View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8099_low_2 (Length: 634)

Name: NF8099_low_2
Description: NF8099
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8099_low_2
NF8099_low_2
[»] chr7 (42 HSPs)
chr7 (18-319)||(29603250-29603558)
chr7 (18-319)||(29749736-29750044)
chr7 (18-213)||(29742812-29743007)
chr7 (496-622)||(4582893-4583019)
chr7 (497-612)||(43686016-43686130)
chr7 (496-612)||(37109846-37109962)
chr7 (497-607)||(7334769-7334879)
chr7 (497-622)||(32432432-32432552)
chr7 (497-622)||(32821114-32821239)
chr7 (497-605)||(17842664-17842772)
chr7 (498-622)||(43925081-43925202)
chr7 (525-612)||(29173543-29173630)
chr7 (164-213)||(29730086-29730135)
chr7 (498-607)||(38258521-38258630)
chr7 (496-612)||(12165726-12165842)
chr7 (495-622)||(5657542-5657669)
chr7 (497-607)||(18797304-18797412)
chr7 (512-607)||(23111180-23111275)
chr7 (525-612)||(26980326-26980413)
chr7 (529-612)||(27421450-27421533)
chr7 (529-612)||(30055534-30055617)
chr7 (537-622)||(6546534-6546619)
chr7 (497-622)||(21991611-21991736)
chr7 (531-611)||(9355898-9355978)
chr7 (496-626)||(27283718-27283848)
chr7 (512-612)||(31520794-31520894)
chr7 (495-622)||(8861258-8861385)
chr7 (488-626)||(12390687-12390825)
chr7 (512-622)||(22687229-22687339)
chr7 (529-607)||(38053493-38053571)
chr7 (539-603)||(34362228-34362292)
chr7 (512-612)||(37347012-37347112)
chr7 (495-613)||(10359284-10359402)
chr7 (525-607)||(24211744-24211826)
chr7 (529-622)||(31579125-31579223)
chr7 (513-622)||(44413440-44413550)
chr7 (512-626)||(48928621-48928734)
chr7 (537-613)||(10481619-10481696)
chr7 (525-626)||(48928354-48928454)
chr7 (499-563)||(8299192-8299256)
chr7 (497-606)||(26524404-26524513)
chr7 (537-592)||(37704182-37704238)
[»] chr5 (46 HSPs)
chr5 (495-612)||(40133383-40133500)
chr5 (497-622)||(36860423-36860548)
chr5 (496-622)||(21088816-21088942)
chr5 (496-612)||(36866761-36866877)
chr5 (19-220)||(32784633-32784841)
chr5 (525-612)||(699178-699265)
chr5 (499-622)||(5837557-5837680)
chr5 (512-622)||(1429195-1429305)
chr5 (512-622)||(5112363-5112473)
chr5 (497-622)||(8741936-8742062)
chr5 (499-612)||(26268076-26268189)
chr5 (499-611)||(27318548-27318660)
chr5 (497-612)||(19119859-19119974)
chr5 (537-612)||(30969384-30969459)
chr5 (493-603)||(15724486-15724596)
chr5 (527-612)||(9200263-9200348)
chr5 (488-607)||(22255172-22255292)
chr5 (496-612)||(5829896-5830016)
chr5 (496-607)||(7693229-7693340)
chr5 (529-612)||(24886136-24886219)
chr5 (497-607)||(39572819-39572929)
chr5 (525-622)||(22019660-22019757)
chr5 (525-622)||(22980821-22980918)
chr5 (495-607)||(23116287-23116399)
chr5 (529-612)||(14919588-14919671)
chr5 (537-607)||(17158095-17158165)
chr5 (498-612)||(32563150-32563264)
chr5 (499-612)||(25500986-25501099)
chr5 (495-612)||(35511537-35511654)
chr5 (488-592)||(13956425-13956529)
chr5 (498-606)||(31705677-31705785)
chr5 (497-592)||(12910350-12910445)
chr5 (499-612)||(7208923-7209037)
chr5 (497-607)||(22974147-22974257)
chr5 (525-607)||(31786711-31786793)
chr5 (539-612)||(11898044-11898117)
chr5 (497-614)||(38528294-38528411)
chr5 (558-606)||(6824547-6824595)
chr5 (558-622)||(25668710-25668774)
chr5 (501-612)||(8436970-8437081)
chr5 (497-612)||(35826543-35826658)
chr5 (512-583)||(35933917-35933988)
chr5 (525-622)||(27330334-27330429)
chr5 (537-607)||(28416592-28416662)
chr5 (558-604)||(42342794-42342840)
chr5 (494-574)||(16004474-16004555)
[»] chr6 (16 HSPs)
chr6 (499-622)||(21017171-21017294)
chr6 (497-607)||(3880013-3880123)
chr6 (497-612)||(8513233-8513348)
chr6 (497-607)||(4318897-4319007)
chr6 (497-607)||(5627391-5627501)
chr6 (491-607)||(1945827-1945944)
chr6 (499-622)||(6088910-6089033)
chr6 (537-612)||(33893071-33893146)
chr6 (537-607)||(15491655-15491725)
chr6 (512-615)||(29182178-29182281)
chr6 (529-607)||(7055289-7055367)
chr6 (495-607)||(6091257-6091368)
chr6 (499-622)||(30353417-30353540)
chr6 (488-614)||(7235101-7235227)
chr6 (512-612)||(18498448-18498549)
chr6 (23-99)||(13441465-13441541)
[»] chr2 (30 HSPs)
chr2 (491-622)||(4166916-4167047)
chr2 (494-607)||(33551079-33551192)
chr2 (525-612)||(13711492-13711579)
chr2 (497-626)||(4264151-4264280)
chr2 (512-612)||(39167451-39167551)
chr2 (529-612)||(27350026-27350109)
chr2 (499-612)||(3176941-3177054)
chr2 (495-612)||(19313850-19313967)
chr2 (496-607)||(44913661-44913772)
chr2 (512-607)||(26357592-26357687)
chr2 (529-612)||(37905740-37905823)
chr2 (525-607)||(19289416-19289498)
chr2 (493-607)||(35958905-35959019)
chr2 (558-622)||(5881600-5881664)
chr2 (529-612)||(43770927-43771010)
chr2 (530-612)||(4478402-4478484)
chr2 (525-607)||(11366474-11366556)
chr2 (497-607)||(17071830-17071940)
chr2 (512-582)||(18494386-18494456)
chr2 (530-612)||(43648333-43648415)
chr2 (497-622)||(29242216-29242341)
chr2 (555-612)||(33902124-33902181)
chr2 (499-612)||(36641988-36642101)
chr2 (525-607)||(41463943-41464025)
chr2 (558-607)||(4763692-4763741)
chr2 (497-606)||(17054190-17054299)
chr2 (527-612)||(31570822-31570907)
chr2 (539-612)||(33660456-33660529)
chr2 (537-622)||(33709310-33709395)
chr2 (528-612)||(19424716-19424800)
[»] chr8 (27 HSPs)
chr8 (512-612)||(9864162-9864262)
chr8 (491-612)||(12876102-12876223)
chr8 (497-622)||(36695032-36695157)
chr8 (497-614)||(40862418-40862536)
chr8 (496-607)||(10555283-10555394)
chr8 (495-622)||(6098584-6098711)
chr8 (496-626)||(13307621-13307751)
chr8 (494-612)||(23854507-23854625)
chr8 (497-612)||(1204926-1205041)
chr8 (497-612)||(16446951-16447066)
chr8 (512-607)||(37970600-37970695)
chr8 (525-607)||(8803891-8803973)
chr8 (497-607)||(41362517-41362624)
chr8 (529-607)||(30654664-30654742)
chr8 (497-622)||(38643977-38644102)
chr8 (497-612)||(1150181-1150296)
chr8 (529-612)||(11727055-11727138)
chr8 (529-612)||(31933962-31934045)
chr8 (497-612)||(34952107-34952222)
chr8 (512-622)||(465856-465966)
chr8 (497-607)||(43643676-43643786)
chr8 (496-612)||(5300022-5300138)
chr8 (497-612)||(16222862-16222977)
chr8 (497-612)||(27082914-27083029)
chr8 (497-612)||(34894966-34895081)
chr8 (558-607)||(1149713-1149762)
chr8 (537-595)||(43025741-43025799)
[»] chr3 (35 HSPs)
chr3 (512-612)||(34132941-34133041)
chr3 (491-612)||(4015445-4015566)
chr3 (497-622)||(35844317-35844442)
chr3 (512-612)||(24489032-24489132)
chr3 (525-622)||(29099374-29099471)
chr3 (512-612)||(3655272-3655372)
chr3 (496-612)||(51213051-51213167)
chr3 (499-622)||(46297822-46297945)
chr3 (529-622)||(44186561-44186654)
chr3 (500-607)||(22446140-22446247)
chr3 (496-612)||(37203057-37203173)
chr3 (530-610)||(47481546-47481626)
chr3 (497-612)||(40552329-40552444)
chr3 (525-604)||(54505827-54505906)
chr3 (529-607)||(2007956-2008034)
chr3 (497-607)||(48354932-48355042)
chr3 (491-612)||(21193591-21193712)
chr3 (496-612)||(37157698-37157813)
chr3 (529-612)||(4761719-4761802)
chr3 (563-622)||(11466881-11466940)
chr3 (529-607)||(3362276-3362354)
chr3 (525-622)||(7327542-7327640)
chr3 (529-607)||(20373371-20373449)
chr3 (558-607)||(21009877-21009926)
chr3 (537-626)||(33378841-33378930)
chr3 (536-609)||(43975961-43976034)
chr3 (512-587)||(2613896-2613971)
chr3 (529-612)||(26941330-26941413)
chr3 (494-583)||(44891495-44891583)
chr3 (558-622)||(14586730-14586794)
chr3 (512-612)||(40935997-40936097)
chr3 (568-612)||(42506145-42506189)
chr3 (497-563)||(55343403-55343469)
chr3 (512-612)||(11357434-11357535)
chr3 (537-581)||(33698219-33698263)
[»] chr4 (41 HSPs)
chr4 (499-622)||(17167715-17167838)
chr4 (499-622)||(17173292-17173415)
chr4 (497-602)||(4205116-4205221)
chr4 (499-608)||(27396618-27396727)
chr4 (498-607)||(37775670-37775779)
chr4 (495-622)||(49375964-49376092)
chr4 (497-607)||(9139247-9139355)
chr4 (497-622)||(35021121-35021246)
chr4 (497-607)||(34361592-34361702)
chr4 (495-613)||(39397916-39398034)
chr4 (525-614)||(54499332-54499422)
chr4 (527-612)||(19089549-19089634)
chr4 (525-622)||(32592121-32592218)
chr4 (512-612)||(25701153-25701253)
chr4 (499-622)||(36493774-36493897)
chr4 (495-622)||(55241190-55241317)
chr4 (512-622)||(30002710-30002820)
chr4 (525-622)||(7703545-7703642)
chr4 (497-607)||(25184113-25184223)
chr4 (497-607)||(32912681-32912791)
chr4 (529-607)||(37287766-37287844)
chr4 (529-622)||(879634-879727)
chr4 (499-612)||(47253751-47253863)
chr4 (512-612)||(34948193-34948293)
chr4 (568-612)||(37663837-37663881)
chr4 (19-99)||(49340198-49340278)
chr4 (525-612)||(4598021-4598107)
chr4 (539-622)||(23761114-23761197)
chr4 (525-622)||(29584286-29584381)
chr4 (512-622)||(35025674-35025784)
chr4 (497-607)||(50697242-50697352)
chr4 (497-582)||(4396326-4396411)
chr4 (495-612)||(28003082-28003199)
chr4 (558-607)||(50764791-50764840)
chr4 (493-612)||(19440744-19440864)
chr4 (512-612)||(46888253-46888353)
chr4 (19-99)||(49351562-49351642)
chr4 (497-604)||(3042611-3042718)
chr4 (497-612)||(55477987-55478106)
chr4 (551-607)||(4934303-4934360)
chr4 (537-622)||(33816619-33816704)
[»] scaffold0002 (2 HSPs)
scaffold0002 (497-612)||(134-249)
scaffold0002 (520-608)||(94457-94545)
[»] chr1 (35 HSPs)
chr1 (499-622)||(238568-238690)
chr1 (494-612)||(15752022-15752140)
chr1 (512-612)||(47279200-47279300)
chr1 (525-612)||(11742415-11742502)
chr1 (496-607)||(38823209-38823320)
chr1 (497-607)||(1547283-1547393)
chr1 (529-607)||(10922755-10922833)
chr1 (525-607)||(32267058-32267140)
chr1 (493-607)||(42721031-42721145)
chr1 (537-622)||(48620673-48620758)
chr1 (497-612)||(2959744-2959859)
chr1 (520-607)||(9903124-9903211)
chr1 (497-612)||(18422647-18422762)
chr1 (526-612)||(51128884-51128970)
chr1 (495-622)||(27267254-27267378)
chr1 (520-612)||(28564846-28564938)
chr1 (525-584)||(7079167-7079226)
chr1 (497-612)||(10182073-10182188)
chr1 (525-612)||(30254448-30254534)
chr1 (529-607)||(23999375-23999453)
chr1 (497-622)||(15382929-15383054)
chr1 (555-612)||(21289726-21289783)
chr1 (537-622)||(32216091-32216176)
chr1 (512-612)||(37451297-37451397)
chr1 (525-607)||(27533050-27533132)
chr1 (537-626)||(3534968-3535057)
chr1 (525-607)||(37618964-37619048)
chr1 (497-622)||(39393379-39393504)
chr1 (512-607)||(47682564-47682658)
chr1 (488-607)||(3309135-3309253)
chr1 (497-607)||(16415641-16415752)
chr1 (497-612)||(34012442-34012557)
chr1 (497-607)||(19899839-19899949)
chr1 (496-612)||(30327017-30327133)
chr1 (126-190)||(35157004-35157068)
[»] scaffold0022 (1 HSPs)
scaffold0022 (499-607)||(146091-146199)
[»] scaffold0291 (1 HSPs)
scaffold0291 (525-612)||(7915-8002)
[»] scaffold0061 (1 HSPs)
scaffold0061 (526-612)||(43986-44072)
[»] scaffold0017 (1 HSPs)
scaffold0017 (526-612)||(154715-154801)
[»] scaffold0009 (1 HSPs)
scaffold0009 (537-588)||(42388-42439)


Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 319
Target Start/End: Original strand, 29603250 - 29603558
Alignment:
Q  18 gtaccttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttctgca-------agatacg 110  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||| ||||||||||||||||       ||| |||    
T  29603250 gtaccttccttctgatgctaccagaagtgttgactacgtgctttcgcaatgcctcgcactcaaaatcattgattacatcttctgcatcgtagaagacacg 29603349  T
Q  111 tttgatccgttgcagccattcacgaagctcgtgattctgcttctgctttagctcagcatccaacagcacagctttgatgagtgacacagtgtttttaatc 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  29603350 tttgatctgttgcagccattcacgaagctcgtgattctgcttctgctttaactcagcatccaagagcactgctttgatgagtgacacagtgtttttaatc 29603449  T
Q  211 tcttgtagatcatcatagacgccgagtgccgatgaagcttctttaacagcaagagaagcaaccttggtgataaatgattcagcaagactaaagagaaatg 310  Q
    ||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  29603450 tctcgtagatcatcatagacgccgagtgccaatgaagcttcttcaacagcacgagaagcaaccttggtgataaatgattcagcaaggctaaagagaaatg 29603549  T
Q  311 attcggcca 319  Q
    |||| ||||    
T  29603550 attctgcca 29603558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 319
Target Start/End: Complemental strand, 29750044 - 29749736
Alignment:
Q  18 gtaccttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttctgca-------agatacg 110  Q
    |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||| |||| |||||||| ||||||||||||||||       ||| |||    
T  29750044 gtaccttccttctgatgctaccagaagtgttgactacgtgctttcgcaatgcctcgcactcaaaatcattgattacatcttctgcatcgtagaagacacg 29749945  T
Q  111 tttgatccgttgcagccattcacgaagctcgtgattctgcttctgctttagctcagcatccaacagcacagctttgatgagtgacacagtgtttttaatc 210  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  29749944 tttgatctgttgcagccattcacgaagctcgtgattctgcttctgctttaactcagcatccaagagcactgctttgatgagtgacacagtgtttttaatc 29749845  T
Q  211 tcttgtagatcatcatagacgccgagtgccgatgaagcttctttaacagcaagagaagcaaccttggtgataaatgattcagcaagactaaagagaaatg 310  Q
    ||| |||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  29749844 tctcgtagatcatcatagacgccgagtgccaatgaagcttcttcaacagcacgagaagcaaccttggtgataaatgattcagcaaggctaaagagaaatg 29749745  T
Q  311 attcggcca 319  Q
    |||| ||||    
T  29749744 attctgcca 29749736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 213
Target Start/End: Complemental strand, 29743007 - 29742812
Alignment:
Q  18 gtaccttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttctgcaagatacgtttgatc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29743007 gtaccttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttctgcaagatacgtttgatc 29742908  T
Q  118 cgttgcagccattcacgaagctcgtgattctgcttctgctttagctcagcatccaacagcacagctttgatgagtgacacagtgtttttaatctct 213  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29742907 tgttgcagccattcacgaagctcgtgattctgcttctgctttagctcagcatccaacagcacagctttgatgagtgacacagtgtttttaatctct 29742812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 496 - 622
Target Start/End: Original strand, 4582893 - 4583019
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | |||||||||||| |||||||| || ||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||    
T  4582893 tggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaatactatagtatcaaaaatgttgtgagtaacaccccactatttgtacaatg 4582992  T
Q  596 acatcaaaagtttagtctccgtagtat 622  Q
    |||||||||||| |||| || ||||||    
T  4582993 acatcaaaagttcagtccccatagtat 4583019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 43686016 - 43686130
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||||||| ||||||||| | ||||||||||| |||| ||| ||||||||||||||||||| |||||| |||||||||||     
T  43686016 ggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaacactataatatcaaaaatgttgtgagtaaca-cccactgtttgtacaatgg 43686114  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  43686115 catcaaaagttcagtc 43686130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 37109846 - 37109962
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | |||||||  ||| ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||  |||||||||||    
T  37109846 tggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatg 37109945  T
Q  596 acatcaaaagtttagtc 612  Q
    |||||||||||| ||||    
T  37109946 acatcaaaagttcagtc 37109962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 7334769 - 7334879
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||| | ||||||  || | ||||||||||| ||||||||||| ||||  |||||| ||||  |||||||||||||||| ||||||||||||    
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaacactataacataaaatatgtaatgagtaacaccccactgtttgtacaatga 7334868  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  7334869 catcaaaagtt 7334879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 497 - 622
Target Start/End: Original strand, 32432432 - 32432552
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||||||| ||| |||| || ||||||||||| |||      |||||||||||||||||||||||| | ||||||||||||    
T  32432432 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatc-----aaaaatgttgtgagtaacaccccattgtttgtacaatga 32432526  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||||| ||||||    
T  32432527 catcaaaagttcagtctccatagtat 32432552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 497 - 622
Target Start/End: Complemental strand, 32821239 - 32821114
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| ||| ||||||| ||||||||||| ||||  || |||||||| ||||||||||| ||||| |||||||||||     
T  32821239 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaatataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatgg 32821140  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||  ||||||||    
T  32821139 catcaaaagttcagtcctcgtagtat 32821114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 497 - 605
Target Start/End: Complemental strand, 17842772 - 17842664
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  ||| ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||  ||||||||||||    
T  17842772 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatga 17842673  T
Q  597 catcaaaag 605  Q
    |||||||||    
T  17842672 catcaaaag 17842664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 622
Target Start/End: Original strand, 43925081 - 43925202
Alignment:
Q  498 gaaaattctactgggaagtcacgaaattgacttttttgt-tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    ||||||||||| |  ||||||||||| ||| ||||||   ||||||||||||| |||||||||||||||||||||||||||| |||    ||||||||||    
T  43925081 gaaaattctacggtaaagtcacgaaaatgattttttttagtgaagttaacattgtagtataaaaaatgttgtgagtaacacctcac----tgtacaatga 43925176  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||| | ||||||    
T  43925177 catcaaaagttcagtctacatagtat 43925202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 29173543 - 29173630
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||| || ||||||||||| | |||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  29173543 tgacttttctggtgaagttaacactgtagtatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtc 29173630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 29730086 - 29730135
Alignment:
Q  164 cagcatccaacagcacagctttgatgagtgacacagtgtttttaatctct 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29730086 cagcatccaacagcacagctttgatgagtgacacagtgtttttaatctct 29730135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 498 - 607
Target Start/End: Original strand, 38258521 - 38258630
Alignment:
Q  498 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 597  Q
    ||||||||||| | |||||||  ||| ||| ||||||| ||||||||||| ||||  |||||||||||  ||||||||||| |||  |||||||||||||    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccacaccgtttgtacaatgac 38258620  T
Q  598 atcaaaagtt 607  Q
    ||||||||||    
T  38258621 atcaaaagtt 38258630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 12165726 - 12165842
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||| | ||||||   ||| |||||||| || ||||||||||| ||||| ||  ||| ||||||||||||||||||||| |||||||| ||    
T  12165726 tggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaacactatagcatccaaagtgttgtgagtaacaccccactgtttgtacagtg 12165825  T
Q  596 acatcaaaagtttagtc 612  Q
     ||||||||||| ||||    
T  12165826 gcatcaaaagttaagtc 12165842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 495 - 622
Target Start/End: Complemental strand, 5657669 - 5657542
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | ||||||| || | |||||||| |  ||||||||||| ||||  || |||| ||||||||||||||||||||| |||||||| |    
T  5657669 atggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagt 5657570  T
Q  595 gacatcaaaagtttagtctccgtagtat 622  Q
    | ||||||||||| ||||| | ||||||    
T  5657569 ggcatcaaaagttcagtcttcatagtat 5657542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 18797304 - 18797412
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | ||||||||||| ||||||||||| ||    |||||||||||  |||||||||||||||| ||||||||||||    
T  18797304 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactaac--ataaaaaatgtaatgagtaacaccccactgtttgtacaatga 18797401  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  18797402 catcaaaagtt 18797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 512 - 607
Target Start/End: Original strand, 23111180 - 23111275
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| |||| ||| |||| || ||||||||||| ||||  || |||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  23111180 gaagtcatgaaaatgatttttctggtgaagttaacactataacatcaaaaatattgtgagtaacacaccactatttgtacaatggcatcaaaagtt 23111275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 26980326 - 26980413
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||| || ||||||||||||||||| || |||| ||||||||||||||||||||  |||||||| || ||||||||||| ||||    
T  26980326 tgacttttatggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcagtc 26980413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 27421533 - 27421450
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| ||||  || |||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  27421533 ttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtc 27421450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 529 - 612
Target Start/End: Original strand, 30055534 - 30055617
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| |||| ||| |||| |||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  30055534 ttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 30055617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 622
Target Start/End: Original strand, 6546534 - 6546619
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||| || |||| ||||| |||||||||||||||||||||||| | |||||||||||||| | ||| ||||||    
T  6546534 tgaagttaacactatagcatcaaaagtgttgcgagtaacaccccactatttgtacagtaacatcaaaagtttactatccatagtat 6546619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 497 - 622
Target Start/End: Original strand, 21991611 - 21991736
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | ||| |||| || ||||||||||| ||||| || |||| ||||| ||||||||||||||| |||||||| ||     
T  21991611 ggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaacactatagcatcaaaattgttgcgagtaacaccccactgtttgtacagtgt 21991710  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| |||| || ||||||    
T  21991711 catcaaaagttcagtccccatagtat 21991736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 531 - 611
Target Start/End: Complemental strand, 9355978 - 9355898
Alignment:
Q  531 ttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||| |||| |||||| ||||| ||||||||||| ||||| || |||||||| |||||||| ||||||||||||||||||    
T  9355978 ttttggtgaatttaacactatagcataaaaaatgtagtgagcaataccccactgtttgtacagtgacatcaaaagtttagt 9355898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 496 - 626
Target Start/End: Original strand, 27283718 - 27283848
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | ||||| |  ||| ||| ||||||| ||||||||||| ||||  || ||||||||  |||||||||||||||  |||||||||||    
T  27283718 tggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccaccgtttgtacaatg 27283817  T
Q  596 acatcaaaagtttagtctccgtagtattatc 626  Q
    | |||||||||| ||||  | ||||||||||    
T  27283818 aaatcaaaagttcagtcctcatagtattatc 27283848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 31520894 - 31520794
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| |||| ||||||||||| ||||||||| | ||||  || |||||| | ||||||||||| ||| | |||||||| |||||||||||||| |||    
T  31520894 gaagtcatgaaaatgacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacactccattgtttgtacagtgacatcaaaagttcagt 31520795  T
Q  612 c 612  Q
    |    
T  31520794 c 31520794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 495 - 622
Target Start/End: Original strand, 8861258 - 8861385
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | ||||||| || | |||||||| |   |||||||||| ||||| || |||| |||| ||| |||||||||||| |||||||| |    
T  8861258 atggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaacactatagcatcaaaagtgttatgaataacaccccactgtttgtacagt 8861357  T
Q  595 gacatcaaaagtttagtctccgtagtat 622  Q
    | ||||||||||| |||| || ||||||    
T  8861358 ggcatcaaaagttaagtccccatagtat 8861385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 488 - 626
Target Start/End: Complemental strand, 12390825 - 12390687
Alignment:
Q  488 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 587  Q
    |||||| | |||||||||||  | |||||||  | || |||||||||| ||||||||||| ||||  || |||| |||  ||||||||| |||||| |||    
T  12390825 tttaaaaaaggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaacactataacatcaaaagtgtaatgagtaacatcccactgttt 12390726  T
Q  588 gtacaatgacatcaaaagtttagtctccgtagtattatc 626  Q
    || || ||||||||||||||  ||| || ||||||||||    
T  12390725 gtgcagtgacatcaaaagttatgtccccatagtattatc 12390687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 622
Target Start/End: Original strand, 22687229 - 22687339
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| || | |||||||| || ||||||||||| ||||  || |||||||||||||||||||| ||||| ||||| || ||  |||||||||| |||    
T  22687229 gaagtcatgagaatgacttttctgatgaagttaacactataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagttcagt 22687328  T
Q  612 ctccgtagtat 622  Q
    | || ||||||    
T  22687329 ccccatagtat 22687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 38053493 - 38053571
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| ||||||||| | ||||  |||||||||||  ||||||| |||| ||| |||||||||||||||||||||||    
T  38053493 ttttttggtgaagttaatactataacataaaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagtt 38053571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 539 - 603
Target Start/End: Complemental strand, 34362292 - 34362228
Alignment:
Q  539 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaa 603  Q
    ||||||||| ||||| || |||| ||||||||||||||||||||| |||||||| || |||||||    
T  34362292 aagttaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaa 34362228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 37347012 - 37347112
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| |||| ||| ||||||| ||||||||| | ||||  || |||||| |  |||||||||||||| | |||||||| |||||||||||||| |||    
T  37347012 gaagtcatgaaaatgatttttttggtgaagttaatactataccatcaaaaatataatgagtaacaccccattgtttgtacagtgacatcaaaagttcagt 37347111  T
Q  612 c 612  Q
    |    
T  37347112 c 37347112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 613
Target Start/End: Complemental strand, 10359402 - 10359284
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | ||||||| || | |||||||| || | || ||||  |||||| || |||| ||| |||||||||| || ||||||| |||| |    
T  10359402 atggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatcttatagcatcaaaagtgtagtgagtaacatcctactatttatacagt 10359303  T
Q  595 gacatcaaaagtttagtct 613  Q
    ||||||||||||| |||||    
T  10359302 gacatcaaaagttcagtct 10359284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 607
Target Start/End: Original strand, 24211744 - 24211826
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||||| ||| ||| || |||| |||||||||||    
T  24211744 tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctactgtttatagaatggcatcaaaagtt 24211826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 529 - 622
Target Start/End: Complemental strand, 31579223 - 31579125
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccact-----atttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||| ||||||||||| ||||  || ||||||||  ||||||||||||||||     |||| ||||||||||||||||||| ||||| | ||||||    
T  31579223 ttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttaatttatacaatgacatcaaaagttcagtcttcatagtat 31579125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 513 - 622
Target Start/End: Complemental strand, 44413550 - 44413440
Alignment:
Q  513 aagtcacgaaattgacttttttgt-tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||| |||| ||||||||||   ||||||||||| ||||  || |||||| | ||||||||||||||| | |||||||| ||| ||||||||||  ||    
T  44413550 aagtcatgaaaatgactttttttaatgaagttaacactataacatcaaaaatatagtgagtaacaccccaatgtttgtacactgaaatcaaaagttcggt 44413451  T
Q  612 ctccgtagtat 622  Q
    |||| ||||||    
T  44413450 ctccatagtat 44413440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 626
Target Start/End: Complemental strand, 48928734 - 48928621
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| || | |||||||| || |||||| |||| ||||  || |||| ||| ||||||| |||||||||||||||||  || ||||||||||| |||    
T  48928734 gaagtcatgagaatgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagt 48928635  T
Q  612 ctccgtagtattatc 626  Q
    | || ||||||||||    
T  48928634 c-ccatagtattatc 48928621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 613
Target Start/End: Original strand, 10481619 - 10481696
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacacccc-actatttgtacaatgacatcaaaagtttagtct 613  Q
    ||||||||||| ||||  ||||||||| |  ||||||||||||| ||| |||||||||||||||||||| || |||||    
T  10481619 tgaagttaacactataacataaaaaatataatgagtaacacccccactgtttgtacaatgacatcaaaaattcagtct 10481696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 525 - 626
Target Start/End: Complemental strand, 48928454 - 48928354
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtatta 624  Q
    |||||||| || |||||| |||| ||||  || |||| ||| ||||||| |||||||||||||||||  || ||||||||||| |||| || ||||||||    
T  48928454 tgacttttctggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttcagtc-ccatagtatta 48928356  T
Q  625 tc 626  Q
    ||    
T  48928355 tc 48928354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 563
Target Start/End: Original strand, 8299192 - 8299256
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaat 563  Q
    |||||||||  | |||||||||||| |||||||| || ||||||||||| |||||||| ||||||    
T  8299192 aaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactatagtatcaaaaat 8299256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 497 - 606
Target Start/End: Complemental strand, 26524513 - 26524404
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | |||||||| || ||| ||||||| ||||  || ||||||||||||| |||||| ||| | ||||| || ||     
T  26524513 ggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaacactataacatcaaaaatgttgtgactaacactccattgtttgtgcagtgg 26524414  T
Q  597 catcaaaagt 606  Q
    ||||||||||    
T  26524413 catcaaaagt 26524404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 592
Target Start/End: Original strand, 37704182 - 37704238
Alignment:
Q  537 tgaagttaacattatagtataaaaaa-tgttgtgagtaacaccccactatttgtaca 592  Q
    ||||||||||| ||||| |||||||| ||| ||||||||||||||| | ||||||||    
T  37704182 tgaagttaacactatagcataaaaaaatgtagtgagtaacaccccattgtttgtaca 37704238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 495 - 612
Target Start/End: Original strand, 40133383 - 40133500
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | |||||||||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40133383 atggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacattatagtatcaaaaatgttgtgagtaacaccccactatttgtacaat 40133482  T
Q  595 gacatcaaaagtttagtc 612  Q
    | ||||||||||| ||||    
T  40133483 ggcatcaaaagttcagtc 40133500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 497 - 622
Target Start/End: Original strand, 36860423 - 36860548
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||||||| ||| |||| || ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36860423 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactatagtataaaaaatgttgtgagtaacaccccactgtttgtacaatga 36860522  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| |||| || ||||||    
T  36860523 catcaaaagttcagtccccatagtat 36860548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 496 - 622
Target Start/End: Complemental strand, 21088942 - 21088816
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||   |||||||||||| |||||||||| | ||||||||| | | |||||||||||||||||||||| |||||||||| ||||||||||    
T  21088942 tggaaaattctacgatgaagtcacgaaaatgactttttttggtgaagttaa-actgtagtataaaaaatgttgtgagtgacaccccactgtttgtacaat 21088844  T
Q  595 gacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||||| |||| || ||||||    
T  21088843 gacatcaaaagttcagtccccatagtat 21088816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 36866761 - 36866877
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | |||||||||||| ||| |||| || ||||||||||| |||| ||| |||||| ||||||||||||||||||| |||||||||||    
T  36866761 tggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgtgagtaacaccccactgtttgtacaatg 36866860  T
Q  596 acatcaaaagtttagtc 612  Q
     ||||||||||| ||||    
T  36866861 gcatcaaaagttcagtc 36866877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 19 - 220
Target Start/End: Original strand, 32784633 - 32784841
Alignment:
Q  19 taccttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttctgc-------aagatacgt 111  Q
    ||||||||||| ||||||||| ||||||||||  |||||||| ||||| ||||| |||| ||||||||||||||||||||| ||       ||||  ||     
T  32784633 taccttccttctgatgctacctgaagtgttgatgatgtgctttcgcaaggcctcgcactcaaaatcatcgattacatcttcggcatcatagaagacccgc 32784732  T
Q  112 ttgatccgttgcagccattcacgaagctcgtgattctgcttctgctttagctcagcatccaacagcacagctttgatgagtgacacagtgtttttaatct 211  Q
    || ||| ||| || ||||||||| ||||| || ||||||   ||| || | ||||| ||||||| ||| |||||||||||||| ||||||||||| || |    
T  32784733 ttaatctgtttcaaccattcacgcagctcatggttctgccattgcgtttgttcagcgtccaacaacacggctttgatgagtgagacagtgtttttgattt 32784832  T
Q  212 cttgtagat 220  Q
    |||| ||||    
T  32784833 cttgaagat 32784841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 699178 - 699265
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||| || ||||||||||| ||||| ||||||||| | ||||||||||||||||| |||||||| |||||||||||||| ||||    
T  699178 tgacttttctgatgaagttaacactatagcataaaaaatctagtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtc 699265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 622
Target Start/End: Original strand, 5837557 - 5837680
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||| | ||| ||| || | |||||||| || ||||| ||||| ||||| || |||| ||||||||||||||||||||| |||||||| |||||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaacactatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtgaca 5837656  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    |||||| || ||||||| ||||||    
T  5837657 tcaaaatttcagtctccatagtat 5837680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 512 - 622
Target Start/End: Complemental strand, 1429305 - 1429195
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| |||| ||||| ||||| ||||||||||| ||||| || |||||| | ||||||||||||||||| |||||||| || |||||||| || |||    
T  1429305 gaagtcatgaaaatgactcttttggtgaagttaacactatagcatcaaaaatatagtgagtaacaccccactgtttgtacactggcatcaaaaattcagt 1429206  T
Q  612 ctccgtagtat 622  Q
    |||| ||||||    
T  1429205 ctccatagtat 1429195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 512 - 622
Target Start/End: Complemental strand, 5112473 - 5112363
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| |||| ||||||||||| ||||||||| | ||||  ||||||||| | ||||||||||||||||| |||||||| || ||||||||||| |||    
T  5112473 gaagtcatgaaaatgacttttttggtgaagttaatactataacataaaaaatatagtgagtaacaccccactgtttgtacagtggcatcaaaagttcagt 5112374  T
Q  612 ctccgtagtat 622  Q
    | || ||||||    
T  5112373 ccccatagtat 5112363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 497 - 622
Target Start/End: Complemental strand, 8742062 - 8741936
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatg 595  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| |||||||||||||| ||||| | |||||||||||    
T  8742062 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacacccccattgtttgtacaatg 8741963  T
Q  596 acatcaaaagtttagtctccgtagtat 622  Q
     ||||||||||| ||||||| ||||||    
T  8741962 gcatcaaaagttcagtctccatagtat 8741936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 612
Target Start/End: Original strand, 26268076 - 26268189
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||| | ||||||| || | ||| |||| || ||||||||||| ||||| || |||| |||| |||||||||||||||| |||||||  |||||    
T  26268076 aaaattctacagtgaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtgaca 26268175  T
Q  599 tcaaaagtttagtc 612  Q
    ||||||||||||||    
T  26268176 tcaaaagtttagtc 26268189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 611
Target Start/End: Complemental strand, 27318660 - 27318548
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    ||||||| || | ||||||| || | ||| |||| || ||||||||||| || |  ||||||||||| ||||||||||| ||||| ||||||||||||||    
T  27318660 aaaattcaacggtgaagtcatgagaatgatttttctggtgaagttaacactaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatgaca 27318561  T
Q  599 tcaaaagtttagt 611  Q
    |||||||||||||    
T  27318560 tcaaaagtttagt 27318548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 19119859 - 19119974
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| |||||  |||||||||||||| |||||||| |||    
T  19119859 ggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaacactatagcatcaaaagtgttgctagtaacaccccactgtttgtacagtga 19119958  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  19119959 catcaaaagttcagtc 19119974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 537 - 612
Target Start/End: Complemental strand, 30969459 - 30969384
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||||| ||||  || |||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  30969459 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttatacaatgacatcaaaagttcagtc 30969384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 493 - 603
Target Start/End: Original strand, 15724486 - 15724596
Alignment:
Q  493 atatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 592  Q
    |||||||||||||||  | ||||| | || | ||||||||||| ||||||||||| ||||  || |||| | ||||||||||||||||||| ||| ||||    
T  15724486 atatggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaacactataacatcaaaagttttgtgagtaacaccccactgtttataca 15724585  T
Q  593 atgacatcaaa 603  Q
    |||||||||||    
T  15724586 atgacatcaaa 15724596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 612
Target Start/End: Original strand, 9200263 - 9200348
Alignment:
Q  527 acttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||| || ||||||||||| ||||  || |||| ||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  9200263 acttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccacagtttgtacagtgacatcaaaagtttagtc 9200348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 488 - 607
Target Start/End: Original strand, 22255172 - 22255292
Alignment:
Q  488 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtat-aaaaaatgttgtgagtaacaccccactatt 586  Q
    |||||| | |||||| ||||| | |||||||  ||| | ||||||||| ||||||||||||||||  || |||||||||  |||||||||||||||  ||    
T  22255172 tttaaagaaggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaatgtaatgagtaacaccccaccgtt 22255271  T
Q  587 tgtacaatgacatcaaaagtt 607  Q
    ||||||||| |||||||||||    
T  22255272 tgtacaatggcatcaaaagtt 22255292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 5829896 - 5830016
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagt----ataaaaaatgttgtgagtaacaccccactatttgtac 591  Q
    ||||||||||||  | ||||||   ||| ||| ||||||| |||||||||||||||| |    |||||||||||  |||||||||||| ||  |||||||    
T  5829896 tggaaaattctagggtgaagtcgtaaaaatgatttttttggtgaagttaacattataattaacataaaaaatgtaatgagtaacaccctaccgtttgtac 5829995  T
Q  592 aatgacatcaaaagtttagtc 612  Q
    |||||||||||||||||||||    
T  5829996 aatgacatcaaaagtttagtc 5830016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 496 - 607
Target Start/End: Original strand, 7693229 - 7693340
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | |||||||  ||| |||||||| || ||||||||||| ||||  || |||| |||||||||||||| |||||| |||||||| ||    
T  7693229 tggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacatcccactgtttgtacagtg 7693328  T
Q  596 acatcaaaagtt 607  Q
     |||||||||||    
T  7693329 gcatcaaaagtt 7693340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 612
Target Start/End: Original strand, 24886136 - 24886219
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||| | ||||  || ||||||||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  24886136 ttttttggtgaagttaatactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 24886219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 39572819 - 39572929
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | |||||||| |  | ||||||| | |||| |||||||||||||||||||||||| ||||| ||||| || |||    
T  39572819 ggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaatactataatataaaaaatgttgtgagtaacactccactgtttgtgcagtga 39572918  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  39572919 catcaaaagtt 39572929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 622
Target Start/End: Original strand, 22019660 - 22019757
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||||||| || ||||||||| | ||||| || |||| ||||||||||||||||||| | |||||| | |||||||||||||| |||| || ||||||    
T  22019660 tgacttttctggtgaagttaaaactatagaatcaaaagtgttgtgagtaacaccccattgtttgtatagtgacatcaaaagttaagtccccttagtat 22019757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 622
Target Start/End: Original strand, 22980821 - 22980918
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||||||| || ||||||||||| |||||||| ||||||   |||||||| |||||||| ||||  ||||||||||||||||| |||| || ||||||    
T  22980821 tgacttttctggtgaagttaacactatagtatcaaaaatacagtgagtaataccccactgtttgagcaatgacatcaaaagttcagtccccatagtat 22980918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 495 - 607
Target Start/End: Complemental strand, 23116399 - 23116287
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | || |||| |||| ||||||||||  ||||||||||||||||  || |||| ||| ||||||| ||||||||| |||||||| |    
T  23116399 atggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacattataacatcaaaactgtagtgagtagcaccccactgtttgtacagt 23116300  T
Q  595 gacatcaaaagtt 607  Q
    |  ||||||||||    
T  23116299 ggaatcaaaagtt 23116287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 14919671 - 14919588
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||||||||  || ||||||||  ||||||||||| |||| ||| || |||||||||||||||| ||||    
T  14919671 ttttttgatgaagttaacattataacatcaaaaatgtaatgagtaacacctcactgtttatataatgacatcaaaagttcagtc 14919588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 537 - 607
Target Start/End: Complemental strand, 17158165 - 17158095
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| ||||  |||||||||||  |||||||||| ||||  |||||||||||||||||||||||    
T  17158165 tgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagtt 17158095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 498 - 612
Target Start/End: Original strand, 32563150 - 32563264
Alignment:
Q  498 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 597  Q
    ||||||||||  | |||||||  ||| ||| |||| || ||||||||||| ||||  || |||| ||||||||||||||| ||||| | |||||| ||||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaacactataacatcaaaagtgttgtgagtaacactccactgtctgtacagtgac 32563249  T
Q  598 atcaaaagtttagtc 612  Q
    |||||||||| ||||    
T  32563250 atcaaaagttcagtc 32563264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 25501099 - 25500986
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| || | |||||||| || | ||||||||| ||||| || |||| |||||||| ||||||| |||| |||||||| || ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactgcca 25501000  T
Q  599 tcaaaagtttagtc 612  Q
    ||||||||| ||||    
T  25500999 tcaaaagttaagtc 25500986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 495 - 612
Target Start/End: Complemental strand, 35511654 - 35511537
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    ||||||||| |||  | ||||||| |||| |||| ||| || ||||||||||||||||  || || | ||| ||||||||||| ||||| |||||| | |    
T  35511654 atggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacattataacatcaacactgtagtgagtaacactccactgtttgtaaagt 35511555  T
Q  595 gacatcaaaagtttagtc 612  Q
    ||||||||||||| ||||    
T  35511554 gacatcaaaagttcagtc 35511537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 488 - 592
Target Start/End: Complemental strand, 13956529 - 13956425
Alignment:
Q  488 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 587  Q
    ||||| || |||||||||||| | ||||||| |||| |||||||| |  ||||||||||| ||||  || |||| ||| |||||||||||| |||| |||    
T  13956529 tttaattaaggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaacactataacatcaaaactgtagtgagtaacacctcactgttt 13956430  T
Q  588 gtaca 592  Q
    |||||    
T  13956429 gtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 498 - 606
Target Start/End: Complemental strand, 31705785 - 31705677
Alignment:
Q  498 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 597  Q
    ||||||||||  | |||||||  ||| ||| ||||||| ||||||||||| ||||  || ||||||||   ||||||||||| ||  |||||||||||||    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacaccctaccgtttgtacaatgac 31705686  T
Q  598 atcaaaagt 606  Q
    |||||||||    
T  31705685 atcaaaagt 31705677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 592
Target Start/End: Original strand, 12910350 - 12910445
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 592  Q
    |||||||||||  | ||||||| |||| ||||||||||| ||||||||| | ||||  || |||||| | ||| ||||||||||||| ||||||||    
T  12910350 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactataacatcaaaaatatagtgcgtaacaccccactgtttgtaca 12910445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 612
Target Start/End: Complemental strand, 7209037 - 7208923
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 597  Q
    |||||||||| | |||||||  ||| |||||||||| | ||||||||||||| ||  ||||||||||    ||||||||||| ||  |||||||| ||||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttttttggtgaagttaacattgtaacataaaaaatgcaacgagtaacaccctaccgtttgtacattgac 7208938  T
Q  598 atcaaaagtttagtc 612  Q
    |||||||||| ||||    
T  7208937 atcaaaagttcagtc 7208923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 22974257 - 22974147
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||| | || | ||| ||||||| ||||||||||| ||||  || ||||| ||  ||||||||| |||||| |||||||||| |    
T  22974257 ggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaacactataacatcaaaaaagtaatgagtaacatcccactgtttgtacaataa 22974158  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  22974157 catcaaaagtt 22974147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 31786793 - 31786711
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| ||||||||||| ||||| || |||||||| ||||| |   ||||||| |||||||| || |||||||||||    
T  31786793 tgacttttttggtgaagttaacactatagcatgaaaaatgtagtgagcactgccccactgtttgtacagtggcatcaaaagtt 31786711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 539 - 612
Target Start/End: Original strand, 11898044 - 11898117
Alignment:
Q  539 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||| || |||| ||   |||||||||||| |||| ||||||| |||||||||||||||||||    
T  11898044 aagttaatattatagcatcaaaagtgcactgagtaacaccctactagttgtacagtgacatcaaaagtttagtc 11898117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 497 - 614
Target Start/End: Complemental strand, 38528411 - 38528294
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| ||  |||| || ||||||||||| ||||  || |||| |||  |||||||||||||| | ||| |||| |||    
T  38528411 ggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaacactataacatcaaaattgtaatgagtaacaccccattgtttatacagtga 38528312  T
Q  597 catcaaaagtttagtctc 614  Q
    ||||||||||| ||||||    
T  38528311 catcaaaagttcagtctc 38528294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 606
Target Start/End: Complemental strand, 6824595 - 6824547
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagt 606  Q
    |||| ||||||||||||||| ||||| |||||||| |||||||||||||    
T  6824595 aaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagt 6824547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 622
Target Start/End: Original strand, 25668710 - 25668774
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||| ||||||||||||||||||||| |||| ||| || ||||||||||| |||| || ||||||    
T  25668710 aaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaaagttcagtccccttagtat 25668774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 612
Target Start/End: Original strand, 8436970 - 8437081
Alignment:
Q  501 aattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatc 600  Q
    ||||||| || ||||||| || | ||| ||||||| |||| |||||| |||||  |  ||| ||| |||||||||| |||| | |||||||| |||||||    
T  8436970 aattctaatgtgaagtcatgagaatgatttttttggtgaaattaacactatagcttccaaagtgtagtgagtaacatcccattgtttgtacagtgacatc 8437069  T
Q  601 aaaagtttagtc 612  Q
    ||||||| ||||    
T  8437070 aaaagttcagtc 8437081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 35826658 - 35826543
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | ||||||||||  ||||||||| | ||||  || ||||||||  ||||||||||  || | |||||||| |||    
T  35826658 ggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaatactataacatcaaaaatgtactgagtaacacttcattgtttgtacagtga 35826559  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  35826558 catcaaaagttcagtc 35826543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 583
Target Start/End: Original strand, 35933917 - 35933988
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccact 583  Q
    ||||||| || | ||| ||||||| ||||||||||| ||||| || |||| |||||||||||||||| ||||    
T  35933917 gaagtcatgagaatgatttttttgatgaagttaacactatagaatcaaaagtgttgtgagtaacacctcact 35933988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 525 - 622
Target Start/End: Original strand, 27330334 - 27330429
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||||||| || ||||||||||| ||||  || |||| |||||  |||||||||  ||| ||||||||||| ||||||||||| ||||| | ||||||    
T  27330334 tgacttttctggtgaagttaacactataacatcaaaagtgttg--agtaacaccttactgtttgtacaatggcatcaaaagttcagtcttcatagtat 27330429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 537 - 607
Target Start/End: Complemental strand, 28416662 - 28416592
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| |||| ||| |||| | |||||||||||| |||||| |||||||| ||  ||||||||||    
T  28416662 tgaagttaacactataatatcaaaagtattgtgagtaacatcccactgtttgtacagtggaatcaaaagtt 28416592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 558 - 604
Target Start/End: Original strand, 42342794 - 42342840
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaa 604  Q
    ||||||||||||||||| |||||||| ||| |||| |||||||||||    
T  42342794 aaaaatgttgtgagtaataccccactgtttatacagtgacatcaaaa 42342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 574
Target Start/End: Complemental strand, 16004555 - 16004474
Alignment:
Q  494 tatggaaaattctactgggaagtcacga-aattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaa 574  Q
    ||||||||||||||  |  |||||| || ||||||||||| || ||||||||||| ||||  || |||||||||||||||||    
T  16004555 tatggaaaattctatggtaaagtcatgagaattgacttttctggtgaagttaacactataacatcaaaaatgttgtgagtaa 16004474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 3e-37; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 499 - 622
Target Start/End: Complemental strand, 21017294 - 21017171
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||| ||| | |||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  21017294 aaaattatacggtgaagtcacgaaaatgacttttttggtgaagttaacattgtagtataaaaaatgttgtgagtaacaccccattatttgtacaatggca 21017195  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    ||||||||| |||| || ||||||    
T  21017194 tcaaaagttcagtccccatagtat 21017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 3880123 - 3880013
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||||| | |||||||| || |||||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||||    
T  3880123 ggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacattatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaatga 3880024  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  3880023 catcaaaagtt 3880013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 8513233 - 8513348
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| |||| ||| |||| ||||||||||||||||||||| |||||||| |||    
T  8513233 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccactgtttgtacagtga 8513332  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  8513333 catcaaaagttcagtc 8513348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 4319007 - 4318897
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | ||||||||||| ||||||||||| ||||  || |||| |||| |||||||||||||||| |||||||| |||    
T  4319007 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaagtgttatgagtaacaccccactgtttgtacagtga 4318908  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  4318907 catcaaaagtt 4318897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 5627391 - 5627501
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||| ||||  ||||||||| |  ||||||||||||||||||||||| |||||    
T  5627391 ggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatataatgagtaacaccccactatttgtagaatga 5627490  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  5627491 catcaaaagtt 5627501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 607
Target Start/End: Original strand, 1945827 - 1945944
Alignment:
Q  491 aaatatggaaaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgt 589  Q
    ||||| |||||||||||| | |||||||  | | |||||||||| | ||||||||||| ||||  || ||||||||  |||||||||||||||| |||||    
T  1945827 aaataaggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgt 1945926  T
Q  590 acaatgacatcaaaagtt 607  Q
    | ||||||||||||||||    
T  1945927 agaatgacatcaaaagtt 1945944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 622
Target Start/End: Original strand, 6088910 - 6089033
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| || | ||| |||| || ||||||||||| |||||||| |||| ||||||||||||| ||||||| |||||| | || ||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtggca 6089009  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    ||||||||| |||| || ||||||    
T  6089010 tcaaaagttcagtcaccatagtat 6089033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 537 - 612
Target Start/End: Complemental strand, 33893146 - 33893071
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||||| ||||  || |||| |||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  33893146 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttgtacaatgatattaaaagttcagtc 33893071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 537 - 607
Target Start/End: Original strand, 15491655 - 15491725
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||||| ||  || |||| |||||||||||||||||||||||||||||| || |||||||||||    
T  15491655 tgaagttaacattgtaacatcaaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagtt 15491725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 512 - 615
Target Start/End: Original strand, 29182178 - 29182281
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| || | ||| ||| ||| ||||||||||| ||||  || |||| ||||||||||||||||||||| ||| |||| || ||||||||||| |||    
T  29182178 gaagtcatgagaatgattttattgatgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtgtcatcaaaagttcagt 29182277  T
Q  612 ctcc 615  Q
    ||||    
T  29182278 ctcc 29182281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 7055367 - 7055289
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| ||||||||||| ||||  ||||||||| |  | ||||||||| ||||||||||| ||||||||||||||||    
T  7055367 ttttttggtgaagttaacactataacataaaaaatataattagtaacacctcactatttgtagaatgacatcaaaagtt 7055289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 495 - 607
Target Start/End: Complemental strand, 6091368 - 6091257
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||| |||||||| || ||||||| |||| | | ||||||| | ||||||||||  ||  ||||||||||| ||||||||||| ||| | ||||||||||    
T  6091368 atgggaaattctattgtgaagtcatgaaaataatttttttggtaaagttaacatg-taacataaaaaatgtagtgagtaacacaccattgtttgtacaat 6091270  T
Q  595 gacatcaaaagtt 607  Q
    | |||||||||||    
T  6091269 gccatcaaaagtt 6091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 622
Target Start/End: Complemental strand, 30353540 - 30353417
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| || | |||||||| || ||||||||||||||||  || |||| ||||| |||||| | | |||| |||||||| || ||    
T  30353540 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattataacatcaaaagtgttgcgagtaatatctcactgtttgtacagtggca 30353441  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    || | |||| ||||||| ||||||    
T  30353440 tcgatagttcagtctccatagtat 30353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 614
Target Start/End: Complemental strand, 7235227 - 7235101
Alignment:
Q  488 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 587  Q
    ||||| ||||||||||||||  | ||||| | || | ||||||||  | |||||| |||| ||||  || |||| ||| ||||||| ||||||||| |||    
T  7235227 tttaattatggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaacactataacatcaaaagtgtagtgagtagcaccccactgttt 7235128  T
Q  588 gtacaatgacatcaaaagtttagtctc 614  Q
    ||||  || ||||||||||| ||||||    
T  7235127 gtacggtgccatcaaaagttcagtctc 7235101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 18498448 - 18498549
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatgacatcaaaagtttag 610  Q
    ||||||| || | |||||||  || ||||||||||||||||| || |||| ||| ||||| |||| ||||||  |||||||| || ||||||||||| ||    
T  18498448 gaagtcatgagaatgactttcctggtgaagttaacattatagcatcaaaagtgtagtgagcaacacccccacagtttgtacagtggcatcaaaagttcag 18498547  T
Q  611 tc 612  Q
    ||    
T  18498548 tc 18498549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 13441465 - 13441541
Alignment:
Q  23 ttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttc 99  Q
    ||||||| ||||||||| ||||||||||  || |||||  | || || ||||| | |||||||||||||||||||||    
T  13441465 ttccttctgatgctacctgaagtgttgatgatttgcttttgtaaggcttcacattcaaaatcatcgattacatcttc 13441541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 8e-35; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 491 - 622
Target Start/End: Original strand, 4166916 - 4167047
Alignment:
Q  491 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 590  Q
    ||||| |||||||||||  | |||||||||||| |||||||| || |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  4166916 aaataaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgtgagtaacaccccactgtttgta 4167015  T
Q  591 caatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||| ||||||||||| |||| || ||||||    
T  4167016 caatggcatcaaaagttcagtccccatagtat 4167047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 494 - 607
Target Start/End: Complemental strand, 33551192 - 33551079
Alignment:
Q  494 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 593  Q
    ||||||||||||||| | ||||||| || | ||||||||||  ||||||||||| ||||  || |||||||| ||||||||||||||||| |||||||||    
T  33551192 tatggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaacactataacatcaaaaatgtagtgagtaacaccccactgtttgtacaa 33551093  T
Q  594 tgacatcaaaagtt 607  Q
    ||||||||||||||    
T  33551092 tgacatcaaaagtt 33551079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 13711492 - 13711579
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||| || ||||||||||||||||| || |||| ||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  13711492 tgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagtgacatcaaaagtttagtc 13711579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 497 - 626
Target Start/End: Complemental strand, 4264280 - 4264151
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  | | |||||||| || | ||||||||| ||||| || |||| |||||||||||||| |||||| |||||||| |||    
T  4264280 ggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaacactatagcatcaaaagtgttgtgagtaacatcccactgtttgtacagtga 4264181  T
Q  597 catcaaaagtttagtctccgtagtattatc 626  Q
    ||||||||||| ||||||| ||||||||||    
T  4264180 catcaaaagttcagtctccatagtattatc 4264151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 39167551 - 39167451
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||||| | ||| ||||||| |||||||||||  ||||||| |||| | |||||||||||||| |||| ||||||||||||||||||||||| |||    
T  39167551 gaagtcacgagaatgatttttttgatgaagttaacagaatagtatcaaaagtattgtgagtaacacctcactgtttgtacaatgacatcaaaagttcagt 39167452  T
Q  612 c 612  Q
    |    
T  39167451 c 39167451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 27350109 - 27350026
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| ||||| || ||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||    
T  27350109 ttttttggtgaagttaacactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagtgacatcaaaagttcagtc 27350026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 499 - 612
Target Start/End: Original strand, 3176941 - 3177054
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||| |||||| |||||||| || ||||||||| | |||| ||| ||||||||| |||||||||| | ||| ||||||||||||||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaatactataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatgaca 3177040  T
Q  599 tcaaaagtttagtc 612  Q
    ||||||||| ||||    
T  3177041 tcaaaagttcagtc 3177054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 495 - 612
Target Start/End: Original strand, 19313850 - 19313967
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | |||||||  | | |||||||| || ||||||||||||||||| || |||| ||||||||||||||||  ||||||| |||| |    
T  19313850 atggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaacattatagcatcaaaagtgttgtgagtaacaccttactatttatacagt 19313949  T
Q  595 gacatcaaaagtttagtc 612  Q
    ||||||||||||| ||||    
T  19313950 gacatcaaaagttcagtc 19313967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 607
Target Start/End: Original strand, 44913661 - 44913772
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac-tatttgtacaat 594  Q
    ||||||||||||  | |||||||||||| |||||||| ||| |||||||||| | |||||| ||||||||||||||||||||| ||| | |||||| |||    
T  44913661 tggaaaattctatggtgaagtcacgaaaatgacttttatgt-gaagttaacactgtagtatcaaaaatgttgtgagtaacacctcacttgtttgtaaaat 44913759  T
Q  595 gacatcaaaagtt 607  Q
    ||||| |||||||    
T  44913760 gacataaaaagtt 44913772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 512 - 607
Target Start/End: Original strand, 26357592 - 26357687
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| |||| |||||||| || ||||||||||| ||||  || |||| ||| |||||||||| |||||| |||||||| ||||||||||||||    
T  26357592 gaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtgagtaacatcccactgtttgtacagtgacatcaaaagtt 26357687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 529 - 612
Target Start/End: Original strand, 37905740 - 37905823
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| ||||  |||||||||||   ||||||||||||||  ||||||||||||||||||||||| ||||    
T  37905740 ttttttggtgaagttaacactataacataaaaaatgtaacgagtaacaccccaccgtttgtacaatgacatcaaaagttcagtc 37905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 19289498 - 19289416
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| ||||||||||| ||||  || |||||| |  |||||||||||||| | |||||||||||||||||||||||    
T  19289498 tgacttttttgatgaagttaacactataacatcaaaaatataatgagtaacaccccattgtttgtacaatgacatcaaaagtt 19289416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 493 - 607
Target Start/End: Original strand, 35958905 - 35959019
Alignment:
Q  493 atatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 592  Q
    |||||||||||||||    |||||||  ||| ||||||||||| |||||||  || ||||  |||||||||||  |||| ||||||||||| ||||||||    
T  35958905 atatggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgccactataacataaaaaatgtaatgagcaacaccccactgtttgtaca 35959004  T
Q  593 atgacatcaaaagtt 607  Q
    ||||||| |||||||    
T  35959005 atgacattaaaagtt 35959019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 558 - 622
Target Start/End: Original strand, 5881600 - 5881664
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||||| |||| || ||||||    
T  5881600 aaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagttgagtccccttagtat 5881664  T

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Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 43771010 - 43770927
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| ||||  || |||| ||||||||||||||||||||| ||| |||| || ||||||||||| ||||    
T  43771010 ttttttggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttatacagtggcatcaaaagttcagtc 43770927  T

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Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 530 - 612
Target Start/End: Original strand, 4478402 - 4478484
Alignment:
Q  530 tttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||| ||||||||||| ||||  || |||| ||||||||||||||| ||| | |||||||| || ||||||||||||||||    
T  4478402 tttttggtgaagttaacactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtggcatcaaaagtttagtc 4478484  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 11366556 - 11366474
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| |||| |||||| ||||  || ||||||||  ||||||||| | ||||||||||| ||||||||||||||||    
T  11366556 tgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatctcactatttgtataatgacatcaaaagtt 11366474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 17071940 - 17071830
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |  | ||||||||||| ||||||||||| ||||  |  |||||||| || ||||||| | || ||||||||||||||    
T  17071940 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaacactataacaacaaaaatgtagtaagtaacatctcattatttgtacaatga 17071841  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  17071840 catcaaaagtt 17071830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 582
Target Start/End: Complemental strand, 18494456 - 18494386
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac 582  Q
    ||||||| |||| |||||||| || ||||||||||| ||||| || |||| ||||||||||||||||||||    
T  18494456 gaagtcatgaaaatgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccac 18494386  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 530 - 612
Target Start/End: Complemental strand, 43648415 - 43648333
Alignment:
Q  530 tttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||| ||||||||||| ||||  || ||||||||  ||||||||||| |||| |||||| |||||||||||||||| ||||    
T  43648415 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcagtc 43648333  T

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Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 622
Target Start/End: Complemental strand, 29242341 - 29242216
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| ||  ||||||| ||||||||| | ||||  ||||||||| | ||| ||||||||||||| |||||||| ||     
T  29242341 ggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaactataacataaaaaatatagtgcgtaacaccccactgtttgtacagtgg 29242242  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
     |||||||||| ||||| | ||||||    
T  29242241 tatcaaaagttcagtcttcatagtat 29242216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 612
Target Start/End: Original strand, 33902124 - 33902181
Alignment:
Q  555 ataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||||| |||||||| |||||||| |||||| |||||||||||||||| ||||    
T  33902124 ataaaaaatgtagtgagtaataccccactgtttgtaaaatgacatcaaaagttcagtc 33902181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 612
Target Start/End: Original strand, 36641988 - 36642101
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| || | |||||||| || |||| |||| | ||||| || |||| ||||| |||||||||| |||| |||||||| |||||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaatactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtgaca 36642087  T
Q  599 tcaaaagtttagtc 612  Q
    ||||||||| ||||    
T  36642088 tcaaaagttcagtc 36642101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 41464025 - 41463943
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    |||| |||||| ||||||||| | ||||  || |||| |||||||||||||||| |||| |||||||| || |||||||||||    
T  41464025 tgacatttttggtgaagttaatactataaaatcaaaagtgttgtgagtaacacctcactgtttgtacagtggcatcaaaagtt 41463943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 607
Target Start/End: Original strand, 4763692 - 4763741
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    |||| ||| ||||||||||||||||| |||||||| ||||||||||||||    
T  4763692 aaaactgtagtgagtaacaccccactgtttgtacagtgacatcaaaagtt 4763741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 497 - 606
Target Start/End: Complemental strand, 17054299 - 17054190
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |  | ||||||||||| ||||||||| | ||||  || |||||||| || ||||||| | || | ||||||||||||    
T  17054299 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaatactataacatcaaaaatgtagtaagtaacatctcattgtttgtacaatga 17054200  T
Q  597 catcaaaagt 606  Q
    ||||||||||    
T  17054199 catcaaaagt 17054190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 612
Target Start/End: Complemental strand, 31570907 - 31570822
Alignment:
Q  527 acttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||| || |||| |||||| ||||  || |||| |||||| |||||||||||||||||| || | |||||||||||||| ||||    
T  31570907 acttttctggtgaaattaacactataacattaaaagtgttgtaagtaacaccccactatttttatagtgacatcaaaagttcagtc 31570822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 539 - 612
Target Start/End: Complemental strand, 33660529 - 33660456
Alignment:
Q  539 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||| ||||  || |||| ||||||||||||||||| ||| |||||||| || ||||||||||| ||||    
T  33660529 aagttaacactataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtggcatcaaaagttcagtc 33660456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 622
Target Start/End: Complemental strand, 33709395 - 33709310
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||  || |||| ||||| ||||||||| ||||| || ||||| |||||||||||||| |||| || ||||||    
T  33709395 tgaagttaacactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcagtccccatagtat 33709310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 612
Target Start/End: Complemental strand, 19424800 - 19424716
Alignment:
Q  528 cttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||| || ||||||||||| ||||  || |||| ||||||||||||||||||| | ||| || | || ||||||||||||||||    
T  19424800 cttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacaccccattgtttatatagtggcatcaaaagtttagtc 19424716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 5e-33; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 9864162 - 9864262
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||||||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  9864162 gaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatgacatcaaaagttcagt 9864261  T
Q  612 c 612  Q
    |    
T  9864262 c 9864262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 491 - 612
Target Start/End: Original strand, 12876102 - 12876223
Alignment:
Q  491 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 590  Q
    |||| ||||||||||||  |  ||||||||||| |||||||| || ||||||||||| |||| |||||||||||||||||||||||||| ||| ||||||    
T  12876102 aaatttggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaacactataatataaaaaatgttgtgagtaacacccaactgtttgta 12876201  T
Q  591 caatgacatcaaaagtttagtc 612  Q
    ||||||||||||||||| ||||    
T  12876202 caatgacatcaaaagttcagtc 12876223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 497 - 622
Target Start/End: Complemental strand, 36695157 - 36695032
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| |||| ||| |||||||||||||||||||||||||| ||||||||||||    
T  36695157 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatga 36695058  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| |||| || ||||||    
T  36695057 catcaaaagttcagtccccatagtat 36695032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 497 - 614
Target Start/End: Original strand, 40862418 - 40862536
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtat-aaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    |||||||||||  | |||||||||||| | |||||| || ||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  40862418 ggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaatgttgtgagtaacaccccactgtttgtacaatg 40862517  T
Q  596 acatcaaaagtttagtctc 614  Q
     ||||||||||| ||||||    
T  40862518 gcatcaaaagttcagtctc 40862536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 496 - 607
Target Start/End: Complemental strand, 10555394 - 10555283
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||| | ||||||| || | ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||| ||||| |||||||||||    
T  10555394 tggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacactccactgtttgtacaatg 10555295  T
Q  596 acatcaaaagtt 607  Q
    ||||||||||||    
T  10555294 acatcaaaagtt 10555283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 495 - 622
Target Start/End: Complemental strand, 6098711 - 6098584
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | ||||||| |||| | ||||||||| ||||||||| | ||||| || |||||| | ||||||||||||||||| |||||||| |    
T  6098711 atggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactatagcatcaaaaatatagtgagtaacaccccactgtttgtacagt 6098612  T
Q  595 gacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||||| |||| || ||||||    
T  6098611 gacatcaaaagttcagtccccatagtat 6098584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 496 - 626
Target Start/End: Original strand, 13307621 - 13307751
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | ||||||| || | ||| |||| || ||||||||||| ||||  || |||| |||||||||||||||| ||||||||||||| ||    
T  13307621 tggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaacactataacatcaaaagtgttgtgagtaacacctcactatttgtacagtg 13307720  T
Q  596 acatcaaaagtttagtctccgtagtattatc 626  Q
    |||||||||||| |||| || ||||||||||    
T  13307721 acatcaaaagttcagtccccatagtattatc 13307751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 494 - 612
Target Start/End: Complemental strand, 23854625 - 23854507
Alignment:
Q  494 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 593  Q
    ||||||||| ||||| | ||||||| || | ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||| ||| ||||| |||    
T  23854625 tatggaaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacacccaactgtttgtgcaa 23854526  T
Q  594 tgacatcaaaagtttagtc 612  Q
    |||||||||||||| ||||    
T  23854525 tgacatcaaaagttcagtc 23854507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 1204926 - 1205041
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||| ||| | ||||||| || | |||||||| || ||||||||||| ||||  ||||||||||| |||||||||||  |||| ||||||||||||    
T  1204926 ggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgtagtgagtaacacatcactgtttgtacaatga 1205025  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  1205026 catcaaaagttcagtc 1205041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 16447066 - 16446951
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| |||||||| || | ||||||||| ||||  || |||| ||| ||||||||||||||||| |||||| ||||     
T  16447066 ggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtataatgg 16446967  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||||||||    
T  16446966 catcaaaagtttagtc 16446951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 512 - 607
Target Start/End: Complemental strand, 37970695 - 37970600
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| || | ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||||||||| ||||||||||| |||||||||||    
T  37970695 gaagtcatgagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgccatcaaaagtt 37970600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 8803973 - 8803891
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||| |||||||||||| ||||||||||||||||    
T  8803973 tgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacactccactatttgtagaatgacatcaaaagtt 8803891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 41362517 - 41362624
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||| | |||| ||||||||||| |||||||||||   ||| || |||||||| |||||||||||||||||||||||| | |||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaaca--ctagcat-aaaaatgtagtgagtaacaccccactatttgtatagtga 41362613  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  41362614 catcaaaagtt 41362624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 30654742 - 30654664
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||| |||||  ||||||||||||||||    
T  30654742 ttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgttgaatgacatcaaaagtt 30654664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 622
Target Start/End: Original strand, 38643977 - 38644102
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||| ||| || | ||||||||||| | ||||||||| ||||  || |||| ||||||||||||||||||||| |||||  | ||     
T  38643977 ggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtctagtgg 38644076  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||||| ||||||    
T  38644077 catcaaaagttcagtctccatagtat 38644102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 1150296 - 1150181
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||  ||||  || ||||||||  ||||||||| |||||| ||||||||| ||    
T  1150296 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacgctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaacga 1150197  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  1150196 catcaaaagttcagtc 1150181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 612
Target Start/End: Original strand, 11727055 - 11727138
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| ||||  || |||| |||||| ||||||||||||||||||||| | || ||||||||||| ||||    
T  11727055 ttttttggtgaagttaacactataacatcaaaagtgttgtaagtaacaccccactatttgtatagtggcatcaaaagttcagtc 11727138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 31934045 - 31933962
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| |||  ||| |||||| |  |||||||||||||||| ||| ||||||||||||||||||| ||||    
T  31934045 ttttttggtgaagttaacactatgatatcaaaaatataatgagtaacaccccactctttatacaatgacatcaaaagttcagtc 31933962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 34952222 - 34952107
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  |  ||||||  ||| |||||||| || | ||||||||| ||||  || |||| |||||||||||||| |||||| |||||||| |||    
T  34952222 ggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaacactatatcatcaaaagtgttgtgagtaacagcccactgtttgtacagtga 34952123  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  34952122 catcaaaagttcagtc 34952107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 622
Target Start/End: Original strand, 465856 - 465966
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||  ||| |||||||| || |||||||||||  |||  || |||| ||||||||||||||||||||| |||||||| || |||||||| || |||    
T  465856 gaagtcattaaaatgacttttgtggtgaagttaacacgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaaattcagt 465955  T
Q  612 ctccgtagtat 622  Q
    | || ||||||    
T  465956 ccccttagtat 465966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 43643786 - 43643676
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | ||||| ||||| ||||||||||| ||||  || ||||||||  |||||||||| | ||| ||||||||||||    
T  43643786 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 43643687  T
Q  597 catcaaaagtt 607  Q
    |||| ||||||    
T  43643686 catccaaagtt 43643676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 496 - 612
Target Start/End: Complemental strand, 5300138 - 5300022
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | ||||||| || | ||||||||||  ||||||||||| ||||| || |||| |||||| |||| ||| | ||| |||||||| ||    
T  5300138 tggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaacactatagcatcaaaagtgttgtaagtagcactctactgtttgtacagtg 5300039  T
Q  596 acatcaaaagtttagtc 612  Q
     ||||||||||| ||||    
T  5300038 gcatcaaaagttcagtc 5300022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 16222862 - 16222977
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||| | ||| ||| || | |||||||| || |||| |||||| ||||  ||||||||| | |||||||   ||||||  ||||||||||||    
T  16222862 ggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaacactataacataaaaaatatagtgagtagttccccacagtttgtacaatga 16222961  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  16222962 catcaaaagttcagtc 16222977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 27083029 - 27082914
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  | | |||||||| || ||||||||||| ||||| || |||| ||| ||||||||||||||||| ||||| || ||     
T  27083029 ggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcagtgg 27082930  T
Q  597 catcaaaagtttagtc 612  Q
    ||| ||||||| ||||    
T  27082929 cattaaaagttcagtc 27082914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 34894966 - 34895081
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| ||||  || || | ||| ||||||||||| ||||| |||||| | ||     
T  34894966 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34895065  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  34895066 catcaaaagttcagtc 34895081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 607
Target Start/End: Complemental strand, 1149762 - 1149713
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||  ||||||||| |||||| |||||||||||||||||||||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagtt 1149713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 43025741 - 43025799
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||  |||||||| |||| |||||||| ||| |||||||| |||||||||||    
T  43025741 tgaagttaacgatatagtatcaaaagtgttgtgattaataccccactctttgtacaatg 43025799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 5e-33; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 34132941 - 34133041
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||||||| ||||||||||| |||| |||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  34132941 gaagtcacgaaaatgacttttttggtgaaattaacactatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaatgacatcaaaagttcagt 34133040  T
Q  612 c 612  Q
    |    
T  34133041 c 34133041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 612
Target Start/End: Original strand, 4015445 - 4015566
Alignment:
Q  491 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 590  Q
    |||||||||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| ||||||||||||||||| ||| ||||||    
T  4015445 aaatatggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaacactatagcatcaaaagtgttgtgagtaacacccaactgtttgta 4015544  T
Q  591 caatgacatcaaaagtttagtc 612  Q
     | |||||||||||||| ||||    
T  4015545 gagtgacatcaaaagttcagtc 4015566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 497 - 622
Target Start/End: Original strand, 35844317 - 35844442
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||  |  ||||||||||||||||||||| |||| |||||||| |||    
T  35844317 ggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaacactataacaacaaaaatgttgtgagtaacacctcactgtttgtacagtga 35844416  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    |||||||||||||||| || ||||||    
T  35844417 catcaaaagtttagtccccatagtat 35844442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 24489132 - 24489032
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||||||| ||| ||||||  ||||||||| | |||||||| |||||||||||||||||||  ||||| |||| |||||||||||||||||| |||    
T  24489132 gaagtcacgaaaatgattttttttgtgaagttaagactatagtattaaaaatgttgtgagtaacattccactgtttgcacaatgacatcaaaagttcagt 24489033  T
Q  612 c 612  Q
    |    
T  24489032 c 24489032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 525 - 622
Target Start/End: Original strand, 29099374 - 29099471
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||||||| || ||||||||||| ||||  ||||||||||| ||||||||||||||||| |||||||| ||||||| |||||| |||| || ||||||    
T  29099374 tgacttttctggtgaagttaacactataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaagttcagtccccttagtat 29099471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 3655372 - 3655272
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||  ||| ||||||||||| | ||||||||| ||||  |||||||||||  |||||||||||||||  ||||||||||||||||||||||| |||    
T  3655372 gaagtcataaaaatgacttttttgataaagttaacactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaatgacatcaaaagttcagt 3655273  T
Q  612 c 612  Q
    |    
T  3655272 c 3655272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 496 - 612
Target Start/End: Complemental strand, 51213167 - 51213051
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | ||||||| || | ||||||||||| ||||||||||| | ||  |||||||||||  |||| ||||||||||| |||||||||||    
T  51213167 tggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactgtaacataaaaaatgtaatgagcaacaccccactgtttgtacaatg 51213068  T
Q  596 acatcaaaagtttagtc 612  Q
     ||||||||||| ||||    
T  51213067 gcatcaaaagttgagtc 51213051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 622
Target Start/End: Complemental strand, 46297945 - 46297822
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| |||| |||||||| || ||||||||||| ||||  || |||||| | ||||||||||| ||||| ||||||||||| |     
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatggcg 46297846  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    ||||||||| |||| |||||||||    
T  46297845 tcaaaagttcagtccccgtagtat 46297822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 529 - 622
Target Start/End: Complemental strand, 44186654 - 44186561
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||| ||||||||||| ||||| || |||| |||||||||||||||||| || ||| |||| |||||||||||||| |||| || ||||||    
T  44186654 ttttttggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtgacatcaaaagttcagtccccatagtat 44186561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 500 - 607
Target Start/End: Complemental strand, 22446247 - 22446140
Alignment:
Q  500 aaattctactgggaagtcacgaaattgactttttt-gttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    ||||||||| | ||||||| |||| |||||||||| | ||||||||||||||||  || |||||| | ||||||||||||||||| |||||||| || ||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacattatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtggca 22446149  T
Q  599 tcaaaagtt 607  Q
    |||||||||    
T  22446148 tcaaaagtt 22446140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 37203057 - 37203173
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | |||||||  ||| ||| ||||||| ||||||||||| ||||  || |||| ||| ||||||||||||||||| |||||||| ||    
T  37203057 tggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccactgtttgtacagtg 37203156  T
Q  596 acatcaaaagtttagtc 612  Q
     ||||||||||| ||||    
T  37203157 gcatcaaaagttcagtc 37203173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 530 - 610
Target Start/End: Original strand, 47481546 - 47481626
Alignment:
Q  530 tttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttag 610  Q
    |||||| ||||||||||| ||||  || ||||||||  |||||||||||||||| |||||| |||||||||||||||||||    
T  47481546 tttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatgacatcaaaagtttag 47481626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 40552444 - 40552329
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | |||||||||||  |||||||||| ||||  || ||||||||  |||||||||| ||||  ||||||||||||    
T  40552444 ggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaacactataacatcaaaaatgtaatgagtaacactccaccgtttgtacaatga 40552345  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  40552344 catcaaaagttcagtc 40552329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 604
Target Start/End: Original strand, 54505827 - 54505906
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaa 604  Q
    ||||||||||||||||||||||| ||||  || ||||||||  |||||||||||||| ||||| || |||||||||||||    
T  54505827 tgacttttttgttgaagttaacactataacatcaaaaatgtaatgagtaacaccccattatttatagaatgacatcaaaa 54505906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 2007956 - 2008034
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    |||||| |||||||||||| |||||  | |||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  2007956 tttttttttgaagttaacactatagcgttaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagtt 2008034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 48354932 - 48355042
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | ||| |||| || ||||||||||| |||| ||| ||||||||  |||||||||||||| | |||||||||||     
T  48354932 ggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaacactataatattaaaaatgtaatgagtaacaccccattgtttgtacaatgg 48355031  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  48355032 catcaaaagtt 48355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 612
Target Start/End: Original strand, 21193591 - 21193712
Alignment:
Q  491 aaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgta 590  Q
    ||||| |||||||||||  |  |||||| || | |||||||| || ||||||||||| | | | || |||| ||||||||||||||||||||| ||||||    
T  21193591 aaataaggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaacactgttgaatcaaaagtgttgtgagtaacaccccactgtttgta 21193690  T
Q  591 caatgacatcaaaagtttagtc 612  Q
     | |||||||||||||| ||||    
T  21193691 gagtgacatcaaaagttcagtc 21193712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 496 - 612
Target Start/End: Original strand, 37157698 - 37157813
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | ||||||| |||| || |||||||| ||||||||||| ||||  || |||| ||| |||||||||||||||||  ||||||| ||    
T  37157698 tggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaacactataacatcaaaattgtagtgagtaacaccccact-gttgtacagtg 37157796  T
Q  596 acatcaaaagtttagtc 612  Q
     ||||||||||| ||||    
T  37157797 gcatcaaaagttcagtc 37157813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 4761802 - 4761719
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||| | |||| ||| ||||||||  ||||||||||  |||| ||||||||||||||||||||||| ||||    
T  4761802 ttttttggtgaagttaatactataatatcaaaaatgtaatgagtaacacttcactgtttgtacaatgacatcaaaagttcagtc 4761719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 563 - 622
Target Start/End: Original strand, 11466881 - 11466940
Alignment:
Q  563 tgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||||||||||||| |||||||| || |||||||||||||||| || ||||||    
T  11466881 tgttgtgagtaacaccccactgtttgtacagtggcatcaaaagtttagtccccatagtat 11466940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 3362276 - 3362354
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| ||||||||||| ||||| || | |||| | |||||||||| ||||||||||||||| || |||||||||||    
T  3362276 ttttttggtgaagttaacactatagcatcagaaatatagtgagtaacatcccactatttgtacagtggcatcaaaagtt 3362354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 622
Target Start/End: Complemental strand, 7327640 - 7327542
Alignment:
Q  525 tgacttttttgttgaagttaa-cattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||  ||||||||| || ||||  || |||| ||||||||||||||| ||| |||||||||| |||||||||||||| |||| || ||||||    
T  7327640 tgacttttttagtgaagttaaacactataacatcaaaagtgttgtgagtaacactccattatttgtacagtgacatcaaaagttcagtccccatagtat 7327542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Complemental strand, 20373449 - 20373371
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| ||||||||| | ||||  || ||||||||   ||||||||||||||| |||||||||||||||||||||||    
T  20373449 ttttttggtgaagttaatactataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatgacatcaaaagtt 20373371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 558 - 607
Target Start/End: Complemental strand, 21009926 - 21009877
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  21009926 aaaaatgtaatgagtaacaccccactatttgtagaatgacatcaaaagtt 21009877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 626
Target Start/End: Complemental strand, 33378930 - 33378841
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtattatc 626  Q
    |||||| |||| |||||||| |||| ||| |||||||  |||||| |||||||||  |||||||||||||| |||| || ||||||||||    
T  33378930 tgaagtcaacactatagtatcaaaagtgtagtgagtagtaccccaatatttgtacggtgacatcaaaagttcagtccccatagtattatc 33378841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 536 - 609
Target Start/End: Complemental strand, 43976034 - 43975961
Alignment:
Q  536 ttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagttta 609  Q
    ||||||| |||| ||||| || |||| ||| ||||||| ||| ||||||||||||| |||||||||||||||||    
T  43976034 ttgaagtcaacactatagcatcaaaagtgtagtgagtagcactccactatttgtacgatgacatcaaaagttta 43975961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 512 - 587
Target Start/End: Original strand, 2613896 - 2613971
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 587  Q
    |||||||  ||| ||||||||||||||||||||||| ||||  |  |||| |||||||||||||||| ||||||||    
T  2613896 gaagtcattaaaatgacttttttgttgaagttaacactataacaccaaaagtgttgtgagtaacaccacactattt 2613971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 529 - 612
Target Start/End: Complemental strand, 26941413 - 26941330
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| ||||||||||| ||||  || |||| | |  |||||||||||||||| |||||| |||||||||||||||| ||||    
T  26941413 ttttttggtgaagttaacactataaaatcaaaattataatgagtaacaccccactgtttgtataatgacatcaaaagttcagtc 26941330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 494 - 583
Target Start/End: Original strand, 44891495 - 44891583
Alignment:
Q  494 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccact 583  Q
    ||||||||||| ||| | ||||||| |||| ||||||||| || |||||||||| ||||  || |||| |||||||||||||| ||||||    
T  44891495 tatggaaaattatacggtgaagtcatgaaaatgactttttggt-gaagttaacactataacatcaaaagtgttgtgagtaacatcccact 44891583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 558 - 622
Target Start/End: Complemental strand, 14586794 - 14586730
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||| |||||||||||||||| |||||||| |||| ||| ||||||||||| ||| || ||||||    
T  14586794 aaaagtgttgtgagtaacacctcactatttatacagtgatatcaaaagttttgtccccttagtat 14586730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 40935997 - 40936097
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| || | ||| |||| || ||||||||||| ||||| || |||| ||||| |||||||||| || | ||| |||| |||||||||||||| |||    
T  40935997 gaagtcatgagaatgatttttctggtgaagttaacactatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagttcagt 40936096  T
Q  612 c 612  Q
    |    
T  40936097 c 40936097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 42506189 - 42506145
Alignment:
Q  568 tgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||    
T  42506189 tgagtaataccccactgtttgtacaatgacatcaaaagttcagtc 42506145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 563
Target Start/End: Complemental strand, 55343469 - 55343403
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaat 563  Q
    |||||||||||  | |||||||||||| |||||||| || ||||||||||| |||| ||| ||||||    
T  55343469 ggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaacactataatatcaaaaat 55343403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 11357535 - 11357434
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatgacatcaaaagtttag 610  Q
    ||||||| || | |||||||| || ||||||||||| ||||| || |||| | | |||||||||| ||||||| |||||||| |  ||||||||||| ||    
T  11357535 gaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagttcag 11357436  T
Q  611 tc 612  Q
    ||    
T  11357435 tc 11357434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 537 - 581
Target Start/End: Original strand, 33698219 - 33698263
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacacccca 581  Q
    ||||||||||| ||||  || ||||||||||||||||||||||||    
T  33698219 tgaagttaacactataacatcaaaaatgttgtgagtaacacccca 33698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 622
Target Start/End: Original strand, 17167715 - 17167838
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||| |||||| |||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17167814  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    ||||||||| | ||||| ||||||    
T  17167815 tcaaaagttcattctccatagtat 17167838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 499 - 622
Target Start/End: Original strand, 17173292 - 17173415
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||| |||||| |||||||| || |||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaatgttgtgagtaacaccccactgtttgtacaatgaca 17173391  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    ||||||||| | ||||| ||||||    
T  17173392 tcaaaagttcaatctccatagtat 17173415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 497 - 602
Target Start/End: Original strand, 4205116 - 4205221
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| |||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  4205116 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaacactataatatcaaaaatgttctgaataacaccccactgtttgtacaatga 4205215  T
Q  597 catcaa 602  Q
    ||||||    
T  4205216 catcaa 4205221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 499 - 608
Target Start/End: Original strand, 27396618 - 27396727
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| || | |||||||| || ||||||||||||||||| || |||| |||| |||||||||||| ||| ||||||||||||||    
T  27396618 aaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacattatagcattaaaagtgttatgagtaacaccctactgtttgtacaatgaca 27396717  T
Q  599 tcaaaagttt 608  Q
    ||||||||||    
T  27396718 tcaaaagttt 27396727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 498 - 607
Target Start/End: Original strand, 37775670 - 37775779
Alignment:
Q  498 gaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgac 597  Q
    ||||||||||| | |||||||  ||| ||| ||||||| |||||||| || |||| ||| |||||||||||||||||||||||||| |||||||| || |    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagttagcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagtggc 37775769  T
Q  598 atcaaaagtt 607  Q
    ||||||||||    
T  37775770 atcaaaagtt 37775779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 495 - 622
Target Start/End: Original strand, 49375964 - 49376092
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttt-tgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 593  Q
    |||||||||||||| | ||||||| || | ||||||||| || ||||||||||||||||| || |||| ||| |||||||||||||||||  |||||||     
T  49375964 atggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacattatagcatcaaaagtgtcgtgagtaacaccccactgcttgtacag 49376063  T
Q  594 tgacatcaaaagtttagtctccgtagtat 622  Q
    || ||||||||||| ||||| | ||||||    
T  49376064 tggcatcaaaagttcagtcttcatagtat 49376092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 9139247 - 9139355
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||||||||||||||| |||||||||| |||||| ||||||||  | ||||||||||||||||  |||||||| |||    
T  9139247 ggaaaattctatggtgaagtcatgaaattgacttttttggtgaagttaacgttatagcataaaaaa--tagtgagtaacaccccaccgtttgtacagtga 9139344  T
Q  597 catcaaaagtt 607  Q
    ||| |||||||    
T  9139345 cataaaaagtt 9139355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 497 - 622
Target Start/End: Complemental strand, 35021246 - 35021121
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||||||||  || |||||||| ||||||||||| ||||| |||||||| ||     
T  35021246 ggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaacattataacatcaaaaatgtagtgagtaacacaccactgtttgtacattgg 35021147  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    | |||||||||| |||  ||||||||    
T  35021146 cgtcaaaagtttcgtcctcgtagtat 35021121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 34361702 - 34361592
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||| ||||  |||||||||||  |||||||||||||||| |||||| |||||    
T  34361702 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacataaaaaatgtaatgagtaacaccccactgtttgtagaatga 34361603  T
Q  597 catcaaaagtt 607  Q
    ||| |||||||    
T  34361602 cattaaaagtt 34361592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 613
Target Start/End: Original strand, 39397916 - 39398034
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | |||||||  | | |||||||| || ||||||||||| ||||  || |||| ||||||||||||||||||| | |||||||| |    
T  39397916 atggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaacactataacattaaaagtgttgtgagtaacaccccattgtttgtacagt 39398015  T
Q  595 gacatcaaaagtttagtct 613  Q
    ||||||||||||| |||||    
T  39398016 gacatcaaaagttcagtct 39398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 614
Target Start/End: Complemental strand, 54499422 - 54499332
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtac-aatgacatcaaaagtttagtctc 614  Q
    |||||||| || ||||||||||| ||||| || |||| ||||||||||||||||||||  ||||||| |||||||||||||||| ||||||    
T  54499422 tgacttttctggtgaagttaacactatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcagtctc 54499332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 527 - 612
Target Start/End: Complemental strand, 19089634 - 19089549
Alignment:
Q  527 acttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||| ||||||||||| |||| ||| |||| |||  |||||||||||||||| |||||| |||||||||||||||| ||||    
T  19089634 acttttttgatgaagttaacactataatatcaaaattgtaatgagtaacaccccactgtttgtataatgacatcaaaagttcagtc 19089549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 525 - 622
Target Start/End: Original strand, 32592121 - 32592218
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||||||||| || ||||| |||| ||||| ||||||||| ||||| |||||| | |||||||||||||| |||| || ||||||    
T  32592121 tgacttttttgatgaagttaacactacagtatcaaaagtgttgagagtaacactccactgtttgtatagtgacatcaaaagttcagtccccttagtat 32592218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 25701253 - 25701153
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| || | ||||||||||| | ||||||||||||||  || |||| ||| ||||||||||||| ||| |||||||| |||||||||||||| |||    
T  25701253 gaagtcatgataatgacttttttggtaaagttaacattataacatcaaaagtgtagtgagtaacaccctactgtttgtacagtgacatcaaaagttcagt 25701154  T
Q  612 c 612  Q
    |    
T  25701153 c 25701153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 499 - 622
Target Start/End: Complemental strand, 36493897 - 36493774
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| |||| | ||||||||| ||||||||| | ||||  || |||||| | ||||||||||||||| | |||||||| |||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaatactataccatcaaaaatatagtgagtaacaccccattgtttgtacagtgaca 36493798  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    ||||||||| |||| || ||||||    
T  36493797 tcaaaagttcagtccccatagtat 36493774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 495 - 622
Target Start/End: Complemental strand, 55241317 - 55241190
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | ||||||| || | |||||||| |  ||||||||| | |||| ||| |||| ||||| ||||||||||||||| |||||||| |    
T  55241317 atggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaatactatattatcaaaattgttgcgagtaacaccccactgtttgtacagt 55241218  T
Q  595 gacatcaaaagtttagtctccgtagtat 622  Q
    | ||||||||||| |||| || ||||||    
T  55241217 ggcatcaaaagttcagtccccatagtat 55241190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 512 - 622
Target Start/End: Complemental strand, 30002820 - 30002710
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||  ||| ||| |||| || ||||||||||| | ||| || |||| |||||||||||||||| |||| |||||||| |||||||||||||| |||    
T  30002820 gaagtcattaaaatgatttttctggtgaagttaacactgtagcatcaaaagtgttgtgagtaacacctcactgtttgtacagtgacatcaaaagttcagt 30002721  T
Q  612 ctccgtagtat 622  Q
    || | ||||||    
T  30002720 cttcttagtat 30002710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 525 - 622
Target Start/End: Original strand, 7703545 - 7703642
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||||||| || ||||||||||| ||||  || |||| |||||| |||||||||||||| |||||||  |||||||||||||| |||| || ||||||    
T  7703545 tgacttttctggtgaagttaacactataacatcaaaagtgttgtcagtaacaccccactgtttgtacggtgacatcaaaagttcagtccccatagtat 7703642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 25184113 - 25184223
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | ||||| ||||| ||||||||||| ||||  || ||||||||  |||||||||| | ||| ||||||||||||    
T  25184113 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaacactataacatcaaaaatgtaatgagtaacactctactgtttgtacaatga 25184212  T
Q  597 catcaaaagtt 607  Q
    |||| ||||||    
T  25184213 catccaaagtt 25184223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 32912791 - 32912681
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  | | ||||||||||| ||||||||||| ||||  || ||||||||  |||||||||||| | |||||||| |||||    
T  32912791 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacactataacatcaaaaatgtaatgagtaacaccctagtatttgtagaatga 32912692  T
Q  597 catcaaaagtt 607  Q
     ||||||||||    
T  32912691 tatcaaaagtt 32912681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 37287766 - 37287844
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| | ||||||||| ||||  || |||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  37287766 ttttttggtaaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagtt 37287844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 622
Target Start/End: Complemental strand, 879727 - 879634
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||| |||||| |||| ||||  || ||||||||  ||||||||||| || | ||||||||||||||||||||||||| ||| | ||||||    
T  879727 ttttttggtgaagtaaacactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatgacatcaaaagtttaatcttcatagtat 879634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 612
Target Start/End: Original strand, 47253751 - 47253863
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | ||||||| || | ||||||||||| ||||||||||| ||||  || |||| |||||||||||||| |||| | ||| |||| |||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactatatcatcaaaagtgttgtgagtaaca-cccattgtttatacagtgaca 47253849  T
Q  599 tcaaaagtttagtc 612  Q
    ||||||||| ||||    
T  47253850 tcaaaagttcagtc 47253863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 34948293 - 34948193
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| || | |||||||| ||  |||||||||| ||||  || |||| ||||||||||||||||||||| |||||| | || ||||||||||| |||    
T  34948293 gaagtcatgagaatgacttttctggcgaagttaacactataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtggcatcaaaagttcagt 34948194  T
Q  612 c 612  Q
    |    
T  34948193 c 34948193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 568 - 612
Target Start/End: Complemental strand, 37663881 - 37663837
Alignment:
Q  568 tgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||    
T  37663881 tgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 37663837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 49340278 - 49340198
Alignment:
Q  19 taccttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttc 99  Q
    ||||||||||| ||||||||||||||||||||  | |||||| ||||| |||||||| |  |||||||| || ||||||||    
T  49340278 taccttccttctgatgctaccagaagtgttgatgacgtgctttcgcaaggcctcacattcgaaatcatctataacatcttc 49340198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 4598021 - 4598107
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||| || ||||||||||| ||||  || |||  ||||||||||||||||||||| |||||||| || ||||||||||| ||||    
T  4598021 tgacttttctggtgaagttaacactataacatcaaag-tgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttcagtc 4598107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 539 - 622
Target Start/End: Original strand, 23761114 - 23761197
Alignment:
Q  539 aagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||| ||||  || |||| |||||||||||||||| |||| |||||| | |||||||||||||| |||| || ||||||    
T  23761114 aagttaacactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcagtccccatagtat 23761197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 622
Target Start/End: Complemental strand, 29584381 - 29584286
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||||||| || ||||||||||| ||||  || |||| |||||  ||||||||| |||| ||||||||||| ||||||||||| ||||| | ||||||    
T  29584381 tgacttttctggtgaagttaacactataacatcaaaagtgttg--agtaacacctcactgtttgtacaatggcatcaaaagttcagtcttcatagtat 29584286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 622
Target Start/End: Complemental strand, 35025784 - 35025674
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| |||| ||| |||| || |||||| |||| ||||| || |||| ||| ||||||| ||||||||| ||| |||  |||||||||||||| |||    
T  35025784 gaagtcatgaaaatgatttttctggtgaagtcaacactatagcatcaaaagtgtagtgagtagcaccccactgtttatacgttgacatcaaaagttcagt 35025685  T
Q  612 ctccgtagtat 622  Q
    |  ||||||||    
T  35025684 cctcgtagtat 35025674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 50697242 - 50697352
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||| | |||||||  ||| ||| ||||||  |||||| |||| ||||  ||||||||| |   ||||||||||| ||  ||||||||||||    
T  50697242 ggaaaattctacggtgaagtcataaaaatgatttttttagtgaagtaaacactataacataaaaaatataacgagtaacaccctaccgtttgtacaatga 50697341  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  50697342 catcaaaagtt 50697352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 497 - 582
Target Start/End: Original strand, 4396326 - 4396411
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac 582  Q
    |||||||||||  | |||||||  ||| ||||||||||  ||||||||||| ||||  |||||||||||  |||||||||||||||    
T  4396326 ggaaaattctatagtgaagtcataaaaatgacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacaccccac 4396411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 612
Target Start/End: Complemental strand, 28003199 - 28003082
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||||||  | ||||||| || | |||||||| || |||||| |||| ||||| || |||| ||| || ||||  || ||||| |||||||| |    
T  28003199 atggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaacactatagcatcaaaagtgtagtcagtagtactccactgtttgtacagt 28003100  T
Q  595 gacatcaaaagtttagtc 612  Q
    ||||||||||||| ||||    
T  28003099 gacatcaaaagttcagtc 28003082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 558 - 607
Target Start/End: Original strand, 50764791 - 50764840
Alignment:
Q  558 aaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    |||| ||||||||||||||||||||| |||||||  ||||||||||||||    
T  50764791 aaaagtgttgtgagtaacaccccactgtttgtacggtgacatcaaaagtt 50764840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 612
Target Start/End: Complemental strand, 19440864 - 19440744
Alignment:
Q  493 atatggaaaattctactgggaa-gtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtac 591  Q
    |||||||||||||||  | ||| |||| || | ||||||||||| ||| ||||||| ||||  || ||||||||  ||| |||||| ||||  |||||||    
T  19440864 atatggaaaattctatggtgaaagtcatgagaatgacttttttggtgatgttaacactataacatcaaaaatgtaatgattaacactccaccgtttgtac 19440765  T
Q  592 aatgacatcaaaagtttagtc 612  Q
    |||| ||||||||||| ||||    
T  19440764 aatggcatcaaaagttcagtc 19440744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 612
Target Start/End: Complemental strand, 46888353 - 46888253
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| |||| | |||||| || ||||||||| | ||||  || |||| ||| |||||||| |||||||||||||||||  | ||||||||||| |||    
T  46888353 gaagtcaagaaaataacttttctgatgaagttaatactataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagttcagt 46888254  T
Q  612 c 612  Q
    |    
T  46888253 c 46888253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 49351642 - 49351562
Alignment:
Q  19 taccttccttccgatgctaccagaagtgttgactatgtgcttccgcaatgcctcacactgaaaatcatcgattacatcttc 99  Q
    ||||||||||| ||||||||| ||||||||||  | |||||| ||||| |||||||| |  |||||||| || ||||||||    
T  49351642 taccttccttctgatgctacctgaagtgttgatgacgtgctttcgcaaggcctcacattcgaaatcatctataacatcttc 49351562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 604
Target Start/End: Original strand, 3042611 - 3042718
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||| |||  ||| ||| ||||||| ||||||||||| ||||  ||| |||||||  ||||||| |||||||  ||| ||||||||    
T  3042611 ggaaaattctatggtgaaatcataaaaatgatttttttggtgaagttaacactataacatacaaaatgtaatgagtaataccccaccgtttatacaatga 3042710  T
Q  597 catcaaaa 604  Q
    ||||||||    
T  3042711 catcaaaa 3042718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 55478106 - 55477987
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccac----tatttgtaca 592  Q
    |||||||||||  | ||||||| || | ||| ||||||| ||||||||||| ||||  || ||||||||   ||||||||| ||||    | ||||||||    
T  55478106 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacactccactgtttgtttgtaca 55478007  T
Q  593 atgacatcaaaagtttagtc 612  Q
    ||||||||||||||| ||||    
T  55478006 atgacatcaaaagttcagtc 55477987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 607
Target Start/End: Complemental strand, 4934360 - 4934303
Alignment:
Q  551 tagtataaaaaatgttgtgagtaaca-ccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||||||| |||||||||| ||||| | |||||||| || |||||||||||    
T  4934360 tagtataaaaaatgtagtgagtaacacccccattgtttgtacactggcatcaaaagtt 4934303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 537 - 622
Target Start/End: Complemental strand, 33816704 - 33816619
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    |||||| |||||| ||| || |||| ||| ||||||| |||| |||||||| |||  || ||||||||||| ||||||| ||||||    
T  33816704 tgaagtcaacattgtagcatcaaaagtgtagtgagtagcacctcactatttatacggtggcatcaaaagttcagtctccatagtat 33816619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 5e-30; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 134 - 249
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||||||| |||||||| || ||||||||||| | ||||||||||||||||||||||||||| ||||| |||||||||||     
T  134 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacactgtagtataaaaaatgttgtgagtaacactccactgtttgtacaatgg 233  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  234 catcaaaagttcagtc 249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 608
Target Start/End: Complemental strand, 94545 - 94457
Alignment:
Q  520 gaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagttt 608  Q
    |||| |||||||| || ||||||||||||||||  || |||| ||| ||||||||||||||||| |||||||| || ||||||||||||    
T  94545 gaaaatgacttttctgatgaagttaacattataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagttt 94457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 1e-27; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 499 - 622
Target Start/End: Complemental strand, 238690 - 238568
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||  | |||||||||||| | ||||||||| ||||||||||| |||||||| |||||||||||||||||||  ||||| ||||||||||||||    
T  238690 aaaattctatagtgaagtcacgaaaataacttttttggtgaagttaacactatagtattaaaaatgttgtgagtaaca-tccactgtttgtacaatgaca 238592  T
Q  599 tcaaaagtttagtctccgtagtat 622  Q
    ||||||||| |||| || ||||||    
T  238591 tcaaaagttcagtccccatagtat 238568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 494 - 612
Target Start/End: Original strand, 15752022 - 15752140
Alignment:
Q  494 tatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaa 593  Q
    |||| |||||||||  | ||||||| || | ||||||||||| ||||||||||| ||||  ||||||||| | |||||||||||| |||| |||||||||    
T  15752022 tatgaaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactataacataaaaaatatagtgagtaacacctcactgtttgtacaa 15752121  T
Q  594 tgacatcaaaagtttagtc 612  Q
    || ||||||||||| ||||    
T  15752122 tggcatcaaaagttcagtc 15752140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 47279200 - 47279300
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    ||||||| || | ||| ||||||| |||||||||||||||| ||| |||| ||||||||||||||||||||| |||||||| || |||| |||||| |||    
T  47279200 gaagtcatgagaatgatttttttggtgaagttaacattatactatcaaaagtgttgtgagtaacaccccactgtttgtacagtggcatcgaaagttcagt 47279299  T
Q  612 c 612  Q
    |    
T  47279300 c 47279300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 525 - 612
Target Start/End: Complemental strand, 11742502 - 11742415
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||| || ||||||||||| |||| ||| |||| |||||| |||||||||||||| |||||||| |||||||||||||| ||||    
T  11742502 tgacttttctggtgaagttaacactatattatcaaaagtgttgtaagtaacaccccactgtttgtacagtgacatcaaaagttcagtc 11742415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 496 - 607
Target Start/End: Original strand, 38823209 - 38823320
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | ||||||| || | |||||||| || | ||||||||| ||||| || |||| ||||| |||||||||||||||||||||||| ||    
T  38823209 tggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaacactatagcatcaaaattgttgcgagtaacaccccactatttgtacagtg 38823308  T
Q  596 acatcaaaagtt 607  Q
     |||||||||||    
T  38823309 tcatcaaaagtt 38823320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 1547283 - 1547393
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||  ||||||||||||||||||||||| ||||| ||||| || ||     
T  1547283 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaacactataacataaaaaatgttgtgagtaacactccactgtttgtgcagtgg 1547382  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  1547383 catcaaaagtt 1547393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 10922755 - 10922833
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| ||||||||||| ||||  |||||||||||  ||||||| |||||||| |||||||||||||||||||||||    
T  10922755 ttttttggtgaagttaacactataacataaaaaatgtaatgagtaagaccccactgtttgtacaatgacatcaaaagtt 10922833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 525 - 607
Target Start/End: Original strand, 32267058 - 32267140
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||  ||||||||||| ||||  || ||||||||  |||||||||||||||| |||||||||||||||||||||||    
T  32267058 tgactttttttgtgaagttaacaatataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagtt 32267140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 493 - 607
Target Start/End: Original strand, 42721031 - 42721145
Alignment:
Q  493 atatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtaca 592  Q
    |||||||||||||||  | ||||||| |||| ||| ||||||| |||||||| |  ||||  ||||||||| | ||||||||||||||||| ||||||||    
T  42721031 atatggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttagccctatatcataaaaaatatagtgagtaacaccccactgtttgtaca 42721130  T
Q  593 atgacatcaaaagtt 607  Q
     | ||||||||||||    
T  42721131 gtaacatcaaaagtt 42721145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 537 - 622
Target Start/End: Original strand, 48620673 - 48620758
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||  || |||| ||||||||||||||||||||| |||||||| |||||||||||||| |||| || ||||||    
T  48620673 tgaagttaacaatataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagttcagtccccttagtat 48620758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 2959744 - 2959859
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| |||||||| || ||||||||||| ||||  || |||| ||| || ||||||| |||||| |||||||| |||    
T  2959744 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaacactataacatcaaaactgtagtaagtaacatcccactgtttgtacagtga 2959843  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  2959844 catcaaaagttcagtc 2959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 520 - 607
Target Start/End: Complemental strand, 9903211 - 9903124
Alignment:
Q  520 gaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    |||| ||||||||||| ||||||||||| ||||  || |||| ||| |||||||||||||| || |||||||| ||||||||||||||    
T  9903211 gaaaatgacttttttgatgaagttaacactataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagtt 9903124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 497 - 612
Target Start/End: Original strand, 18422647 - 18422762
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  ||| ||||||||||| ||||||||||| ||||  || |||||| |   ||||||||||||||  ||||||||||||    
T  18422647 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaacactataacatcaaaaatataacgagtaacaccccaccgtttgtacaatga 18422746  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  18422747 catcaaaagttcagtc 18422762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 51128884 - 51128970
Alignment:
Q  526 gacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||||  ||||||||||| ||||  |||||||||||  |||||||||| ||||  ||||||||||||||||||||||| ||||    
T  51128884 gacttttttagtgaagttaacactataacataaaaaatgtaatgagtaacactccaccgtttgtacaatgacatcaaaagttcagtc 51128970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 495 - 622
Target Start/End: Complemental strand, 27267378 - 27267254
Alignment:
Q  495 atggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaat 594  Q
    |||||||||| || || ||||||| || | ||| ||||||| ||||||||||| ||  | ||||||||||| |||||| |||||||||| |||||||| |    
T  27267378 atggaaaattata-tgtgaagtcatgagaatgatttttttggtgaagttaacacta--gcataaaaaatgtagtgagtgacaccccactgtttgtacagt 27267282  T
Q  595 gacatcaaaagtttagtctccgtagtat 622  Q
    | ||| ||||||| ||||||| ||||||    
T  27267281 ggcattaaaagttcagtctccatagtat 27267254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 612
Target Start/End: Complemental strand, 28564938 - 28564846
Alignment:
Q  520 gaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||| ||| ||||||| ||||||||||| ||||  || ||||||||  |||||||||||  ||| ||||||||||||||||||||||| ||||    
T  28564938 gaaaatgatttttttgatgaagttaacactataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaagttcagtc 28564846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 525 - 584
Target Start/End: Complemental strand, 7079226 - 7079167
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccacta 584  Q
    ||||||||||| ||||||||||| |||| ||| |||| ||||||||||||||||||||||    
T  7079226 tgacttttttggtgaagttaacactataatatcaaaagtgttgtgagtaacaccccacta 7079167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 10182188 - 10182073
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| ||||||||||| ||||||||| | | ||  ||||||||| | ||| ||||||| ||||| |||||||| ||     
T  10182188 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaactgtaacataaaaaatatagtgcgtaacacgccactgtttgtacagtgg 10182089  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  10182088 catcaaaagttcagtc 10182073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 30254448 - 30254534
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||||||||||||||||| ||||  || ||||||||  ||||||| | | |||| ||||||||||||||||||||||| ||||    
T  30254448 tgacttttttgttgaagttaacaatataacatcaaaaatgtaatgagtaata-cacactgtttgtacaatgacatcaaaagttcagtc 30254534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 529 - 607
Target Start/End: Original strand, 23999375 - 23999453
Alignment:
Q  529 ttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| ||||||||||| || |  ||||||||| |   |||||||||||||||||||||| ||||||||||||||||    
T  23999375 ttttttggtgaagttaacactacaacataaaaaatataacgagtaacaccccactatttgtagaatgacatcaaaagtt 23999453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 497 - 622
Target Start/End: Original strand, 15382929 - 15383054
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||| |  ||| ||||||||||| |||| |||||| ||||  || ||||||||  ||||||||| |||||  |||||||||||     
T  15382929 ggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaacactataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaatgt 15383028  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||  ||||||||    
T  15383029 catcaaaagttcagtcatcgtagtat 15383054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 555 - 612
Target Start/End: Original strand, 21289726 - 21289783
Alignment:
Q  555 ataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||||| ||||||||||||||||| |||||||| || ||||||||||| ||||    
T  21289726 ataaaaaatgtagtgagtaacaccccactgtttgtacagtggcatcaaaagttcagtc 21289783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 537 - 622
Target Start/End: Original strand, 32216091 - 32216176
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtat 622  Q
    ||||||||||| ||||  || |||||||| ||||||||||| ||||| ||||||||||| | ||||||||| ||||  ||||||||    
T  32216091 tgaagttaacactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcagtcctcgtagtat 32216176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 512 - 612
Target Start/End: Original strand, 37451297 - 37451397
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagt 611  Q
    |||||||  ||| ||||||||||| | ||||||||| ||||  || ||||||||  | |||||||||| ||  ||||||||||||||||||||||| |||    
T  37451297 gaagtcataaaaatgacttttttggtaaagttaacactataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaagttcagt 37451396  T
Q  612 c 612  Q
    |    
T  37451397 c 37451397  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 27533132 - 27533050
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtt 607  Q
    |||||||| || ||||||||||| ||||| || |||| | ||||| |||||| |||||| |||||||| || |||||||||||    
T  27533132 tgacttttctggtgaagttaacactatagcatcaaaagtattgtgggtaacaacccactctttgtacagtggcatcaaaagtt 27533050  T

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Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 537 - 626
Target Start/End: Original strand, 3534968 - 3535057
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtctccgtagtattatc 626  Q
    ||||||||||| ||||  || |||| ||||||||||||||||  ||| ||||| || |||||||||||||| |||| || || |||||||    
T  3534968 tgaagttaacactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcagtccccttaatattatc 3535057  T

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Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 37619048 - 37618964
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaa--caccccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||||||| ||||||||||| ||||  || |||||| |  |||||||  ||||||||| |||||| ||||||||||||||||    
T  37619048 tgacttttttggtgaagttaacactataacatcaaaaatttaatgagtaaaacaccccactgtttgtaaaatgacatcaaaagtt 37618964  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 497 - 622
Target Start/End: Original strand, 39393379 - 39393504
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||| | ||||| | || | |||||||| |  ||||||||||| ||||| || |||| |||||||||||| ||  || | |||||||| ||     
T  39393379 ggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaacactatagcatcaaaagtgttgtgagtaatacttcattgtttgtacagtgg 39393478  T
Q  597 catcaaaagtttagtctccgtagtat 622  Q
    ||||||||||||| || || ||||||    
T  39393479 catcaaaagtttaatccccatagtat 39393504  T

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Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 607
Target Start/End: Complemental strand, 47682658 - 47682564
Alignment:
Q  512 gaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacac-cccactatttgtacaatgacatcaaaagtt 607  Q
    ||||||| || | ||||||||||| ||||||||||| ||  | ||||||||||||||||||||||| ||||||  ||||||| ||  ||||||||||    
T  47682658 gaagtcatgagagtgacttttttggtgaagttaacacta--gcataaaaaatgttgtgagtaacactcccactgcttgtacagtggtatcaaaagtt 47682564  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 488 - 607
Target Start/End: Original strand, 3309135 - 3309253
Alignment:
Q  488 tttaaatatggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactattt 587  Q
    |||||| |||||||||||||  |  |||||| || | |||||||| || | ||||||||| ||||  || |||| |||||||||||||| |||||| |||    
T  3309135 tttaaaaatggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaacactataacatcaaaagtgttgtgagtaaca-cccactgttt 3309233  T
Q  588 gtacaatgacatcaaaagtt 607  Q
    ||||| ||  ||||||||||    
T  3309234 gtacagtggtatcaaaagtt 3309253  T

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Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 607
Target Start/End: Original strand, 16415641 - 16415752
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccc-cactatttgtacaatg 595  Q
    |||||||||||  | ||||||| || | |||||||| || ||||||||||| ||||| || |||| ||| |||||||||||||  | | |||||||| ||    
T  16415641 ggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaacactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtacagtg 16415740  T
Q  596 acatcaaaagtt 607  Q
     |||||||||||    
T  16415741 gcatcaaaagtt 16415752  T

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Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 612
Target Start/End: Complemental strand, 34012557 - 34012442
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | ||||||| |||| |||| ||| || ||||||||||| ||||  || || | ||| ||||||||||| ||||| |||||| | ||     
T  34012557 ggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaacactataacatcaacactgtagtgagtaacactccactgtttgtaaagtgg 34012458  T
Q  597 catcaaaagtttagtc 612  Q
    ||||||||||| ||||    
T  34012457 catcaaaagttcagtc 34012442  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 497 - 607
Target Start/End: Complemental strand, 19899949 - 19899839
Alignment:
Q  497 ggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatga 596  Q
    |||||||||||  | |||||||  | | ||| ||||||| ||||||||||| ||||  || ||||||||   |||||||||| |||| |||||| ||||     
T  19899949 ggaaaattctatggtgaagtcataataatgatttttttggtgaagttaacactataacatcaaaaatgtaacgagtaacacctcactgtttgtagaatgg 19899850  T
Q  597 catcaaaagtt 607  Q
    |||||||||||    
T  19899849 catcaaaagtt 19899839  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 612
Target Start/End: Complemental strand, 30327133 - 30327017
Alignment:
Q  496 tggaaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatg 595  Q
    ||||||||||||  | |||||||  ||| ||||||||||  |||| |||||| ||||  || ||||||||  ||||||| |||| ||  ||||||||||     
T  30327133 tggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaacactataacatcaaaaatgtaatgagtaatacccaaccgtttgtacaata 30327034  T
Q  596 acatcaaaagtttagtc 612  Q
     ||||||||||| ||||    
T  30327033 gcatcaaaagttcagtc 30327017  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 35157068 - 35157004
Alignment:
Q  126 ccattcacgaagctcgtgattctgcttctgctttagctcagcatccaacagcacagctttgatga 190  Q
    ||||||||||||||| || || || | |||||||  ||||||||||| |||||| ||||||||||    
T  35157068 ccattcacgaagctcctggttttgatgctgctttttctcagcatccagcagcactgctttgatga 35157004  T

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Target: scaffold0022 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 607
Target Start/End: Complemental strand, 146199 - 146091
Alignment:
Q  499 aaaattctactgggaagtcacgaaattgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgaca 598  Q
    |||||||||| | |||||||  | | ||| ||||||| | ||||||||||||||  |||||||||||  |||||||||||||| |||||||| |||||||    
T  146199 aaaattctacggtgaagtcataagaatgatttttttggttaagttaacattataacataaaaaatgtaatgagtaacaccccattatttgtagaatgaca 146100  T
Q  599 tcaaaagtt 607  Q
    |||||||||    
T  146099 tcaaaagtt 146091  T

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Target: scaffold0291 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 525 - 612
Target Start/End: Original strand, 7915 - 8002
Alignment:
Q  525 tgacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    ||||||||||| ||||||||||| ||||  || |||| |||  |||||||||||||||| ||||||||||||||||||||||| ||||    
T  7915 tgacttttttgatgaagttaacactataacatcaaaattgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtc 8002  T

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Target: scaffold0061 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 612
Target Start/End: Original strand, 43986 - 44072
Alignment:
Q  526 gacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||||| ||||||||||  |||| ||| ||||||||  |||||||||||||  | ||||||||||| ||| ||||||| ||||    
T  43986 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggcataaaaagttcagtc 44072  T

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Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 612
Target Start/End: Complemental strand, 154801 - 154715
Alignment:
Q  526 gacttttttgttgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttgtacaatgacatcaaaagtttagtc 612  Q
    |||||||||| ||||||||||  |||| ||| ||||||||  |||||||||||||  | ||||||||||| ||| ||||||| ||||    
T  154801 gacttttttggtgaagttaacgctataatatcaaaaatgtaatgagtaacaccccgttgtttgtacaatggcataaaaagttcagtc 154715  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 588
Target Start/End: Original strand, 42388 - 42439
Alignment:
Q  537 tgaagttaacattatagtataaaaaatgttgtgagtaacaccccactatttg 588  Q
    ||||||||||| ||||  || |||| ||||||||||||||||||||||||||    
T  42388 tgaagttaacactataacatcaaaagtgttgtgagtaacaccccactatttg 42439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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