View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8094_low_8 (Length: 360)
Name: NF8094_low_8
Description: NF8094
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8094_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 30 - 348
Target Start/End: Original strand, 41911211 - 41911531
Alignment:
| Q |
30 |
tgcatattattcgtttctaatataaacatcagacgtaaactcattcacttctttcactttaattatttgaccatcattaaattagaccaaaggtgacatg |
129 |
Q |
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| T |
41911211 |
tgcatattattcgtttctaataaaaacatcagacgtaaactcattcacttctttcactttaattatttgaccatgattaaattagaccaaaggtgacata |
41911310 |
T |
|
| Q |
130 |
cattataaaacaaatccatcatatcaatctaattaagtgcacattaattgatttaaagaaaaaaggtcatatatcttatcgaattcttttgaatattcaa |
229 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
41911311 |
cattataaaacaaatctatcatatcaatctaattaagtgcacatttattgatttaaagaaaaaaggtcatatatcttatcgaattcttttcaatattcaa |
41911410 |
T |
|
| Q |
230 |
aagataggttggagaaatatgatagtaaatccaaaagcgactgtttaatcttggcttaataatatagggatatacatatttgaacattacgtaggatatg |
329 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41911411 |
aagataggttggagaaatatgatagtaaatccaaaagcgactgtttaatcttggcttaataatatagggatatacatatttgaacattacgtaggatatg |
41911510 |
T |
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| Q |
330 |
--tttattcttctttgatttt |
348 |
Q |
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| T |
41911511 |
tatatattcttctttcatttt |
41911531 |
T |
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