View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8094_low_5 (Length: 261)
Name: NF8094_low_5
Description: NF8094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8094_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 53040734 - 53040982
Alignment:
| Q |
1 |
gaaaggccctttgccttgaagaagcttactctagataacaaaacctgcattaag---aaggattattaaaagctttgtaataaagtaagtagatgtaaca |
97 |
Q |
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| T |
53040734 |
gaaaggccctttgccttgaagaagcttactctagatagcaaaacctgcattaagaaaaaggatga-tgaaagctttgtaataaagtaagtagatgtaaca |
53040832 |
T |
|
| Q |
98 |
tctaggataagtagaagtatcccctagtatatacatgaaagcattgcaaagtttgtaaataaaataagtagaagtatcatttaggataagataatgccat |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
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| T |
53040833 |
tctaggataagtagaagtatcccctagtatatacatgaaagcattgcaaagtttgt-aacaaaataagtagaagtatcatttaggataagataatgccat |
53040931 |
T |
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| Q |
198 |
aaggcttgattgagtctattctatgtaatgtgtaggttgcaataaaatatt |
248 |
Q |
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|| ||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
53040932 |
aaagcttgattgagtctattctgtgtaatgtgtaggttgcaataaaatatt |
53040982 |
T |
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