||||||||||||||||||    
T  21563 tgtttagaagttgtaattggttgtt 21539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956 (Bit Score: 105; Significance: 1e-52; HSPs: 2)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 2660 - 2524
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  2660 gagaagaatcttgtgagaagaggagcaatctcgtagagaccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataatt 2561  T
Q  113 ctgaaattgattttagcatgttgtatgttgtagttat 149  Q
    |||||||||| |||||||||||||| |||||||||||    
T  2560 ctgaaattgagtttagcatgttgtaggttgtagttat 2524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0956; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 90
Target Start/End: Original strand, 2084 - 2118
Alignment:
Q  56 tcatctaatttaaggtaagggtgagactaactttc 90  Q
    |||||||| ||||||||||||||||||||||||||    
T  2084 tcatctaaattaaggtaagggtgagactaactttc 2118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 35542 - 35418
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||  ||||| |||||||||||||||||    
T  35542 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgagtttagcatgttgtaggt--tagttttgggaatttgggaatta 35445  T
Q  166 ggttttgaagttgtaattggttgttaa 192  Q
    ||||||||||| |||||||||||||||    
T  35444 ggttttgaagtcgtaattggttgttaa 35418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 19805 - 19655
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||| |||||| | |||        ||||||||||||||    
T  19805 taaggtaagggtgagactgactttctctaattctaagttgtataattctcaaattgagtttagcaagttgtaggctgt--------gaatttgggaatta 19714  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19713 ggtttttaagttgtaattggttgttaatagagtagaaaatccattgaatttgtgtagaa 19655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 19312 - 19207
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  19312 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatgatctaatctaacgtaagggtgggactaactttctctaattctaagttgtataatt 19213  T
Q  113 ctgaaa 118  Q
    ||||||    
T  19212 ctgaaa 19207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 5738 - 5633
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||    
T  5738 gagaagaatcttgtgagaagaagagcaatcttgtagagtccgatcatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataatt 5639  T
Q  113 ctgaaa 118  Q
    ||||||    
T  5638 ctgaaa 5633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 112966 - 113125
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa--ttgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    |||| |||||||| ||||||||||||||||||||||||  ||||| |||||||  |||| |||| || |||||| |||||| || |||||||||||||||    
T  112966 taagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttgggaatttgggaat 113065  T
Q  164 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    ||||||| ||||||||||||||||||| | | ||||||||||  |||||||| ||||||||    
T  113066 taggtttagaagttgtaattggttgttta-acagtagaaaatttgttgaattggtgtagaa 113125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 81620 - 81501
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattct-gaaattgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    |||||||||||||| ||||||| ||| ||||||||||  || || |||||  ||||||| |||| || |||||| ||||||||| |||||||||||||||    
T  81620 ttaaggtaagggtgggactaaccttcactaattctaa-atggatgattctaaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaat 81522  T
Q  164 taggttttgaagttgtaattg 184  Q
    ||||||| |||||||||||||    
T  81521 taggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 117807 - 117958
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg--aaattgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||| ||||  ||||||| |||| || |||| |  |||||        | |||||||||    
T  117807 taaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgaagattgta--------attttgggaat 117898  T
Q  164 taggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    ||||||| ||||||||||||||||||| | | |||||||||||  ||||||| | ||||||    
T  117899 taggtttagaagttgtaattggttgttta-acagtagaaaatctattgaattggcgtagaa 117958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 23839 - 23922
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  23839 gagaagaatcttgtgagaagaggagcaatcttgtagagtccgatcatctaattcaaggtaagggtgagactagctttctctaat 23922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 61821 - 61900
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  61821 aatcttgtagaatccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 61900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 221
Target Start/End: Complemental strand, 2941 - 2793
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| || ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||       || ||||||| ||||||    
T  2941 taaggtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgt-tgtt-------tgtgaatttgtgaatta 2850  T
Q  166 ggttttgaagttgt-aattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||| | || ||||||||||||||||| |||||||||| |||||||||||||    
T  2849 ggttttgaattagtaaattggttgttaatagaatagaaaatcctttgaatttgtgta 2793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 6688 - 6809
Alignment:
Q  69 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggt 168  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| ||  |||| || || ||| ||||||||| ||| ||||| ||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagttgtatgattctgaaactggatttaacaggtggtaggttgtagttttggaaatttaggaattaggt 6787  T
Q  169 tttgaagttgtaattggttgtt 190  Q
    || |||||||||||||||||||    
T  6788 ttagaagttgtaattggttgtt 6809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 51 - 234
Target Start/End: Original strand, 1043 - 1226
Alignment:
Q  51 tccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttat 149  Q
    |||||||||||||| ||||||||||||| |||||||||||||| |||||||||  |||||||||| ||||||| |||| || |||||| |||| |||| |    
T  1043 tccgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggttggagtttt 1142  T
Q  150 gggaatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaagtgatgtcca 234  Q
    | |||||||||| ||||| || |||||||||||| |||| |   ||||||| ||||| ||||||||  ||||||| | |||||||    
T  1143 gagaatttgggatttagggttagaagttgtaattagttgatttaagagtag-aaatctgttgaattgatgtagaaataatgtcca 1226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 118
Target Start/End: Original strand, 17913 - 17992
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17913 aatcttgtagaatccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 67; Significance: 7e-30; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 10755 - 10911
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||  |||| || |||||| ||| ||||| |||||||||||||||||    
T  10755 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaactggatttaacaggttgtaggtt-tagtt-tgggaatttgggaatta 10852  T
Q  166 ggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgtagaa 224  Q
    || || |||||||||||||||||||   | |||||| ||||  ||||||| ||||||||    
T  10853 gggttagaagttgtaattggttgttgtaatagtagagaatctattgaattggtgtagaa 10911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 5045 - 5097
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  5045 taaggtaagggtgggactaactttctctaattctaagttgtatgattgtgaaa 5097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 1989 - 1937
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||| ||||||| |||||||||| |||||||||||||  | |||||||||||    
T  1989 taaggaaagggtgggactaactttatctaattctaagtattttaattctgaaa 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 66; Significance: 3e-29; HSPs: 6)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 5310 - 5167
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| || ||||||||||||||  || ||||||||||||||||||||| ||| ||||||||| ||||       || |||||||||||||| |||    
T  5310 gtaagggtgggattaactttctctaatcttaggttgtataattctgaaattgagttttgcatgttgt-tgtt-------tgtgaatttgggaattacgtt 5219  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  5218 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 5167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 70 - 221
Target Start/End: Complemental strand, 11430 - 11287
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    ||||||||| || ||||||||||||||  || ||||||| ||||||||||||| ||| ||||||||| ||||       || ||||||||||||||||||    
T  11430 gtaagggtgggattaactttctctaatcttaggttgtatcattctgaaattgagttttgcatgttgt-tgtt-------tgtgaatttgggaattaggtt 11339  T
Q  170 ttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||| ||||    
T  11338 ttgaagttgtaattggttgttaatagaatagaaaatccattgactttttgta 11287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 220
Target Start/End: Complemental strand, 19759 - 19605
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| ||||| ||| || ||| ||||||||||  || ||| ||||||||||||||||| |||||||||||||   ||||   | || ||||||| |||||    
T  19759 ttaacgtaagtgtgggattaaatttctctaatcttaggttatataattctgaaattgagtttagcatgttgttgtttgtgaatttgtgaatttgagaatt 19660  T
Q  165 aggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtgt 220  Q
    ||||| |||||||||||||| ||||||||| | |||||||||| ||||||||||||    
T  19659 aggttatgaagttgtaattgattgttaata-aatagaaaatccattgaatttgtgt 19605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 5545 - 5454
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| ||||||||| |||||| || |||||||||| ||||||||||||| ||||| |||||||||||  | ||||||||||||||||||    
T  5545 gagaagaggagcaatctcgtagagaccaatcatctaatctaaggtaagggtgggactacctttctctaataatgagttgtataattctgaaa 5454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 11707 - 11616
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| ||||||||| | |||| ||||||||||||| |||| |||||||| |||||| |||||||||   |  |||||||||||||||||    
T  11707 gagaagaggagcaatctcgcagagaccgatcatctaatgtaagataagggtgggactaaatttctctaaaaatgggttgtataattctgaaa 11616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 96
Target Start/End: Complemental strand, 19947 - 19878
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| ||||||||| |||||  ||||||||||||| ||||||||||||  |||||  ||||||||||    
T  19947 gagaagaggagcaatctcgtagaaaccgatcatctaatctaaggtaagggtaggactagatttctctaat 19878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 190
Target Start/End: Complemental strand, 16650 - 16532
Alignment:
Q  72 aagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtttt 171  Q
    ||||||| |||||| ||| |||||||||||||||||| ||||||||| ||  |||| ||||| ||| ||||||||| ||| ||||||| ||||||||||     
T  16650 aagggtgggactaaatttatctaattctaagttgtatgattctgaaactggatttaacatgtggtaggttgtagttttggaaatttggcaattaggttta 16551  T
Q  172 gaagttgtaattggttgtt 190  Q
    |||||||||||||||||||    
T  16550 gaagttgtaattggttgtt 16532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 2402 - 2506
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataatt 112  Q
    |||| |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||  |  |||||||||||    
T  2402 gagaggaatcttgtgagaaga-gagcaatcttgtaaagtccgaacatctaatttaaggtaagggtgggactagctttctctaataatgggttgtataatt 2500  T
Q  113 ctgaaa 118  Q
    ||||||    
T  2501 ctgaaa 2506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 66 - 186
Target Start/End: Original strand, 4709 - 4830
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||| ||||||| |||| || |||||| |||| ||||   ||||||||| ||||    
T  4709 taaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggttgaagtttgtggaatttggaaatt 4808  T
Q  165 aggttttgaagttgtaattggt 186  Q
    |||||| |||||||| ||||||    
T  4809 aggtttagaagttgtcattggt 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 66 - 190
Target Start/End: Original strand, 106051 - 106175
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||| |||| ||  |||| || || |||   ||||||| ||| |||||||||||||    
T  106051 taaggtaagggtgtgactaactttctctaattctaagttgtatgattcggaaactggatttaacaggtggtagactgtagttttggaaatttgggaatta 106150  T
Q  166 ggttttgaagttgtaattggttgtt 190  Q
    ||||| || ||||||||||||||||    
T  106151 ggtttagacgttgtaattggttgtt 106175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 217
Target Start/End: Original strand, 26638 - 26779
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaattaggt 168  Q
    ||||||||| || ||||||||| ||||| || ||||||||||||||||| |||| ||||||||||||| ||||       || |||||||||||||||||    
T  26638 gtaagggtgggattaactttctttaattttaggttgtataattctgaaaattgagtttagcatgttgt-tgtt-------tgtgaatttgggaattaggt 26729  T
Q  169 tttgaagttgtaatt-ggttgttaatagagtagaaaatccgttgaatttg 217  Q
    |||||| | |||||| |||||||||||||||||||||||| |||||||||    
T  26730 tttgaattagtaatttggttgttaatagagtagaaaatccattgaatttg 26779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 66 - 187
Target Start/End: Original strand, 135504 - 135625
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||||||||||||| |||| |||| || |||||| ||||||||| ||||||||||||||||    
T  135504 taaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaatt 135602  T
Q  165 aggttttgaagttgtaattggtt 187  Q
    ||  || ||||||| ||||||||    
T  135603 agagttagaagttgaaattggtt 135625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 13499 - 13572
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaac 86  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||| |||||||    
T  13499 gagaagaatcttgtgagaagaggattaatcttgtagagtccgatcatctaatttaaggtaagggtgggactaac 13572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 65 - 183
Target Start/End: Complemental strand, 10851 - 10741
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| ||||||||| || ||||||||||||||| || ||||||||||||||||||||| ||||||||||||| ||||       || |||||||||||||    
T  10851 ttaatgtaagggtgggattaactttctctaattttaggttgtataattctgaaattgagtttagcatgttgt-tgtt-------tgtgaatttgggaatt 10760  T
Q  165 aggttttgaagttgtaatt 183  Q
    |||||||||||||||||||    
T  10759 aggttttgaagttgtaatt 10741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 11052 - 10969
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||||||||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||  |||| |||||||||||    
T  11052 gagaagaatcttgtgagaagaggagcaatcttgtagaatctgatcatctaatataaggtaagggtggaactagctttctctaat 10969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 8694 - 8571
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttggg-aat 163  Q
    ||||||||||||| ||||||| ||| |||||||||||| |||| ||||||||| |||| |||| || |||||| ||||||||| |||||||||||| |||    
T  8694 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttgggaatttgggaaat 8596  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  8595 tagggttagaagttgtaattggttg 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 18810 - 18744
Alignment:
Q  156 ttgggaattaggttttga-agttgtaattggttgttaatagagtagaaaatccgttgaatttgtgta 221  Q
    |||||||||||||||||| | ||| |||| ||||||||| || |||||||||| | |||||||||||    
T  18810 ttgggaattaggttttgagaattgcaattagttgttaattgaatagaaaatccatagaatttgtgta 18744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 60947 - 60843
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||| || | ||||| |||||    
T  60947 taaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaatt 60848  T
Q  165 aggtt 169  Q
    |||||    
T  60847 aggtt 60843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 188
Target Start/End: Original strand, 3053 - 3174
Alignment:
Q  67 aaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||| ||||||| |||  ||||||||||| |||| ||||||||| |||| |||| || |||||| ||||||||| ||||||||| |||||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttgggaatttaggaatta 3151  T
Q  166 ggttttgaagttgtaattggttg 188  Q
    || || |||||||||||||||||    
T  3152 gggttagaagttgtaattggttg 3174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 188
Target Start/End: Original strand, 2020 - 2143
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaat 163  Q
    ||||| |||||||| || |||| ||| |||||||||||| |||| ||| ||||| |||| |||| ||||||||| ||||||||| ||| |||||||||||    
T  2020 ttaagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttggaaatttgggaat 2118  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||||||  ||||||||||||||||    
T  2119 taggtttataagttgtaattggttg 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 66 - 188
Target Start/End: Complemental strand, 7329 - 7205
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgg-gaat 163  Q
    |||||| |||||| ||||||| |||| ||||||||||||||||||||||| ||||||  |||  ||||||||| ||| ||||| |||||||||||  |||    
T  7329 taaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggttatagttttgggaatttggaaaat 7230  T
Q  164 taggttttgaagttgtaattggttg 188  Q
    |||| || |||||||||||||||||    
T  7229 tagggttagaagttgtaattggttg 7205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 183
Target Start/End: Original strand, 20086 - 20202
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||| | ||||||| ||| |||||||||||| |||||||||||||| |||| |||| || |||||| ||| ||||| ||||||||||||||||    
T  20086 taaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttatagtt-tgggaatttgggaatt 20183  T
Q  165 aggttttgaagttgtaatt 183  Q
    | |||| ||||||||||||    
T  20184 atgtttagaagttgtaatt 20202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1256 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 2187 - 2252
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  2187 cgatcatctaacctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 2252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 67173 - 67060
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||| |||| ||||||||||||||||||| |||| ||||||||||| ||||||  |||| ||  ||||| ||||||||| | |||||||||||||     
T  67173 taaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaacaaattgtaggttgtagttttaggaatttgggaata 67074  T
Q  165 aggttttgaagttg 178  Q
    |||||| |||||||    
T  67073 aggtttagaagttg 67060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 18340 - 18275
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||  ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  18340 cgatcatctaacctaaggtaagggtgtgactagctttctctaataatgggttgtataattctgaaa 18275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 11107 - 11190
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||| ||||||||  ||||||||| ||| ||||||||| |||||||||||||||| || ||||| |||||||||||    
T  11107 gagaagaatcttctgagaagagaagcaatcttttagtgtccgatcacctaatttaaggtaaggatgggactagctttctctaat 11190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 86
Target Start/End: Complemental strand, 28650 - 28583
Alignment:
Q  19 aatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaac 86  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||| |||||||    
T  28650 aatcttgtgagaagaggagcaatcttgtagagtcctatcatctaatctaaggtaagagtgggactaac 28583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 126305 - 126407
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||| || ||||||||||||||||||||||||||||| ||||||||||||  |||| || ||||||  |||||||| || | ||||| ||||||    
T  126305 taaggtaagg-tgggactaactttctctaattctaagttgtatgattctgaaattggatttaacaagttgtagattgtagttttgaggatttgagaatta 126403  T
Q  166 ggtt 169  Q
    ||||    
T  126404 ggtt 126407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 6620 - 6686
Alignment:
Q  153 aatttgggaattaggttttgaagttgtaattggttgttaatagagtagaaaatccgttgaatttgtg 219  Q
    ||||||||||||||||||||| || ||||||||||||||||||||||||| ||||  ||||||||||    
T  6620 aatttgggaattaggttttgatgtcgtaattggttgttaatagagtagaagatccaatgaatttgtg 6686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 74 - 136
Target Start/End: Original strand, 1855 - 1917
Alignment:
Q  74 gggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgt 136  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  1855 gggtgggactaactttctctaattctaagtggtataattctgaaattgaatttaacatgttgt 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 20006 - 19905
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||  |||| || |||||| ||||||||| |||| ||||| |||||    
T  20006 taaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggttgtagtt-tggggatttgagaatt 19908  T
Q  165 agg 167  Q
    |||    
T  19907 agg 19905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 13911 - 13878
Alignment:
Q  155 tttgggaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||| |||||||||||||||||    
T  13911 tttgggaattaggtttagaagttgtaattggttg 13878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 5292 - 5353
Alignment:
Q  53 cgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattct 114  Q
    |||||||||||  ||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  5292 cgatcatctaacctaaggtaagggtgggactaactttctctaattttaagttgtataattct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 18613 - 18670
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  18613 aatcttgtagagtccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 188
Target Start/End: Original strand, 18731 - 18764
Alignment:
Q  155 tttgggaattaggttttgaagttgtaattggttg 188  Q
    |||||||||||||||| |||||||||||||||||    
T  18731 tttgggaattaggtttagaagttgtaattggttg 18764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 5712 - 5761
Alignment:
Q  71 taagggtgagactaactttctctaattctaagttgtataattctgaaatt 120  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaatt 5761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 15324 - 15272
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  15324 taaggtaagggtgggactaactttctctaattctaagttgtattattctgaaa 15272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 118
Target Start/End: Complemental strand, 2960 - 2881
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||| |||||| |||| ||||||||||||| ||||| |||||||||||  |  |||||||||||||||||    
T  2960 aatcttgtagagtctgatcatttaatctaaggtaagggtgggactagctttctctaataatgggttgtataattctgaaa 2881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 14546 - 14638
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| |||||| ||| |||||||||  |||||||||| ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  14546 gagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 14638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 23604 - 23696
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||| |||||| ||| |||||||||  |||||||||| ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  23604 gagaagaagagcaagctt-tagagtccggaatcatctaatctaaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 23696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 86
Target Start/End: Complemental strand, 11994 - 11921
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaac 86  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||   |||  |||| ||||||||||||||||    
T  11994 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaagataagggtgagactaac 11921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 4992 - 4888
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||| | |||  |||| ||||||||| | ||||||| || | ||||  |||||    
T  4992 taaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgaggatttaagaatt 4893  T
Q  165 aggtt 169  Q
    |||||    
T  4892 aggtt 4888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 4437 - 4333
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||||||| | || ||||||| |||| |||||||||||||||||||||||| || ||  |||| ||||||||| ||||||||| || | ||||| |||||    
T  4437 taaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaatt 4338  T
Q  165 aggtt 169  Q
    |||||    
T  4337 aggtt 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 12403 - 12323
Alignment:
Q  110 attctgaaattgattttagcatg-ttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 189  Q
    ||||||||||||| |||| |||| ||||| ||||||||| ||| |||||| ||||||||||| ||||||||||| ||||||    
T  12403 attctgaaattgaatttaacatggttgtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 398614 - 398510
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| |||| |||||||| ||||||||||||||| |||||  |||| ||||||||| | ||||||| || | ||||  |||||    
T  398614 taaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatttaagaatt 398515  T
Q  165 aggtt 169  Q
    |||||    
T  398514 aggtt 398510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 4718 - 4612
Alignment:
Q  81 actaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgta 180  Q
    |||||| ||| ||||| |||||| |||| ||||| ||||||| |||| || ||| || ||||| ||| |||||||||| ||||||||||| |||||||||    
T  4718 actaaccttcactaatcctaagt-gtatgattctaaaattgaatttaacaggttttaggttgtggttttgggaatttgagaattaggtttagaagttgta 4620  T
Q  181 attggttg 188  Q
    ||| ||||    
T  4619 attagttg 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 10393 - 10476
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||   |||  ||||||||||||| ||||||| |||| ||||    
T  10393 gagaataatcttgtgagaagaggagcaatcttgtagagttcgatcgattaacctaaggtaagggtgggactaaccttctttaat 10476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 91
Target Start/End: Complemental strand, 3979 - 3901
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttct 91  Q
    |||||||||||||||||||||||||||||||| |||||| |||||   |||  ||||||||||||| ||| ||| ||||    
T  3979 gagaagaatcttgtgagaagatgagcaatcttatagagttcgatcgattaacctaaggtaagggtgtgaccaaccttct 3901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 70 - 169
Target Start/End: Complemental strand, 96446 - 96347
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggtt 169  Q
    |||| |||| |||||||||||||||||||| |||||||| ||||||||| ||  |||| || |||||| ||||||||| || | ||| | ||||||||||    
T  96446 gtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaatggatttaacaagttgtaggttgtagttttgaggattggagaattaggtt 96347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 99
Target Start/End: Complemental strand, 2043 - 1957
Alignment:
Q  13 gagaagaatcttgtgagaagatgagcaatcttgtagagtccgatcatctaatttaaggtaagggtgagactaactttctctaattct 99  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||   ||   ||||||||||||| ||||||| |||  |||||||    
T  2043 gagaagaatcttgtgagaagaggagcaatcttgtagagttcgatcgattatgctaaggtaagggtgggactaaccttcaataattct 1957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 5418 - 5311
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| ||| ||||||||||| ||||| |||||| ||||||| |||| |||| ||||  |||||||| || ||||| |||||||    
T  5418 taaggtaagggtgggactaaccttcactaattctaag-tgtatgattctgaaaattgaatttaacatg-tgtagattgtagttttgtgaattcgggaatt 5321  T
Q  165 aggttttgaa 174  Q
    ||| ||||||    
T  5320 agggtttgaa 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 5861 - 5913
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||| ||||| |||||||||||||||||||||||  |||||||||||||    
T  5861 taaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaa 5913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0577 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 9111 - 9004
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    ||||||||||||| ||||||| |||  ||||||| |||  | ||||||||||| ||  |||| || |||||| ||||||||| | |||||||||||||||    
T  9111 taaggtaagggtgggactaaccttcagtaattctgagta-tgtaattctgaaactggatttaacaggttgtaggttgtagtttttggaatttgggaatta 9013  T
Q  166 ggttttgaa 174  Q
    || ||||||    
T  9012 gggtttgaa 9004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 5081 - 5029
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 9012 - 8960
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  9012 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 8960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 5081 - 5029
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  5081 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 21149 - 21097
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  21149 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 21097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 34164 - 34112
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  34164 taaggtaagggtgggactaactttctctaattctaagtattttaattctgaaa 34112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 169
Target Start/End: Original strand, 52544 - 52648
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctga-aattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    |||| |||||||| ||||||| |||  |||||||||||||| ||||||||| |||||  |||| ||||||||| | ||||||| || | ||||| |||||    
T  52544 taagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaatt 52643  T
Q  165 aggtt 169  Q
    |||||    
T  52644 aggtt 52648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 69853 - 69905
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  69853 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 69905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 165
Target Start/End: Complemental strand, 29440 - 29340
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||  |||| |||||||||||||||| |||||| ||| ||  |||| || |||||| ||||||||| |||| ||||| |||||    
T  29440 taaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttggggatttgagaatt 29341  T
Q  165 a 165  Q
    |    
T  29340 a 29340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 127302 - 127373
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccg--atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    ||||||| |||||| ||||||||||| |  |||||||||| ||||||||||||| ||||| |||||||||||    
T  127302 gagaagaggagcaagcttgtagagtctgtaatcatctaatctaaggtaagggtgggactagctttctctaat 127373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 193
Target Start/End: Original strand, 158822 - 158949
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| |||  ||||||| |||  ||| ||||| ||| |||  |||| || |||||| ||||||||| ||||||||||||||||    
T  158822 taaggtaagggtgggactaaccttcaataattctgagta-tatgattctaaaaattggatttaacaagttgtaggttgtagttttgggaatttgggaatt 158920  T
Q  165 aggttttgaagttgtaattggttgttaat 193  Q
    ||| || ||||||| || |||||| ||||    
T  158921 agggttagaagttgcaaatggttgataat 158949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 16419 - 16471
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||||||| ||||||| ||||||  |  |||||||||||||||||    
T  16419 taaggtaagggtgagattaactttatctaataatgggttgtataattctgaaa 16471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 11232 - 11193
Alignment:
Q  39 aatcttgtagagtccgatcatctaatttaaggtaagggtg 78  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  11232 aatcttgtagagtccgatcatctaatctaaggtaagggtg 11193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 195 - 233
Alignment:
Q  65 ttaaggtaagggtgagactaactttctctaattctaagt 103  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  195 ttaaggtaagggtgggactaactttctctaattctaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0878 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 3383 - 3474
Alignment:
Q  28 agaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||| |||||| ||| ||||||||||  ||||||||| ||||||||||||| ||||| |||||||||||  |  ||||||| |||||||||    
T  3383 agaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactagctttctctaataatgcgttgtatgattctgaaa 3474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 8731 - 8776
Alignment:
Q  51 tccgatcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||||    
T  8731 tccgatcatctaatctaaggtaagggtgagactagcttactctaat 8776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 28319 - 28451
Alignment:
Q  56 tcatctaatttaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaa 154  Q
    |||| ||| |||||||||||||| ||||| | |||  ||||||| |||  ||| ||||||||| |||  |||| || |||||| ||||||||| ||||||    
T  28319 tcatttaaattaaggtaagggtgggactacccttcaataattctgagta-tatgattctgaaaattggatttaacaagttgtaggttgtagttttgggaa 28417  T
Q  155 tttgggaattaggttttgaagttgtaattggttg 188  Q
    ||||| ||||||| || ||||||| || ||||||    
T  28418 tttggaaattagggttagaagttgcaaatggttg 28451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 118
Target Start/End: Complemental strand, 26776 - 26727
Alignment:
Q  69 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||| || ||||||||||||||| || |||||||||||||||||    
T  26776 ggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 26727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 2072 - 2020
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  2072 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 2020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 11275 - 11223
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||| ||||||||||||||||| ||||  | |||||||||||    
T  11275 taaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaa 11223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 31160 - 31046
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa-ttgattttagcatgttgtatgttgtagttatgggaatttgggaatt 164  Q
    ||||||||||||| ||||||| |||  ||||||| |||  | ||||||||||| |||  |||| || |||||| ||||||||| ||||||||||||||||    
T  31160 taaggtaagggtgggactaaccttcaataattctgagta-tgtaattctgaaaattggatttaacaagttgtaggttgtagtt-tgggaatttgggaatt 31063  T
Q  165 aggttttgaagttgtaa 181  Q
    ||| ||  |||||||||    
T  31062 agggttaaaagttgtaa 31046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 29216 - 29268
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||| ||| ||||||||||||||||||||||||  | |||||||||||    
T  29216 taaggtaagagtgggactaactttctctaattctaagtattttaattctgaaa 29268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 118
Target Start/End: Original strand, 186196 - 186248
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  |  |||||||||||||||||    
T  186196 taaggtaagggtgagactagctttctctaataatgggttgtataattctgaaa 186248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 30705 - 30607
Alignment:
Q  67 aaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgattttagcatgttgtatgttgtagttatgggaatttgggaatta 165  Q
    |||||||||||||||||||| |||  |||||||||||  | |||||||| ||||||  |||| ||||||||| ||| ||||| || |||||||| |||||    
T  30705 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggtt-tagttttgagaatttggaaatta 30607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 96
Target Start/End: Complemental strand, 4999 - 4958
Alignment:
Q  55 atcatctaatttaaggtaagggtgagactaactttctctaat 96  Q
    |||||||||| ||||||||||||| ||||| |||||||||||    
T  4999 atcatctaatataaggtaagggtgggactagctttctctaat 4958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 6416 - 6383
Alignment:
Q  70 gtaagggtgagactaactttctctaattctaagt 103  Q
    ||||||||| ||||||||||||||||||||||||    
T  6416 gtaagggtgggactaactttctctaattctaagt 6383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 103
Target Start/End: Original strand, 21777 - 21814
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagt 103  Q
    |||||||||| || ||||||||||||||||||||||||    
T  21777 taaggtaaggatgggactaactttctctaattctaagt 21814  T

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Target: scaffold0369 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 15576 - 15638
Alignment:
Q  27 gagaagatgagcaatcttgtagagtccga--tcatctaatttaaggtaagggtgagactaactt 88  Q
    ||||||| |||||| ||| ||||||||||  ||||||||| ||||||||||||| |||||||||    
T  15576 gagaagaggagcaagctt-tagagtccgaaatcatctaatctaaggtaagggtgggactaactt 15638  T

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Target: scaffold0308 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 13442 - 13370
Alignment:
Q  116 aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 188  Q
    ||||||| |||| || |||||| |||| |||| ||||||||||||||||||| ||  |||||| || ||||||    
T  13442 aaattgaatttaacaagttgtaggttgaagttttgggaatttgggaattagggttaaaagttgcaaatggttg 13370  T

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Target: scaffold0247 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 1128 - 1076
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    ||||||||||||||||||| |||||||||||  |   ||||||||||||||||    
T  1128 taaggtaagggtgagactagctttctctaataatggattgtataattctgaaa 1076  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 188
Target Start/End: Original strand, 35514 - 35586
Alignment:
Q  116 aaattgattttagcatgttgtatgttgtagttatgggaatttgggaattaggttttgaagttgtaattggttg 188  Q
    ||||||| |||| ||  ||||| ||||||||| ||||||||||||||||| | || ||||||| || ||||||    
T  35514 aaattgaatttaacaacttgtaggttgtagttttgggaatttgggaattaaggttagaagttgcaaatggttg 35586  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 6470 - 6418
Alignment:
Q  66 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 118  Q
    |||||||||||| |||||| |||||||||||  | |||||| |||||||||||    
T  6470 taaggtaagggtaagactagctttctctaataatgagttgtgtaattctgaaa 6418  T

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