View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8099_high_8 (Length: 288)
Name: NF8099_high_8
Description: NF8099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8099_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 33360013 - 33359755
Alignment:
| Q |
1 |
cactttgcttcacagtcgcatgtaggagcagcactcacacgagaagtcattgttgttttgtattttgtatttttgaagaaaatatcacatcacatataaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33360013 |
cactttgcttcacagtcgcatgtaggagcagcactcacacgagaagtcattgttgttttgtattttgtatttttgaagaaaatatcacatcacatataaa |
33359914 |
T |
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| Q |
101 |
tnnnnnnnnnnnnnnnnnnnntaaccttatcctctttttaattttgagtgtcccttggatgataattgagttctataattaagaagttaaatacagacac |
200 |
Q |
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| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
33359913 |
tagagagac------------taaccttatcctctttttaattttgagtgtcccttggatgataattgagttctataattaagaagttaaatacacacac |
33359826 |
T |
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| Q |
201 |
cacaaagagaaaaaacggtccaatcc-aatggttatcggaaattaacaagagagaggattagcggccatag |
270 |
Q |
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|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
33359825 |
cacaaagagaaaaaacggtccaatccaaatggttatcagaaattaacaagagagaggattagcggccatag |
33359755 |
T |
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