View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8098_low_2 (Length: 388)
Name: NF8098_low_2
Description: NF8098
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8098_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 66 - 372
Target Start/End: Original strand, 37746632 - 37746938
Alignment:
| Q |
66 |
gtttggtggtttatgacatatgcattatctttttgcatttgatttaattggaccttggtgtttatgctcaaaatatggtgagaaacaatttggagcaaaa |
165 |
Q |
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| T |
37746632 |
gtttggtggtttatgacatatgcattatctttttgcatttgatttaattggaccttggtgtttatgctcaaaatatggtgagaaacaatttggagcaaaa |
37746731 |
T |
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| Q |
166 |
actcttaaacccactattcctgctgcgtttatgttctcataatttgagaattagagtttataatgtatttccttttaactttataatttgtttgtgttac |
265 |
Q |
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| T |
37746732 |
actcttaaacccactattcctgctgcgtttatgttctcataatttgagaattagagtttataatgtatttccttttaactttataatttgtttgtgttac |
37746831 |
T |
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| Q |
266 |
ttttgtgactttaaagatacacgtttattttctatcatcattttctcttgtatcatattactacataatcaccttattttctattcattttttgttactt |
365 |
Q |
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| T |
37746832 |
ttttgtgactttaaagatacacgtttattttctatcatcattttctcttgtatcatattactacataatcaccttattttctattcattttttgttactt |
37746931 |
T |
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| Q |
366 |
tatttct |
372 |
Q |
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| T |
37746932 |
tatttct |
37746938 |
T |
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