View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8100_low_15 (Length: 416)

Name: NF8100_low_15
Description: NF8100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8100_low_15
NF8100_low_15
[»] chr5 (23 HSPs)
chr5 (13-398)||(38185158-38185540)
chr5 (13-398)||(38212817-38213199)
chr5 (13-265)||(38183177-38183431)
chr5 (13-265)||(38214926-38215180)
chr5 (13-234)||(38182849-38183072)
chr5 (13-234)||(38188059-38188282)
chr5 (13-234)||(38210075-38210298)
chr5 (21-251)||(38443096-38443328)
chr5 (13-234)||(38169528-38169751)
chr5 (13-234)||(38215285-38215507)
chr5 (20-208)||(38453166-38453352)
chr5 (30-234)||(38197370-38197576)
chr5 (273-317)||(38169440-38169484)
chr5 (273-317)||(38197620-38197664)
chr5 (273-317)||(38453450-38453494)
chr5 (43-101)||(28382787-28382845)
chr5 (302-342)||(38169319-38169359)
chr5 (302-342)||(38197745-38197785)
chr5 (302-342)||(38453570-38453610)
chr5 (273-310)||(38187978-38188015)
chr5 (273-310)||(38210342-38210379)
chr5 (302-342)||(38187912-38187952)
chr5 (302-342)||(38210405-38210445)


Alignment Details
Target: chr5 (Bit Score: 333; Significance: 0; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 13 - 398
Target Start/End: Complemental strand, 38185540 - 38185158
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38185540 atgaacgtggaaagctttgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 38185441  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtaccgag--t 210  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |    
T  38185440 catgaagagaagtaagcctaggttggatttttgcaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtactgagagt 38185341  T
Q  211 gaaaataggattcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtgacgtgtactgtgagcagtccaatatttataagtatttgattaactg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||     | ||||||||||||||||||||||||||||| ||||||||    
T  38185340 gaaaataggattcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtga-----attgtgagcagtccaatatttataagtatttaattaactg 38185246  T
Q  311 aatttcccaaaaactaggagaattagagagaacttatcctatattaatcaaactaatgattcacgtaaggcaattaatatagtgatct 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38185245 aatttcccaaaaactaggagaattagagagaacttatcctatattaatgaaactaatgattcacgtaaggcaattaatatagtgatct 38185158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 333; E-Value: 0
Query Start/End: Original strand, 13 - 398
Target Start/End: Original strand, 38212817 - 38213199
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38212817 atgaacgtggaaagctttgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 38212916  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtaccgag--t 210  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |    
T  38212917 catgaagagaagtaagcctaggttggatttttgcaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtactgagagt 38213016  T
Q  211 gaaaataggattcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtgacgtgtactgtgagcagtccaatatttataagtatttgattaactg 310  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||     | ||||||||||||||||||||||||||||| ||||||||    
T  38213017 gaaaataggattcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtga-----attgtgagcagtccaatatttataagtatttaattaactg 38213111  T
Q  311 aatttcccaaaaactaggagaattagagagaacttatcctatattaatcaaactaatgattcacgtaaggcaattaatatagtgatct 398  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38213112 aatttcccaaaaactaggagaattagagagaacttatcctatattaatgaaactaatgattcacgtaaggcaattaatatagtgatct 38213199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 265
Target Start/End: Complemental strand, 38183431 - 38183177
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  38183431 atgaacgtggaaagctttgccatgaggtcaaagaagttgatattacgatcgacgatgatgattttattgtctccaccgatgtaggaataacgacgatgat 38183332  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagt 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||    
T  38183331 catgaagagcagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactgagagt 38183232  T
Q  211 gaaaataggattcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtga 265  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38183231 gaaaagagggttcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtga 38183177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 265
Target Start/End: Original strand, 38214926 - 38215180
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  38214926 atgaacgtggaaagctttgccatgaggtcaaagaagttgatattacgatcgacgatgatgattttattgtctccaccgatgtaggaataacgacgatgat 38215025  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagt 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||    
T  38215026 catgaagagcagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactgagagt 38215125  T
Q  211 gaaaataggattcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtga 265  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  38215126 gaaaagagggttcgagaaaagacgtctgaaacagttgggacgtgtgaatacgtga 38215180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 38182849 - 38183072
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38182849 atgaacgtggaaagctttgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccaccgatgtaggaataacgacgatgat 38182948  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagt 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||    
T  38182949 catgaagagcagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactgagagt 38183048  T
Q  211 gaaaataggattcgagaaaagacg 234  Q
    ||||| ||| ||||||||||||||    
T  38183049 gaaaagagggttcgagaaaagacg 38183072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 38188282 - 38188059
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38188282 atgaacgtggaaagctttgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccaccgatgtaggaataacgacgatgat 38188183  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagt 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||    
T  38188182 catgaagagcagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactgagagt 38188083  T
Q  211 gaaaataggattcgagaaaagacg 234  Q
    ||||| ||| ||||||||||||||    
T  38188082 gaaaagagggttcgagaaaagacg 38188059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 234
Target Start/End: Original strand, 38210075 - 38210298
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38210075 atgaacgtggaaagctttgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccaccgatgtaggaataacgacgatgat 38210174  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagt 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||    
T  38210175 catgaagagcagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactgagagt 38210274  T
Q  211 gaaaataggattcgagaaaagacg 234  Q
    ||||| ||| ||||||||||||||    
T  38210275 gaaaagagggttcgagaaaagacg 38210298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 21 - 251
Target Start/End: Complemental strand, 38443328 - 38443096
Alignment:
Q  21 ggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgatcatgaaga 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  38443328 ggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccaccgatgtaggaataacgacgatgatcatgaaga 38443229  T
Q  121 gaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtaccgag--tgaaaatag 218  Q
    | |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||  |||  |||||| ||    
T  38443228 gcagtaagcctaggttggatttctccaccataagtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtattgagaatgaaaagag 38443129  T
Q  219 gattcgagaaaagacgtctgaaacagttgggac 251  Q
    | ||||||||||||||  |||||| ||||||||    
T  38443128 ggttcgagaaaagacggatgaaactgttgggac 38443096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 38169751 - 38169528
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  38169751 atgaacgtggaaagctttgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccaccgatgtaggaataacgaagatgat 38169652  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagt 210  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||   ||||    
T  38169651 catgaagagcagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgtttagagagggtactgagagt 38169552  T
Q  211 gaaaataggattcgagaaaagacg 234  Q
    | ||| ||| ||||||||||||||    
T  38169551 gtaaagagggttcgagaaaagacg 38169528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 38215507 - 38215285
Alignment:
Q  13 atgaacgtggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgat 112  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38215507 atgaacgtggaaagctttgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccaccgatgtaggaataacgacgatgat 38215408  T
Q  113 catgaagagaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagt 210  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||||    
T  38215407 catgaagagcagtaagcctaggttgga-ttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgttttgagagggtactgagagt 38215309  T
Q  211 gaaaataggattcgagaaaagacg 234  Q
    ||||| ||| ||| ||||||||||    
T  38215308 gaaaagagggttcaagaaaagacg 38215285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 38453166 - 38453352
Alignment:
Q  20 tggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgatcatgaag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38453166 tggaaagctttgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgatcatgaag 38453265  T
Q  120 agaagtaagcctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtaccga 208  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||    
T  38453266 agaagtaagccttggttggatttttccaccataggtaatcatgaacttgactctctccatcgtttgaaa--gttttgagagggtaccga 38453352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 30 - 234
Target Start/End: Original strand, 38197370 - 38197576
Alignment:
Q  30 tgccatgaggtcggagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaataacgacgatgatcatgaagagaagtaagc 129  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||    
T  38197370 tgccatgaggtcagagaagttgatattacgatcgacggtgatgattttattgtctccaccgatgtaggaataacgaagatgatcatgaagagcagtaagc 38197469  T
Q  130 ctaggttggatttttccaccataggtaatcatgagcttgactctctccatagtttgaaagtgttttgagagggtac--cgagtgaaaataggattcgaga 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||   ||||| ||| ||| |||||||    
T  38197470 ctaggttggatttttccaccataggtaatcatgagcttgactctctccatcgtttgaaagtgtttagagagggtactgagagtgtaaagagggttcgaga 38197569  T
Q  228 aaagacg 234  Q
    |||||||    
T  38197570 aaagacg 38197576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 38169484 - 38169440
Alignment:
Q  273 tgtgagcagtccaatatttataagtatttgattaactgaatttcc 317  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  38169484 tgtgagcagttcagtatttataagtatttgattaactgaatttcc 38169440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 38197620 - 38197664
Alignment:
Q  273 tgtgagcagtccaatatttataagtatttgattaactgaatttcc 317  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  38197620 tgtgagcagttcagtatttataagtatttgattaactgaatttcc 38197664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 317
Target Start/End: Original strand, 38453450 - 38453494
Alignment:
Q  273 tgtgagcagtccaatatttataagtatttgattaactgaatttcc 317  Q
    |||||||||| || |||||||||||||||||||||||||||||||    
T  38453450 tgtgagcagttcagtatttataagtatttgattaactgaatttcc 38453494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 28382787 - 28382845
Alignment:
Q  43 gagaagttgatattacgatcgacggtgatgattttattgtctccgccgatgtaggaata 101  Q
    ||||| |||||| ||||||||||||||| ||||||  |||| |||||||||||||||||    
T  28382787 gagaatttgatactacgatcgacggtgaggattttggtgtcaccgccgatgtaggaata 28382845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 38169359 - 38169319
Alignment:
Q  302 gattaactgaatttcccaaaaactaggagaattagagagaa 342  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  38169359 gattaactgaatttcccaaaaactaggggaatcagagagaa 38169319  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 38197745 - 38197785
Alignment:
Q  302 gattaactgaatttcccaaaaactaggagaattagagagaa 342  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  38197745 gattaactgaatttcccaaaaactaggggaatcagagagaa 38197785  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 38453570 - 38453610
Alignment:
Q  302 gattaactgaatttcccaaaaactaggagaattagagagaa 342  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  38453570 gattaactgaatttcccaaaaactaggggaatcagagagaa 38453610  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Complemental strand, 38188015 - 38187978
Alignment:
Q  273 tgtgagcagtccaatatttataagtatttgattaactg 310  Q
    |||||||||| || ||||||||||||||||||||||||    
T  38188015 tgtgagcagttcagtatttataagtatttgattaactg 38187978  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 38210342 - 38210379
Alignment:
Q  273 tgtgagcagtccaatatttataagtatttgattaactg 310  Q
    |||||||||| || ||||||||||||||||||||||||    
T  38210342 tgtgagcagttcagtatttataagtatttgattaactg 38210379  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 38187952 - 38187912
Alignment:
Q  302 gattaactgaatttcccaaaaactaggagaattagagagaa 342  Q
    |||||||||||||||| |||||||||| |||| ||||||||    
T  38187952 gattaactgaatttcctaaaaactaggggaatcagagagaa 38187912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 302 - 342
Target Start/End: Original strand, 38210405 - 38210445
Alignment:
Q  302 gattaactgaatttcccaaaaactaggagaattagagagaa 342  Q
    |||||||||||||||| |||||||||| |||| ||||||||    
T  38210405 gattaactgaatttcctaaaaactaggggaatcagagagaa 38210445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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