View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8097_low_12 (Length: 220)
Name: NF8097_low_12
Description: NF8097
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8097_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 33 - 202
Target Start/End: Original strand, 41899453 - 41899623
Alignment:
| Q |
33 |
ttggattagattaaatttttatgggnnnnnnn-taattctattagttnnnnnnngtctttcgaatgagcagaatagacctaacaacagttccaatgtaca |
131 |
Q |
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| T |
41899453 |
ttggattagattaaatttttatgggaaaaaaaataattctattagttaaaaaaagtctttcgaatgagcagaatagacttaacaacagttccaatataca |
41899552 |
T |
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| Q |
132 |
atataatacgaagaatgtttagaacaaaacaaacttttgaattgagaatgaaacaaaatgatacaataggg |
202 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41899553 |
atataatacgaagaatgtttagaacaaaacaaacttttgaattgagaatgaaacaaaatgatacaataggg |
41899623 |
T |
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