View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8100_high_35 (Length: 242)
Name: NF8100_high_35
Description: NF8100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8100_high_35 |
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Alignment Details
Target: chr5 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 17 - 215
Target Start/End: Complemental strand, 613659 - 613467
Alignment:
| Q |
17 |
tacatcatacattgaaaaactttgaagtatatgggtagggtggttcattacatttacatggggtataggttgccaatttagtctgcttttaattttctta |
116 |
Q |
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| T |
613659 |
tacatcatacattgaaaaactttgaagtatatggatagggtggttcattacat------ggggtataggttgccaatttagtctgcttttaattttctta |
613566 |
T |
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| Q |
117 |
tgaagtaagagaatgagaaagatcaatcgaccaaagatgaggcattaacctttactatctaaaaaacttgtttaagattcattggttaagcttagacga |
215 |
Q |
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| T |
613565 |
tgaagtaagagaatgagaaagatcaatcgaccaaagatgaggcattaacctttactatctaaaaaacttgtttaagattcattggttaagcttagacga |
613467 |
T |
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