View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8100_low_26 (Length: 361)

Name: NF8100_low_26
Description: NF8100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8100_low_26
NF8100_low_26
[»] chr6 (9 HSPs)
chr6 (40-241)||(30847872-30848075)
chr6 (241-346)||(30848142-30848255)
chr6 (15-95)||(16434803-16434882)
chr6 (15-69)||(6714547-6714601)
chr6 (19-82)||(3687636-3687699)
chr6 (11-90)||(6169375-6169454)
chr6 (17-94)||(10388512-10388589)
chr6 (15-90)||(30122833-30122908)
chr6 (19-69)||(35072200-35072250)
[»] chr7 (16 HSPs)
chr7 (15-90)||(35316132-35316207)
chr7 (15-83)||(32047244-32047312)
chr7 (15-94)||(26073433-26073512)
chr7 (15-94)||(26097220-26097299)
chr7 (15-94)||(33190171-33190250)
chr7 (15-94)||(7511079-7511158)
chr7 (15-82)||(25658399-25658466)
chr7 (15-94)||(33189882-33189961)
chr7 (18-94)||(21297713-21297789)
chr7 (17-94)||(47349-47426)
chr7 (21-82)||(36642619-36642680)
chr7 (15-89)||(5964258-5964332)
chr7 (15-69)||(26073168-26073222)
chr7 (15-69)||(26096955-26097009)
chr7 (20-69)||(5964014-5964063)
chr7 (18-94)||(35315842-35315918)
[»] chr2 (5 HSPs)
chr2 (21-94)||(36937504-36937577)
chr2 (15-94)||(26407691-26407770)
chr2 (18-95)||(30786444-30786521)
chr2 (11-94)||(18143994-18144080)
chr2 (15-82)||(29469527-29469594)
[»] chr4 (10 HSPs)
chr4 (15-82)||(51103376-51103443)
chr4 (18-94)||(51103657-51103733)
chr4 (15-94)||(4892673-4892752)
chr4 (14-95)||(4892384-4892465)
chr4 (14-67)||(43049384-43049437)
chr4 (18-94)||(45302323-45302399)
chr4 (18-71)||(22886713-22886766)
chr4 (18-71)||(22938377-22938430)
chr4 (17-69)||(4872571-4872623)
chr4 (26-95)||(35251686-35251755)
[»] chr3 (9 HSPs)
chr3 (15-82)||(36012703-36012770)
chr3 (15-94)||(55213966-55214044)
chr3 (15-69)||(33140566-33140620)
chr3 (15-94)||(46164108-46164187)
chr3 (15-94)||(46163819-46163898)
chr3 (7-76)||(7565759-7565828)
chr3 (11-67)||(12089016-12089072)
chr3 (15-95)||(26121950-26122030)
chr3 (17-69)||(33140301-33140353)
[»] chr8 (10 HSPs)
chr8 (15-95)||(11732592-11732672)
chr8 (14-94)||(41480795-41480875)
chr8 (15-94)||(5074541-5074620)
chr8 (15-94)||(16997093-16997172)
chr8 (15-94)||(42950631-42950710)
chr8 (15-69)||(38225457-38225511)
chr8 (11-69)||(38225718-38225776)
chr8 (17-95)||(42950340-42950418)
chr8 (17-94)||(7905633-7905710)
chr8 (15-60)||(23488875-23488920)
[»] chr5 (4 HSPs)
chr5 (15-95)||(17990742-17990822)
chr5 (15-69)||(8999819-8999873)
chr5 (15-93)||(13932849-13932927)
chr5 (11-83)||(36150743-36150815)
[»] chr1 (6 HSPs)
chr1 (18-94)||(7481035-7481110)
chr1 (15-91)||(49784524-49784600)
chr1 (15-94)||(7481211-7481290)
chr1 (27-94)||(23329296-23329363)
chr1 (18-95)||(20993853-20993930)
chr1 (30-83)||(38208522-38208575)
[»] scaffold0024 (1 HSPs)
scaffold0024 (15-82)||(70852-70919)
[»] scaffold0081 (1 HSPs)
scaffold0081 (18-94)||(8705-8781)


Alignment Details
Target: chr6 (Bit Score: 152; Significance: 2e-80; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 40 - 241
Target Start/End: Original strand, 30847872 - 30848075
Alignment:
Q  40 agagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcggnnnnnnnctatta--acacactctcacaagtaaaaagtgaaag 137  Q
    |||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||       ||||||  ||||||||||||||||||||||||||||    
T  30847872 agagattaagttgaaaatttgatacaaagatatagactaatttgatagtttactcgggaaaaaactattaagacacactctcacaagtaaaaagtgaaag 30847971  T
Q  138 tttgtttcctcaatcatatgacaatgtttttccaacgcattcatttttattagtcaaaatttatatgggtttcgcccaaaattatgtggactcattaatt 237  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  30847972 tttgtttcctcaatcatataacaatgtttttccaacgcattcatttttattagtcaaaatttatatggatttcgcccaaaattatgtggactcattaatt 30848071  T
Q  238 tgac 241  Q
    ||||    
T  30848072 tgac 30848075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 241 - 346
Target Start/End: Original strand, 30848142 - 30848255
Alignment:
Q  241 ctagcattattcatgaaattgtaaagaaaagaaagcattattcaagaaaacat--------atatcgctaaacaatgtcatcttaaacattttaaatgcc 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||    
T  30848142 ctagcattattcatgaaattgtaaagaaaagaaagcattattcaagaaaacatatatcggcatatcgctaaacaatgtcatcttaaacattttaaatgcc 30848241  T
Q  333 ctattctaatttct 346  Q
    ||||||||||||||    
T  30848242 ctattctaatttct 30848255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 16434882 - 16434803
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    |||||||| | |||||||||||||||  || ||| ||||||||||| |||||||| ||||||||||||||| |||||||||    
T  16434882 accatttttagttattaatagagtcat-gaccaatttgagaatttggtacaaagagagagactaatttgatggtttactcg 16434803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 6714547 - 6714601
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||||||||||||||| ||||||||| ||| ||||||||||| ||||||||    
T  6714547 accattttgaattattaataaagtcagagaccaatttgagaatttggtacaaaga 6714601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 3687699 - 3687636
Alignment:
Q  19 ttttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaattt 82  Q
    |||||| ||||||| |||||||  |||||| |||||||||||||||||||| |||||| |||||    
T  3687699 ttttgagttattaacagagtcatggatcaatttgagaatttgatacaaagacagagaccaattt 3687636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 6169454 - 6169375
Alignment:
Q  11 atgaaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagttt 90  Q
    |||||||||||||| ||||||||| |||||  || ||| ||||||||||  || |||||||||||| |||||||| ||||    
T  6169454 atgaaccattttgagttattaataaagtcattgaccaaattgagaatttagtataaagatagagaccaatttgatggttt 6169375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 10388512 - 10388589
Alignment:
Q  17 cattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||| ||||||||||||| ||| | ||| |||||||| || ||||||||  ||||| ||||| |||||||||||    
T  10388512 cattttgatttattaatagagttagaaaccaatttgagaatatggtacaaagacggagaccaatttaatagtttactc 10388589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 30122833 - 30122908
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagttt 90  Q
    |||||||||| ||||||||| ||| || || ||| |||||||||||||||||||| ||  || ||||| |||||||    
T  30122833 accattttgagttattaataaagttagggaccaatttgagaatttgatacaaagacaggaaccaatttaatagttt 30122908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 35072250 - 35072200
Alignment:
Q  19 ttttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||| |||||||||||||||| |||||| |||| |||||| ||||||||    
T  35072250 ttttgatttattaatagagtcagtgatcaaattgaaaatttggtacaaaga 35072200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 35316132 - 35316207
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagttt 90  Q
    |||||||||| |||||||||||||||| || ||| || |||||||| |||||||| ||||||||||||||||||||    
T  35316132 accattttgagttattaatagagtcagggaccaatttaagaatttggtacaaagacagagactaatttgatagttt 35316207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 32047312 - 32047244
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttg 83  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||| ||| ||||||    
T  32047312 accattttgagttattaatagagtcagagaccaatttgagaatttggtacaaagatagggaccaatttg 32047244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 26073433 - 26073512
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||||||||||||||||||||||| || ||| |||| |||||| |||||||| || ||| |||||||| ||||||||    
T  26073433 accattttgaattattaatagagtcagggaccaaattgaaaatttggtacaaagacagtgaccaatttgatggtttactc 26073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 26097220 - 26097299
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||||||||||||||||||||||| || ||| |||| |||||| |||||||| || ||| |||||||| ||||||||    
T  26097220 accattttgaattattaatagagtcagggaccaaattgaaaatttggtacaaagacagtgaccaatttgatggtttactc 26097299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 33190171 - 33190250
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||| ||||| | | || |||| ||||||||||||    
T  33190171 accattttgaattattaatagagtcagggatcaaattgaaaatttgatataaagacataaaccaattcgatagtttactc 33190250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 7511158 - 7511079
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| ||||||| |||||||  || ||| ||||||||||| ||||||||||| ||| |||||||| ||||||||    
T  7511158 accattttgagttattaacagagtcattgaccaatttgagaatttggtacaaagatagggaccaatttgatggtttactc 7511079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 25658466 - 25658399
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaattt 82  Q
    |||||||||| ||||||| |||||||| || ||| ||||||||||| ||||||||||| |||||||||    
T  25658466 accattttgagttattaacagagtcagggaccaatttgagaatttggtacaaagatagggactaattt 25658399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 33189961 - 33189882
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| ||||||||||||||| ||| ||| ||||||| ||| |||||||| |||||| | |||||| ||||||||    
T  33189961 accattttgagttattaatagagtcaaagaccaatttgagaagttggtacaaagacagagaccagtttgatggtttactc 33189882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 21297789 - 21297713
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||| |||||||||||||||||||  || || |||||||| |||||||| || ||| |||||||| ||||||||    
T  21297789 attttgagttattaatagagtcagagactaaattaagaatttggtacaaagacagggaccaatttgatggtttactc 21297713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 47349 - 47426
Alignment:
Q  17 cattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||| |||||||||||| || ||| ||| || | |||||| ||||||||||||||| ||||| ||| |||||||    
T  47349 cattttgagttattaatagagacaaagaccaatttaataatttggtacaaagatagagaccaatttaataatttactc 47426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 36642680 - 36642619
Alignment:
Q  21 ttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaattt 82  Q
    |||| |||||||||||||||| || ||| |||| |||||| ||||||||||||||| |||||    
T  36642680 ttgagttattaatagagtcagggaccaatttgaaaatttggtacaaagatagagaccaattt 36642619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 5964258 - 5964332
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtt 89  Q
    |||||||||| ||||||| |||||| |||| ||| ||||||||||| || |||||||  ||  ||||||||||||    
T  5964258 accattttgagttattaaaagagtcggagaccaaattgagaatttggtataaagatatggatcaatttgatagtt 5964332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 26073222 - 26073168
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||||| ||||||||||||| |||| |||| |||| |||||| ||||||||    
T  26073222 accattttgagttattaatagagttagaggtcaatttgaaaatttggtacaaaga 26073168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 26097009 - 26096955
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||||| ||||||||||||| |||| |||| |||| |||||| ||||||||    
T  26097009 accattttgagttattaatagagttagaggtcaatttgaaaatttggtacaaaga 26096955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 69
Target Start/End: Complemental strand, 5964063 - 5964014
Alignment:
Q  20 tttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    ||||| |||||||||||||||||||  || ||||||||||| ||||||||    
T  5964063 tttgagttattaatagagtcagagactaaattgagaatttggtacaaaga 5964014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 35315918 - 35315842
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||| |||||||||||||||| || | | |||| |||||| |||||||  ||||| ||||||| | ||||||||    
T  35315918 attttgagttattaatagagtcagggaccgaattgacaatttggtacaaaggcagagattaatttggtggtttactc 35315842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 36937577 - 36937504
Alignment:
Q  21 ttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||| ||||||||||||||||||| ||| ||||||||||| ||||||||||| |||||||||| | ||||||||    
T  36937577 ttgagttattaatagagtcagagaccaatttgagaatttggtacaaagatagggactaatttggtggtttactc 36937504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 26407691 - 26407770
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||||||||||||||||||||||| || |||  ||| |||||| |||||||| || |||||| |||||  |||||||    
T  26407691 accattttgaattattaatagagtcagggaccaatatgaaaatttggtacaaagacagggactaaattgatgatttactc 26407770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 30786444 - 30786521
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    ||||||| |||||||||||||||| |||||| |||| | |||| |||||||| | |||  |||||||| |||||||||    
T  30786444 attttgagttattaatagagtcagggatcaatttgaaagtttggtacaaagacaaagatcaatttgatggtttactcg 30786521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 18143994 - 18144080
Alignment:
Q  11 atgaaccattttgaattattaatagagtcagagatcaagttgagaatt---tgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||||||| ||||||||||||||||||| ||| || | ||||   || || ||||| | ||||||||||||| ||||||||    
T  18143994 atgaaccattttgagttattaatagagtcagagaccaatttaaaaatttggtggtaaaaagacaaagactaatttgatggtttactc 18144080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 29469594 - 29469527
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaattt 82  Q
    |||||||||| |||||||||||||||  || ||| ||||||||||| |||||||  |||||| |||||    
T  29469594 accattttgagttattaatagagtcaatgaccaatttgagaatttggtacaaaggcagagaccaattt 29469527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 51103443 - 51103376
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaattt 82  Q
    ||||||||||||||||||||||||||| || ||| ||||||||||| |||||||| |||||| |||||    
T  51103443 accattttgaattattaatagagtcagggaccaatttgagaatttggtacaaagacagagaccaattt 51103376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 51103657 - 51103733
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||| |||||||||||||||| || ||| |||| |||||| ||||||||||| ||| |||||||| ||||||||    
T  51103657 attttgagttattaatagagtcagtgaccaatttgaaaatttggtacaaagatagggaccaatttgatggtttactc 51103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 4892673 - 4892752
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||||||||| | ||||||||| | || ||| ||||||||||| |||||||||||| || |||||||| ||||||||    
T  4892673 accattttgaattgtaaatagagtctgggaccaaattgagaatttggtacaaagatagaaacaaatttgatggtttactc 4892752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 4892465 - 4892384
Alignment:
Q  14 aaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    ||||||||||| |||||||||||||| ||||  || || |||||||| |||||||| |||||| |||||| | |||||||||    
T  4892465 aaccattttgagttattaatagagtcggagactaatttaagaatttggtacaaagacagagaccaatttggtggtttactcg 4892384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 43049384 - 43049437
Alignment:
Q  14 aaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaa 67  Q
    ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||    
T  43049384 aaccattttgaattattaatagactcagagatcaatttaagaatttggtacaaa 43049437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 45302399 - 45302323
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||||||| ||||||||| |||||| || ||||||||||| ||||| || ||  |||||||| ||||||||    
T  45302399 attttgaattattagtagagtcagggatcaaattaagaatttgatataaagagagggatcaatttgatggtttactc 45302323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 22886713 - 22886766
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagata 71  Q
    ||||||||||||||||||||||| ||| ||| || | |||||||||||||||||    
T  22886713 attttgaattattaatagagtcaaagaccaatttaaaaatttgatacaaagata 22886766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 22938377 - 22938430
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagata 71  Q
    ||||||||||||||||||||||| ||| ||| || | |||||||||||||||||    
T  22938377 attttgaattattaatagagtcaaagaccaatttaaaaatttgatacaaagata 22938430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 4872623 - 4872571
Alignment:
Q  17 cattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||| ||||||||||||| ||||||||| || |||||||| ||||||||    
T  4872623 cattttgagttattaatagagttagagatcaatttaagaatttggtacaaaga 4872571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 35251686 - 35251755
Alignment:
Q  26 ttattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    ||||||||||||| || || ||| ||||||||||| |||||||| || ||| |||||| | |||||||||    
T  35251686 ttattaatagagttagggaccaaattgagaatttggtacaaagacagggaccaatttggtggtttactcg 35251755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 36012703 - 36012770
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaattt 82  Q
    |||||||||| ||||||||||||||||||||||| |||| |||||| |||||||| |||||| |||||    
T  36012703 accattttgagttattaatagagtcagagatcaatttgataatttggtacaaagacagagaccaattt 36012770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 55214044 - 55213966
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| ||||||||||| ||||| | ||| |||| |||||| |||||||| ||||||||||||||| ||||||||    
T  55214044 accattttgagttattaatagattcagataccaatttgaaaatttggtacaaagacagagactaatttgat-gtttactc 55213966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 33140566 - 33140620
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||    
T  33140566 accattttgagttattaatagagtcagagatcaatttgagcatttggtacaaaga 33140620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 46164108 - 46164187
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| |||||||||||||||| ||  || |||||||||||||||||||| || | | |||||| | ||||||||    
T  46164108 accattttgagttattaatagagtcagggactaatttgagaatttgatacaaagacagggtccaatttggtggtttactc 46164187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 46163898 - 46163819
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| ||||||||||||||   || ||| ||||||||||| |||||||| || ||| || ||||| ||||||||    
T  46163898 accattttgagttattaatagagtcgcggaccaaattgagaatttggtacaaagacagggaccaacttgatggtttactc 46163819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 7565759 - 7565828
Alignment:
Q  7 agagatgaaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagac 76  Q
    ||||||| |||||||||| ||||||||| ||||  ||| ||| ||||||||||| |||| ||||| ||||    
T  7565759 agagatggaccattttgagttattaataaagtcgtagaccaaattgagaatttggtacagagataaagac 7565828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 12089072 - 12089016
Alignment:
Q  11 atgaaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaa 67  Q
    |||||||||||||||||||||||| |||||| || ||| || | |||||| ||||||    
T  12089072 atgaaccattttgaattattaataaagtcagggaccaatttaaaaatttggtacaaa 12089016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 26122030 - 26121950
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    |||||||||  |||||||||||||||  || ||| ||||||||||| || ||||| || ||| ||| ||||| ||||||||    
T  26122030 accattttgtgttattaatagagtcatggaccaatttgagaatttggtataaagacagtgaccaatgtgataatttactcg 26121950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 33140353 - 33140301
Alignment:
Q  17 cattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||| ||||||||||||||||| |  || || |||||||||||||||||    
T  33140353 cattttgagttattaatagagtcagaaactaatttaagaatttgatacaaaga 33140301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 11732672 - 11732592
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    ||||||||||||||||||||||||||| || ||| |||| |||||| |||||||| |   ||||||||||| |||||||||    
T  11732672 accattttgaattattaatagagtcagtgaccaaattgaaaatttggtacaaagacatgtactaatttgatggtttactcg 11732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 41480795 - 41480875
Alignment:
Q  14 aaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||||||| ||||||||| |||||| || |||  |||||||||| ||||||||||| |||||| |||||  |||||||    
T  41480795 aaccattttgagttattaataaagtcagggaacaatatgagaatttggtacaaagatagggactaaattgatgatttactc 41480875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 5074541 - 5074620
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| |||||||||||| ||| || ||| ||||||||||| ||||||||||  ||  |||||||| ||||||||    
T  5074541 accattttgagttattaatagagacagggaccaatttgagaatttggtacaaagatatggatcaatttgatggtttactc 5074620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 16997172 - 16997093
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| ||||||||||||| ||  | ||| |||| |||||| ||||||||||| ||| |||||||| ||||||||    
T  16997172 accattttgagttattaatagagttaggaaccaaattgataatttggtacaaagatagggaccaatttgatggtttactc 16997093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 42950631 - 42950710
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||| ||||||||||||||||||| | | || | ||||| ||||||||| | |||||||| |||| ||||||||    
T  42950631 accattttgagttattaatagagtcagagacctatttaaaaatttaatacaaagacatagactaatctgatggtttactc 42950710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 38225511 - 38225457
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||||| ||||||||||||| || || ||| ||||||||||| ||||||||    
T  38225511 accattttgagttattaatagagtaagggaccaaattgagaatttggtacaaaga 38225457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 38225718 - 38225776
Alignment:
Q  11 atgaaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||||||| |||||||||||||||||| || ||| |||| |||||| || |||||    
T  38225718 atgaaccattttaaattattaatagagtcagggaccaatttgataatttggtataaaga 38225776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 42950418 - 42950340
Alignment:
Q  17 cattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    |||||||| ||||||||| ||| || |||||| |||| ||||||||||||||| |   || |||||||| |||||||||    
T  42950418 cattttgagttattaataaagttagggatcaaattgaaaatttgatacaaagacaagaaccaatttgatggtttactcg 42950340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 7905710 - 7905633
Alignment:
Q  17 cattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||| |||||||||||||||| ||  || |||| |||||| |||||||| ||  | ||||||||| ||||||||    
T  7905710 cattttgagttattaatagagtcagggactaatttgaaaatttggtacaaagacaggaagtaatttgatggtttactc 7905633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 23488875 - 23488920
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttg 60  Q
    |||||||||||||||| |||||||||| || ||| |||||||||||    
T  23488875 accattttgaattattcatagagtcagggaccaatttgagaatttg 23488920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 17990822 - 17990742
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    |||||||||| |||||||||||||||| || ||| ||||||||||||||| |||| |  ||| |||||| | |||||||||    
T  17990822 accattttgagttattaatagagtcagggaccaaattgagaatttgatacgaagacaatgaccaatttggtggtttactcg 17990742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 8999819 - 8999873
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaaga 69  Q
    |||||||||||| |||||| |||||| ||| ||| ||||||||||||||||||||    
T  8999819 accattttgaatcattaatggagtcacagaccaaattgagaatttgatacaaaga 8999873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 13932849 - 13932927
Alignment:
Q  15 accattttgaattattaatagagtc-agagatcaagttgagaatttgatacaaagatagagactaatttgatagtttact 93  Q
    |||||||||| |||||||||||||| ||| ||||| ||||||||||  |||||| |||| ||| |||||||| |||||||    
T  13932849 accattttgagttattaatagagtcgaga-atcaatttgagaatttagtacaaaaatagggaccaatttgatggtttact 13932927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 36150815 - 36150743
Alignment:
Q  11 atgaaccattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttg 83  Q
    |||||||||||||| ||||| ||||||| || || ||| ||||||||||  |||| |||||| ||| ||||||    
T  36150815 atgaaccattttgagttattcatagagttagggaccaatttgagaatttagtacatagatagggaccaatttg 36150743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000008; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7481110 - 7481035
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||| ||||||||||||||| || || ||| || |||||||| ||||||||||| |||||||||||| ||||||||    
T  7481110 attttaaattattaatagagttag-gaccaaattaagaatttggtacaaagatagtgactaatttgatggtttactc 7481035  T

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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 49784600 - 49784524
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagttta 91  Q
    |||||||||| |||||||||||||||| ||  || |||| |||||  |||||||| || ||||||||||||||||||    
T  49784600 accattttgagttattaatagagtcagggactaaattgaaaatttagtacaaagacagggactaatttgatagttta 49784524  T

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Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 7481211 - 7481290
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||| | ||||||||||||||  ||| ||  ||||||||||| |||||| | |||||| |||||||| ||||||||    
T  7481211 accattttaagttattaatagagtcgaagaccagtttgagaatttgttacaaatacagagaccaatttgatggtttactc 7481290  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 23329363 - 23329296
Alignment:
Q  27 tattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    |||||||||||||||  | ||| ||||||||||||||||||||||   || |||||||| ||||||||    
T  23329363 tattaatagagtcaggaaccaaattgagaatttgatacaaagataagaaccaatttgatggtttactc 23329296  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 20993930 - 20993853
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactcg 95  Q
    ||||||| ||||||||||| |||  || |||||||||||||| ||| ||| |||||||  ||||||||  ||||||||    
T  20993930 attttgagttattaatagaatcatggaccaagttgagaattttatataaaaatagagatcaatttgatgatttactcg 20993853  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 38208522 - 38208575
Alignment:
Q  30 taatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttg 83  Q
    |||||||||||| || ||| ||||||||||| |||||||| |||||| ||||||    
T  38208522 taatagagtcagggaccaatttgagaatttggtacaaagacagagaccaatttg 38208575  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 70852 - 70919
Alignment:
Q  15 accattttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaattt 82  Q
    ||||||||||  |||||||||||||||||| ||| ||||||||||  |||||||| || ||| |||||    
T  70852 accattttgagctattaatagagtcagagaccaatttgagaatttagtacaaagacagggaccaattt 70919  T

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Target: scaffold0081 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8705 - 8781
Alignment:
Q  18 attttgaattattaatagagtcagagatcaagttgagaatttgatacaaagatagagactaatttgatagtttactc 94  Q
    ||||||| ||||||||||||| || |  ||| ||||||| || ||| |||||||||||| ||||| || ||||||||    
T  8705 attttgagttattaatagagttagggtccaaattgagaacttaatataaagatagagaccaatttaatggtttactc 8781  T

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