View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8096_low_10 (Length: 314)
Name: NF8096_low_10
Description: NF8096
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8096_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 12 - 297
Target Start/End: Original strand, 38995062 - 38995347
Alignment:
| Q |
12 |
aacctgtgttatttgttgtatgaaacatgtacatattgtaaagaatctcacactaaaaggcatgagatctattataacaattgcagctttgttaaacttg |
111 |
Q |
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| T |
38995062 |
aacctgtgttatttgttgtatgaaacatgtacatattgtaaagaatctcacactaaaaggcatgagatctattataacaattgcagctttgttaaacttg |
38995161 |
T |
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| Q |
112 |
tttcatgccataagacatacctctgcatttgatttacacctctaattttcaatgaacatgagtctttcataattaatttcttttatctcttacgttttaa |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38995162 |
tttcatgccataagacatacctctgcatttgatttacacctctaattttcaatgaacatgagtctttcataattaatttcttttatctcttacgttttaa |
38995261 |
T |
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| Q |
212 |
ctttgacacataacaaatttgcttcctctaaacatataccttgcatactactatattatttaatacttaaatttgatgcacttgct |
297 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38995262 |
ctttgacacataacaaatttgcttcctctaaacatataccttgcatactactatattatttaatacttaaatttgatgcacttgct |
38995347 |
T |
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