View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8091_low_58 (Length: 236)
Name: NF8091_low_58
Description: NF8091
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8091_low_58 |
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Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 31835827 - 31836046
Alignment:
| Q |
1 |
aaacaaaaaacaaaattagggacaacgtaataatcctaaaggattaacaaaccatacaaatacaaacaagagtcttttgatacatgctccaaaagctttc |
100 |
Q |
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|
||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
31835827 |
aaacaaaaaacaaaattagggacaaagtaacaatcctaaaggattaacaaaccattcaaatacaaacgagagtcttttgatacatgctccaaaagctttc |
31835926 |
T |
|
| Q |
101 |
tccaagatgttaaccaacaaactcaagaatagaaaataccttatagagttcaatttttcaagcattttacaagagtcattttagaaatacaaaccaaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||||| |
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| T |
31835927 |
tccaagatgttaaccaacaaactcaagaatagaaaataccttatagagttcaatttttcaagcaatttacaagagtcattctagaaacacaaaccaaaaa |
31836026 |
T |
|
| Q |
201 |
ccaagaaagaaattgaaaac |
220 |
Q |
| |
|
|||||||||||||||||||| |
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| T |
31836027 |
ccaagaaagaaattgaaaac |
31836046 |
T |
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