View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8099_high_3 (Length: 491)

Name: NF8099_high_3
Description: NF8099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8099_high_3
NF8099_high_3
[»] chr1 (44 HSPs)
chr1 (225-485)||(4971475-4971735)
chr1 (285-485)||(23185423-23185623)
chr1 (286-485)||(5027545-5027746)
chr1 (286-485)||(5316676-5316875)
chr1 (286-485)||(14146296-14146495)
chr1 (286-485)||(3406414-3406614)
chr1 (286-485)||(3440206-3440406)
chr1 (285-485)||(17168952-17169152)
chr1 (285-485)||(44655737-44655937)
chr1 (286-485)||(6771787-6771989)
chr1 (286-485)||(19955713-19955912)
chr1 (293-481)||(16140055-16140243)
chr1 (311-485)||(41697080-41697254)
chr1 (301-485)||(1366812-1366995)
chr1 (293-485)||(50881426-50881617)
chr1 (284-485)||(40501705-40501907)
chr1 (373-485)||(9173028-9173140)
chr1 (373-485)||(9181010-9181122)
chr1 (371-483)||(27559635-27559747)
chr1 (286-460)||(21740852-21741029)
chr1 (293-485)||(51607365-51607557)
chr1 (283-485)||(13913395-13913599)
chr1 (286-448)||(6889644-6889805)
chr1 (286-448)||(6891490-6891651)
chr1 (286-446)||(22865378-22865538)
chr1 (286-485)||(27906646-27906834)
chr1 (368-469)||(38547036-38547137)
chr1 (18-150)||(4971277-4971406)
chr1 (373-485)||(44895648-44895754)
chr1 (368-469)||(39134722-39134824)
chr1 (368-469)||(45758506-45758607)
chr1 (389-467)||(5533326-5533404)
chr1 (376-464)||(38853539-38853627)
chr1 (389-469)||(43235791-43235871)
chr1 (368-469)||(50146308-50146409)
chr1 (373-469)||(33170771-33170867)
chr1 (293-357)||(34247151-34247215)
chr1 (388-469)||(26803960-26804038)
chr1 (390-453)||(35392298-35392361)
chr1 (368-469)||(6221690-6221790)
chr1 (368-429)||(17322623-17322684)
chr1 (390-466)||(10925976-10926052)
chr1 (286-335)||(9172940-9172989)
chr1 (286-335)||(9180922-9180971)
[»] chr8 (34 HSPs)
chr8 (294-485)||(45475802-45475993)
chr8 (283-485)||(23606545-23606747)
chr8 (293-485)||(13534613-13534804)
chr8 (293-485)||(13624153-13624344)
chr8 (286-485)||(10917376-10917575)
chr8 (285-485)||(23798178-23798379)
chr8 (286-485)||(2952137-2952339)
chr8 (293-485)||(30883314-30883508)
chr8 (297-485)||(5860671-5860862)
chr8 (286-485)||(41879166-41879364)
chr8 (286-485)||(37430076-37430276)
chr8 (286-485)||(42600767-42600967)
chr8 (286-485)||(3048435-3048635)
chr8 (368-469)||(7944523-7944624)
chr8 (374-469)||(8102913-8103008)
chr8 (286-357)||(20003728-20003799)
chr8 (368-469)||(5973108-5973209)
chr8 (389-469)||(5942697-5942777)
chr8 (368-469)||(11290185-11290286)
chr8 (368-469)||(39332406-39332507)
chr8 (375-469)||(5721560-5721654)
chr8 (368-469)||(15167416-15167517)
chr8 (374-469)||(15078759-15078854)
chr8 (368-469)||(41677174-41677276)
chr8 (375-464)||(34789870-34789959)
chr8 (374-469)||(25561502-25561595)
chr8 (368-446)||(30674404-30674482)
chr8 (368-461)||(8646215-8646307)
chr8 (373-469)||(23941097-23941193)
chr8 (368-469)||(14509984-14510084)
chr8 (397-433)||(5757117-5757153)
chr8 (368-412)||(9108551-9108595)
chr8 (374-413)||(34868184-34868223)
chr8 (368-466)||(34048706-34048806)
[»] chr7 (35 HSPs)
chr7 (286-485)||(29077205-29077404)
chr7 (293-485)||(8171464-8171656)
chr7 (286-485)||(18776683-18776883)
chr7 (286-485)||(12596207-12596404)
chr7 (286-485)||(20091197-20091398)
chr7 (283-485)||(23550985-23551188)
chr7 (286-485)||(10329327-10329527)
chr7 (286-485)||(10955469-10955671)
chr7 (286-448)||(26254015-26254178)
chr7 (293-485)||(24525606-24525802)
chr7 (286-485)||(48983756-48983961)
chr7 (286-481)||(47984885-47985083)
chr7 (368-485)||(38414876-38414993)
chr7 (288-485)||(8239670-8239869)
chr7 (294-485)||(19692079-19692271)
chr7 (286-465)||(28749715-28749895)
chr7 (286-485)||(25010418-25010611)
chr7 (368-447)||(33162339-33162418)
chr7 (388-466)||(9021820-9021898)
chr7 (368-469)||(7398452-7398553)
chr7 (368-469)||(2611262-2611363)
chr7 (374-466)||(23859077-23859169)
chr7 (374-469)||(36891579-36891674)
chr7 (368-458)||(6765681-6765771)
chr7 (374-469)||(12981327-12981422)
chr7 (368-458)||(23744808-23744898)
chr7 (368-466)||(36902924-36903022)
chr7 (368-469)||(27237423-27237524)
chr7 (293-357)||(40357304-40357368)
chr7 (374-465)||(20153206-20153297)
chr7 (376-454)||(21763595-21763673)
chr7 (373-469)||(18201138-18201234)
chr7 (388-468)||(23020504-23020583)
chr7 (390-468)||(38971255-38971333)
chr7 (368-469)||(12419495-12419596)
[»] scaffold0070 (1 HSPs)
scaffold0070 (286-485)||(1328-1527)
[»] chr6 (23 HSPs)
chr6 (284-485)||(27788606-27788806)
chr6 (286-485)||(13727317-13727517)
chr6 (286-485)||(21479482-21479683)
chr6 (285-485)||(21280533-21280734)
chr6 (284-480)||(20711636-20711833)
chr6 (293-485)||(19737619-19737810)
chr6 (300-485)||(28075771-28075960)
chr6 (286-485)||(30832443-30832642)
chr6 (286-485)||(17353942-17354142)
chr6 (286-485)||(24710914-24711117)
chr6 (298-485)||(33774105-33774294)
chr6 (286-447)||(27314097-27314259)
chr6 (288-465)||(1155767-1155947)
chr6 (368-485)||(34397845-34397962)
chr6 (294-485)||(235151-235343)
chr6 (373-469)||(2477590-2477686)
chr6 (373-469)||(6159442-6159538)
chr6 (378-469)||(21183686-21183777)
chr6 (374-469)||(20611794-20611889)
chr6 (390-468)||(4036953-4037031)
chr6 (293-485)||(19987149-19987329)
chr6 (368-452)||(30121783-30121867)
chr6 (423-467)||(27994775-27994819)
[»] chr5 (43 HSPs)
chr5 (284-485)||(38869277-38869478)
chr5 (286-485)||(36187795-36187994)
chr5 (284-485)||(27078996-27079199)
chr5 (294-485)||(34756289-34756481)
chr5 (284-485)||(16591988-16592189)
chr5 (293-485)||(19523184-19523377)
chr5 (293-485)||(30854314-30854507)
chr5 (286-485)||(15480006-15480204)
chr5 (293-485)||(2274875-2275068)
chr5 (294-485)||(16198717-16198909)
chr5 (295-485)||(9364276-9364467)
chr5 (287-485)||(28822253-28822457)
chr5 (286-485)||(16799240-16799442)
chr5 (286-465)||(31194528-31194706)
chr5 (284-470)||(22986471-22986658)
chr5 (300-485)||(27924067-27924253)
chr5 (371-481)||(40389537-40389647)
chr5 (286-485)||(7670909-7671118)
chr5 (284-465)||(31881346-31881528)
chr5 (330-472)||(23284022-23284164)
chr5 (300-448)||(7338021-7338170)
chr5 (368-467)||(36868874-36868973)
chr5 (368-466)||(2024640-2024738)
chr5 (368-469)||(14318383-14318484)
chr5 (374-469)||(2530901-2530996)
chr5 (368-469)||(34425904-34426005)
chr5 (374-466)||(26718953-26719045)
chr5 (374-466)||(26988697-26988789)
chr5 (368-469)||(1366524-1366625)
chr5 (368-469)||(2412089-2412190)
chr5 (368-469)||(33037781-33037882)
chr5 (374-468)||(24395741-24395835)
chr5 (388-461)||(10543682-10543755)
chr5 (368-452)||(22648734-22648818)
chr5 (389-469)||(41911636-41911716)
chr5 (368-467)||(10407464-10407563)
chr5 (368-469)||(11242316-11242417)
chr5 (294-351)||(40389461-40389518)
chr5 (368-469)||(40794325-40794426)
chr5 (389-469)||(15639644-15639724)
chr5 (368-413)||(606211-606256)
chr5 (286-357)||(23283943-23284014)
chr5 (373-453)||(17344973-17345053)
[»] chr4 (53 HSPs)
chr4 (300-482)||(43455463-43455645)
chr4 (286-481)||(54780771-54780968)
chr4 (280-485)||(47128977-47129182)
chr4 (278-485)||(32128574-32128782)
chr4 (286-485)||(34027569-34027768)
chr4 (293-485)||(34768499-34768691)
chr4 (285-485)||(37777139-37777340)
chr4 (293-485)||(1105522-1105714)
chr4 (286-485)||(32915375-32915575)
chr4 (298-485)||(38209520-38209708)
chr4 (286-485)||(5128758-5128959)
chr4 (286-485)||(10978890-10979092)
chr4 (286-485)||(37514649-37514848)
chr4 (286-485)||(54083160-54083359)
chr4 (286-478)||(2790659-2790851)
chr4 (285-485)||(19498494-19498692)
chr4 (286-485)||(48209230-48209436)
chr4 (286-485)||(10428116-10428322)
chr4 (284-485)||(35779243-35779442)
chr4 (286-485)||(16845011-16845210)
chr4 (293-485)||(40089506-40089707)
chr4 (286-485)||(16882313-16882512)
chr4 (286-443)||(17679432-17679589)
chr4 (297-485)||(35465097-35465284)
chr4 (376-485)||(13460197-13460306)
chr4 (293-485)||(38352190-38352372)
chr4 (286-485)||(55255259-55255447)
chr4 (387-469)||(4167910-4167992)
chr4 (302-447)||(51964736-51964884)
chr4 (286-448)||(16922245-16922409)
chr4 (368-469)||(51691915-51692018)
chr4 (371-485)||(24969427-24969531)
chr4 (368-469)||(52468292-52468393)
chr4 (373-463)||(36178684-36178774)
chr4 (416-485)||(23509846-23509915)
chr4 (373-469)||(27112036-27112132)
chr4 (373-469)||(36118463-36118559)
chr4 (368-446)||(39655254-39655332)
chr4 (368-431)||(9578664-9578728)
chr4 (368-469)||(10042000-10042101)
chr4 (388-469)||(24396940-24397021)
chr4 (388-461)||(36362891-36362964)
chr4 (373-469)||(2135326-2135422)
chr4 (283-421)||(23508424-23508564)
chr4 (389-469)||(37744931-37745011)
chr4 (388-469)||(40217238-40217319)
chr4 (368-468)||(39329392-39329492)
chr4 (285-356)||(24969716-24969787)
chr4 (388-469)||(29425194-29425275)
chr4 (285-341)||(13460305-13460361)
chr4 (373-469)||(45656181-45656277)
chr4 (368-410)||(24614018-24614060)
chr4 (368-408)||(30507122-30507162)
[»] chr2 (32 HSPs)
chr2 (283-485)||(29939778-29939980)
chr2 (285-485)||(4505878-4506079)
chr2 (293-485)||(6964991-6965182)
chr2 (286-485)||(3155201-3155401)
chr2 (293-485)||(3952990-3953181)
chr2 (293-485)||(10762492-10762683)
chr2 (284-485)||(27506657-27506858)
chr2 (286-485)||(12337365-12337566)
chr2 (286-481)||(26716116-26716313)
chr2 (285-485)||(7162768-7162968)
chr2 (286-485)||(8906996-8907197)
chr2 (310-481)||(9046017-9046189)
chr2 (283-485)||(24410420-24410626)
chr2 (293-443)||(40636164-40636314)
chr2 (293-453)||(34693991-34694151)
chr2 (293-453)||(34716403-34716563)
chr2 (293-443)||(5952643-5952791)
chr2 (368-469)||(16097008-16097109)
chr2 (368-467)||(24035546-24035645)
chr2 (368-469)||(13800545-13800647)
chr2 (368-469)||(28425711-28425812)
chr2 (368-469)||(38400798-38400899)
chr2 (368-469)||(16227369-16227470)
chr2 (392-469)||(12134065-12134142)
chr2 (368-469)||(21665701-21665802)
chr2 (395-463)||(22727530-22727598)
chr2 (368-469)||(7742134-7742236)
chr2 (400-469)||(37182670-37182739)
chr2 (293-413)||(8327674-8327794)
chr2 (368-469)||(11912758-11912859)
chr2 (368-446)||(42029168-42029246)
chr2 (298-398)||(1396629-1396730)
[»] scaffold0039 (1 HSPs)
scaffold0039 (286-485)||(106523-106723)
[»] chr3 (38 HSPs)
chr3 (286-485)||(47467672-47467872)
chr3 (286-485)||(21582759-21582960)
chr3 (285-485)||(54619120-54619321)
chr3 (285-485)||(8073256-8073455)
chr3 (286-485)||(43207157-43207355)
chr3 (285-485)||(38681010-38681211)
chr3 (286-485)||(34290554-34290754)
chr3 (293-485)||(44708465-44708657)
chr3 (287-485)||(3953816-3954014)
chr3 (286-485)||(27078486-27078687)
chr3 (286-485)||(27084283-27084484)
chr3 (286-485)||(36715942-36716143)
chr3 (286-485)||(50939152-50939351)
chr3 (298-485)||(18372467-18372658)
chr3 (284-485)||(53149230-53149432)
chr3 (293-481)||(37168359-37168548)
chr3 (285-485)||(42098789-42098990)
chr3 (373-485)||(53506890-53507002)
chr3 (323-485)||(9878643-9878805)
chr3 (286-485)||(54407073-54407275)
chr3 (293-465)||(36605973-36606145)
chr3 (286-474)||(50258542-50258731)
chr3 (402-483)||(29620423-29620504)
chr3 (368-469)||(54574828-54574929)
chr3 (293-485)||(48157127-48157309)
chr3 (374-469)||(8420330-8420425)
chr3 (374-469)||(32319162-32319257)
chr3 (368-469)||(26279544-26279647)
chr3 (286-357)||(48720429-48720500)
chr3 (374-464)||(28689368-28689458)
chr3 (286-348)||(29620364-29620426)
chr3 (368-469)||(789940-790041)
chr3 (368-464)||(49393099-49393194)
chr3 (378-431)||(23641329-23641382)
chr3 (368-469)||(25855426-25855526)
chr3 (368-442)||(42453435-42453509)
chr3 (300-354)||(53506815-53506869)
chr3 (368-469)||(52374660-52374761)
[»] scaffold1590 (1 HSPs)
scaffold1590 (368-469)||(259-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (374-469)||(206496-206591)
[»] scaffold0018 (1 HSPs)
scaffold0018 (373-469)||(173516-173612)
[»] scaffold0097 (1 HSPs)
scaffold0097 (373-469)||(38926-39022)
[»] scaffold0001 (2 HSPs)
scaffold0001 (286-424)||(183106-183244)
scaffold0001 (420-485)||(181904-181969)
[»] scaffold0182 (1 HSPs)
scaffold0182 (368-467)||(23994-24093)
[»] scaffold0007 (1 HSPs)
scaffold0007 (368-468)||(230860-230960)
[»] scaffold1320 (1 HSPs)
scaffold1320 (374-469)||(1355-1450)
[»] scaffold0022 (2 HSPs)
scaffold0022 (389-469)||(40086-40166)
scaffold0022 (389-469)||(138146-138226)
[»] scaffold0003 (1 HSPs)
scaffold0003 (393-446)||(351360-351413)
[»] scaffold0227 (2 HSPs)
scaffold0227 (368-412)||(16123-16167)
scaffold0227 (402-469)||(16028-16095)


Alignment Details
Target: chr1 (Bit Score: 177; Significance: 3e-95; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 225 - 485
Target Start/End: Original strand, 4971475 - 4971735
Alignment:
Q  225 ctaagacaacccataacctcgtctctcctctcccaatgtaaacttgcctcctgcctccaatcagggctgtccctgagaatttggaggctcggctcgggga 324  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||    
T  4971475 ctaagacagcccataacctcgtctctactctcccaatgtaaacttgcctcctgcctccaatcagggctgtccctgagaattctgaggctcggttcgggga 4971574  T
Q  325 atgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatg 424  Q
    ||||||||||  ||||| |||||||||||| ||          ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  4971575 atgaaaagagaccagtgataaaatcaaaacatatttttttttaaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatg 4971674  T
Q  425 cggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  4971675 cggtacacccataagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 4971735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 23185623 - 23185423
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctatt 384  Q
    ||||||| || |||||||||| |||||||||||||| ||| |||||||||| ||||| |||||||||||||||        | |||||||||||||||||    
T  23185623 tcagggccgttcctgagaattcggaggctcggctcgaggattgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatt 23185524  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23185523 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 23185424  T
Q  485 a 485  Q
    |    
T  23185423 a 23185423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 5027746 - 5027545
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||||||          | ||||||||||||||||    
T  5027746 cagggccgtccctgagaattcggaggctcgactcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 5027647  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5027646 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgaggaacccccacctaacacca 5027547  T
Q  484 aa 485  Q
    ||    
T  5027546 aa 5027545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 5316875 - 5316676
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||||||||||||| |    |||||||||||||||||||| |||||||||||||||        | |||||||||||||||||     
T  5316875 cagggccgtccctgagaatttggaggctcgaccttaggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 5316776  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5316775 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 5316676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 14146495 - 14146296
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| |||||||||||||  |||||||||||||| ||||| |||||||||||||||        | |||||| ||||||||||     
T  14146495 cagggccgtccctgagaattcggaggctcggctcttggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcgatgttctattt 14146396  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  14146395 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 14146296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 3406614 - 3406414
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||          | |||||| ||||||||||    
T  3406614 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatt 3406515  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3406514 tatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 3406415  T
Q  485 a 485  Q
    |    
T  3406414 a 3406414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 3440206 - 3440406
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||||          | |||||| ||||||||||    
T  3440206 cagggctgtccctgagaatttggaggctcagctcggggaatgaaaagaggtcagtgataaaatgaaaacgtttttttttttaaaagagcgatgttctatt 3440305  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3440306 tatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 3440405  T
Q  485 a 485  Q
    |    
T  3440406 a 3440406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 17169152 - 17168952
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctatt 384  Q
    ||||||| |||||| |||||| ||||||||||||| || |||||||||||||||||| |||||||||||||||        | || ||||||||||||||    
T  17169152 tcagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatt 17169053  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||| ||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17169052 tatattttttaaaagataaatataaggtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgaggaacccctacctaacaccaa 17168953  T
Q  485 a 485  Q
    |    
T  17168952 a 17168952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 44655937 - 44655737
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctatt 384  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||  ||||| |||||||||||| ||        | |||||||||||||||||    
T  44655937 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagagaccagtgataaaatcaaaacataatttttttaaaagagcaatgttctatt 44655838  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||    
T  44655837 tatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaa 44655738  T
Q  485 a 485  Q
    |    
T  44655737 a 44655737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 6771989 - 6771787
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag---aagagcaatgttcta 382  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||||              |||||| ||||||||    
T  6771989 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtgttttttttttttaaagagcgatgttcta 6771890  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||| ||||||||||||    
T  6771889 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgaggaacctccacctaacacc 6771790  T
Q  483 aaa 485  Q
    |||    
T  6771789 aaa 6771787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 19955912 - 19955713
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    ||||||||||||| |||||| ||||||||||||| | ||||||||||||| ||||| ||||||||||||| |          || ||||||| ||||||     
T  19955912 cagggctgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaaagcaatgatctattt 19955813  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  19955812 atattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaa 19955713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 293 - 481
Target Start/End: Complemental strand, 16140243 - 16140055
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | ||| |||||||||||||||        | |||||  |||||||||| |||||||    
T  16140243 gtccctgagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatatttt 16140144  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||    
T  16140143 ttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacctaacac 16140055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 311 - 485
Target Start/End: Original strand, 41697080 - 41697254
Alignment:
Q  311 gctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaaaagataaatacaag 410  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||        | |||||| |||||||||| ||||||||||||||||||||||||     
T  41697080 gctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatattttttaaaagataaatacaaa 41697179  T
Q  411 gtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||  ||||||||||| ||||| ||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  41697180 gtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 41697254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 301 - 485
Target Start/End: Original strand, 1366812 - 1366995
Alignment:
Q  301 gaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaaaaga 400  Q
    |||||||||||||| |||| ||||||||||||||| ||||| |||| | ||||| ||          ||||||||||||||||| |||||||||||||||    
T  1366812 gaatttggaggctcagctctgggaatgaaaagaggccagtgataaattgaaaacatattttttttt-aagagcaatgttctatttatattttttaaaaga 1366910  T
Q  401 taaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||||||| |||||| ||||||||||||||||||||||||    
T  1366911 taaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaacccccacctaacaccaaa 1366995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 50881617 - 50881426
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||| ||||  ||        | ||||||||||||||||| |||||||    
T  50881617 gtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaattaaaatctatttttttaa-aagagcaatgttctatttatatttt 50881519  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  50881518 ttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgaggaacctccacctaacaccaaa 50881426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 284 - 485
Target Start/End: Original strand, 40501705 - 40501907
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaaga-gcaatgttcta 382  Q
    |||||||| |||||| |||||| ||||||||| ||| | ||||||||||||||||||| |||||||||||||||        | || | | |||| ||||    
T  40501705 atcagggccgtccctaagaattcggaggctcgactctgagaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgatcta 40501804  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||| ||||||||| ||||| ||||||||||||    
T  40501805 tttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacctaacacc 40501904  T
Q  483 aaa 485  Q
    |||    
T  40501905 aaa 40501907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 9173028 - 9173140
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccccc 472  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  9173028 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaaccccc 9173127  T
Q  473 acctaacaccaaa 485  Q
    |||||||||||||    
T  9173128 acctaacaccaaa 9173140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 9181010 - 9181122
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccccc 472  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||    
T  9181010 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaaccccc 9181109  T
Q  473 acctaacaccaaa 485  Q
    |||||||||||||    
T  9181110 acctaacaccaaa 9181122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 371 - 483
Target Start/End: Complemental strand, 27559747 - 27559635
Alignment:
Q  371 agcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccc 470  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  27559747 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccc 27559648  T
Q  471 ccacctaacacca 483  Q
    |||||||||||||    
T  27559647 ccacctaacacca 27559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 286 - 460
Target Start/End: Original strand, 21740852 - 21741029
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn---agaagagcaatgttcta 382  Q
    |||||| |||| |||||||| ||||||||||||| | ||||||||||||| ||||| ||||||||||| |||           | |||||||||||||||    
T  21740852 cagggccgtccttgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaatgtatttttttttttaaaagagcaatgttcta 21740951  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatataca 460  Q
    ||  |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  21740952 tttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 51607365 - 51607557
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||| | |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||        | || |  |||||| |||| |||||||    
T  51607365 gtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaa-aatgttttatttatatttt 51607463  T
Q  393 ttaaaagataaatacaaggtg-ccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| |||||| |||||||||||||||||||||| | ||||||||||||||| |||||||||||||| |||| |||| ||||||    
T  51607464 ttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactcccatctaataccaaa 51607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 485
Target Start/End: Original strand, 13913395 - 13913599
Alignment:
Q  283 aatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttcta 382  Q
    ||||| ||| |||||| |||||| ||||||| ||||| | ||||||||||| | ||||| ||||||||||| |||        | || ||||||| ||||    
T  13913395 aatcaaggccgtccctaagaattcggaggcttggctctgagaatgaaaagatgccagtgataaaatcaaaatgtattttttttaaaaaagcaatgatcta 13913494  T
Q  383 ttgatattttttaaaagataaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaaca 480  Q
    || ||||||||||||||||||||| ||| |||||  ||||||||||||||||| | | ||||||||||||||| |||||||||| |||||||||||||||    
T  13913495 tttatattttttaaaagataaatataagttgccgggtatatatgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacctaaca 13913594  T
Q  481 ccaaa 485  Q
    |||||    
T  13913595 ccaaa 13913599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 448
Target Start/End: Complemental strand, 6889805 - 6889644
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||| ||| |||| |||||||||| || | ||||||||||||||||||| |||||||||||||||        | |||||||||||||||||     
T  6889805 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaa-aagagcaatgttctattt 6889707  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatga 448  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| ||| ||||||||||||    
T  6889706 atattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatga 6889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 448
Target Start/End: Complemental strand, 6891651 - 6891490
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||| ||| |||| |||||||||| || | ||||||||||||||||||| |||||||||||||||        | |||||||||||||||||     
T  6891651 cagggccgtccttgaaaattcggaggctcggttctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaa-aagagcaatgttctattt 6891553  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatga 448  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| ||| ||||||||||||    
T  6891552 atattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatga 6891490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 286 - 446
Target Start/End: Original strand, 22865378 - 22865538
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| |||||| |||||| |||||||||||||||||| || |||||||||||||||         | |||||||||||||||||    
T  22865378 cagggccgtccctgagaattcggaggcacggctctgggaatgaaaagaggtcaatgataaaatcaaaacgtattttttttcaaaagagcaatgttctatt 22865477  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaat 446  Q
     ||||||||||||||||||||||||| |||  ||||||| ||||||||||| ||||||||||    
T  22865478 tatattttttaaaagataaatacaagatgctctatatat-cggtacacccaaaggtgaaaat 22865538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 27906646 - 27906834
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||| |  |||||||||||| ||||| |||||||||||| ||         | ||||||||||||| |||    
T  27906646 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 27906745  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||             |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27906746 tatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 27906833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 38547036 - 38547137
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||| |||| |||||||||||||||    
T  38547036 aagatcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgaggaa 38547135  T
Q  468 cc 469  Q
    ||    
T  38547136 cc 38547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 4971277 - 4971406
Alignment:
Q  18 aaattacggattgtattgatttttatgataatataaacttaattcattaaaagtctcaaacgtnnnnnnnncaatcaacgaagttccatataactcaatc 117  Q
    |||||||||||| ||||||||||||||||||||  |||||||||||||||||| |||||||||        ||||||||||||||||| | ||| |||||    
T  4971277 aaattacggattttattgatttttatgataata--aacttaattcattaaaagcctcaaacgtaaaaaaa-caatcaacgaagttccacacaacccaatc 4971373  T
Q  118 aattcatgtcacatgaaacattcgcaaagtttt 150  Q
    ||||||||||| |||||||||||||||||||||    
T  4971374 aattcatgtcaaatgaaacattcgcaaagtttt 4971406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 373 - 485
Target Start/End: Complemental strand, 44895754 - 44895648
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccccc 472  Q
    ||||| |||||| ||||||||||||||||||||| |||||| ||  |      |||||||||| |||||||||||| |||| ||||||||||||||||||    
T  44895754 caatgatctatttatattttttaaaagataaatataaggtggcgggt------ggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccccc 44895661  T
Q  473 acctaacaccaaa 485  Q
    |||||||||||||    
T  44895660 acctaacaccaaa 44895648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 39134722 - 39134824
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    |||| |||||||||||| | ||||||||||| |||||||||||||||| ||||||||||  |||||||| |||||| ||| |||||  ||||||||||||    
T  39134722 aagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgagga 39134821  T
Q  467 acc 469  Q
    |||    
T  39134822 acc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 45758607 - 45758506
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||| |||||||  |||||||||   |||| ||| |||||||||| |||||| |||||||||||||    
T  45758607 aagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgaggaa 45758508  T
Q  468 cc 469  Q
    ||    
T  45758507 cc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 5533404 - 5533326
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||||||||||||||| |||||||||||||||||||  |||||  || |||||||||| |||||| |||||||||||||    
T  5533404 ttttttaaaagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgaggaa 5533326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 376 - 464
Target Start/End: Complemental strand, 38853627 - 38853539
Alignment:
Q  376 tgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgag 464  Q
    ||||||||| | |||||||||| ||||||||||||||| ||||||||||  ||| | ||| |||||||||| |||||| ||||||||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgag 38853539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 43235791 - 43235871
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||| ||||||||||||||| || ||||||||||  ||||||||| |||||||||| |||| | |||||||||||||||    
T  43235791 tttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 50146409 - 50146308
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | | ||||| |||||||||| ||||||||||| |||||| | || ||||| |||| ||||| | |||| |||||||||||||    
T  50146409 aagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgaggaa 50146310  T
Q  468 cc 469  Q
    ||    
T  50146309 cc 50146308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 469
Target Start/End: Complemental strand, 33170867 - 33170771
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||| |||| | |||||||||||  ||||||||| |||  |||||||||||||||||| |  ||||||||| |||||| |||||||||| ||||    
T  33170867 caatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgagaaacc 33170771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 34247215 - 34247151
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgta 357  Q
    |||| |||||||| ||||||||||||| || |||||||| ||||||||| |||||||||||||||    
T  34247215 gtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacgta 34247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 26804038 - 26803960
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||||||||||||||| || |||||||||||| |||||    |||||||||| |||||| |||||||||| ||||    
T  26804038 attttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaaacc 26803960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 390 - 453
Target Start/End: Complemental strand, 35392361 - 35392298
Alignment:
Q  390 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactacc 453  Q
    ||||| || ||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||    
T  35392361 ttttttaaggataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactacc 35392298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 6221790 - 6221690
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||| ||||||||||||||| |||||||||||| |||||||| | | | |||||||| | || | |||| ||||||||    
T  6221790 aagaacaatgttctatttaaattttt-aaaagataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgaggaa 6221692  T
Q  468 cc 469  Q
    ||    
T  6221691 cc 6221690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 429
Target Start/End: Original strand, 17322623 - 17322684
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggta 429  Q
    |||| |||||||||||| ||||||||| |||||||||||||| ||  |||||||||||||||    
T  17322623 aagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 390 - 466
Target Start/End: Original strand, 10925976 - 10926052
Alignment:
Q  390 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    ||||||||| |||||||||| |||||||||||||| | | || ||| || ||||||| |||||| ||||||||||||    
T  10925976 tttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgagga 10926052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 9172940 - 9172989
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagagg 335  Q
    |||||| |||||| |||||| ||||||||||||| |||||||||||||||    
T  9172940 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagg 9172989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 286 - 335
Target Start/End: Original strand, 9180922 - 9180971
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagagg 335  Q
    |||||| |||||| |||||| ||||||||||||| |||||||||||||||    
T  9180922 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagg 9180971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 294 - 485
Target Start/End: Complemental strand, 45475993 - 45475802
Alignment:
Q  294 tccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttt 393  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||        | ||||||||||||||||| ||||||||    
T  45475993 tccctgagaattcggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttt 45475894  T
Q  394 taaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45475893 taaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 45475802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 283 - 485
Target Start/End: Original strand, 23606545 - 23606747
Alignment:
Q  283 aatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttcta 382  Q
    ||||||||| |||||| |||||| ||||||||||||| ||||||||||||||  ||||| |||||||||||||||        | |||||||||||||||    
T  23606545 aatcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatgttcta 23606644  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  23606645 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaacacc 23606744  T
Q  483 aaa 485  Q
    |||    
T  23606745 aaa 23606747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 13534613 - 13534804
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||||| |||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||        | ||||||||||||||||| |||||||    
T  13534613 gtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttt 13534712  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13534713 ttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 13534804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 13624153 - 13624344
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||||| |||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||        | ||||||||||||||||| |||||||    
T  13624153 gtccctgaaaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttt 13624252  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13624253 ttaaaagataaatacaag-tgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 13624344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 10917575 - 10917376
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    ||||||||||| | |||||| ||||||||||||| | ||||||||||||| ||||| |||||||||||||||        | || | ||||| ||||||     
T  10917575 cagggctgtccttaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctattt 10917476  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10917475 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacctaacaccaaa 10917376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 285 - 485
Target Start/End: Original strand, 23798178 - 23798379
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaa-gagcaatgttctat 383  Q
    ||||||| |||||| |||||| ||||||||||||| ||||| |||||||||||| || |||||||||||||||          || ||||||||||||||    
T  23798178 tcagggccgtccctaagaattcggaggctcggctctgggaacgaaaagaggtcaatgataaaatcaaaacgtatattttttttaaagagcaatgttctat 23798277  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||    
T  23798278 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacacca 23798377  T
Q  484 aa 485  Q
    ||    
T  23798378 aa 23798379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 2952137 - 2952339
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn---agaagagcaatgttcta 382  Q
    |||||| ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||           | |||||||||||||||    
T  2952137 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaaagagcaatgttcta 2952236  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || |||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  2952237 tttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacacc 2952336  T
Q  483 aaa 485  Q
    |||    
T  2952337 aaa 2952339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 30883508 - 30883314
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctattgatatt 390  Q
    |||||||||||||  |||||||||||| || |||||||||||| ||||| |||||||||||| ||          | ||||||||||||||||| |||||    
T  30883508 gtccctgagaattcagaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctatttatatt 30883409  T
Q  391 ttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30883408 ttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 30883314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 297 - 485
Target Start/End: Original strand, 5860671 - 5860862
Alignment:
Q  297 ctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag---aagagcaatgttctattgatattttt 393  Q
    ||||||||||||||||||||||| || ||||||||||||||| || |||||||||||| ||             ||||||||||||||||| ||||||||    
T  5860671 ctgagaatttggaggctcggctctggaaatgaaaagaggtcaatgataaaatcaaaacataatatttatttttaaagagcaatgttctatttatattttt 5860770  T
Q  394 taaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  5860771 taaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaaaccccaacctaacaccaaa 5860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 41879364 - 41879166
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| | ||||||||||| |||||||||||||||| |||| |||||| ||||||||        | |||| ||||||||||||     
T  41879364 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggttagtgataaaattaaaacgtatttttttaa-aagaacaatgttctattt 41879266  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  41879265 atattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgagaaacccccacctaacaccaaa 41879166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 37430076 - 37430276
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||||          | |||||| ||||||||||    
T  37430076 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttctatt 37430175  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||||||| ||| |||||||||    
T  37430176 tatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgaggaaccctcacgtaacaccaa 37430275  T
Q  485 a 485  Q
    |    
T  37430276 a 37430276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 42600967 - 42600767
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| |||||| |||||| ||||||||||||| |  |||||||||||||||||| ||||||||||||||          | || ||||||| ||||||    
T  42600967 cagggccgtccctaagaattcggaggctcggctctgaaaatgaaaagaggtcagtgataaaatcaaaacgtttttttttttaaaaaagcaatgatctatt 42600868  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42600867 tatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 42600768  T
Q  485 a 485  Q
    |    
T  42600767 a 42600767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 3048435 - 3048635
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||| ||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||         | ||||||||| | |||||    
T  3048435 cagggccgtctctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatatactatt 3048534  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||| |||||| ||||||||| |||||||||||||    
T  3048535 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgaggaaccctcacctaacaccaa 3048634  T
Q  485 a 485  Q
    |    
T  3048635 a 3048635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 7944523 - 7944624
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| ||||||| |||| | ||||||||||| |||||||||||||||||||||||||  ||||||||| |||||||||| |||||| |||||||||||||    
T  7944523 aagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgaggaa 7944622  T
Q  468 cc 469  Q
    ||    
T  7944623 cc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 8103008 - 8102913
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||| | |||| |||||||||||||||    
T  8103008 aatgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 20003728 - 20003799
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgta 357  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  20003728 cagggccgtccctgagaatttggaggctcggctcggggaatgaaaagaggccagtgataaaatcaaaacgta 20003799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 5973108 - 5973209
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||  |||||||||||| ||||||| | |||| |||||| ||||||    
T  5973108 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtatacacgaggaa 5973207  T
Q  468 cc 469  Q
    ||    
T  5973208 cc 5973209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 5942777 - 5942697
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||||||||||||| || ||||||| ||||||||||||| |||||||||| |||||| |||||||||||||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 11290286 - 11290185
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| ||||||| |||| | |||||||||||||||||||||||||| ||||||||||  |||||| || |||||||||| |||||| |||||||||| ||    
T  11290286 aagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgagcaa 11290187  T
Q  468 cc 469  Q
    ||    
T  11290186 cc 11290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 39332406 - 39332507
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| |  ||||| ||||||||||||||||||| | |||||| |||||||| ||| |||||||||| |||||| |||||||||||||    
T  39332406 aagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaa 39332505  T
Q  468 cc 469  Q
    ||    
T  39332506 cc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 375 - 469
Target Start/End: Complemental strand, 5721654 - 5721560
Alignment:
Q  375 atgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||| |  ||||||||||||||||||||||||||| ||||||  ||||||||||| | |||||||| |||||| ||||| |||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtatacctgaggaacc 5721560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 15167416 - 15167517
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||||||||||||||| || |||  ||||||||||| |||||||| | |||||||| |||| | |||||||||||||    
T  15167416 aagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgaggaa 15167515  T
Q  468 cc 469  Q
    ||    
T  15167516 cc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 15078854 - 15078759
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| | | ||||||||||||||||| ||||||| ||||||||||  |||||||| | |||||||| |||| | |||||||||||||||    
T  15078854 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 15078759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 41677174 - 41677276
Alignment:
Q  368 aagagcaatgttctattgatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    |||| |||||||||||| | ||||| |||||||||||||||||| || |||||||||||| |||| | | |||||||||| |||||  ||||||||||||    
T  41677174 aagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgagga 41677273  T
Q  467 acc 469  Q
    |||    
T  41677274 acc 41677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 375 - 464
Target Start/End: Original strand, 34789870 - 34789959
Alignment:
Q  375 atgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgag 464  Q
    |||||||||| | || | |||||||||||||||||| || ||||||||||  ||||||||| |||||||||| |||||| ||||||||||    
T  34789870 atgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 34789959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 25561502 - 25561595
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| | || ||||||| |||||||||||||||||||||||||||| || ||||| | |||||||| ||| || |||||||||||||||    
T  25561502 aatgttctatttaaatcttttaaa-gataaatacaaggtgccgtatatatgcgata-acccaaatgtgaaaatcactgccgtatacatgaggaacc 25561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 30674404 - 30674482
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaat 446  Q
    |||| |||||||||||| | || |||||||||||||||| |||||| |||||||||||| ||||| || ||||||||||    
T  30674404 aagaacaatgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaat 30674482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 461
Target Start/End: Complemental strand, 8646307 - 8646215
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacat 461  Q
    |||| |||||||||||| | |||||||||||||||||||||||||  |||||||||||  ||||| || | |||||||| |||||| |||||||    
T  8646307 aagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatgc-atacacgcaaatgtgaaaatcactaccgtatacat 8646215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 23941097 - 23941193
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||| |||| | |||||||||||||||||||||||||| | |||||| ||| |||||||| || ||||||| || | |||||| | ||||||||    
T  23941097 caatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcacaatcatatatacgaggaacc 23941193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 14509984 - 14510084
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtg-aaaatgactaccatatacatgagga 466  Q
    |||| |||||||| ||| | ||||||||||||| ||||| |||||| ||||||||  ||||||||||| | ||| ||||| |||||| |||||||||| |    
T  14509984 aagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatata--cggtacacccaaatgtgaaaaatcactaccgtatacatgagta 14510081  T
Q  467 acc 469  Q
    |||    
T  14510082 acc 14510084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 433
Target Start/End: Complemental strand, 5757153 - 5757117
Alignment:
Q  397 aagataaatacaaggtgccgtatatatgcggtacacc 433  Q
    ||||||||||||||||||||||||||||||| |||||    
T  5757153 aagataaatacaaggtgccgtatatatgcggaacacc 5757117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 9108595 - 9108551
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggt 412  Q
    |||| |||||||||||| | |||||||||||||||||||||||||    
T  9108595 aagaacaatgttctatttaaattttttaaaagataaatacaaggt 9108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 413
Target Start/End: Original strand, 34868184 - 34868223
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtg 413  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  34868184 aatgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 34048706 - 34048806
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgc--ggtacacccataggtgaaaatgactaccatatacatgagg 465  Q
    |||| |||||||||||| | |  ||||||||||||||||||| ||| |||||||||    | |||||||| || ||||||| |||||  |||||||||||    
T  34048706 aagaacaatgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgagg 34048805  T
Q  466 a 466  Q
    |    
T  34048806 a 34048806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 1e-70; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 29077404 - 29077205
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||        | |||||||||||||||||     
T  29077404 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 29077305  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29077304 atattttttaaaagataaatacaaggtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 29077205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 8171464 - 8171656
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||| ||||        | ||||||||||||||||| |||||||    
T  8171464 gtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaagcgtattttttttaaaagagcaatgttctatttatatttt 8171563  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  8171564 ttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 8171656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 18776683 - 18776883
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||| || |||||||||||||||||| |||||||||||  ||         | |||||||||||||||||    
T  18776683 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaatataattttttttaaaagagcaatgttctatt 18776782  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||||||    
T  18776783 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgagaaacccccacctaacaccaa 18776882  T
Q  485 a 485  Q
    |    
T  18776883 a 18776883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 12596207 - 12596404
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||||         |  ||||| ||||||||||     
T  12596207 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtttttttttaa--agagcgatgttctattt 12596304  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  12596305 atatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaa 12596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 20091197 - 20091398
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| |||||| |||||| ||||||||||||| | ||||||||||||| ||||| |||||||||||||||          | || | ||||| |||||    
T  20091197 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaaacaatgatctat 20091296  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  20091297 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 20091396  T
Q  484 aa 485  Q
    ||    
T  20091397 aa 20091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 283 - 485
Target Start/End: Original strand, 23550985 - 23551188
Alignment:
Q  283 aatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttcta 382  Q
    ||||||||  |||||| |||||| ||||||||||||| | ||||||||||||| ||||| |||||||||||| ||        | || ||||||| ||||    
T  23550985 aatcagggtcgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacatatttttttaaaaaaagcaatgatcta 23551084  T
Q  383 ttgatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    || ||||||| |||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  23551085 tttatatttttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 23551184  T
Q  482 caaa 485  Q
    ||||    
T  23551185 caaa 23551188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 10329327 - 10329527
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaaga-gcaatgttctatt 384  Q
    |||||| || ||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||        | || | |||||||||||||    
T  10329327 cagggccgttcctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctatt 10329426  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||| ||||||||||||||||| || | ||||| ||||||||||||||||| |||||||||| ||||||||| |||||||||    
T  10329427 tatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccacttaacaccaa 10329526  T
Q  485 a 485  Q
    |    
T  10329527 a 10329527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 10955671 - 10955469
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn---agaagagcaatgttcta 382  Q
    ||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||| | ||||||||   |            | |||||| ||||||||    
T  10955671 cagggctgtccatgagaattcggaggctcagctcggggaatgaatagaggtcagtgattaaatcaaattttttttttttttttaaaagagcgatgttcta 10955572  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || ||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||    
T  10955571 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 10955472  T
Q  483 aaa 485  Q
    |||    
T  10955471 aaa 10955469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 286 - 448
Target Start/End: Complemental strand, 26254178 - 26254015
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| |||||||||||| ||         | |||||||||||||||||    
T  26254178 cagggctgtccctgagaattcggaggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacatatttttttttaaaagagcaatgttctatt 26254079  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatga 448  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  26254078 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 24525606 - 24525802
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag----aagagcaatgttctattgata 388  Q
    |||||| |||||| ||||||||||||| ||||||||||||||| | ||| |||||||||||||||              || | |||||||||||| |||    
T  24525606 gtccctaagaattcggaggctcggctctgggaatgaaaagaggcctgtgataaaatcaaaacgtattttttttttttttaaaaacaatgttctatttata 24525705  T
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  24525706 ttttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 24525802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 48983756 - 48983961
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn------agaagagcaatgtt 379  Q
    |||||| |||||| |||||| ||||||||||||| | ||||||||||||| || || |||||||||||||||              | || | ||||| |    
T  48983756 cagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacgtatttttttttttttaaaaaaaacaatgat 48983855  T
Q  380 ctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaac 479  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||    
T  48983856 ctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacctaac 48983955  T
Q  480 accaaa 485  Q
    ||||||    
T  48983956 accaaa 48983961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 286 - 481
Target Start/End: Original strand, 47984885 - 47985083
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| |||||| |||||| |  |||||||||| ||||||||||||| | ||||| ||||||||||||||           | || |||||||||||||    
T  47984885 cagggccgtccctaagaattcgttggctcggctctgggaatgaaaagatgccagtgataaaatcaaaacgtgttttttttttaaaaaagcaatgttctat 47984984  T
Q  384 tgatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    | ||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||    
T  47984985 ttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgaggaacccccacctaacac 47985083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 368 - 485
Target Start/End: Original strand, 38414876 - 38414993
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||||||| ||||||||  |||||||||||||||||||| |||||| |||||||||| |||||||||| ||||||||||||||||  |||||||||||||    
T  38414876 aagagcaacgttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgaggaa 38414975  T
Q  468 cccccacctaacaccaaa 485  Q
    ||||||||||||||||||    
T  38414976 cccccacctaacaccaaa 38414993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 288 - 485
Target Start/End: Complemental strand, 8239869 - 8239670
Alignment:
Q  288 gggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgat 387  Q
    |||| |||||| |||||||||||||||||||| || |||||||||||| || || |||||| ||||||||        | ||||| ||||||||||| ||    
T  8239869 gggccgtccctaagaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtattttttttaaaagagtaatgttctatttat 8239770  T
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccc--ccacctaacaccaaa 485  Q
    ||||||||||| ||||||| || |||||||||||||| |||||||||| | |||||||||| |||| |||| |||||||||||  |||| ||||||||||    
T  8239769 attttttaaaaaataaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaacaccaaa 8239670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 294 - 485
Target Start/End: Complemental strand, 19692271 - 19692079
Alignment:
Q  294 tccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctattgatatttt 392  Q
    ||||| |||||| ||| ||||||||| || ||||||||| |  ||||| |||||||||||||||         | ||||||||||||||||| |||||||    
T  19692271 tccctaagaattcggaagctcggctctggaaatgaaaagtgtccagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatttatatttt 19692172  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| |||||||| ||||||||||||||||| | ||||||||||||||  | |||||||||||||||| | ||||||||||||    
T  19692171 ttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgaggaaccctcgcctaacaccaaa 19692079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 286 - 465
Target Start/End: Complemental strand, 28749895 - 28749715
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| |||||||| |||| ||||||||||||| ||||||||||||||  || || |||||||||||| ||          | ||||||||| ||||||    
T  28749895 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccaatgataaaatcaaaacatatttttttttcaaaagagcaatattctat 28749796  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagg 465  Q
    | |||||||| |||||||||||||||||||||||||||||||||||||| || | |||||||| |||||| |||||||||||    
T  28749795 ttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgagg 28749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 25010611 - 25010418
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaaga--gcaatgttctat 383  Q
    |||||| |||||| |||||| ||||||||||||| || |||||||||||| ||||| |||||||||||||||        | || |  |||||| |||||    
T  25010611 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaaaagcaatgatctat 25010512  T
Q  384 tgatatttttt--aaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    | |||||||||  |||||||||||| ||||||          |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  25010511 ttatattttttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 25010422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 368 - 447
Target Start/End: Original strand, 33162339 - 33162418
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatg 447  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  33162339 aagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 9021820 - 9021898
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  9021820 attttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgagga 9021898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 7398553 - 7398452
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||| |||||||||||||||||||| |||||||| | |||||| | |||||||||| ||||||||||||||||||||    
T  7398553 aagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgaggaa 7398454  T
Q  468 cc 469  Q
    ||    
T  7398453 cc 7398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 2611262 - 2611363
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| ||  ||||||||| || ||  |||||||||||||    
T  2611262 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgaggaa 2611361  T
Q  468 cc 469  Q
    ||    
T  2611362 cc 2611363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 374 - 466
Target Start/End: Complemental strand, 23859169 - 23859077
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    ||||||||||| | |||||||||||||||||||||| || ||||||||||||| |||||||| || ||||||| |||||| ||||||||||||    
T  23859169 aatgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgagga 23859077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 36891674 - 36891579
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| |||||||||||| ||| ||||||| |||  |||||||| ||||||| ||| |||||||||| |||||| |||||||||||||||    
T  36891674 aatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 458
Target Start/End: Original strand, 6765681 - 6765771
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatata 458  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| |||||||| || ||||| ||| |||||||||| |||||| ||||    
T  6765681 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 12981422 - 12981327
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| |  |||||||||||||||||||||||| || |||||| ||||||||| || |||||||||| |||||  |||| ||||||||||    
T  12981422 aatgttctatttaatttttttaaaagataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgaggaacc 12981327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 368 - 458
Target Start/End: Complemental strand, 23744898 - 23744808
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatata 458  Q
    |||| |||||||||| | | ||||||||||||||||||||||||||||| |||||||||||||||| | || | ||||| |||||| ||||    
T  23744898 aagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 36902924 - 36903022
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    |||| |||||||||||| | ||||||||| ||||||||||||| || ||||||||||  ||||||| | |||||||||| | |||  ||||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgagga 36903022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 27237423 - 27237524
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||  ||||||||| | |  | | | |||||||||| |||| | |||||||||||||    
T  27237423 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgaggaa 27237522  T
Q  468 cc 469  Q
    ||    
T  27237523 cc 27237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 40357304 - 40357368
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgta 357  Q
    |||| |||||||| ||||||||||||| || |||||||| ||||||||| |||||||||||||||    
T  40357304 gtccttgagaattcggaggctcggctctggaaatgaaaaaaggtcagtgataaaatcaaaacgta 40357368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 465
Target Start/End: Complemental strand, 20153297 - 20153206
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagg 465  Q
    |||||| |||| | |||||||||||||||||||||| |||  ||||||||||| || ||||| || ||||||| ||| || |||||||||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgagg 20153206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 21763595 - 21763673
Alignment:
Q  376 tgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactacca 454  Q
    ||||||||| | |||||||||||||||||||||| ||  |||||||||||| |||||| | | |||||||| |||||||    
T  21763595 tgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacca 21763673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 469
Target Start/End: Complemental strand, 18201234 - 18201138
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||| |||||| | ||||||||||| ||||||||||| |||| |||||||| |||||||| |  |||||||||   |||| || ||||||||||||    
T  18201234 caatgatctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgaggaacc 18201138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 23020504 - 23020583
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaac 468  Q
    ||||||||||||||||||| ||||||  ||||||||||   |||| || |||||||||| |||||| ||||||||||||||    
T  23020504 attttttaaaagataaatataaggtgttgtatatatgc-acacactcaaaggtgaaaatcactaccgtatacatgaggaac 23020583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 38971333 - 38971255
Alignment:
Q  390 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaac 468  Q
    |||||||||||||||||||||||| ||||||||||   |||||| | | |||||||| |||||| || ||| |||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgtaaacacgaggaac 38971255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 12419495 - 12419596
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||| || || ||||| || | |||| ||| || ||||||| ||||    ||||||||||||    
T  12419495 aagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcactattgaatacatgaggaa 12419594  T
Q  468 cc 469  Q
    ||    
T  12419595 cc 12419596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 1527 - 1328
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||        | ||||||| |||||||||     
T  1527 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcactgttctattt 1428  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  1427 atattttttaaaagataaatacaagctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 1328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 9e-65; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 284 - 485
Target Start/End: Original strand, 27788606 - 27788806
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctat 383  Q
    |||||||| |||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||        | ||||||||| ||||||    
T  27788606 atcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaa-aagagcaattttctat 27788704  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  27788705 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 27788804  T
Q  484 aa 485  Q
    ||    
T  27788805 aa 27788806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 13727317 - 13727517
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||         | |||||||||||||||||    
T  13727317 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatt 13727416  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  13727417 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 13727516  T
Q  485 a 485  Q
    |    
T  13727517 a 13727517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 21479683 - 21479482
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||| ||||||||||||||||||||||| || |||||||||||| ||||| |||||||||||| ||          | ||||||||||||||||    
T  21479683 cagggccgtctctgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagcaatgttctat 21479584  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  21479583 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 21479484  T
Q  484 aa 485  Q
    ||    
T  21479483 aa 21479482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 21280734 - 21280533
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctat 383  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||         | ||||||||||||||||    
T  21280734 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 21280635  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||||    
T  21280634 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaactcccacctaacacca 21280535  T
Q  484 aa 485  Q
    ||    
T  21280534 aa 21280533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 284 - 480
Target Start/End: Original strand, 20711636 - 20711833
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttcta 382  Q
    |||||||  ||||||||||||| |||||||||| || ||||||||||||||||||||  |||||||||||||||         | |||||||||||||||    
T  20711636 atcagggacgtccctgagaattcggaggctcggttctgggaatgaaaagaggtcagtcataaaatcaaaacgtatttttttttaaaagagcaatgttcta 20711735  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaaca 480  Q
    || ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  20711736 tttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccatctaaca 20711833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 19737619 - 19737810
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||||| ||| |||||||  ||| |||||||||| ||||| ||||||||||| ||         | ||||||||||||||||| |||||||    
T  19737619 gtccctgagaatttgaaggttcggctctagga-tgaaaagaggccagtgataaaatcaaaatgttttttttttaaaagagcaatgttctatttatatttt 19737717  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    || |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19737718 tttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 19737810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 300 - 485
Target Start/End: Complemental strand, 28075960 - 28075771
Alignment:
Q  300 agaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag----aagagcaatgttctattgatatttttta 395  Q
    |||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||||        |     || |||||||||||||| ||||||||||    
T  28075960 agaatttggaggctcggctctgggaatgaaaagaggccagtgaaaaaatcaaaacgtattttttttattttaaaaagcaatgttctatttatatttttta 28075861  T
Q  396 aaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28075860 aaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 28075771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 30832443 - 30832642
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| | ||||||||||| ||||||||||||||| ||||| |||||||||||||||        | ||| || ||||||||||     
T  30832443 cagggccgtccctgagaattcgaaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaagcgcgatgttctattt 30832542  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    | ||||||||||| ||||||||||| ||||||||||||| |||||||||| || |||||||||||||| ||| |||||||||||||||||||||||||||    
T  30832543 acattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaa 30832642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 17354142 - 17353942
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaaga-gcaatgttctatt 384  Q
    |||||| |||||| |||||| ||||||||| |||  |||||||||||||||||||| |||||||||||||||        | || | |||||||||||||    
T  17354142 cagggccgtccctaagaattcggaggctcgactcttggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaaaaagcaatgttctatt 17354043  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||| | ||||||||| ||||||||||||||||||||    
T  17354042 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatgaacccccacctaacaccaa 17353943  T
Q  485 a 485  Q
    |    
T  17353942 a 17353942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 24710914 - 24711117
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag----aagagcaatgttct 381  Q
    |||||| ||||||||||||| |||||||| |||| |||||||||||||||| |||| ||||||||||||||               |||||  |||||||    
T  24710914 cagggccgtccctgagaattcggaggctcagctcagggaatgaaaagaggttagtgataaaatcaaaacgtttttttttttttttaaagagtgatgttct 24711013  T
Q  382 attgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    ||| ||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  24711014 atttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 24711113  T
Q  482 caaa 485  Q
    ||||    
T  24711114 caaa 24711117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 298 - 485
Target Start/End: Complemental strand, 33774294 - 33774105
Alignment:
Q  298 tgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctattgatatttttta 395  Q
    |||||||| ||||||||||||| |  |||||||||||| ||||  |||||||||||| ||          | ||||| ||||||||||| ||||||||||    
T  33774294 tgagaattcggaggctcggctctgaaaatgaaaagaggccagtaataaaatcaaaacataatttttttttaaaagagtaatgttctatttatatttttta 33774195  T
Q  396 aaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||    
T  33774194 aaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 33774105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 286 - 447
Target Start/End: Original strand, 27314097 - 27314259
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||||| |||| ||||||||| ||| ||||||||||||||| ||||| |||||||||||||||        | |||||||||||||||||     
T  27314097 cagggccgtccctgaaaattcggaggctcgactctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 27314196  T
Q  386 atattttttaaaa-gataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatg 447  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||    
T  27314197 atattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 288 - 465
Target Start/End: Original strand, 1155767 - 1155947
Alignment:
Q  288 gggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag---aagagcaatgttctatt 384  Q
    |||| |||||| | ||||||||||||||| ||  |||||||||||||||||||| ||||||||||| |||             |||||||||||||||||    
T  1155767 gggccgtccctaaaaatttggaggctcggttctaggaatgaaaagaggtcagtgataaaatcaaaaagtaatttttttttttaaagagcaatgttctatt 1155866  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagg 465  Q
     |||||||||||||||||||||||||||| | ||||||||||||||| ||| ||||||||||||||||| |||||||||||    
T  1155867 tatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 1155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 368 - 485
Target Start/End: Complemental strand, 34397962 - 34397845
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||| | || ||||||||||    
T  34397962 aagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgaggaa 34397863  T
Q  468 cccccacctaacaccaaa 485  Q
    || |||| ||||||||||    
T  34397862 cctccacttaacaccaaa 34397845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 294 - 485
Target Start/End: Original strand, 235151 - 235343
Alignment:
Q  294 tccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttt 393  Q
    ||||| |||||| ||||| ||||||  | ||||||||||||  ||||| |||||||||||||||          || ||||||| |||||| ||||||||    
T  235151 tccctaagaattcggaggttcggctatgagaatgaaaagagaccagtgataaaatcaaaacgtatttttttttaaaaagcaatgatctatttatattttt 235250  T
Q  394 taaaagataaatacaaggtgccg--tatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||| |||||||||  ||||||| | ||||||||| || |||||||||||||| |||||||||| |||||||||| |||||||||    
T  235251 taaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaa 235343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 2477590 - 2477686
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||| ||| | |||||||||||||||||||||||||| | |||||||||| |||||| | | |||||||| |||||| |||||||||||||||    
T  2477590 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 469
Target Start/End: Complemental strand, 6159538 - 6159442
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||  || ||||| |||| |||||| |||| || |||||||    
T  6159538 caatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtatatataaggaacc 6159442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 469
Target Start/End: Original strand, 21183686 - 21183777
Alignment:
Q  378 ttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||| | |||||||||||||||||||||| ||  |||||||||| |||||||||| || ||||||| |||||| |||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 20611889 - 20611794
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||| | | |||||||||| ||||||||||||||| ||||||||| ||  ||| ||| |||||||||| |||||| |||||||||||||||    
T  20611889 aatgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 390 - 468
Target Start/End: Complemental strand, 4037031 - 4036953
Alignment:
Q  390 tttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaac 468  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||| |||| || || |||||| |||| |||||||||    
T  4037031 tttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgaggaac 4036953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 19987329 - 19987149
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||| |||||| ||||| |||||||   ||||||||||||||||||| |||  ||||||||||        |||| ||||||| |||||| |||||||    
T  19987329 gtccctaagaattcggaggatcggctctcagaatgaaaagaggtcagtgataa--tcaaaacgtatttttttaagaaaagcaatgatctatttatatttt 19987232  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    || ||||||||||| || ||| ||          ||||||||| | |||||||||  |||||||||||| ||||| |||||||||||||||||    
T  19987231 tttaaagataaatataaagtgacg----------gtacacccaaatgtgaaaatggttaccatatacataaggaatccccacctaacaccaaa 19987149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 452
Target Start/End: Complemental strand, 30121867 - 30121783
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactac 452  Q
    |||| ||||||| |||| | ||||||||||| |||||||||||||| | |||||||||| |||| ||| |||||||||| |||||    
T  30121867 aagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 27994819 - 27994775
Alignment:
Q  423 tgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||||||||| || |||||||||| |||||| |||||||||||||    
T  27994819 tgcggtacactcaaaggtgaaaatcactaccgtatacatgaggaa 27994775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 9e-65; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 284 - 485
Target Start/End: Original strand, 38869277 - 38869478
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctat 383  Q
    |||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||  |||||||||||||||        | ||||||||||||||||    
T  38869277 atcagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtattttttttaaaagagcaatgttctat 38869376  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||    
T  38869377 ttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacacca 38869476  T
Q  484 aa 485  Q
    ||    
T  38869477 aa 38869478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 36187795 - 36187994
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||         | |||||| ||||||||||     
T  36187795 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgttttttttttaaaagagcgatgttctattt 36187894  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||||||||    
T  36187895 atattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaacaccaaa 36187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 284 - 485
Target Start/End: Complemental strand, 27079199 - 27078996
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttct 381  Q
    |||||||| ||||||||||||| ||||||||||||| | ||||||||||||| ||||| |||||||||||||||          | ||||||||||||||    
T  27079199 atcagggccgtccctgagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttct 27079100  T
Q  382 attgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||||||||||||||    
T  27079099 atttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgaggaacccccacctaacac 27079000  T
Q  482 caaa 485  Q
    ||||    
T  27078999 caaa 27078996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 294 - 485
Target Start/End: Original strand, 34756289 - 34756481
Alignment:
Q  294 tccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctattgatatttt 392  Q
    |||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||         | ||||||||||||||||| |||||||    
T  34756289 tccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatatttt 34756388  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  34756389 ttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaacaaa 34756481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 284 - 485
Target Start/End: Original strand, 16591988 - 16592189
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctat 383  Q
    |||||||| |||| |||||||||||||||||||||| | ||||||||||||| || || |||||||||||| ||        | ||||||||||||||||    
T  16591988 atcagggccgtccttgagaatttggaggctcggctctgagaatgaaaagaggccaatgataaaatcaaaacatattttttttaaaagagcaatgttctat 16592087  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||| ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||    
T  16592088 ttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaacacca 16592187  T
Q  484 aa 485  Q
    ||    
T  16592188 aa 16592189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 19523377 - 19523184
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaa-gagcaatgttctattgatattt 391  Q
    ||||||||||||| ||||||||||||| ||||||||||||||  ||||| ||||||||||||||           || ||||  ||||||||| ||||||    
T  19523377 gtccctgagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtgttttttttttaaagagcggtgttctatttatattt 19523278  T
Q  392 tttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19523277 tttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 19523184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 30854507 - 30854314
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctattgatattt 391  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||| | |||||| ||||||||         | ||||||||||||||||| ||||||    
T  30854507 gtccctgataatttggaggctcggctctgggaatgaaaaaaggtcagcgataaaattaaaacgtatttttttttaaaagagcaatgttctatttatattt 30854408  T
Q  392 tttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||    
T  30854407 tttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgaggaacccccacctaacaccaaa 30854314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 15480006 - 15480204
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||| ||        | |||| | ||||||||||     
T  15480006 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacatatttttttta-aagaccgatgttctattt 15480104  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  15480105 atattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaa 15480204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 2275068 - 2274875
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctattgatattt 391  Q
    ||||||||||||| |||||||||| || ||||||||||||||| ||||| |||||||||||||||         | |||||| |||||||||| ||||||    
T  2275068 gtccctgagaattcggaggctcggttctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatattt 2274969  T
Q  392 tttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||  ||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  2274968 tttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaacaccaaa 2274875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 294 - 485
Target Start/End: Original strand, 16198717 - 16198909
Alignment:
Q  294 tccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaaga-gcaatgttctattgatatttt 392  Q
    ||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||          || | ||||||||||||| |||||||    
T  16198717 tccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaaagcaatgttctatttatatttt 16198816  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16198817 ttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 16198909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 295 - 485
Target Start/End: Complemental strand, 9364467 - 9364276
Alignment:
Q  295 ccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag-aagagcaatgttctattgatattttt 393  Q
    |||| |||||| |||||||| |||| ||||||||||||||| ||||| |||||||||||||||           || |||||||||||||| ||||||||    
T  9364467 ccctaagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaaagcaatgttctatttatattttt 9364368  T
Q  394 taaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  9364367 taaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacatcaaa 9364276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 287 - 485
Target Start/End: Original strand, 28822253 - 28822457
Alignment:
Q  287 agggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn------agaagagcaatgttc 380  Q
    ||||| |||||| |||||| ||||| ||||||  |||||||||||||||| |||| |||||||||||||||              | |||||||||||||    
T  28822253 agggccgtccctaagaattcggaggttcggctttgggaatgaaaagaggttagtgataaaatcaaaacgtattttttttttttttaaaagagcaatgttc 28822352  T
Q  381 tattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaaca 480  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||    
T  28822353 tatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatgaacccccacctaaca 28822452  T
Q  481 ccaaa 485  Q
    |||||    
T  28822453 ccaaa 28822457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 16799240 - 16799442
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaa-tgttcta 382  Q
    |||||| |||||| |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||||||          | ||||| || |||||||    
T  16799240 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaaaacgtattttttttttaaaagagtaaatgttcta 16799339  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || ||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||    
T  16799340 tttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacataacacc 16799439  T
Q  483 aaa 485  Q
    |||    
T  16799440 aaa 16799442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 286 - 465
Target Start/End: Original strand, 31194528 - 31194706
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||||| |||| ||||||||||||| ||||||||||||||  ||||| |||||||||||||||        | |||||||||||||||||     
T  31194528 cagggccgtccctgaaaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacgtatttcttttaaaagagcaatgttctattt 31194627  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagg 465  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||||| |||||||||||    
T  31194628 atattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgagg 31194706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 284 - 470
Target Start/End: Original strand, 22986471 - 22986658
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttcta 382  Q
    |||||||| |||| |||||||| |||||||| |||| | ||||||||||||| ||||| |||||||||||||||         | |||||||||||||||    
T  22986471 atcagggccgtccgtgagaattcggaggctcagctctgagaatgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttcta 22986570  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccc 470  Q
    || ||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  22986571 ttaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgagaaaccc 22986658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 300 - 485
Target Start/End: Complemental strand, 27924253 - 27924067
Alignment:
Q  300 agaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaaga-gcaatgttctattgatattttttaaaa 398  Q
    |||||| || |||||| ||| | ||||||||||||| ||||| |||||||||||||||        | || | ||||||  ||||| |||||||||||||    
T  27924253 agaattcgggggctcgactctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgacctatttatattttttaaaa 27924154  T
Q  399 gataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||| |||||||||||||||||||||||| ||| |||| |||||||||||| |||||||||||||| ||| ||||||||||||    
T  27924153 gataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaacgcccgcctaacaccaaa 27924067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 40389537 - 40389647
Alignment:
Q  371 agcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccc 470  Q
    |||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||| |||  |||||||||||    
T  40389537 agcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaaccc 40389636  T
Q  471 ccacctaacac 481  Q
    |||||||||||    
T  40389637 ccacctaacac 40389647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 7671118 - 7670909
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn---------agaagagcaat 376  Q
    |||||| |||| | |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||                 | || ||||||    
T  7671118 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaaaaaaagcaat 7671019  T
Q  377 gttctattgatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacc 475  Q
    |||||||| ||||||||| |||||||||||| |||||||||||||| | ||||||||||| ||||||||||||||||| ||||||||||| | |||||||    
T  7671018 gttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgaggtatccccacc 7670919  T
Q  476 taacaccaaa 485  Q
    ||||||||||    
T  7670918 taacaccaaa 7670909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 465
Target Start/End: Original strand, 31881346 - 31881528
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttct 381  Q
    |||||||| |||||||| ||||| |||||||||||| |||||||||||| |||||||  ||||||||||||||           | ||||||||||||||    
T  31881346 atcagggccgtccctgaaaatttagaggctcggctctgggaatgaaaagtggtcagtaataaaatcaaaacgttttttttttttaaaagagcaatgttct 31881445  T
Q  382 attgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagg 465  Q
    ||| ||||||||||||||||||||||| |||||||||||||||||| ||| ||| || ||||||| |||||| |||||||||||    
T  31881446 atttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgagg 31881528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 330 - 472
Target Start/End: Original strand, 23284022 - 23284164
Alignment:
Q  330 aagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggta 429  Q
    |||||| ||||| |||||||||||||||        | ||||||||||||||||| ||||||||||||   ||||||||||||| |||||||||||||||    
T  23284022 aagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggta 23284121  T
Q  430 cacccataggtgaaaatgactaccatatacatgaggaaccccc 472  Q
    |||||| || |||||||||||||| ||||||||||||||||||    
T  23284122 cacccaaagatgaaaatgactaccgtatacatgaggaaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 300 - 448
Target Start/End: Complemental strand, 7338170 - 7338021
Alignment:
Q  300 agaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaa-gagcaatgttctattgatattttttaaaa 398  Q
    ||||||||||||||||||||  |||||||||||||||||  | ||||||||||||||           || ||||||||||||||| |||||||||||||    
T  7338170 agaatttggaggctcggctctaggaatgaaaagaggtcaaggataaaatcaaaacgttttttttttttaaagagcaatgttctatttatattttttaaaa 7338071  T
Q  399 gataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatga 448  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  7338070 gataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 368 - 467
Target Start/End: Original strand, 36868874 - 36868973
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| |  ||||||||||||||||||||||||| |||||||||| |||||||||| | |||||||| |||||| |||||||||||||    
T  36868874 aagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgaggaa 36868973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 368 - 466
Target Start/End: Original strand, 2024640 - 2024738
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    |||| |||||||||||| | ||||||| |||||||||||||| |||||||||||||| | |||||||| || ||||||| |||||||||||||||||||    
T  2024640 aagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgagga 2024738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 14318383 - 14318484
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| |||||||||| | |||| ||| |  ||||||| |||||| |||||||||||||    
T  14318383 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaa 14318482  T
Q  468 cc 469  Q
    ||    
T  14318483 cc 14318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 2530901 - 2530996
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| |  ||||||||||||||||||||| ||| ||||||||| ||||||| ||| |||||||||| |||||  |||||||||||||||    
T  2530901 aatgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 34426005 - 34425904
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| ||||||||||||   ||||||||||||||||||||||||||||||||||||| | |||||| | || | ||||| | |||| |||||||||||||    
T  34426005 aagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgaggaa 34425906  T
Q  468 cc 469  Q
    ||    
T  34425905 cc 34425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 26718953 - 26719045
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    ||||||||||| | | |||||||||||||||||||| ||| |||||||||||| ||||| || |||||||||| ||||||  |||||||||||    
T  26718953 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 374 - 466
Target Start/End: Original strand, 26988697 - 26988789
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    ||||||||||| | | |||||||||||||||||||| ||| |||||||||||| ||||| || |||||||||| ||||||  |||||||||||    
T  26988697 aatgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgagga 26988789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 1366524 - 1366625
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||| |||||||||||||| ||  ||||||||||| |||||| | | |||||||| |||||| |||| ||||||||    
T  1366524 aagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtatatatgaggaa 1366623  T
Q  468 cc 469  Q
    ||    
T  1366624 cc 1366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 2412190 - 2412089
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||||||| |||||||||| ||| |||||||||||| | || ||| | |||||||| |||||  |||||||||||||    
T  2412190 aagaacaatgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgaggaa 2412091  T
Q  468 cc 469  Q
    ||    
T  2412090 cc 2412089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 33037882 - 33037781
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| ||||||| |||| | ||||||||||||||||||||||| |  ||||||||||  ||||||||| |||||||||  | |||| |||||||||||||    
T  33037882 aagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgaggaa 33037783  T
Q  468 cc 469  Q
    ||    
T  33037782 cc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 374 - 468
Target Start/End: Complemental strand, 24395835 - 24395741
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaac 468  Q
    ||||||||||| | ||||||||||||||||||||||||||  |||||||| |  |||| ||| |||||||||| || ||| |||| |||||||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgaggaac 24395741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 461
Target Start/End: Complemental strand, 10543755 - 10543682
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacat 461  Q
    ||||||||||||||||||| ||||||  ||||||||||| |||| ||| |||||||||| |||||| |||||||    
T  10543755 attttttaaaagataaatataaggtgatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 452
Target Start/End: Original strand, 22648734 - 22648818
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactac 452  Q
    |||| |||||||||||| | |||||||||||||||||||||| ||| |||||||||| || ||| ||| |||||| ||| |||||    
T  22648734 aagaacaatgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactac 22648818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 41911636 - 41911716
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||| | || ||||| |||| | |||| ||||||||||    
T  41911636 ttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgaggaacc 41911716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 368 - 467
Target Start/End: Complemental strand, 10407563 - 10407464
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||||||||||||| |||||||| |||| |||||  ||||| | | | |||||||| |||||| ||| |||||||||    
T  10407563 aagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgaggaa 10407464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 11242316 - 11242417
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| |  |||||||||||||||||||||  ||  ||||||||| | |||| ||| || || |||| |||||| |||||||||||||    
T  11242316 aagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgaggaa 11242415  T
Q  468 cc 469  Q
    ||    
T  11242416 cc 11242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 40389461 - 40389518
Alignment:
Q  294 tccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaa 351  Q
    ||||| |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||    
T  40389461 tccctaagaattcggaggctcggctctgggaatgaaaagatgtcagtgataaaatcaa 40389518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 40794325 - 40794426
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| ||||||| |||| | ||||||||||||| |||||||| | |||||| ||||  | |||||| | |||||||||| |||||| |||||||||| ||    
T  40794325 aagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaaa 40794424  T
Q  468 cc 469  Q
    ||    
T  40794425 cc 40794426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 15639724 - 15639644
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||| |||||||||||||||||| |||||||||||| |||| ||| || ||||||| |||  | ||||||| |||||||    
T  15639724 tttttttaaagataaatacaaggtgacgtatatatgcgatacatccaaagatgaaaatcactgtcgtatacataaggaacc 15639644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 413
Target Start/End: Complemental strand, 606256 - 606211
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtg 413  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||    
T  606256 aagaacaatgttctatttaaattttttaaaagataaatacaaggtg 606211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 23283943 - 23284014
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgta 357  Q
    |||||| |||||||||||||  ||||||| | |   |||||||||||||| ||||| |||||||||||||||    
T  23283943 cagggccgtccctgagaattcagaggctcagttttaggaatgaaaagaggccagtgataaaatcaaaacgta 23284014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 453
Target Start/End: Complemental strand, 17345053 - 17344973
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactacc 453  Q
    |||||||||||| | |||||||| |  ||||||||||| || | | ||||||||||||||||| || | ||||| ||||||    
T  17345053 caatgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactacc 17344973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 300 - 482
Target Start/End: Original strand, 43455463 - 43455645
Alignment:
Q  300 agaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaaaag 399  Q
    |||||| ||||||||| ||| ||||||||||||||||||||| |||||||||||||||        | ||||||||||||||||| ||||||||||||||    
T  43455463 agaattcggaggctcgactctgggaatgaaaagaggtcagtgataaaatcaaaacgtattatttttaaaagagcaatgttctatttatattttttaaaag 43455562  T
Q  400 ataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  43455563 ataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 43455645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 286 - 481
Target Start/End: Complemental strand, 54780968 - 54780771
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||| ||||||| ||||| ||||||||||||||| ||||| |||||||||||||||          | ||||||||||||||||    
T  54780968 cagggccgtccctgagaattcggaggcttggctctgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagagcaatgttctat 54780869  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  54780868 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 54780771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 280 - 485
Target Start/End: Complemental strand, 47129182 - 47128977
Alignment:
Q  280 tccaatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgtt 379  Q
    |||| |||| || ||||||||||||| ||||||||||||| || |||||||||||| ||||| ||||||||||| |||        | |||| |||||||    
T  47129182 tccagtcagagccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtattttttttaaaagaacaatgtt 47129083  T
Q  380 ctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaac 479  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||    
T  47129082 ctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaac 47128983  T
Q  480 accaaa 485  Q
    ||||||    
T  47128982 accaaa 47128977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 278 - 485
Target Start/End: Complemental strand, 32128782 - 32128574
Alignment:
Q  278 cctccaatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaat 376  Q
    ||||||| |||||| |||||| |||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||         | |||||||||    
T  32128782 cctccaagcagggccgtccctaagaatttggaggctcggctctgggaatgaaaaaaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaat 32128683  T
Q  377 gttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacct 476  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||| || |||||||||||    
T  32128682 gttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataagaaacccccacct 32128583  T
Q  477 aacaccaaa 485  Q
    |||||||||    
T  32128582 aacaccaaa 32128574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 34027768 - 34027569
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||        | || ||||||||||||||     
T  34027768 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctattt 34027669  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||    
T  34027668 atattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacctaacaccaaa 34027569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 34768499 - 34768691
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||||||||||  |||||||||||||||  |||| |||||||||||| ||        | ||||||||||||||||| |||||||    
T  34768499 gtccctgagaattcggaggctcggctttgggaatgaaaagaggctagtgataaaatcaaaacatattttttttaaaagagcaatgttctatttatatttt 34768598  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  34768599 ttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaa 34768691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 285 - 485
Target Start/End: Original strand, 37777139 - 37777340
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaaga-gcaatgttctat 383  Q
    |||||||||||||| | |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||        | || | | ||||||||||    
T  37777139 tcagggctgtccctaaaaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttaaaaaaaaagtaatgttctat 37777238  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||||    
T  37777239 ttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaactaacacca 37777338  T
Q  484 aa 485  Q
    ||    
T  37777339 aa 37777340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 1105714 - 1105522
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||| ||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||        | |||||  |||||||||| |||||||    
T  1105714 gtccttgagaattcagaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatatttt 1105615  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1105614 ttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaacaccaaa 1105522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 32915575 - 32915375
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacg-tannnnnnnnagaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||| ||||| ||||||||||||| |         | |||||| ||||||||||    
T  32915575 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacggttttttttttaaaagagcgatgttctatt 32915476  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| |||| ||||||||||||||||||||||||||||||    
T  32915475 tatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgaggaacccccacctaacaccaa 32915376  T
Q  485 a 485  Q
    |    
T  32915375 a 32915375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 298 - 485
Target Start/End: Original strand, 38209520 - 38209708
Alignment:
Q  298 tgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaa-gagcaatgttctattgatattttttaa 396  Q
    |||||||||||||||||||||| || |||||||||||| ||||| |||||||||||  ||          || ||||||||||||||| |||||||||||    
T  38209520 tgagaatttggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaagagcaatgttctatttatattttttaa 38209619  T
Q  397 aagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38209620 aagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 38209708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 5128758 - 5128959
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatc-aaaacgtannnnnnnn-agaagagcaatgttctat 383  Q
    |||||| |||||||||||||| |||||||||||| ||||||||||||||| ||||| ||||||| |||||||          |||||||| || ||||||    
T  5128758 cagggccgtccctgagaatttagaggctcggctctgggaatgaaaagaggccagtgataaaatctaaaacgtttttttttttagaagagcgatattctat 5128857  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||||||| |||||||||||||    
T  5128858 ttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaacctccacctaacacca 5128957  T
Q  484 aa 485  Q
    ||    
T  5128958 aa 5128959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 10979092 - 10978890
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn---agaagagcaatgttcta 382  Q
    |||||| ||| ||||||||| ||||| |  |||| |||||||||||||||| |||| |||||||||||||||           | |||||||||||||||    
T  10979092 cagggccgtctctgagaattcggaggtttagctctgggaatgaaaagaggttagtgataaaatcaaaacgtatttttttttttaaaagagcaatgttcta 10978993  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  10978992 tttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacacc 10978893  T
Q  483 aaa 485  Q
    |||    
T  10978892 aaa 10978890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 37514848 - 37514649
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag--aagagcaatgttctat 383  Q
    |||||| |||||||||||||||||||||| ||  |||||||||||||||| ||||| |||||||||||||||            |||||| |||||||||    
T  37514848 cagggccgtccctgagaatttggaggctcagc--ggggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttttaaagagcgatgttctat 37514751  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||| |||||||||||||||    
T  37514750 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaagaatccccacctaacacca 37514651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 54083160 - 54083359
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||| | |||| ||||||||||||| | ||||||||||||||||||| |||||||||||||||        | || | ||||| ||||||     
T  54083160 cagggccgtccctaaaaattcggaggctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctattt 54083259  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| || | |||||||||||| ||||||||||||||||| |||||||||||||    
T  54083260 atattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgaggaacccctacctaacaccaaa 54083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 286 - 478
Target Start/End: Original strand, 2790659 - 2790851
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||| || |||||| ||||||||||||| ||||||||||||||  ||||| |||||||||||| |         | |||| ||||||||||||     
T  2790659 cagggccgtctctaagaattcggaggctcggctctgggaatgaaaagagaccagtgataaaatcaaaacattttttttttaaaagaacaatgttctattt 2790758  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaa 478  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  2790759 atattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaa 2790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 19498692 - 19498494
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctatt 384  Q
    ||||||| ||| || |||||| |||||||||||||  |||||||||| ||| || || |||||||||||||||        | |||||||||||||||||    
T  19498692 tcagggccgtcactaagaattcggaggctcggctctaggaatgaaaacaggccaatgataaaatcaaaacgtattttgtttaaaagagcaatgttctatt 19498593  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||| ||||||||||||||  |||||||| ||| ||||||||||||||||  ||||||||||||||||||||||||||||||    
T  19498592 tatattttttaaaagataaatataaggtgccgtatat--gcggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaa 19498495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 48209436 - 48209230
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaa-----atcaaaacgtannnnnnnn--agaagagcaatgt 378  Q
    |||||| ||||||||||||| ||||||||||||| |||| |||||||||  ||||| ||||     |||||||||||          | |||||||||||    
T  48209436 cagggccgtccctgagaattcggaggctcggctctgggagtgaaaagagaccagtgataaattaaaatcaaaacgtattttttttttaaaagagcaatgt 48209337  T
Q  379 tctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaa 478  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||||||| |||||||||||||    
T  48209336 tctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgagaaacccccacctaa 48209237  T
Q  479 caccaaa 485  Q
    |||||||    
T  48209236 caccaaa 48209230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 10428116 - 10428322
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||||  ||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||  ||        | || ||||||||||||||     
T  10428116 cagggccgtcctcgagaattcggaggctcggctctgggaatgaaaagaggtcagtgctaaaatcaaaatttattttttttaaaa-agcaatgttctattt 10428214  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccatag--------gtgaaaatgactaccatatacatgaggaacccccaccta 477  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||        ||||||||||||||| ||||||||||||||| |||||||    
T  10428215 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgaggaacctccaccta 10428314  T
Q  478 acaccaaa 485  Q
    ||||||||    
T  10428315 acaccaaa 10428322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 284 - 485
Target Start/End: Original strand, 35779243 - 35779442
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctat 383  Q
    |||| ||| |||| |||||||| ||||| ||| |||| ||||||||||||||  |||| |||||||||||||||        | ||||||||||||||||    
T  35779243 atcaaggccgtccttgagaattcggaggttcgactcgaggaatgaaaagaggctagtgataaaatcaaaacgtatttttttta-aagagcaatgttctat 35779341  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||  ||||||||| ||    
T  35779342 t-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaaccttcacctaacatca 35779440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 16845210 - 16845011
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||| |||||| ||||||||||||| || |||||||| ||  ||||| |||||||||||||||        | |||||||||||||||||     
T  16845210 cagggccgtccctaagaattcggaggctcggctctggaaatgaaaaaagc-cagtgataaaatcaaaacgtattttttttaaaagagcaatgttctattt 16845112  T
Q  386 atatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
    ||||||||| |||||||||||| |||||| ||||||||||  |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||    
T  16845111 atatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 16845012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 40089707 - 40089506
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattt- 391  Q
    |||||| |||||| |||||||||||||  |||||||||||| ||||||| |||||||||||||||        | || ||||||||| |||| ||||||     
T  40089707 gtccctaagaattcggaggctcggctcttggaatgaaaagaagtcagtgataaaatcaaaacgtattttttttaaaaaagcaatgttttatttatattta 40089608  T
Q  392 --------tttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
            ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  40089607 tttatatttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 40089508  T
Q  484 aa 485  Q
    ||    
T  40089507 aa 40089506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 16882313 - 16882512
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||| |||||| |||||||||||||  |||||||||||| ||||||| |||||||||||||||        | || | ||||||||||||     
T  16882313 cagggccgtccctaagaattcggaggctcggctctaggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgttctattt 16882412  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||| ||||||||||||||||| |||||||||| ||||| ||||||||| | ||||||||||||||||| |||  ||| ||||||| ||||||||||||||    
T  16882413 atactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcacctaacaccaaa 16882512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 286 - 443
Target Start/End: Complemental strand, 17679589 - 17679432
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| ||| ||||||||| |||||||||| || ||||||||||||||  ||||| |||||||||||||||        | ||||||||| |||||||     
T  17679589 cagggccgtctctgagaattcggaggctcggttctgggaatgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatattctattt 17679490  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaa 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17679489 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 297 - 485
Target Start/End: Complemental strand, 35465284 - 35465097
Alignment:
Q  297 ctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaa 396  Q
    ||||||||| |||||||||  || ||||||||||||||||||||| |||||||||||| ||        | |||| ||||||| |||| ||||||||||     
T  35465284 ctgagaattcggaggctcgattctgggaatgaaaagaggtcagtgataaaatcaaaacatattttttttaaaagaacaatgttatatttatattttttac 35465185  T
Q  397 aagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||| ||||||| |||||||||||||||||| | | |||||||| |||||| ||||||||||||| |||||||||||||||||    
T  35465184 aagataaataaaaggtgc-gtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaacaccaaa 35465097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 376 - 485
Target Start/End: Complemental strand, 13460306 - 13460197
Alignment:
Q  376 tgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacc 475  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| | ||||||||||||||| ||||||| |||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T
Q  476 taacaccaaa 485  Q
    ||||||||||    
T  13460206 taacaccaaa 13460197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 38352190 - 38352372
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||| |||||| ||||||||||||| |||||||||||||| |||||| |||||||||||||||          || || |||| |||||| |||||||    
T  38352190 gtccctaagaattcggaggctcggctctgggaatgaaaagagatcagtgataaaatcaaaacgtatttttttttaaaaagtaatgatctatttatatttt 38352289  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| ||||||          |||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||    
T  38352290 ttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaacaccaaa 38352372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 55255447 - 55255259
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||| |  |||||||||||| ||||| |||||||||||| ||         | ||||||||||||| |||    
T  55255447 cagggccgtccctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttccatt 55255348  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||             |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  55255347 tatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 55255260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 387 - 469
Target Start/End: Original strand, 4167910 - 4167992
Alignment:
Q  387 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||| |||||||||||||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 302 - 447
Target Start/End: Complemental strand, 51964884 - 51964736
Alignment:
Q  302 aatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttttt---aaaa 398  Q
    |||| |||| |||||||| ||||||||||||||| |  || |||||||||||||||        | ||||||||||||||||| |||||||||   ||||    
T  51964884 aattcggagactcggctctgggaatgaaaagaggccgatgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttttaaaaa 51964785  T
Q  399 gataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatg 447  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  51964784 gataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 448
Target Start/End: Original strand, 16922245 - 16922409
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||||||||||||| ||  ||||||||||||||  ||||| ||||||||||||||           | ||||||||||||||||    
T  16922245 cagggccgtccctgagaatttggaggctcgactttgggaatgaaaagagaccagtgataaaatcaaaacgttttttatttttaaaagagcaatgttctat 16922344  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatga 448  Q
    | ||||||||||||||||||||| || ||| ||||||||||| |||  |||| ||||||||||||    
T  16922345 ttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaatga 16922409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 51691915 - 51692018
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacc--cataggtgaaaatgactaccatatacatgagg 465  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||   | | |||||||| ||||||||||||| || |    
T  51691915 aagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatatacacgatg 51692014  T
Q  466 aacc 469  Q
    ||||    
T  51692015 aacc 51692018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 371 - 485
Target Start/End: Complemental strand, 24969531 - 24969427
Alignment:
Q  371 agcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccc 470  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||          |||||||||||| ||||||||||||||||| ||||||||||||||||    
T  24969531 agcaatgatctatttatattttttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccc 24969442  T
Q  471 ccacctaacaccaaa 485  Q
    |||||||||||||||    
T  24969441 ccacctaacaccaaa 24969427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 52468393 - 52468292
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||   |||| ||| |||||||||| |||||| ||| |||||||||    
T  52468393 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgaggaa 52468294  T
Q  468 cc 469  Q
    ||    
T  52468293 cc 52468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 373 - 463
Target Start/End: Complemental strand, 36178774 - 36178684
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatga 463  Q
    |||||||||||| | ||| |||||||||||||||||||||| |||||||||||| |||||||| | |||||||| |||||| |||||||||    
T  36178774 caatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 416 - 485
Target Start/End: Original strand, 23509846 - 23509915
Alignment:
Q  416 gtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||| | ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaa 23509915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 469
Target Start/End: Complemental strand, 27112132 - 27112036
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||| ||| | |||||||||||||||||||||||||| | |||||||||| |||||| | | |||||||| |||||| |||||||||||||||    
T  27112132 caatgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 36118463 - 36118559
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||| | |||||||||||||||||||||||||| |||||||||| | |||||||| |  ||||||| |||||| |||||||||| ||||    
T  36118463 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgagtaacc 36118559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 368 - 446
Target Start/End: Original strand, 39655254 - 39655332
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaat 446  Q
    |||| |||||||||||| | |||||||||||||||||||||| || ||| |||||||||||||||||| ||||||||||    
T  39655254 aagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 368 - 431
Target Start/End: Original strand, 9578664 - 9578728
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggt-gccgtatatatgcggtaca 431  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  9578664 aagagcaatgttctatttatattttttaaaagataaatacaaggtagccatatatatgcggtaca 9578728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 10042000 - 10042101
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||| |||| |||||||||||||||||||| |||| | |||||| | | |||||||| |||||| |||||| ||||||    
T  10042000 aagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtatacaggaggaa 10042099  T
Q  468 cc 469  Q
    ||    
T  10042100 cc 10042101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 24397021 - 24396940
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||||||||||| ||||||| ||||||||| | ||||| || |||||||||| |||| | |||||||||||||||    
T  24397021 attttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 388 - 461
Target Start/End: Original strand, 36362891 - 36362964
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacat 461  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||| | ||| |||| ||||||||||||||    
T  36362891 attttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 2135326 - 2135422
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||| ||||||| | |||||||||||||||||||||||||| |||||||||||| |||| ||| |||| || || |||| | |||| ||||||||||    
T  2135326 caatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgaggaacc 2135422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 421
Target Start/End: Original strand, 23508424 - 23508564
Alignment:
Q  283 aatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaa-gagcaatgttct 381  Q
    ||||||| | |||| ||| |||| ||||||||||||  ||||||||||||||| ||||| ||||||||||| |||          || ||||||||||||    
T  23508424 aatcaggaccgtccatgaaaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaatgtattttttttttaatgagcaatgttct 23508523  T
Q  382 attgata-ttttttaaaagataaatacaaggtgccgtatat 421  Q
    ||| ||| ||||||||||||||||||||||||| |||||||    
T  23508524 atttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 389 - 469
Target Start/End: Original strand, 37744931 - 37745011
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||||||||| |||||| || ||||||||| |||| ||| |||||||||| |||||| ||||| |||||||||    
T  37744931 ttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgaggaacc 37745011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 40217319 - 40217238
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||||||||||| |||||| |||||||||||| |||| ||| || ||||||| | || |||||||||||| ||||    
T  40217319 attttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgagtaacc 40217238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 368 - 468
Target Start/End: Original strand, 39329392 - 39329492
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| ||||||||| || | ||||||||||||||||||||||||||  ||||||||| | |||||||| || |||||||   |||| |||||| ||||||    
T  39329392 aagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtatacaggaggaa 39329491  T
Q  468 c 468  Q
    |    
T  39329492 c 39329492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 285 - 356
Target Start/End: Complemental strand, 24969787 - 24969716
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgt 356  Q
    ||||||| |||||| |||||| ||||||||| ||| |||||||||||||||  |||| ||||| ||||||||    
T  24969787 tcagggccgtccctaagaattcggaggctcgactctgggaatgaaaagaggctagtgataaaaacaaaacgt 24969716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 469
Target Start/End: Original strand, 29425194 - 29425275
Alignment:
Q  388 attttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| ||||||| |||||||||||||||||| |||||   | ||||||||||  |||||||| ||| ||| ||||    
T  29425194 attttttaaaaaataaatataaggtgccgtatatatgcagtacatttaaaggtgaaaattgctaccatacacacgagtaacc 29425275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 341
Target Start/End: Complemental strand, 13460361 - 13460305
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtg 341  Q
    ||||||| |||| |||||||| ||||||||| ||| |||||| ||||||||||||||    
T  13460361 tcagggccgtccttgagaattcggaggctcgactctgggaataaaaagaggtcagtg 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 469
Target Start/End: Complemental strand, 45656277 - 45656181
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||| |||| | |||||||||||||||||| ||||||| | |||||||||| || | ||| | |||||||| || | | ||||||||| |||||    
T  45656277 caatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatgacgaacc 45656181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 410
Target Start/End: Complemental strand, 24614060 - 24614018
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaag 410  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  24614060 aagaacaatgttctatttaaattttttaaaagataaatacaag 24614018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 408
Target Start/End: Original strand, 30507122 - 30507162
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaataca 408  Q
    |||| |||||||||||| | |||||||||||||||||||||    
T  30507122 aagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 5e-63; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 283 - 485
Target Start/End: Original strand, 29939778 - 29939980
Alignment:
Q  283 aatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttcta 382  Q
    ||||||| | ||||||||||||| | ||||||||||| |||||| |||||||||||||| |||||||||||||||        | |||||||||||||||    
T  29939778 aatcaggaccgtccctgagaattcgaaggctcggctctgggaataaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttcta 29939877  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||    
T  29939878 tttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaacacc 29939977  T
Q  483 aaa 485  Q
    |||    
T  29939978 aaa 29939980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 4506079 - 4505878
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctat 383  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||         | ||||||||||||||||    
T  4506079 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 4505980  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||    
T  4505979 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacacca 4505880  T
Q  484 aa 485  Q
    ||    
T  4505879 aa 4505878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 6965182 - 6964991
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||   |        | ||||||||||||||||| |||||||    
T  6965182 gtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaata-attttttttaaaagagcaatgttctatttatatttt 6965084  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6965083 ttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 6964991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 3155401 - 3155201
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||     |||||||||||||||||| |||||| ||||| ||         | |||||||||||||||||    
T  3155401 cagggccgtccctgagaattcggaggctcggctttaaaaatgaaaagaggtcagtgataaaattaaaacataattttttttaaaagagcaatgttctatt 3155302  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3155301 tatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 3155202  T
Q  485 a 485  Q
    |    
T  3155201 a 3155201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 3953181 - 3952990
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||| ||||||||||| |||        | |||| | |||||||||| |||||||    
T  3953181 gtccctgagaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtatttttttta-aagaccgatgttctatttatatttt 3953083  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||| ||| |||||||||||||||||||||||||||    
T  3953082 ttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgaggaacccccacctaacaccaaa 3952990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 293 - 485
Target Start/End: Original strand, 10762492 - 10762683
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||| ||||||||||||||| |||| ||||||||||||||| ||||| |||||| |||||||         | ||||||||||||||||| |||||||    
T  10762492 gtccctaagaatttggaggctcagctctgggaatgaaaagaggccagtgataaaattaaaacgtttttttttta-aagagcaatgttctatttatatttt 10762590  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10762591 ttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 10762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 284 - 485
Target Start/End: Original strand, 27506657 - 27506858
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctat 383  Q
    |||||||| |||||| |||||| ||||||||||||| | ||||||||||||| ||||| |||||||||||||||        | || ||||||| |||||    
T  27506657 atcagggccgtccctaagaattcggaggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaagcaatgatctat 27506756  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | ||||||||||||||||||||| ||||||||||||||||| |||||||||| |||| |||||||||||  |||||||||||||| ||||||||||||||    
T  27506757 ttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacctaacacca 27506856  T
Q  484 aa 485  Q
    ||    
T  27506857 aa 27506858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 12337365 - 12337566
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||| | ||||||||||| || |||||||||||| ||||| |||||||||||  ||          | ||||||||||||||||    
T  12337365 cagggccgtccctgagaattcgaaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaatataatttttttttaaaagagcaatgttctat 12337464  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  12337465 ttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 12337564  T
Q  484 aa 485  Q
    ||    
T  12337565 aa 12337566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 286 - 481
Target Start/End: Complemental strand, 26716313 - 26716116
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| |||||| |||||| |  |||||||||  ||||||||||||||||||||| |||||||||||||||         | |||||||||||||||||    
T  26716313 cagggccgtccctaagaattcgttggctcggctttgggaatgaaaagaggtcagtgataaaatcaaaacgtatttttttttaaaagagcaatgttctatt 26716214  T
Q  385 gatatttttt-aaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
     ||||||||| |||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  26716213 tatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 26716116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 7162968 - 7162768
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctatt 384  Q
    ||||||| |||||||||| || | |||||| |||||||||||||||||||| ||||| |||||| |||| ||         | |||||| ||||||||||    
T  7162968 tcagggccgtccctgagatttcgaaggctcagctcggggaatgaaaagaggccagtgataaaattaaaatgtcttttttttaaaagagcgatgttctatt 7162869  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  7162868 tatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgaggaacccctacctaacaccaa 7162769  T
Q  485 a 485  Q
    |    
T  7162768 a 7162768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 8906996 - 8907197
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| || |||||||||| ||||||||||||| |  |||||||||||| ||||| |||||||||||| ||          | ||||| ||||||||||    
T  8906996 cagggccgttcctgagaattcggaggctcggctctgaaaatgaaaagaggccagtgataaaatcaaaacataatttttttttaaaagagtaatgttctat 8907095  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||    
T  8907096 ttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaaacccccacctaacacca 8907195  T
Q  484 aa 485  Q
    ||    
T  8907196 aa 8907197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 310 - 481
Target Start/End: Complemental strand, 9046189 - 9046017
Alignment:
Q  310 ggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttttt-aaaagataaataca 408  Q
    ||||| |||| |||||| |||||||| ||||| |||||||||||||||        | |||| |||||||||||| ||||||||| |||||||||||| |    
T  9046189 ggctcagctctgggaattaaaagaggccagtgataaaatcaaaacgtattgtttttaaaagaacaatgttctatttatatttttttaaaagataaatata 9046090  T
Q  409 aggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  9046089 aggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacac 9046017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 283 - 485
Target Start/End: Complemental strand, 24410626 - 24410420
Alignment:
Q  283 aatcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnag---aagagcaatgtt 379  Q
    ||||||||| |||||| |||||| |||||||||| |  ||||||||||||||| ||||| |||||||||||||||             || | |||||||    
T  24410626 aatcagggccgtccctaagaattcggaggctcggttttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttttaaaaaacaatgtt 24410527  T
Q  380 ctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaac-ccccacctaa 478  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||    
T  24410526 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccccccacctaa 24410427  T
Q  479 caccaaa 485  Q
    |||||||    
T  24410426 caccaaa 24410420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 293 - 443
Target Start/End: Complemental strand, 40636314 - 40636164
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| ||||| |||||||||||| ||        | ||||||||||||||||| |||||||    
T  40636314 gtccctgagaattcggaggctcagctctgggaatgaaaagaggccagtgataaaatcaaaacatattttttttaaaagagcaatgttctatttatatttt 40636215  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaa 443  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  40636214 ttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 293 - 453
Target Start/End: Complemental strand, 34694151 - 34693991
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||| |||| || || |||||||||||| | ||| |||||||||||||||        | ||||||||||||||||| |||||||    
T  34694151 gtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttt 34694052  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactacc 453  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  34694051 ttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 293 - 453
Target Start/End: Complemental strand, 34716563 - 34716403
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||| |||| || || |||||||||||| | ||| |||||||||||||||        | ||||||||||||||||| |||||||    
T  34716563 gtccctgagaattcggaggttcggatctggaaatgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatatttt 34716464  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactacc 453  Q
    |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  34716463 ttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 293 - 443
Target Start/End: Original strand, 5952643 - 5952791
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    ||||||||||||| ||||| |||||||  |||||||||||||| || || |||||||||||||||        | |||||||||||| ||||  ||||||    
T  5952643 gtccctgagaattcggaggttcggctctcggaatgaaaagaggccaatgataaaatcaaaacgtattttttttaaaagagcaatgttatatt--tatttt 5952740  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaa 443  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5952741 ttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 16097109 - 16097008
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| |||||| |||||||||||||    
T  16097109 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgaggaa 16097010  T
Q  468 cc 469  Q
    ||    
T  16097009 cc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 368 - 467
Target Start/End: Original strand, 24035546 - 24035645
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||| | |||||||||| ||||||  ||||||||||||    
T  24035546 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgaggaa 24035645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 13800545 - 13800647
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacaccc-ataggtgaaaatgactaccatatacatgagga 466  Q
    |||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||| | |||||||||| ||||| ||||||| |||||    
T  13800545 aagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaaggtgaaaatcactactatatacacgagga 13800644  T
Q  467 acc 469  Q
    |||    
T  13800645 acc 13800647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 28425711 - 28425812
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |  ||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||| ||||||||||| ||||||||    
T  28425711 aagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacccaaatgtgaaaatcactaccatatatatgaggaa 28425810  T
Q  468 cc 469  Q
    ||    
T  28425811 cc 28425812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 38400899 - 38400798
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| | |||||||||| ||||  || |||||||||| |||||| |||||||||||||    
T  38400899 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaa 38400800  T
Q  468 cc 469  Q
    ||    
T  38400799 cc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 16227369 - 16227470
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||| ||||||| | |||||||||||||||||||||||||| |||||||||| | |||||| |||| ||||||| ||||| |||||||| |||||    
T  16227369 aagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacataaggaa 16227468  T
Q  468 cc 469  Q
    ||    
T  16227469 cc 16227470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 469
Target Start/End: Original strand, 12134065 - 12134142
Alignment:
Q  392 tttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||||||||||||| ||||||||||||| |||||||| | |||||||| |||||| ||||||| |||||||    
T  12134065 tttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacattaggaacc 12134142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 21665701 - 21665802
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||||||||||||||||||| |||| |||||||||| | |||| | | | |||||||| |||||| |||||||||||||    
T  21665701 aagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgaggaa 21665800  T
Q  468 cc 469  Q
    ||    
T  21665801 cc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 463
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  395 aaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatga 463  Q
    ||||||||||||| | ||| ||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 7742134 - 7742236
Alignment:
Q  368 aagagcaatgttctattgatatttt-ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagga 466  Q
    |||| |||||||||||| ||||||| ||||||||||||||||| ||| | |||||||||| |||| ||| |||||||||  |||| | ||| ||||||||    
T  7742134 aagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgagga 7742233  T
Q  467 acc 469  Q
    |||    
T  7742234 acc 7742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 400 - 469
Target Start/End: Complemental strand, 37182739 - 37182670
Alignment:
Q  400 ataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||||| |||||||||||  |||||||| | |||||||| |||||| |||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgaggaacc 37182670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 293 - 413
Target Start/End: Complemental strand, 8327794 - 8327674
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||| | |||| |||||||| | || || ||||||||||| |||||| |||||||||||||||        | || ||||||| |||||| |||||||    
T  8327794 gtccctaaaaattcggaggctcagttctggaaatgaaaagagatcagtgataaaatcaaaacgtattttttttaaaaaagcaatgatctatttatatttt 8327695  T
Q  393 ttaaaagataaatacaaggtg 413  Q
    |||||||||||||| ||||||    
T  8327694 ttaaaagataaatataaggtg 8327674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 11912758 - 11912859
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | ||||   |||| |||||||||| |||||||||||||||  |||| ||| || ||||||| |||||| ||||||| |||||    
T  11912758 aagaacaatgttctatttaaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacataaggaa 11912857  T
Q  468 cc 469  Q
    ||    
T  11912858 cc 11912859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 368 - 446
Target Start/End: Complemental strand, 42029246 - 42029168
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaat 446  Q
    |||| |||||||||||| | ||||||||||||||||||| |||||| | |||| |||  ||||||| | ||||||||||    
T  42029246 aagaacaatgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 398
Target Start/End: Original strand, 1396629 - 1396730
Alignment:
Q  298 tgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgt-annnnnnnnagaagagcaatgttctattgatattttttaa 396  Q
    |||||||| ||||||||| ||| || |||||||||||| ||||| |||||||||||| | |        | ||||||||||||||||| |||||||||||    
T  1396629 tgagaattcggaggctcgactctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctatttatattttttaa 1396728  T
Q  397 aa 398  Q
    ||    
T  1396729 aa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 121; Significance: 9e-62; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 106723 - 106523
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||         | |||| ||||||||||||    
T  106723 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctatt 106624  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  106623 tatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 106524  T
Q  485 a 485  Q
    |    
T  106523 a 106523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 9e-62; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 47467872 - 47467672
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaa-gagcaatgttctatt 384  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||||||           || |||| ||||||||||    
T  47467872 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtgttttttttttaaagagcgatgttctatt 47467773  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47467772 tatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaa 47467673  T
Q  485 a 485  Q
    |    
T  47467672 a 47467672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 286 - 485
Target Start/End: Complemental strand, 21582960 - 21582759
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||| ||||||||||||  ||||||||||||||| ||||| |||||||||||||||          | |||| ||||||| |||    
T  21582960 cagggccgtccctgagaattcggaggctcggctttgggaatgaaaagaggccagtgataaaatcaaaacgtattttttttttaaaagaacaatgttttat 21582861  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  21582860 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 21582761  T
Q  484 aa 485  Q
    ||    
T  21582760 aa 21582759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 285 - 485
Target Start/End: Original strand, 54619120 - 54619321
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctat 383  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||| | || || |||||||||||| ||         | ||||||||||||||||    
T  54619120 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaagccaatgataaaatcaaaacataattttttttaaaagagcaatgttctat 54619219  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  54619220 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 54619319  T
Q  484 aa 485  Q
    ||    
T  54619320 aa 54619321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 285 - 485
Target Start/End: Original strand, 8073256 - 8073455
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctatt 384  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||||||||| |||||||||||||||        | ||||| |||||||||||    
T  8073256 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtaatgttctatt 8073355  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     |||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||| ||||||||||||| |||||| |||||||||    
T  8073356 tatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaa-ccccacataacaccaa 8073454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 43207157 - 43207355
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||| ||||| |||| | ||||||||        | |||||||||||||||||     
T  43207157 cagggccgtccctaagaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtattttttttaaaagagcaatgttctattt 43207256  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  || ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43207257 atattttttaaaagataaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 43207355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 285 - 485
Target Start/End: Original strand, 38681010 - 38681211
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctat 383  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||||||| ||         | ||||||||||||||||    
T  38681010 tcagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaatcaaaacataattttttttaaaagagcaatgttctat 38681109  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||||| |||||||||||||||    
T  38681110 ttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaaaccccacctaacacca 38681209  T
Q  484 aa 485  Q
    ||    
T  38681210 aa 38681211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 34290554 - 34290754
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctatt 384  Q
    |||||| |||| | |||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||||||         | || | ||||||||||||    
T  34290554 cagggccgtccttaagaattcggaggctcggctctgggaatgaaaagaagtcagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatt 34290653  T
Q  385 gatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaa 484  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||    
T  34290654 tatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaa 34290753  T
Q  485 a 485  Q
    |    
T  34290754 a 34290754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 44708657 - 44708465
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||| |||||| ||||||||  ||| ||||||||||||||| ||||| |||||||||||||||        | || || ||||||||||| |||||||    
T  44708657 gtccctaagaattcggaggctcaactctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagaaatgttctatttatatttt 44708558  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  44708557 ttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaa 44708465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 287 - 485
Target Start/End: Original strand, 3953816 - 3954014
Alignment:
Q  287 agggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattga 386  Q
    ||||| ||||||||||||| ||||| || |||| || |||||||||||| ||||| |||||| |||| |||        | |||| |||||||||||| |    
T  3953816 agggccgtccctgagaattcggaggttccgctctggaaatgaaaagaggccagtgataaaattaaaatgtattttttttaaaagaacaatgttctattta 3953915  T
Q  387 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||    
T  3953916 tattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaacaccaaa 3954014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 27078486 - 27078687
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||| ||||||| ||||| || |||||||||||||||||| |||||||||||| ||          | || |||||||||||||    
T  27078486 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27078585  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  27078586 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacacca 27078685  T
Q  484 aa 485  Q
    ||    
T  27078686 aa 27078687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 27084283 - 27084484
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||| ||||||| ||||| || |||||||||||||||||| |||||||||||| ||          | || |||||||||||||    
T  27084283 cagggccgtccctgagaattcggaggcttggctctggaaatgaaaagaggtcagtgataaaatcaaaacataatttttttttaaaaaagcaatgttctat 27084382  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||||| |||||| |||||||||||    
T  27084383 ttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaaacccctacctaacacca 27084482  T
Q  484 aa 485  Q
    ||    
T  27084483 aa 27084484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 36715942 - 36716143
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn--agaagagcaatgttctat 383  Q
    |||||| ||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||| ||||| ||          | ||||||||||||||||    
T  36715942 cagggccgtccctgagaattcggaggctcggctctggaaatgaaaagaggccagtgataaaataaaaacataatttttatttaaaagagcaatgttctat 36716041  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||| ||||| |||||||||||||||||    
T  36716042 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagggacccccacctaacacca 36716141  T
Q  484 aa 485  Q
    ||    
T  36716142 aa 36716143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 50939152 - 50939351
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||| |||||| || |||||||||| | ||||||||||||| ||||| |||||||||||||||        | || ||||||| ||||||     
T  50939152 cagggccgtccctaagaattcgggggctcggctctgagaatgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgatctattt 50939251  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  50939252 atattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccgcctaacaccaaa 50939351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 298 - 485
Target Start/End: Complemental strand, 18372658 - 18372467
Alignment:
Q  298 tgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaaa 397  Q
    |||||||| ||||||||| | | ||||||||||||||||||||| |||||||||||||||        | ||||||||||||||||| ||||||||||||    
T  18372658 tgagaattcggaggctcgacactgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaa 18372559  T
Q  398 agataaatacaaggtgccgtatatat----gcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||||| |||||||||    ||||||||| || ||||||||||||||||| ||||||||||||| ||||| |||||||||||    
T  18372558 agataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaacaccaaa 18372467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 284 - 485
Target Start/End: Original strand, 53149230 - 53149432
Alignment:
Q  284 atcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttcta 382  Q
    |||| ||| ||| ||||||||| |||||||| | |||||||||||||||||  ||||| ||||||||||||||          | |||||| ||||||||    
T  53149230 atcacggccgtctctgagaattcggaggctcagttcggggaatgaaaagagaccagtgataaaatcaaaacgtttttttttttaaaagagcgatgttcta 53149329  T
Q  383 ttgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacc 482  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| || || | |||||||||||| ||||||||||||||||||||||||||||    
T  53149330 tttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgaggaacccccacctaacacc 53149429  T
Q  483 aaa 485  Q
    |||    
T  53149430 aaa 53149432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 293 - 481
Target Start/End: Complemental strand, 37168548 - 37168359
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctattgatattt 391  Q
    |||||| |||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||||         | || | |||||||||||| ||||||    
T  37168548 gtccctaagaattcggaggctcggctctgggaatgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaaaaacaatgttctatttatattt 37168449  T
Q  392 tttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    ||||||||||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||    
T  37168448 tttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccacctaacac 37168359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 285 - 485
Target Start/End: Complemental strand, 42098990 - 42098789
Alignment:
Q  285 tcagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn-agaagagcaatgttctat 383  Q
    ||||||| ||||||||||||| | |||||| ||||||| |||||||||||| ||||| ||||||||||| ||          | |||||| |||||||||    
T  42098990 tcagggccgtccctgagaattcgaaggctcagctcgggaaatgaaaagaggccagtgataaaatcaaaatgtctttttttttaaaagagcgatgttctat 42098891  T
Q  384 tgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    | |||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||||||||||||||| || ||||||||    
T  42098890 ttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgaggaacccctacttaacacca 42098791  T
Q  484 aa 485  Q
    ||    
T  42098790 aa 42098789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 373 - 485
Target Start/End: Original strand, 53506890 - 53507002
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaaccccc 472  Q
    |||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  53506890 caatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaaccccc 53506989  T
Q  473 acctaacaccaaa 485  Q
    |||||||||||||    
T  53506990 acctaacaccaaa 53507002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 323 - 485
Target Start/End: Original strand, 9878643 - 9878805
Alignment:
Q  323 gaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatata 422  Q
    ||||||||||||||||||| ||||||| |||||||        | ||||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||    
T  9878643 gaatgaaaagaggtcagtgataaaatctaaacgtattttttttaaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatata 9878742  T
Q  423 tgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    ||||||||||||| ||||||||||||||| | ||||||| ||||||||||| ||||| |||||    
T  9878743 tgcggtacacccaaaggtgaaaatgactatcgtatacataaggaacccccatctaacgccaaa 9878805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 286 - 485
Target Start/End: Original strand, 54407073 - 54407275
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnn----agaagagcaatgttct 381  Q
    |||||| |||||| |||||| ||||||||||||| ||||||||||||||| | ||| ||||||||||||||             | || | |||||||||    
T  54407073 cagggccgtccctaagaattcggaggctcggctctgggaatgaaaagaggccggtgataaaatcaaaacgtttttttttttaaaaaaaaaacaatgttct 54407172  T
Q  382 attgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacac 481  Q
    ||| ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| || ||||||||||||||||    
T  54407173 atttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccacctaacac 54407271  T
Q  482 caaa 485  Q
    ||||    
T  54407272 caaa 54407275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 293 - 465
Target Start/End: Complemental strand, 36606145 - 36605973
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||||| |||| ||||| ||||||| || |||||||||||||||||| |||||||||||||||        |  |||||||||||||||| |||||||    
T  36606145 gtccctgaaaattcggaggttcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaatagagcaatgttctatttatatttt 36606046  T
Q  393 ttaaaa-gataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgagg 465  Q
    |||||| ||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |||||||||||    
T  36606045 ttaaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgagg 36605973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 286 - 474
Target Start/End: Original strand, 50258542 - 50258731
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| || |||||||||| ||||||||||||| ||||| |||||||| |||||| |||||||||||| ||        | |||||| ||||||||||     
T  50258542 cagggccgttcctgagaattcggaggctcggctctgggaacgaaaagagatcagtgataaaatcaaaacatatttttttaaaaagagcgatgttctattt 50258641  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatgcggtacacccata-ggtgaaaatgactaccatatacatgaggaacccccac 474  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||  | ||||||||||||||   ||| ||||||||||||||||    
T  50258642 atattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgaggaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 402 - 483
Target Start/End: Original strand, 29620423 - 29620504
Alignment:
Q  402 aaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacacca 483  Q
    |||||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  29620423 aaatacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacacca 29620504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 54574828 - 54574929
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||| |||| ||||||||||||| |||||||||||||||||||||| | || ||||| ||||||||||||||||||||    
T  54574828 aagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgaggaa 54574927  T
Q  468 cc 469  Q
    ||    
T  54574928 cc 54574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 485
Target Start/End: Complemental strand, 48157309 - 48157127
Alignment:
Q  293 gtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattgatatttt 392  Q
    |||||| |||||| |||||||||| || |||||| |||||||| ||||| ||||||||||||  |        | ||  |||||| |||||| |||||||    
T  48157309 gtccctaagaattcggaggctcggttccgggaataaaaagaggccagtgataaaatcaaaacacatttttaaaaaaaatgcaatgatctatttatatttt 48157210  T
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||||| ||||||          |||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||| ||||    
T  48157209 ttaaaagataaatataaggtg----------gcggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacttaacatcaaa 48157127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 8420425 - 8420330
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||  ||||||||| | |||||||| ||| || |||| | ||||||||    
T  8420425 aatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtatatacgaggaacc 8420330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 32319162 - 32319257
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| | |||||||||||||||||||||| |||  |||||||||||||||||||| |||||||||| |||| | |||| | ||||||||    
T  32319162 aatgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattactatcttatatacgaggaacc 32319257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 26279647 - 26279544
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactac-ca-tatacatgagg 465  Q
    |||| |||||||||||| | ||||||||||||||||||| |||||| |||||||||||  |||||||| || ||||||| ||||| || |||||||||||    
T  26279647 aagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactacacattatacatgagg 26279548  T
Q  466 aacc 469  Q
    ||||    
T  26279547 aacc 26279544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 357
Target Start/End: Original strand, 48720429 - 48720500
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgta 357  Q
    |||||| |||||| |||||| ||||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  48720429 cagggccgtccctaagaattgggaggctcggctctgggaatgaaaagaggtaagtgataaaatcaaaacgta 48720500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 374 - 464
Target Start/End: Original strand, 28689368 - 28689458
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgag 464  Q
    ||||||||||| | |||||  |||||||||||||||||||||||||||||||| || | ||| |||||||||| ||| || ||||||||||    
T  28689368 aatgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgag 28689458  T

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Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 348
Target Start/End: Original strand, 29620364 - 29620426
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaat 348  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||    
T  29620364 cagggccgtccctgagaattcggaggctcggctctgggaatgaaaagaggtcagtgataaaat 29620426  T

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Target: chr3; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 790041 - 789940
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||| ||||||| | ||||||||||  |||||||||||||| | ||||||||  ||||||||| |||| ||||| || |||||||||||||||||    
T  790041 aagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgaggaa 789942  T
Q  468 cc 469  Q
    ||    
T  789941 cc 789940  T

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Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 368 - 464
Target Start/End: Complemental strand, 49393194 - 49393099
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgag 464  Q
    |||| ||||||||| || | |||||||||||||||||||||||| | ||||||||||  ||||||||| |||| ||||| |||||| ||||||||||    
T  49393194 aagaacaatgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgag 49393099  T

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Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  378 ttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtaca 431  Q
    ||||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

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Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 25855526 - 25855426
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||| ||||||||| ||||||||||  || |||||| || ||||||| |||||| |||||| || |||    
T  25855526 aagaacaatgttctatttaaattttttaaaagataa-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtatacacgaagaa 25855428  T
Q  468 cc 469  Q
    ||    
T  25855427 cc 25855426  T

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Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 368 - 442
Target Start/End: Complemental strand, 42453509 - 42453435
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtga 442  Q
    |||| |||||||| ||| | |||||||||||||||||||||||||| | |||||||||| |||||| | ||||||    
T  42453509 aagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacacctaaaggtga 42453435  T

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Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 354
Target Start/End: Original strand, 53506815 - 53506869
Alignment:
Q  300 agaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaac 354  Q
    |||||| | ||||||||||| ||||||||| ||||| ||||| ||||||||||||    
T  53506815 agaattcgaaggctcggctctgggaatgaagagaggccagtgataaaatcaaaac 53506869  T

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Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 469
Target Start/End: Complemental strand, 52374761 - 52374660
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||   | |||||||||| ||| |||||| ||||| |||| | | ||| |||||| |||||| ||||||||| |||    
T  52374761 aagaacaatgttctatttaaatttttttttaaataaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatgaagaa 52374662  T
Q  468 cc 469  Q
    ||    
T  52374661 cc 52374660  T

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Target: scaffold1590 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 368 - 469
Target Start/End: Original strand, 259 - 360
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||| ||||||||| |||    
T  259 aagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatgaa 358  T
Q  468 cc 469  Q
    ||    
T  359 cc 360  T

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Target: scaffold0012 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 206496 - 206591
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| | ||||| |||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||| |||||||||||||||    
T  206496 aatgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

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Target: scaffold0018 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 373 - 469
Target Start/End: Original strand, 173516 - 173612
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||| | ||||||||||||||||||||||||| ||||||||||||| |||||||| |||| ||||| |||||| ||||| |||||||||    
T  173516 caatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgaggaacc 173612  T

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Target: scaffold0097 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 373 - 469
Target Start/End: Complemental strand, 39022 - 38926
Alignment:
Q  373 caatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    |||||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||| || | |||||||| |||||| |||| ||||||||||    
T  39022 caatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgaggaacc 38926  T

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Target: scaffold0001 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 424
Target Start/End: Complemental strand, 183244 - 183106
Alignment:
Q  286 cagggctgtccctgagaatttggaggctcggctcggggaatgaaaagaggtcagtggtaaaatcaaaacgtannnnnnnnagaagagcaatgttctattg 385  Q
    |||||| |||||||| ||||  |||||||||||| ||||||||||||||| ||||| |||||| ||||||||        | |||||  ||||||||||     
T  183244 cagggccgtccctgaaaattcagaggctcggctctgggaatgaaaagaggccagtgataaaattaaaacgtattttttttaaaagagagatgttctattt 183145  T
Q  386 atattttttaaaagataaatacaaggtgccgtatatatg 424  Q
    |||||||||||||||||||||||| ||  ||||||||||    
T  183144 atattttttaaaagataaatacaaagtatcgtatatatg 183106  T

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Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 420 - 485
Target Start/End: Complemental strand, 181969 - 181904
Alignment:
Q  420 atatgcggtacacccataggtgaaaatgactaccatatacatgaggaacccccacctaacaccaaa 485  Q
    |||||||||||| ||| ||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaa 181904  T

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Target: scaffold0182 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 368 - 467
Target Start/End: Original strand, 23994 - 24093
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||| | |||| ||| ||| |||||    
T  23994 aagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcataaggaa 24093  T

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Target: scaffold0007 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 368 - 468
Target Start/End: Original strand, 230860 - 230960
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaa 467  Q
    |||| |||||||||||| | |||| |||||||||||||  ||||||  ||||||||||| || ||||| |||||||||| |||||| |||||||||||||    
T  230860 aagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgaggaa 230959  T
Q  468 c 468  Q
    |    
T  230960 c 230960  T

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Target: scaffold1320 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 469
Target Start/End: Complemental strand, 1450 - 1355
Alignment:
Q  374 aatgttctattgatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||| | | ||||||||||||||||| ||||||| ||||||||||  |||||||| | |||||||| |||| | |||||||||||||||    
T  1450 aatgttctatttaaaatttttaaaagataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgaggaacc 1355  T

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Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 40166 - 40086
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||  |||||||||| || | | |||||||||| ||||    
T  40166 ttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 40086  T

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Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 469
Target Start/End: Complemental strand, 138226 - 138146
Alignment:
Q  389 ttttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||||||||||||||||||||||||| ||||  ||||||||  |||||||||| || | | |||||||||| ||||    
T  138226 ttttttaaaagataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgagcaacc 138146  T

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Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 351360 - 351413
Alignment:
Q  393 ttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaat 446  Q
    ||||||||||||||||||||| ||||||||||  ||||||||| ||||||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaat 351413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 16167 - 16123
Alignment:
Q  368 aagagcaatgttctattgatattttttaaaagataaatacaaggt 412  Q
    ||||| ||||||||||| | |||||||||||||||||||||||||    
T  16167 aagagaaatgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 469
Target Start/End: Complemental strand, 16095 - 16028
Alignment:
Q  402 aaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatacatgaggaacc 469  Q
    ||||||||| || ||||| ||||||||||| ||| || ||||||| |||||| |||||||||| ||||    
T  16095 aaatacaagatgtcgtatgtatgcggtacatccaaagatgaaaatcactaccgtatacatgagaaacc 16028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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