View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8097_low_1 (Length: 469)

Name: NF8097_low_1
Description: NF8097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8097_low_1
NF8097_low_1
[»] chr6 (3 HSPs)
chr6 (20-298)||(3604900-3605193)
chr6 (119-258)||(30509286-30509424)
chr6 (33-115)||(3600746-3600830)
[»] chr4 (18 HSPs)
chr4 (119-263)||(38945016-38945161)
chr4 (119-258)||(47560596-47560733)
chr4 (113-232)||(50343828-50343946)
chr4 (160-233)||(41956468-41956541)
chr4 (160-260)||(54700882-54700980)
chr4 (174-234)||(53737846-53737906)
chr4 (160-258)||(41370206-41370304)
chr4 (170-258)||(42370362-42370449)
chr4 (113-216)||(50774973-50775075)
chr4 (170-232)||(50086456-50086518)
chr4 (164-257)||(48097923-48098016)
chr4 (119-233)||(37179686-37179799)
chr4 (174-207)||(9912994-9913027)
chr4 (119-216)||(10095638-10095734)
chr4 (119-238)||(39827146-39827265)
chr4 (144-216)||(16822286-16822358)
chr4 (222-258)||(27953140-27953176)
chr4 (119-234)||(32055338-32055453)
[»] chr1 (22 HSPs)
chr1 (119-258)||(40570659-40570800)
chr1 (119-234)||(26322613-26322728)
chr1 (160-258)||(34445639-34445737)
chr1 (170-258)||(9770184-9770272)
chr1 (160-236)||(33744173-33744249)
chr1 (174-233)||(8836543-8836602)
chr1 (112-258)||(17112673-17112821)
chr1 (170-252)||(26687514-26687597)
chr1 (119-237)||(17554849-17554966)
chr1 (160-258)||(25302042-25302140)
chr1 (160-217)||(36621944-36622001)
chr1 (174-258)||(7549813-7549897)
chr1 (170-258)||(37705847-37705935)
chr1 (195-258)||(31807853-31807916)
chr1 (119-234)||(36321623-36321737)
chr1 (164-207)||(44442271-44442314)
chr1 (144-258)||(4521030-4521142)
chr1 (180-258)||(43512747-43512825)
chr1 (170-255)||(4771995-4772080)
chr1 (144-193)||(48253328-48253377)
chr1 (170-234)||(6983038-6983102)
chr1 (160-216)||(28672326-28672382)
[»] chr2 (18 HSPs)
chr2 (119-233)||(10824632-10824746)
chr2 (160-258)||(3882586-3882684)
chr2 (119-258)||(42924415-42924552)
chr2 (119-233)||(16717604-16717717)
chr2 (160-258)||(18227092-18227190)
chr2 (119-175)||(38786260-38786316)
chr2 (113-234)||(10204151-10204274)
chr2 (161-215)||(35477727-35477782)
chr2 (170-258)||(11001492-11001579)
chr2 (160-255)||(18223087-18223182)
chr2 (149-216)||(27133088-27133155)
chr2 (160-258)||(2825994-2826092)
chr2 (180-234)||(13811034-13811087)
chr2 (160-257)||(2393078-2393174)
chr2 (160-253)||(8964368-8964460)
chr2 (165-233)||(33275936-33276004)
chr2 (180-216)||(45076186-45076222)
chr2 (119-187)||(45303559-45303626)
[»] chr8 (15 HSPs)
chr8 (119-232)||(36924031-36924144)
chr8 (133-235)||(39333511-39333612)
chr8 (164-258)||(20279597-20279691)
chr8 (164-258)||(21066224-21066318)
chr8 (113-261)||(7513287-7513434)
chr8 (170-258)||(41385235-41385323)
chr8 (125-258)||(22209376-22209508)
chr8 (160-216)||(7528265-7528321)
chr8 (160-258)||(36348527-36348625)
chr8 (174-258)||(12782747-12782831)
chr8 (162-216)||(7042946-7043001)
chr8 (164-218)||(9460468-9460522)
chr8 (169-257)||(2445171-2445258)
chr8 (160-258)||(39093054-39093153)
chr8 (170-255)||(39691162-39691247)
[»] chr7 (12 HSPs)
chr7 (162-263)||(31902789-31902889)
chr7 (119-260)||(37129809-37129952)
chr7 (160-258)||(44719434-44719532)
chr7 (160-233)||(33887890-33887963)
chr7 (170-234)||(40722353-40722417)
chr7 (168-230)||(39316073-39316135)
chr7 (114-185)||(28251965-28252035)
chr7 (170-216)||(42911072-42911118)
chr7 (160-233)||(1360531-1360604)
chr7 (174-230)||(3256679-3256736)
chr7 (160-260)||(10031959-10032059)
chr7 (143-214)||(15995902-15995974)
[»] chr5 (14 HSPs)
chr5 (160-258)||(17098224-17098322)
chr5 (112-258)||(2816148-2816294)
chr5 (174-258)||(34032142-34032226)
chr5 (170-216)||(3758212-3758258)
chr5 (174-251)||(27016648-27016725)
chr5 (119-208)||(27833288-27833376)
chr5 (170-233)||(36160314-36160377)
chr5 (160-217)||(32017456-32017513)
chr5 (222-258)||(112586-112622)
chr5 (174-258)||(25415916-25416000)
chr5 (170-257)||(8761898-8761985)
chr5 (174-216)||(26663647-26663689)
chr5 (174-216)||(26935242-26935284)
chr5 (181-217)||(25710852-25710888)
[»] chr3 (17 HSPs)
chr3 (183-255)||(31372311-31372382)
chr3 (119-233)||(24658434-24658547)
chr3 (119-228)||(46188578-46188685)
chr3 (119-232)||(48322204-48322316)
chr3 (170-257)||(24313522-24313609)
chr3 (160-258)||(25461441-25461539)
chr3 (160-258)||(30463995-30464091)
chr3 (119-214)||(38457215-38457308)
chr3 (113-216)||(46711906-46712008)
chr3 (174-216)||(50368458-50368500)
chr3 (185-258)||(45757899-45757972)
chr3 (170-255)||(48551013-48551098)
chr3 (170-255)||(50217019-50217104)
chr3 (197-258)||(52308986-52309047)
chr3 (189-261)||(3996025-3996097)
chr3 (144-216)||(37708449-37708521)
chr3 (124-207)||(40546348-40546431)
[»] scaffold0009 (1 HSPs)
scaffold0009 (174-238)||(189059-189123)
[»] scaffold0018 (1 HSPs)
scaffold0018 (170-257)||(138076-138163)
[»] scaffold0192 (1 HSPs)
scaffold0192 (159-207)||(15932-15980)
[»] scaffold0113 (1 HSPs)
scaffold0113 (160-259)||(13909-14005)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 2e-93; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 20 - 298
Target Start/End: Original strand, 3604900 - 3605193
Alignment:
Q  20 tttaataaatgttaaaaacgttttctttcaccaaataattgctttcaagttactgtgctttc--aagtgacttcatgcctgacatcacacacaagcactt 117  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||| |    
T  3604900 tttaataaatgtaaaaaacgttttctttcaccaaataattgctttcaagttactgtgcttccttaagtgacttcatgcctgacatcacacacaagcacgt 3604999  T
Q  118 ------------gttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataa 205  Q
                |||||||||||||||||||||||||||||||||||| ||| |||| ||||| ||| |||||||||||||||||||||||| |||||||    
T  3605000 acacaagcattcgttaaggaccataattagtaaatatattatgaaaatgcatgcaattaatgttttggaaatcgaaatatttgactttcttagagaataa 3605099  T
Q  206 ttgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagacacaaagt-taatagcaacaatgttcttttttaaaaatgaat 298  Q
    ||| |||||||| |||||||||||||||  ||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||    
T  3605100 ttgtttattttgaatagcttaaagagtgtcccgatgacactcgttaacaagacccaaagtataatagcaacgatgttcttttttaaaaatgaat 3605193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 30509424 - 30509286
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    |||||||| |||| ||| || ||| |||| |||||||||  ||||||||  |||||||||||||| ||||| ||| ||||||||||||||||||||||||    
T  30509424 ttaaggactataaatagcaagtat-ttataaaaatacatgtaatcaatgcattgaaaatcgaaatgtttgatttttttaaagaataattgcttattttgg 30509326  T
Q  219 atagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
       |||||||||||| ||||  ||||||||||||||||||    
T  30509325 tatgcttaaagagtgttccggagacactcgttaacaagac 30509286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 115
Target Start/End: Original strand, 3600746 - 3600830
Alignment:
Q  33 aaaaacgttttctttcaccaaataattgctttcaagttactgtgctt--tcaagtgacttcatgcctgacatcacacacaagcac 115  Q
    ||||| |||| ||||||| |||||||||||||| ||||||||| |||  |  |||||||||| ||||||||||| ||||||||||    
T  3600746 aaaaaagtttcctttcactaaataattgctttctagttactgttcttccttgagtgacttcacgcctgacatcagacacaagcac 3600830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 2e-31; HSPs: 18)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 38945016 - 38945161
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaata-tttgactttcttaaagaataattgcttattttg 217  Q
    ||||| ||||||||||||||||||||||||||||| ||   ||||||||||||| ||||||||| | ||||||||| | | |||||||||||||| ||||    
T  38945016 ttaagaaccataattagtaaatatattatgaaaatgcaagtaatcaatgtcttggaaatcgaaaaagtttgactttttaagagaataattgcttaatttg 38945115  T
Q  218 gatagcttaaagagtgctccgatgacactcgttaacaagacacaaa 263  Q
    |||||||||||||||||  ||  | |||||||||||||||| ||||    
T  38945116 gatagcttaaagagtgccgcgggggcactcgttaacaagacccaaa 38945161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 47560733 - 47560596
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||||||||||| |||||| ||| | |||||||| | |  ||||||||| || |||||| ||| |||||| ||| ||||| ||||||||||||||||||    
T  47560733 ttaaggaccataaatagtaagtat-taatgaaaatgcgtgtaatcaatgtattaaaaatcaaaacatttgatttttttaaa-aataattgcttattttgg 47560636  T
Q  219 atagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |  | ||||||||||   ||| ||||||||||||||||||    
T  47560635 aatgattaaagagtgtctcgaagacactcgttaacaagac 47560596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 113 - 232
Target Start/End: Original strand, 50343828 - 50343946
Alignment:
Q  113 cacttgttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgctta 212  Q
    ||||| ||||||||| ||| ||||||  || ||||||||||||||| |||||||   ||||||||  |||||||||||||| ||||||||||||| ||||    
T  50343828 cactttttaaggaccgtaagtagtaagaat-ttatgaaaatacatataatcaatacattgaaaattaaaatatttgacttttttaaagaataattactta 50343926  T
Q  213 ttttggatagcttaaagagt 232  Q
    ||||  |  |||||||||||    
T  50343927 ttttaaaatgcttaaagagt 50343946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 41956468 - 41956541
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtg 233  Q
    ||||||||  |||||||| ||||||||| | |||||||||||||| || |||||||||||| ||||||||||||    
T  41956468 aatcaatgcgttgaaaattgaaatatttaaatttcttaaagaatactttcttattttggattgcttaaagagtg 41956541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 54700882 - 54700980
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagaca 259  Q
    ||||| || |||| ||||| |||||||||||||| |  |||||||||| ||||||||  |  ||||||||||||  ||||||||||||||||||||||||    
T  54700882 aatcattgccttggaaatcaaaatatttgacttttt--aagaataattacttattttaaaatgcttaaagagtgtcccgatgacactcgttaacaagaca 54700979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 53737846 - 53737906
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgc 234  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||||  |||||||||||||    
T  53737846 aaatcgaaatatttgaattttttaaagaataatttcttattttggaacgcttaaagagtgc 53737906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 41370206 - 41370304
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  |||||||| ||||||||| ||||| || |  ||||||| |||| ||||||| |||||| ||||||||||   |||||||||||||||||    
T  41370206 aatcaatgcattgaaaattgaaatatttaacttttttgagaaataatttcttaatttggattgcttaatgagtgctccggaaacactcgttaacaagac 41370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 42370362 - 42370449
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  |||||||| ||||| ||||||||||||||||| ||||||   ||||||||||||| || |  |||||||||||||||||    
T  42370362 ttgaaaattaaaatattttacttt-ttaaagaataattgcttgttttggtatgcttaaagagtgccccaaaaacactcgttaacaagac 42370449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 216
Target Start/End: Complemental strand, 50775075 - 50774973
Alignment:
Q  113 cacttgttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgctta 212  Q
    ||||| ||||| | ||||| || ||||||| |||||||||||  |  ||||||| | ||||||||| |||||||| ||||| ||||||||||||| ||||    
T  50775075 cactttttaagaatcataagtaataaatat-ttatgaaaatatgtgtaatcaatatgttgaaaatcaaaatatttaacttttttaaagaataattactta 50774977  T
Q  213 tttt 216  Q
    ||||    
T  50774976 tttt 50774973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 50086456 - 50086518
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagt 232  Q
    ||||||||| |||||||||| ||| |||||||||||||| ||||||||||  | |||||||||    
T  50086456 ttgaaaatcaaaatatttgatttttttaaagaataattgtttattttggaatgtttaaagagt 50086518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 164 - 257
Target Start/End: Complemental strand, 48098016 - 48097923
Alignment:
Q  164 aatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaaga 257  Q
    ||||| ||| |||| ||| ||||| ||||| ||||||||||||| |||| ||| ||   |||||| |||||||||  |||||||||||||||||    
T  48098016 aatgtattggaaattgaactatttaacttttttaaagaataatttcttaatttagaatacttaaaaagtgctccggagacactcgttaacaaga 48097923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 37179799 - 37179686
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    |||||||| |||| ||| || ||| |||| |||||||||| |||||||   ||| |||||||||| |||||||||  |||| ||||||| ||| ||||||    
T  37179799 ttaaggactataaatagcaagtat-ttataaaaatacatataatcaatacattggaaatcgaaatgtttgacttttctaaaaaataattacttgttttgg 37179701  T
Q  219 atagcttaaagagtg 233  Q
       ||||||||||||    
T  37179700 tatgcttaaagagtg 37179686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 9913027 - 9912994
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataatt 207  Q
    |||| |||||||||||||||||||||||||||||    
T  9913027 aaattgaaatatttgactttcttaaagaataatt 9912994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 10095638 - 10095734
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    ||||||| ||||| ||| |||||| |||| ||||| |||  ||||| ||  |||||||||||||||||||| ||| |||||  ||||||| |||||||    
T  10095638 ttaaggatcataagtagaaaatat-ttataaaaatgcatgtaatcattgcattgaaaatcgaaatatttgatttttttaaaagataattgtttatttt 10095734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 39827146 - 39827265
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataa-ttgcttattttg 217  Q
    |||||||| |||| |||||| ||| |||| ||| ||||   ||||||||  |||||||| ||||| |||||| || ||||||||||| |||||| ||||     
T  39827146 ttaaggactataaatagtaagtat-ttataaaattacaagtaatcaatgaattgaaaattgaaatttttgacatttttaaagaataatttgcttgtttt- 39827243  T
Q  218 gata-gcttaaagagtgctccg 238  Q
    |||| |||||||||||||||||    
T  39827244 gatatgcttaaagagtgctccg 39827265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 216
Target Start/End: Original strand, 16822286 - 16822358
Alignment:
Q  144 ttatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    |||||||||| |||  || |||| ||||| |||| ||||||||||| ||| | ||| ||||||||||||||||    
T  16822286 ttatgaaaatgcatgtaaacaatatcttggaaattgaaatatttgattttttaaaaaaataattgcttatttt 16822358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 27953140 - 27953176
Alignment:
Q  222 gcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||||||||||  ||||||||||||||||||    
T  27953140 gcttaaagagtgctccggagacactcgttaacaagac 27953176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 32055338 - 32055453
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaa-tatttgactttcttaaagaataattgcttattttg 217  Q
    |||||||| |||| ||| || ||| |||| |||||||||  ||||||||  ||| ||||||||| | |||||||||  |||||||||||||||| ||||     
T  32055338 ttaaggactataaatagcaagtat-ttataaaaatacatgtaatcaatgcattggaaatcgaaaatgtttgacttttctaaagaataattgcttgttttt 32055436  T
Q  218 gatagcttaaagagtgc 234  Q
    |   |||||||||||||    
T  32055437 gtatgcttaaagagtgc 32055453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 2e-31; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 119 - 258
Target Start/End: Complemental strand, 40570800 - 40570659
Alignment:
Q  119 ttaaggaccataattagtaaa-tatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgctta-tttt 216  Q
    |||||||||||| |||||||  |||||||||||||| |||  ||||||||||| | |||||||||| ||||||||| |||||||||||||||| | ||||    
T  40570800 ttaaggaccatagttagtaaggtatattatgaaaatgcatgtaatcaatgtctaggaaatcgaaatgtttgacttttttaaagaataattgctaattttt 40570701  T
Q  217 ggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||||||||||| |||  | ||||||||||||||||    
T  40570700 ggatagcttaaagagtgccccgggggcactcgttaacaagac 40570659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 26322613 - 26322728
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||||| |||||||||||| |||||||||||||| |||  ||||||||||||| |||||||||| ||||| ||| || |||||||||||||||||||      
T  26322613 ttaaggatcataattagtaagtatattatgaaaatgcatgtaatcaatgtcttggaaatcgaaatgtttgattttttttaagaataattgcttattttaa 26322712  T
Q  219 atagcttaaagagtgc 234  Q
    ||||||||||||||||    
T  26322713 atagcttaaagagtgc 26322728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 34445737 - 34445639
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  ||| |||||||||||||||||||| ||| | | ||||| ||| |||||||   ||||||||||||||||  | ||||||||||||||||    
T  34445737 aatcaatgcattggaaatcgaaatatttgacttttttataaattaatttcttcttttggaatccttaaagagtgctccgggggcactcgttaacaagac 34445639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 9770272 - 9770184
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  |||||||||| ||| ||||| ||||||| || |||||||||||||||| ||||| || |  |||||| |||||||||||    
T  9770272 ttgaaaattaaaatatttgatttttttaaaaaataatttctaattttggatagcttaacgagtgttctggggacactagttaacaagac 9770184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 236
Target Start/End: Original strand, 33744173 - 33744249
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctc 236  Q
    ||||||||  |||||||||||||||||||||||| | ||| ||||||| ||||||||  |  |||||||||||||||    
T  33744173 aatcaatgcattgaaaatcgaaatatttgactttttaaaaaaataattacttattttaaaatgcttaaagagtgctc 33744249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 8836543 - 8836602
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtg 233  Q
    |||||||||||||||||||| |||||||||||||| |||||| | |  ||||||||||||    
T  8836543 aaatcgaaatatttgacttttttaaagaataattgtttatttcgaaatgcttaaagagtg 8836602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 258
Target Start/End: Complemental strand, 17112821 - 17112673
Alignment:
Q  112 gcacttgttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataat---tg 208  Q
    |||||||||||| || |||| || ||| ||| ||||||||||| ||  ||||||||  ||| ||||| |||||||||||||| || |||||||||   |     
T  17112821 gcacttgttaagaacaataagtactaactat-ttatgaaaatatatgtaatcaatgcattggaaatcaaaatatttgacttttttgaagaataataatta 17112723  T
Q  209 cttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||    |||||||||||||  ||| | ||||||||||||||||    
T  17112722 cttattttgccatgcttaaagagtgcctcgaaggcactcgttaacaagac 17112673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 252
Target Start/End: Complemental strand, 26687597 - 26687514
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaaga-ataattgcttattttggatagcttaaagagtgctccgatgacactcgttaa 252  Q
    |||||||||||||||||||||||| || || | || |||||||||||| ||  |||||||||||| ||||| | ||||||||||    
T  26687597 ttgaaaatcgaaatatttgactttttttaaaagattattgcttattttagaatgcttaaagagtgttccgagggcactcgttaa 26687514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 17554966 - 17554849
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||||||||||| || ||| ||| ||||||||| | ||| ||||||||  ||| |||| |||| |||| ||||| ||||| |||||||| ||||||||     
T  17554966 ttaaggaccataagtaataactat-ttatgaaaaaatatataatcaatgcattgtaaattgaaacatttaacttttttaaaaaataattgtttattttga 17554868  T
Q  219 atagcttaaagagtgctcc 237  Q
    |  | ||||||||||||||    
T  17554867 aatgtttaaagagtgctcc 17554849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 25302140 - 25302042
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||| |||||||||||||| ||||||||| ||| | ||| |||  || |||||||   ||||||||||| || |  ||||||||||||||||||    
T  25302140 aatcaatgtattgaaaatcgaaatctttgacttttttatacaattattttttgttttggaatccttaaagagtgttctggggacactcgttaacaagac 25302042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 36622001 - 36621944
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttg 217  Q
    ||||| ||| ||| ||||| |||||||| ||||| |||||||||||||||||||||||    
T  36622001 aatcattgttttggaaatcaaaatatttaacttttttaaagaataattgcttattttg 36621944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 7549897 - 7549813
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||||||||||||| ||| | ||| ||| ||| ||||| |   |||||||||||  |||| ||||||||||||||||||    
T  7549897 aaatcgaaatatttgacttttttataaaattatttcttcttttgaaattcttaaagagtgtcccgaggacactcgttaacaagac 7549813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 37705935 - 37705847
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||| ||| |||||| |||  |||| ||||||| || ||||| ||  |||||||||||||||||  | ||||||||||||||||    
T  37705935 ttgaaaatcaaaacatttgagttttctaaaaaataattactcattttcgaatgcttaaagagtgctccgggggcactcgttaacaagac 37705847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 31807853 - 31807916
Alignment:
Q  195 ttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||||||| |||||||| ||  ||||||| |||||||||  | ||||||||||||||||    
T  31807853 ttaaagaataattacttattttagaatgcttaaatagtgctccgggggcactcgttaacaagac 31807916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 36321623 - 36321737
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    |||||||| |||| ||| || ||| |||| |||||||||  ||||||||  ||| |||||||||| ||| |||||  |||||||||||| ||| ||||||    
T  36321623 ttaaggactataaatagcaagtat-ttataaaaatacatgtaatcaatgcattggaaatcgaaatgtttaacttttctaaagaataattacttgttttgg 36321721  T
Q  219 atagcttaaagagtgc 234  Q
       |||||||||||||    
T  36321722 tatgcttaaagagtgc 36321737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 44442314 - 44442271
Alignment:
Q  164 aatgtcttgaaaatcgaaatatttgactttcttaaagaataatt 207  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||    
T  44442314 aatgtattgaaaattgaaatatttgacttttttaaagaataatt 44442271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 258
Target Start/End: Original strand, 4521030 - 4521142
Alignment:
Q  144 ttatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgac 243  Q
    |||| |||||||||  ||||||||  ||| |||| ||||| ||| ||||| |||||||||||| |||| |||| |   ||||||||||||| |||| | |    
T  4521030 ttataaaaatacatgtaatcaatgcattggaaattgaaatgtttaacttttttaaagaataatcgcttgttttagtatgcttaaagagtgc-ccga-ggc 4521127  T
Q  244 actcgttaacaagac 258  Q
    |||||||||||||||    
T  4521128 actcgttaacaagac 4521142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 43512825 - 43512747
Alignment:
Q  180 aaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||||||| |||||||||||||  ||| | ||||   ||||||||||| ||  | ||||||||||||||||||    
T  43512825 aaatatttgacttttttaaagaataattaattaatatggaatccttaaagagtgttctcaagacactcgttaacaagac 43512747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 4772080 - 4771995
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaa 255  Q
    |||||||||||||||||  ||||| | ||| |||||||||||  |||||   ||||||||||||| |||  | |||||||||||||    
T  4772080 ttgaaaatcgaaatattctactttttaaaaaaataattgcttcatttggtatgcttaaagagtgccccggaggcactcgttaacaa 4771995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 48253377 - 48253328
Alignment:
Q  144 ttatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgacttt 193  Q
    |||||||||||  || ||||||||| ||||||||||||||| ||||||||    
T  48253377 ttatgaaaatatgtataatcaatgtattgaaaatcgaaatagttgacttt 48253328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 6983038 - 6983102
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgc 234  Q
    |||||||| ||||||||||||| | |||| |||||||| |||| ||||||   ||||||||||||    
T  6983038 ttgaaaattgaaatatttgactcttttaatgaataatttcttaatttggaatacttaaagagtgc 6983102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 28672326 - 28672382
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    ||||||||  || |||||| |||||||||||||| ||||| |||||||| |||||||    
T  28672326 aatcaatgcatttaaaatcaaaatatttgacttttttaaaaaataattgtttatttt 28672382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 8e-25; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 10824746 - 10824632
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    |||| ||||||||||||||| ||||||||||||||||||  ||||||| ||||| ||||  |||| ||||||||| | ||||||||| ||||||||||||    
T  10824746 ttaaagaccataattagtaagtatattatgaaaatacatgtaatcaatatcttggaaattaaaatgtttgactttttaaaagaataactgcttattttgg 10824647  T
Q  219 atagcttaaagagtg 233  Q
    ||| |||||| ||||    
T  10824646 ataacttaaaaagtg 10824632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 3882684 - 3882586
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  ||||||| ||||||||||||| || |||||||||||||||||||||| ||  ||||||||||||| |||| | ||||||||||||||||    
T  3882684 aatcaatgcattgaaaaccgaaatatttgacctttttaaagaataattgcttattttagaatgcttaaagagtgccccgagggcactcgttaacaagac 3882586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 119 - 258
Target Start/End: Original strand, 42924415 - 42924552
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    |||||| |||||| |||||||||| |||||||||| |||  |||||||   |||||||| ||||||||||| ||| || || ||||||| ||| |||| |    
T  42924415 ttaaggtccataaatagtaaatat-ttatgaaaatgcatgtaatcaatacgttgaaaattgaaatatttgattttttttaaaaataattacttcttttag 42924513  T
Q  219 atagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |  ||||||||||||| |||| |||||||||| |||||||    
T  42924514 aatgcttaaagagtgcaccga-gacactcgttgacaagac 42924552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 233
Target Start/End: Complemental strand, 16717717 - 16717604
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||||| ||||| |||||| ||| |||||||||| |||| ||||||||  ||| ||||| |||||||| | ||| ||||||||||||| |||||||| |    
T  16717717 ttaaggaacataagtagtaagtat-ttatgaaaatgcatataatcaatgctttggaaatcaaaatatttaatttttttaaagaataattacttattttag 16717619  T
Q  219 atagcttaaagagtg 233  Q
    |  ||||||||||||    
T  16717618 aatgcttaaagagtg 16717604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 18227190 - 18227092
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  ||||||||||||||||||||||||  | |||||||||| ||||||||  |  | |||||||||| ||||  ||||||||||||||||||    
T  18227190 aatcaatgcattgaaaatcgaaatatttgacttttatgaagaataattacttattttataatgtttaaagagtgttccggagacactcgttaacaagac 18227092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 38786316 - 38786260
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaa 175  Q
    |||||||| ||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  38786316 ttaaggactataattagtaagtatattatgaaaatgcatctaatcaatgtcttgaaa 38786260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 10204274 - 10204151
Alignment:
Q  113 cacttgttaaggaccataattagtaaatat-attatgaaaa-tacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgct 210  Q
    ||||| ||||||||||||| |||||||||| | |||||||| | |||  ||||||||  ||||||||||||| |||||| ||| || ||||||||||  |    
T  10204274 cactttttaaggaccataagtagtaaatattagtatgaaaaatgcatgtaatcaatgcattgaaaatcgaaacatttgaattttttgaagaataattatt 10204175  T
Q  211 tattttggatagcttaaagagtgc 234  Q
    ||||||| |  | |||||||||||    
T  10204174 tattttgtaatggttaaagagtgc 10204151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 35477727 - 35477782
Alignment:
Q  161 atcaatgtcttgaaaatcgaaatatttgac-tttcttaaagaataattgcttattt 215  Q
    |||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||    
T  35477727 atcattgtcttggaaatcgaaatatttgactttttttaaagaataattgcttattt 35477782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 11001492 - 11001579
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||||||  |  | || ||| ||| || || ||||||||||||||||||    
T  11001492 ttgaaaatcgaaacatttgacttt-ttaaaaaataattgcttattttaaaatgtttgaagtgtgttcggaagacactcgttaacaagac 11001579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 255
Target Start/End: Complemental strand, 18223182 - 18223087
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaa 255  Q
    ||||||||  ||| |||| ||||||||  | ||| ||||||||||||||||| ||||||   ||||||| ||||  |||| |||||||||||||||    
T  18223182 aatcaatgcattggaaattgaaatattctatttttttaaagaataattgcttgttttggtatgcttaaaaagtgtcccgaagacactcgttaacaa 18223087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 27133155 - 27133088
Alignment:
Q  149 aaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    ||||| |||| ||||||||  ||| |||||||| | | ||||||| ||||||||||||||||||||||    
T  27133155 aaaatgcatataatcaatgcattggaaatcgaattgtatgacttttttaaagaataattgcttatttt 27133088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 2825994 - 2826092
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  ||| |||||||||||||| ||||| ||||| ||||||| |||||||| |   ||||||||||| |  |   ||||||||||||||||||    
T  2825994 aatcaatgcattggaaatcgaaatattttacttttttaaaaaataatttcttattttagtatgcttaaagagtaccacagggacactcgttaacaagac 2826092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Complemental strand, 13811087 - 13811034
Alignment:
Q  180 aaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgc 234  Q
    |||||||| ||||| ||||||||||||||||| |||||| | |||||||||||||    
T  13811087 aaatattttacttttttaaagaataattgcttgttttgg-ttgcttaaagagtgc 13811034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 257
Target Start/End: Original strand, 2393078 - 2393174
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaaga 257  Q
    |||||||||||||| |||| |||||||||||||| ||| | | ||||| ||| |||| ||   |||||||| |||||||  | |||||||||||||||    
T  2393078 aatcaatgtcttgagaatcaaaatatttgacttttttataaattaatttcttcttttagaatccttaaagaatgctccggag-cactcgttaacaaga 2393174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 8964460 - 8964368
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaac 253  Q
    ||||||||  ||| |||| ||||||||| ||||| ||||||||||||| |||| ||| ||  ||||||| ||||||  || |||||||||||||    
T  8964460 aatcaatgcattggaaattgaaatattttacttttttaaagaataattacttaatttagaatgcttaaacagtgcttgga-gacactcgttaac 8964368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 233
Target Start/End: Original strand, 33275936 - 33276004
Alignment:
Q  165 atgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtg 233  Q
    |||| |||||||| ||||||||| ||||| ||||| ||||||| ||| |||| ||  ||||||||||||    
T  33275936 atgtattgaaaattgaaatatttaacttttttaaaaaataatttcttgttttagaatgcttaaagagtg 33276004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 45076186 - 45076222
Alignment:
Q  180 aaatatttgactttcttaaagaataattgcttatttt 216  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  45076186 aaatatttaacttttttaaagaataattgcttatttt 45076222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 119 - 187
Target Start/End: Complemental strand, 45303626 - 45303559
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatattt 187  Q
    ||||||||||||| |||||| ||| |||||||||| |||  |||||||||||| |||||  ||||||||    
T  45303626 ttaaggaccataaatagtaagtat-ttatgaaaatgcatgtaatcaatgtctttaaaataaaaatattt 45303559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 36924144 - 36924031
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||| ||||||| ||||||  ||||||||||||| |||  ||| ||||| ||| |||||||||||||||||||| ||||||||||||| ||| |||| |    
T  36924144 ttaagaaccataagtagtaagaatattatgaaaatgcatgtaattaatgttttggaaatcgaaatatttgacttttttaaagaataatttcttgtttttg 36924045  T
Q  219 atagcttaaagagt 232  Q
    ||||||||||||||    
T  36924044 atagcttaaagagt 36924031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 39333511 - 39333612
Alignment:
Q  133 tagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagt 232  Q
    |||||| |||||| ||||||| |||  |||||||||||||||| ||||||| ||||||||| || ||||||||||||||||||| |||||||||| ||||    
T  39333511 tagtaagtatattttgaaaatgcatgtaatcaatgtcttgaaa-tcgaaatgtttgacttttttgaagaataattgcttattttagatagcttaaggagt 39333609  T
Q  233 gct 235  Q
    |||    
T  39333610 gct 39333612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 20279597 - 20279691
Alignment:
Q  164 aatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||| |||||||| ||||||||||||||| | |||||||||||||||||||| ||  ||||||||||||| |||  | |||| |||||||||||    
T  20279597 aatgtattgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaagac 20279691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 164 - 258
Target Start/End: Original strand, 21066224 - 21066318
Alignment:
Q  164 aatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||| |||||||| ||||||||||||||| | |||||||||||||||||||| ||  ||||||||||||| |||  | |||| |||||||||||    
T  21066224 aatgtattgaaaattgaaatatttgactttttgaaagaataattgcttattttagaatgcttaaagagtgccccgggggcacttgttaacaagac 21066318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 113 - 261
Target Start/End: Original strand, 7513287 - 7513434
Alignment:
Q  113 cacttgttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgctta 212  Q
    ||||| |||||||| |||| ||| || ||| |||| |||||||||  ||||||||  |||||||||||||| ||| | |||  ||||||||||||||||     
T  7513287 cactttttaaggactataaatagcaagtat-ttataaaaatacatgtaatcaatgcattgaaaatcgaaatgtttaatttttctaaagaataattgcttg 7513385  T
Q  213 ttttggata-gcttaaagagtgctccgatgacactcgttaacaagacaca 261  Q
    |||| |||| ||||||||||||| |||   ||||||||||||||||||||    
T  7513386 tttt-gatatgcttaaagagtgccccgggaacactcgttaacaagacaca 7513434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 258
Target Start/End: Complemental strand, 41385323 - 41385235
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||| |||| || |||||||||||| |||||||| |||||||||||| ||||||||| |||  ||  ||||||||||||||||||    
T  41385323 ttgaaaattgaaacatctgactttcttaaggaataatttcttattttggattgcttaaagaatgcctcggggacactcgttaacaagac 41385235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 258
Target Start/End: Complemental strand, 22209508 - 22209376
Alignment:
Q  125 accataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagct 224  Q
    ||||||| |||||| ||| ||||||||||| ||  ||||||||||||| ||||| |||||||| ||||| |||| |||||||||||| ||||  |  |||    
T  22209508 accataaatagtaagtat-ttatgaaaatatatgtaatcaatgtcttggaaatcaaaatatttaacttttttaaggaataattgcttcttttaaaatgct 22209410  T
Q  225 taaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||  |||  |||||| ||||| |||||    
T  22209409 taaagagtgtcccggagacacttgttaataagac 22209376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 7528265 - 7528321
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  7528265 aatcaatgtattggaaatcgaaatatttgactttcgtaaagaataattacttatttt 7528321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 36348527 - 36348625
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  ||||||||| |||| ||| ||||| |||||||||||||||||||||| |   ||||||| ||||| |||  |||| |||||||||||||    
T  36348527 aatcaatgcattgaaaatcaaaatgtttaacttttttaaagaataattgcttattttagtgtgcttaaaaagtgccccggagacattcgttaacaagac 36348625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 258
Target Start/End: Complemental strand, 12782831 - 12782747
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||||||  ||||| ||||||||||||||| |||||| |   |||||||||||| ||||  |||| |||||||||||||    
T  12782831 aaatcgaaatattcaacttttttaaagaataattgcatattttagtatgcttaaagagtgttccggagacattcgttaacaagac 12782747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 216
Target Start/End: Complemental strand, 7043001 - 7042946
Alignment:
Q  162 tcaatgtcttgaaaatcgaaatatttgactttctt-aaagaataattgcttatttt 216  Q
    ||||||||||| |||||||||||||||||||| || |||| |||||||||||||||    
T  7043001 tcaatgtcttggaaatcgaaatatttgacttttttaaaaggataattgcttatttt 7042946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 9460522 - 9460468
Alignment:
Q  164 aatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||| |||||||||||||| |||||||||  |||||||||||||||| ||||||    
T  9460522 aatgtattgaaaatcgaaatgtttgacttttctaaagaataattgcttgttttgg 9460468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 257
Target Start/End: Original strand, 2445171 - 2445258
Alignment:
Q  169 cttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaaga 257  Q
    ||||||||||||||||||| |||||   ||| ||||||||||||||||  |  | ||||| |||| ||||| |||||||||||||||||    
T  2445171 cttgaaaatcgaaatatttaacttttaaaaaaaataattgcttattttaaaatgattaaaaagtg-tccgaagacactcgttaacaaga 2445258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 39093153 - 39093054
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttat-tttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  ||| || ||||||||||  ||||| ||||||||||||||||| | |||||   ||||||||||| | |||  ||||||||||||||||||    
T  39093153 aatcaatgcattggaactcgaaatattatacttttttaaagaataattgcttttgtttggtatgcttaaagagtaccccggggacactcgttaacaagac 39093054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 39691162 - 39691247
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaa 255  Q
    |||||||| ||| ||||||||||| |||||||||||||  ||| | ||||  ||||||||||||   ||| | |||||||||||||    
T  39691162 ttgaaaattgaactatttgacttttttaaagaataattttttaatgtggaatgcttaaagagtgtctcgagggcactcgttaacaa 39691247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 8e-22; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 162 - 263
Target Start/End: Original strand, 31902789 - 31902889
Alignment:
Q  162 tcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagacaca 261  Q
    ||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| || ||||||| ||||| |||  |||||||||||||||||| ||    
T  31902789 tcaatgtattgaaaattgaaatatttgactttcttaaggaataatttcttattttgaattgcttaaaaagtgccccg-ggacactcgttaacaagactca 31902887  T
Q  262 aa 263  Q
    ||    
T  31902888 aa 31902889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 37129809 - 37129952
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||| ||||||| |||||| ||||||||||||||  ||  ||| ||||||||| |||| ||||||||| ||||| ||||||||||||| |||||||||     
T  37129809 ttaagaaccataagtagtaagtatattatgaaaatgtatgtaattaatgtcttgtaaattgaaatatttaacttttttaaagaataatttcttattttgt 37129908  T
Q  219 at--agcttaaagagtgctccgatgacactcgttaacaagacac 260  Q
    ||  |||| |||||||  |  || ||||||||||||||||||||    
T  37129909 atagagctcaaagagtattttgaggacactcgttaacaagacac 37129952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 44719434 - 44719532
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||| ||  |||||||||| ||||||||| ||||| |||||||||| |||||||||| |||||| ||||| |||  | |||| |||||||||||    
T  44719434 aatcaatgttttagaaatcgaaatgtttgacttttttaaaaaataattgctaattttggataacttaaatagtgccccgggggcacttgttaacaagac 44719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 33887890 - 33887963
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtg 233  Q
    ||||||||  |||||||| ||||||||||||||| |||||||||||||  ||||||||||  ||||||||||||    
T  33887890 aatcaatgcattgaaaattgaaatatttgacttttttaaagaataattatttattttggaatgcttaaagagtg 33887963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Complemental strand, 40722417 - 40722353
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgc 234  Q
    |||||||| ||||||||||||||||||||||||||| | |||||||  ||| ||||||| |||||    
T  40722417 ttgaaaattgaaatatttgactttcttaaagaataaattcttatttcagattgcttaaaaagtgc 40722353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 39316135 - 39316073
Alignment:
Q  168 tcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaaga 230  Q
    |||||||||||||||||||||||||   |||||||||||| |||||||| ||  |||||||||    
T  39316135 tcttgaaaatcgaaatatttgacttcaataaagaataattacttattttagaatgcttaaaga 39316073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 28251965 - 28252035
Alignment:
Q  114 acttgttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatat 185  Q
    |||| |||||| ||||||||||||| ||| ||||||||||  ||| ||||||||  ||||||||||||||||    
T  28251965 actttttaagggccataattagtaagtat-ttatgaaaatgtatataatcaatgcattgaaaatcgaaatat 28252035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 42911118 - 42911072
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    |||||||| ||||| || |||||| ||||||||||||||||||||||    
T  42911118 ttgaaaattgaaatgttcgacttttttaaagaataattgcttatttt 42911072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 1360604 - 1360531
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtg 233  Q
    ||||||||  ||| ||||||||| |||| ||||| ||||| ||||||| || ||||||||  ||||||||||||    
T  1360604 aatcaatgcattggaaatcgaaacatttaacttttttaaaaaataattactaattttggaatgcttaaagagtg 1360531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 3256679 - 3256736
Alignment:
Q  174 aaatcgaaatatttgactttctt-aaagaataattgcttattttggatagcttaaaga 230  Q
    ||||||||| |||||||||| || ||||||||||||||||||||| |  |||||||||    
T  3256679 aaatcgaaacatttgactttttttaaagaataattgcttattttgaaatgcttaaaga 3256736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 10031959 - 10032059
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagaca 259  Q
    ||||||||  ||| ||||||||| |||| ||||| | ||| ||||||| || ||||||||  ||||||||||||  |||  | ||||||||||| |||||    
T  10031959 aatcaatgcattggaaatcgaaacatttaactttttaaaaaaataattactaattttggaatgcttaaagagtgtcccgggggcactcgttaacgagaca 10032058  T
Q  260 c 260  Q
    |    
T  10032059 c 10032059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 214
Target Start/End: Complemental strand, 15995974 - 15995902
Alignment:
Q  143 attatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgac-tttcttaaagaataattgcttatt 214  Q
    ||||||||||||  |  ||||||||  |||||||||||||||||| || ||| |||||||||| |||||||||    
T  15995974 attatgaaaatatgtgtaatcaatgcattgaaaatcgaaatatttaactttttttaaagaatagttgcttatt 15995902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 17098224 - 17098322
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttg-gatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||| ||||||| |||||||||||||||||||| ||||| ||||||||||||||||| ||| | ||||||||||| |||  ||||||||||||||||||    
T  17098224 aatcattgtcttggaaatcgaaatatttgacttttttaaataataattgcttattttgtgat-gtttaaagagtgccccggcgacactcgttaacaagac 17098322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 258
Target Start/End: Complemental strand, 2816294 - 2816148
Alignment:
Q  112 gcacttgttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgctt 211  Q
    ||||| ||||||  |||||| |||||||||| | |  ||||| |||  ||||| |||||||||||| ||||||||||| ||| |||||||||||||||||    
T  2816294 gcactcgttaagacccataaatagtaaatatttcaaaaaaatgcatgtaatcattgtcttgaaaattgaaatatttgatttttttaaagaataattgctt 2816195  T
Q  212 attttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
     ||||| |  ||||||||||| | ||| |  ||||||||||||||||    
T  2816194 cttttgaaatgcttaaagagtaccccggtagcactcgttaacaagac 2816148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 34032142 - 34032226
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||| ||||||||| ||||| ||||||||||||| |||||||| ||  ||||||||||||| || | ||||||||||||||||||    
T  34032142 aaattgaaatatttaacttttttaaagaataattacttattttagaatgcttaaagagtgccccaaggacactcgttaacaagac 34032226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 3758258 - 3758212
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||    
T  3758258 ttgaaaatcgaaatatttgacttttttaaagaataattgattatttt 3758212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 27016725 - 27016648
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgtta 251  Q
    |||| ||||| ||||||||| |||  |||||||| ||| |||||||  ||||||||||||| ||||||||||||||||    
T  27016725 aaattgaaatttttgacttttttatggaataatttcttcttttggaatgcttaaagagtgccccgatgacactcgtta 27016648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 27833288 - 27833376
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattg 208  Q
    |||||||||| || |||||| ||| |||||||||| |||  ||||||||  ||| ||||||||||||||||||||  |||||||||||||    
T  27833288 ttaaggaccacaaatagtaagtat-ttatgaaaatgcatgtaatcaatgcattgtaaatcgaaatatttgacttttgtaaagaataattg 27833376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 233
Target Start/End: Complemental strand, 36160377 - 36160314
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtg 233  Q
    ||||||||| ||| |||||||||| ||||| |||||||||||||||| ||  ||||||||||||    
T  36160377 ttgaaaatcaaaacatttgacttttttaaaaaataattgcttattttagaatgcttaaagagtg 36160314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 32017456 - 32017513
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttg 217  Q
    ||||||||  |||||||| ||||||||| ||||| ||||||||||||||||| |||||    
T  32017456 aatcaatgcattgaaaattgaaatattttacttttttaaagaataattgcttgttttg 32017513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 112586 - 112622
Alignment:
Q  222 gcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||||||| |||||||||||||||||||||||    
T  112586 gcttaaagagtgccccgatgacactcgttaacaagac 112622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 258
Target Start/End: Original strand, 25415916 - 25416000
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||||||||||||||||| |||||| |||||| || |||||  |  | ||||||||||| ||| |  ||||||||||||||||    
T  25415916 aaatcgaaatatttgacttttttaaagtataattactaattttaaaatgtttaaagagtgcgccggtagcactcgttaacaagac 25416000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 8761985 - 8761898
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaaga 257  Q
    |||||||| ||||||||| ||||| ||| ||||||||| ||| |||| ||   ||||||||||| ||||  ||||||| |||||||||    
T  8761985 ttgaaaattgaaatatttaacttttttatagaataatttctttttttagaatccttaaagagtgatccggagacactcattaacaaga 8761898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 26663689 - 26663647
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||    
T  26663689 aaatcgaaatatttgacttttttaaaaaataatttcttatttt 26663647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 26935284 - 26935242
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||    
T  26935284 aaatcgaaatatttgacttttttaaaaaataatttcttatttt 26935242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 25710852 - 25710888
Alignment:
Q  181 aatatttgactttcttaaagaataattgcttattttg 217  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  25710852 aatatttgaatttcttaaagaataatttcttattttg 25710888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 31372382 - 31372311
Alignment:
Q  183 tatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaa 255  Q
    |||||||||||  |||||||||||| ||||||||||||||||||||||||| ||| | |||||||||||||||    
T  31372382 tatttgacttttctaaagaataatttcttattttggatagcttaaagagtg-tcccaagacactcgttaacaa 31372311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 24658434 - 24658547
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||| ||||||| |||| | |||||||||||| | |||  ||| ||| ||||  |||||||||||||| ||||| ||||||||||||| ||||||||||    
T  24658434 ttaagaaccataaatagttagtatattatgaaa-tgcatgtaattaatatcttagaaatcgaaatatttaacttttttaaagaataatttcttattttgg 24658532  T
Q  219 atagcttaaagagtg 233  Q
    |||  ||||||||||    
T  24658533 ataatttaaagagtg 24658547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 228
Target Start/End: Original strand, 46188578 - 46188685
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||||||||||| |||||| ||| |||||||||| |||  | ||||||  | |||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  46188578 ttaaggaccataagtagtaagtat-ttatgaaaatgcatgtagtcaatgcatcgaaaatcgaa-tatttgactttcttaaacaataattacttattttgg 46188675  T
Q  219 atagcttaaa 228  Q
    |  |||||||    
T  46188676 aatgcttaaa 46188685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 48322204 - 48322316
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttgg 218  Q
    ||||||||||||| |||||  ||| ||||||||| ||||  ||||||||| ||| ||||||||| |||||||||| | ||| ||||||| |||||||| |    
T  48322204 ttaaggaccataagtagtaggtat-ttatgaaaaaacatgtaatcaatgtattggaaatcgaaacatttgactttttaaaaaaataattacttattttag 48322302  T
Q  219 atagcttaaagagt 232  Q
    |  |||||||||||    
T  48322303 aatgcttaaagagt 48322316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 170 - 257
Target Start/End: Complemental strand, 24313609 - 24313522
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaaga 257  Q
    |||||||| ||||  |||||| || |||||||||||||| ||| ||| ||  | ||||||||||| |||| |||||||||||||||||    
T  24313609 ttgaaaattgaaaactttgacatttttaaagaataattgtttaatttagaatgtttaaagagtgccccgaggacactcgttaacaaga 24313522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 25461539 - 25461441
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatattt-gactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||| || |||| |||| ||||||||| |||||| |||||||||||| |||||||||| |  | ||||||||||| |||| | ||||||||||||||||    
T  25461539 aatcattgccttggaaattgaaatattttgacttttttaaagaataatggcttattttgcaatgtttaaagagtgccccga-ggcactcgttaacaagac 25461441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 30463995 - 30464091
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||  || ||||| ||||| ||||||||| ||| ||||||||| ||| |||||||  |||||| |||||| ||||  |||||||||||||||||    
T  30463995 aatcaatgcattaaaaattgaaatgtttgacttttttatagaataatttcttcttttggaatgcttaacgagtgccccga--acactcgttaacaagac 30464091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 38457215 - 38457308
Alignment:
Q  119 ttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttatt 214  Q
    ||||| ||||||| |||||| ||| ||| ||||||||||  ||||||||  ||||||||| |||||||| | ||| ||||||||||||||||||||    
T  38457215 ttaagaaccataaatagtaagtat-ttacgaaaatacatgtaatcaatgcattgaaaatcaaaatatttaatttt-ttaaagaataattgcttatt 38457308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 46711906 - 46712008
Alignment:
Q  113 cacttgttaaggaccataattagtaaatatattatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgctta 212  Q
    ||||| ||||||||||||| ||  || ||| |||| ||||| |||  ||||||||  ||| ||||| |||| ||||||||| ||||||||||||| ||||    
T  46711906 cactttttaaggaccataaataacaagtat-ttataaaaatgcatgtaatcaatgcattggaaatcaaaatgtttgacttttttaaagaataattactta 46712004  T
Q  213 tttt 216  Q
    ||||    
T  46712005 tttt 46712008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 50368458 - 50368500
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||    
T  50368458 aaatcaaaatatttgacttttttaaagaataattacttatttt 50368500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 258
Target Start/End: Complemental strand, 45757972 - 45757899
Alignment:
Q  185 tttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    |||||| || |||||||||||||||||| |||     |||||||||||| ||||  ||||||||||||||||||    
T  45757972 tttgacatttttaaagaataattgcttaatttaacatgcttaaagagtgatccggagacactcgttaacaagac 45757899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Complemental strand, 48551098 - 48551013
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaa 255  Q
    |||||||| ||||  |||||| || ||||||||||||| |||| ||| |   ||||||||||||||| |  |||||||||||||||    
T  48551098 ttgaaaattgaaaactttgacatttttaaagaataatttcttaatttagcatgcttaaagagtgctctggggacactcgttaacaa 48551013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 255
Target Start/End: Original strand, 50217019 - 50217104
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaa 255  Q
    ||||||||||||||  |||||||  ||||||||||||||||| |||| |   | |||||||||||||    |||||||||||||||    
T  50217019 ttgaaaatcgaaatgattgacttctttaaagaataattgcttgttttagtatgtttaaagagtgctcttgggacactcgttaacaa 50217104  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 52309047 - 52308986
Alignment:
Q  197 aaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagac 258  Q
    ||||||||||||||| ||||||   ||||||||||||| |||  | ||||||||||||||||    
T  52309047 aaagaataattgcttgttttggtatgcttaaagagtgccccgggggcactcgttaacaagac 52308986  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 3996025 - 3996097
Alignment:
Q  189 actttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagacaca 261  Q
    ||||| |||| ||||||||||||| || ||| | ||||||||||||||  | | |||| ||||||||||||||    
T  3996025 acttttttaaggaataattgcttaattgggaaaccttaaagagtgctcttagggcacttgttaacaagacaca 3996097  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 37708521 - 37708449
Alignment:
Q  144 ttatgaaaatacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttatttt 216  Q
    |||| |||||||||  ||||| ||  |||||||| ||||| ||| ||||| ||||||| ||||||||||||||    
T  37708521 ttataaaaatacatgtaatcagtgcattgaaaattgaaatgtttaacttttttaaagactaattgcttatttt 37708449  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 207
Target Start/End: Complemental strand, 40546431 - 40546348
Alignment:
Q  124 gaccataattagtaaatatattatgaaaa-tacatacaatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataatt 207  Q
    |||||||| |||||| ||| ||||||||| | |||  ||||||||  ||| |||||||||||||||||||| ||||| |||||||    
T  40546431 gaccataagtagtaagtat-ttatgaaaaatgcatgtaatcaatgcattggaaatcgaaatatttgacttttttaaaaaataatt 40546348  T

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Target: scaffold0009 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 189123 - 189059
Alignment:
Q  174 aaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccg 238  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||  |  |||||||||||| ||||    
T  189123 aaatagaaatatttaacttttttaaagaataattgcttattttaaaatgcttaaagagtgttccg 189059  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 257
Target Start/End: Original strand, 138076 - 138163
Alignment:
Q  170 ttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaaga 257  Q
    |||||||| ||||||||||| ||| || || ||||||||||||||| |||   |||||| |||||||||   ||||| ||||||||||    
T  138076 ttgaaaattgaaatatttgatttttttgaataataattgcttatttaggaatacttaaaaagtgctccggaaacacttgttaacaaga 138163  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 15932 - 15980
Alignment:
Q  159 caatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataatt 207  Q
    |||||||||| |||||||||||||||||| || || || ||||||||||    
T  15932 caatcaatgttttgaaaatcgaaatatttaacatttttcaagaataatt 15980  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 14005 - 13909
Alignment:
Q  160 aatcaatgtcttgaaaatcgaaatatttgactttcttaaagaataattgcttattttggatagcttaaagagtgctccgatgacactcgttaacaagaca 259  Q
    ||||||| | |||||||| ||||||||| |||||   || |||||||| |||||||| ||| |||||||||||| | ||  | |||||||||||||||||    
T  14005 aatcaatatattgaaaattgaaatatttaacttta--aatgaataattacttattttagattgcttaaagagtg-ttcgggggcactcgttaacaagaca 13909  T

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