View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8100_low_33 (Length: 317)

Name: NF8100_low_33
Description: NF8100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8100_low_33
NF8100_low_33
[»] chr2 (48 HSPs)
chr2 (4-317)||(32781361-32781667)
chr2 (231-317)||(24200698-24200785)
chr2 (221-317)||(8455389-8455487)
chr2 (221-317)||(10543662-10543760)
chr2 (221-317)||(12023992-12024089)
chr2 (221-317)||(14530282-14530380)
chr2 (212-309)||(29419970-29420068)
chr2 (221-313)||(21377150-21377243)
chr2 (231-317)||(7214509-7214596)
chr2 (212-310)||(17380317-17380415)
chr2 (231-317)||(17667977-17668064)
chr2 (212-314)||(44521449-44521552)
chr2 (214-317)||(99338-99440)
chr2 (231-317)||(17623539-17623626)
chr2 (221-317)||(25079790-25079889)
chr2 (231-313)||(40416948-40417031)
chr2 (209-317)||(5450238-5450348)
chr2 (221-317)||(11514400-11514498)
chr2 (232-317)||(33795261-33795347)
chr2 (231-317)||(22371032-22371116)
chr2 (232-317)||(23145771-23145857)
chr2 (232-317)||(23557561-23557647)
chr2 (221-317)||(25249811-25249908)
chr2 (213-317)||(4516424-4516529)
chr2 (229-317)||(5841001-5841090)
chr2 (221-317)||(21779334-21779430)
chr2 (231-317)||(17896234-17896322)
chr2 (231-317)||(23397741-23397826)
chr2 (245-317)||(19614981-19615054)
chr2 (231-310)||(39914385-39914466)
chr2 (221-274)||(44643487-44643540)
chr2 (247-317)||(10546153-10546225)
chr2 (212-310)||(31821423-31821517)
chr2 (234-309)||(44604832-44604907)
chr2 (231-313)||(17705470-17705553)
chr2 (232-317)||(9671156-9671241)
chr2 (255-309)||(12315733-12315787)
chr2 (215-284)||(35017776-35017846)
chr2 (243-284)||(25641489-25641530)
chr2 (234-309)||(31158522-31158598)
chr2 (247-313)||(14444720-14444786)
chr2 (231-317)||(19977787-19977874)
chr2 (221-263)||(27573585-27573628)
chr2 (233-284)||(45235925-45235976)
chr2 (221-316)||(14544027-14544125)
chr2 (212-258)||(35010503-35010549)
chr2 (245-286)||(34752767-34752808)
chr2 (221-299)||(24860077-24860157)
[»] chr6 (31 HSPs)
chr6 (220-317)||(12221990-12222089)
chr6 (212-314)||(13905055-13905158)
chr6 (212-317)||(7947445-7947551)
chr6 (221-317)||(8409207-8409305)
chr6 (221-317)||(1346928-1347024)
chr6 (221-317)||(1354830-1354926)
chr6 (243-317)||(29355930-29356005)
chr6 (221-317)||(20400631-20400729)
chr6 (233-317)||(2166485-2166570)
chr6 (233-317)||(2178118-2178203)
chr6 (212-314)||(12889382-12889485)
chr6 (221-317)||(3815150-3815248)
chr6 (232-317)||(9161099-9161184)
chr6 (248-317)||(17448316-17448386)
chr6 (233-309)||(32728237-32728314)
chr6 (231-314)||(24097556-24097640)
chr6 (231-317)||(1941830-1941917)
chr6 (231-313)||(14553487-14553569)
chr6 (248-310)||(17432332-17432395)
chr6 (234-299)||(22967149-22967215)
chr6 (234-299)||(23821178-23821244)
chr6 (231-284)||(8417447-8417500)
chr6 (222-300)||(24734598-24734678)
chr6 (232-302)||(14975168-14975239)
chr6 (243-310)||(18277273-18277341)
chr6 (231-317)||(27855510-27855598)
chr6 (234-313)||(32068074-32068151)
chr6 (231-317)||(6024208-6024295)
chr6 (231-317)||(15866110-15866197)
chr6 (237-279)||(13371625-13371667)
chr6 (232-284)||(2755531-2755583)
[»] chr4 (59 HSPs)
chr4 (212-317)||(19027804-19027910)
chr4 (216-317)||(487208-487310)
chr4 (222-315)||(42164224-42164317)
chr4 (231-317)||(44363205-44363292)
chr4 (221-317)||(6430699-6430796)
chr4 (221-317)||(16408676-16408774)
chr4 (221-317)||(20224948-20225044)
chr4 (221-317)||(48598898-48598994)
chr4 (212-310)||(54966977-54967076)
chr4 (221-317)||(5306737-5306834)
chr4 (221-317)||(5648223-5648320)
chr4 (221-317)||(21646928-21647026)
chr4 (213-317)||(25343144-25343249)
chr4 (227-313)||(35567141-35567228)
chr4 (221-317)||(16911526-16911624)
chr4 (221-317)||(30639344-30639441)
chr4 (231-317)||(47528603-47528688)
chr4 (212-317)||(17043467-17043570)
chr4 (231-310)||(37494826-37494906)
chr4 (221-314)||(10660368-10660463)
chr4 (221-314)||(10874513-10874608)
chr4 (243-317)||(25463109-25463184)
chr4 (232-314)||(43035224-43035307)
chr4 (212-313)||(51420529-51420632)
chr4 (212-284)||(30496427-30496500)
chr4 (222-317)||(11054221-11054316)
chr4 (221-314)||(14590801-14590897)
chr4 (221-300)||(54640429-54640509)
chr4 (232-314)||(17315375-17315457)
chr4 (221-275)||(23501757-23501812)
chr4 (231-317)||(40915804-40915890)
chr4 (212-313)||(3580917-3581015)
chr4 (212-311)||(32629348-32629444)
chr4 (212-313)||(36589700-36589801)
chr4 (232-313)||(39029138-39029220)
chr4 (243-310)||(7385556-7385624)
chr4 (234-313)||(32478863-32478942)
chr4 (237-317)||(39077869-39077948)
chr4 (255-317)||(47443956-47444019)
chr4 (212-275)||(50856352-50856415)
chr4 (212-317)||(54175020-54175125)
chr4 (222-317)||(54730214-54730312)
chr4 (222-275)||(47441646-47441699)
chr4 (221-316)||(49938513-49938609)
chr4 (212-284)||(49938697-49938770)
chr4 (231-310)||(14983809-14983889)
chr4 (211-317)||(20908710-20908818)
chr4 (234-317)||(23580281-23580365)
chr4 (243-298)||(41018885-41018941)
chr4 (250-317)||(9832386-9832452)
chr4 (221-310)||(30581546-30581637)
chr4 (244-309)||(7038041-7038106)
chr4 (228-286)||(44357192-44357250)
chr4 (231-272)||(5313113-5313154)
chr4 (221-300)||(30352681-30352762)
chr4 (234-290)||(6966070-6966126)
chr4 (267-314)||(17079727-17079775)
chr4 (234-282)||(30690292-30690340)
chr4 (231-317)||(55766539-55766626)
[»] chr1 (61 HSPs)
chr1 (216-313)||(18724622-18724720)
chr1 (216-313)||(22327082-22327180)
chr1 (231-317)||(46248026-46248113)
chr1 (231-313)||(46991802-46991885)
chr1 (221-317)||(18944630-18944728)
chr1 (221-317)||(19932828-19932923)
chr1 (221-317)||(30395801-30395899)
chr1 (208-317)||(34725171-34725280)
chr1 (221-285)||(20036208-20036272)
chr1 (231-317)||(20004165-20004252)
chr1 (231-317)||(23768393-23768480)
chr1 (212-317)||(2435860-2435966)
chr1 (220-317)||(11596500-11596597)
chr1 (232-317)||(14617037-14617123)
chr1 (212-317)||(17470419-17470525)
chr1 (221-317)||(32632630-32632727)
chr1 (212-309)||(6983892-6983988)
chr1 (229-317)||(27201643-27201732)
chr1 (209-317)||(44485182-44485291)
chr1 (208-315)||(15511226-15511334)
chr1 (232-311)||(25290162-25290244)
chr1 (214-317)||(50760299-50760403)
chr1 (231-317)||(41319879-41319966)
chr1 (235-316)||(9939463-9939545)
chr1 (212-300)||(2435983-2436072)
chr1 (231-315)||(6925098-6925183)
chr1 (233-317)||(24564344-24564429)
chr1 (214-317)||(50811920-50812025)
chr1 (222-317)||(47214499-47214594)
chr1 (212-284)||(52910196-52910268)
chr1 (231-317)||(4430099-4430186)
chr1 (221-310)||(22930148-22930238)
chr1 (249-314)||(35005139-35005205)
chr1 (232-313)||(35117845-35117927)
chr1 (231-284)||(27474279-27474332)
chr1 (221-317)||(38478355-38478451)
chr1 (242-317)||(10668234-10668310)
chr1 (221-317)||(18742032-18742132)
chr1 (221-284)||(34714610-34714674)
chr1 (218-317)||(39215032-39215132)
chr1 (216-286)||(25554827-25554897)
chr1 (212-317)||(34679292-34679398)
chr1 (221-317)||(12126910-12127006)
chr1 (221-317)||(27136725-27136822)
chr1 (242-317)||(31272448-31272523)
chr1 (231-317)||(8197041-8197128)
chr1 (212-310)||(19701549-19701648)
chr1 (221-275)||(40424729-40424784)
chr1 (212-282)||(10378834-10378904)
chr1 (232-317)||(33222983-33223068)
chr1 (231-275)||(19414437-19414481)
chr1 (221-284)||(45812642-45812706)
chr1 (221-314)||(35019218-35019312)
chr1 (247-317)||(35253260-35253329)
chr1 (242-284)||(43768167-43768209)
chr1 (212-285)||(6358113-6358186)
chr1 (1-34)||(7210626-7210659)
chr1 (249-313)||(45264477-45264542)
chr1 (221-284)||(18335395-18335459)
chr1 (244-284)||(19974181-19974221)
chr1 (221-284)||(45402082-45402145)
[»] chr3 (43 HSPs)
chr3 (210-317)||(26573103-26573211)
chr3 (205-317)||(40272885-40272999)
chr3 (221-317)||(8247762-8247860)
chr3 (212-317)||(34420717-34420823)
chr3 (205-317)||(45620901-45621015)
chr3 (221-317)||(46421110-46421208)
chr3 (214-314)||(53996642-53996743)
chr3 (221-317)||(10870025-10870122)
chr3 (221-313)||(13730681-13730775)
chr3 (221-317)||(22609753-22609849)
chr3 (235-317)||(13628865-13628948)
chr3 (231-317)||(29366795-29366882)
chr3 (221-317)||(12914108-12914206)
chr3 (212-305)||(35417894-35417988)
chr3 (243-315)||(516418-516491)
chr3 (212-307)||(53062016-53062112)
chr3 (231-317)||(26869704-26869790)
chr3 (221-317)||(9607189-9607287)
chr3 (245-314)||(45139554-45139624)
chr3 (245-314)||(54032635-54032705)
chr3 (221-317)||(1217076-1217172)
chr3 (221-317)||(7696960-7697056)
chr3 (249-317)||(54374419-54374488)
chr3 (231-317)||(4495737-4495824)
chr3 (221-317)||(16735427-16735524)
chr3 (235-299)||(5173811-5173876)
chr3 (215-314)||(45948914-45949017)
chr3 (214-313)||(25944449-25944549)
chr3 (243-310)||(30928227-30928295)
chr3 (221-284)||(52926317-52926381)
chr3 (231-317)||(6411895-6411981)
chr3 (231-317)||(22122990-22123075)
chr3 (237-317)||(7942993-7943074)
chr3 (233-317)||(39203515-39203598)
chr3 (221-315)||(12525396-12525489)
chr3 (243-314)||(8410943-8411013)
chr3 (267-317)||(14986990-14987041)
chr3 (247-317)||(39212003-39212074)
chr3 (212-290)||(1121326-1121404)
chr3 (214-259)||(21330379-21330424)
chr3 (245-313)||(33926094-33926162)
chr3 (262-317)||(10795498-10795554)
chr3 (221-264)||(25517300-25517344)
[»] chr8 (36 HSPs)
chr8 (221-317)||(44530113-44530211)
chr8 (212-313)||(44781583-44781685)
chr8 (231-317)||(28817699-28817786)
chr8 (231-317)||(36720771-36720858)
chr8 (221-317)||(7136602-7136700)
chr8 (221-317)||(39461069-39461167)
chr8 (221-317)||(12670323-12670419)
chr8 (221-313)||(20869575-20869667)
chr8 (221-317)||(30454170-30454266)
chr8 (221-316)||(30962847-30962943)
chr8 (220-317)||(6760785-6760884)
chr8 (212-317)||(14018042-14018148)
chr8 (221-317)||(17823540-17823638)
chr8 (227-312)||(22598128-22598214)
chr8 (221-317)||(29521758-29521856)
chr8 (221-317)||(35261643-35261741)
chr8 (212-317)||(42083772-42083878)
chr8 (212-317)||(44742592-44742698)
chr8 (221-311)||(28407380-28407471)
chr8 (221-317)||(2626483-2626584)
chr8 (231-317)||(13160677-13160763)
chr8 (236-317)||(18164833-18164914)
chr8 (232-317)||(20284144-20284232)
chr8 (232-284)||(21070809-21070861)
chr8 (231-283)||(24245426-24245478)
chr8 (231-317)||(26954107-26954195)
chr8 (231-317)||(8897837-8897924)
chr8 (231-317)||(25250497-25250584)
chr8 (235-317)||(35105902-35105985)
chr8 (231-317)||(45071240-45071326)
chr8 (221-317)||(8484011-8484108)
chr8 (243-309)||(11748286-11748353)
chr8 (233-315)||(24365134-24365218)
chr8 (238-299)||(31457155-31457217)
chr8 (252-313)||(36918120-36918182)
chr8 (231-314)||(12625864-12625949)
[»] chr5 (33 HSPs)
chr5 (212-317)||(39301079-39301185)
chr5 (221-315)||(23974745-23974840)
chr5 (221-317)||(38879545-38879643)
chr5 (221-317)||(43334166-43334265)
chr5 (221-317)||(4619179-4619277)
chr5 (221-317)||(24448854-24448952)
chr5 (212-314)||(209004-209106)
chr5 (231-317)||(27328727-27328814)
chr5 (231-317)||(37024629-37024714)
chr5 (221-317)||(41014283-41014380)
chr5 (221-317)||(8170057-8170153)
chr5 (232-317)||(28516507-28516593)
chr5 (212-282)||(39079875-39079945)
chr5 (248-317)||(42924907-42924977)
chr5 (221-316)||(35710277-35710372)
chr5 (221-286)||(1565395-1565461)
chr5 (216-317)||(19143016-19143117)
chr5 (243-317)||(32703411-32703484)
chr5 (216-312)||(10634224-10634321)
chr5 (232-317)||(2838754-2838840)
chr5 (231-313)||(22600429-22600512)
chr5 (251-313)||(22025538-22025601)
chr5 (212-317)||(43574553-43574668)
chr5 (236-312)||(12006408-12006485)
chr5 (231-284)||(17419889-17419942)
chr5 (233-317)||(22187262-22187347)
chr5 (234-286)||(24313680-24313732)
chr5 (234-286)||(24356017-24356069)
chr5 (260-314)||(41425952-41426007)
chr5 (243-299)||(1850627-1850684)
chr5 (234-275)||(22861782-22861823)
chr5 (231-284)||(31299607-31299660)
chr5 (236-316)||(34074636-34074717)
[»] chr7 (60 HSPs)
chr7 (221-317)||(46354158-46354256)
chr7 (221-317)||(2541092-2541191)
chr7 (231-317)||(11617661-11617748)
chr7 (212-317)||(23419747-23419853)
chr7 (221-317)||(42798633-42798731)
chr7 (211-282)||(13805057-13805128)
chr7 (231-313)||(42805499-42805582)
chr7 (231-317)||(43557447-43557534)
chr7 (221-317)||(27629598-27629696)
chr7 (221-317)||(48735195-48735292)
chr7 (222-317)||(19426962-19427059)
chr7 (221-317)||(21172082-21172178)
chr7 (221-309)||(35334897-35334985)
chr7 (214-309)||(7644914-7645010)
chr7 (231-317)||(33871983-33872069)
chr7 (238-317)||(42391173-42391251)
chr7 (235-317)||(47716438-47716521)
chr7 (212-317)||(28362218-28362324)
chr7 (221-317)||(10693146-10693242)
chr7 (221-316)||(14732896-14732993)
chr7 (213-317)||(19265772-19265876)
chr7 (221-313)||(32758225-32758317)
chr7 (212-308)||(48123566-48123663)
chr7 (221-284)||(47077960-47078024)
chr7 (221-310)||(42495916-42496006)
chr7 (212-317)||(19266406-19266512)
chr7 (233-313)||(7193062-7193143)
chr7 (210-317)||(12473257-12473366)
chr7 (243-317)||(18747473-18747549)
chr7 (231-317)||(22699043-22699130)
chr7 (232-317)||(14099079-14099165)
chr7 (232-317)||(14409096-14409182)
chr7 (221-313)||(18326998-18327091)
chr7 (211-264)||(3469306-3469359)
chr7 (227-299)||(22065559-22065632)
chr7 (235-317)||(11741774-11741855)
chr7 (245-316)||(29907408-29907480)
chr7 (253-317)||(31591182-31591245)
chr7 (223-275)||(39123857-39123909)
chr7 (231-309)||(5180238-5180317)
chr7 (222-314)||(1423986-1424080)
chr7 (231-312)||(7794582-7794666)
chr7 (212-317)||(32233208-32233313)
chr7 (231-316)||(34626282-34626367)
chr7 (232-317)||(40463853-40463938)
chr7 (221-312)||(5814435-5814528)
chr7 (257-317)||(7879639-7879700)
chr7 (221-317)||(42101958-42102055)
chr7 (231-317)||(8149018-8149106)
chr7 (222-317)||(16341244-16341340)
chr7 (212-275)||(6736846-6736909)
chr7 (255-317)||(18512526-18512588)
chr7 (221-284)||(44123728-44123791)
chr7 (234-276)||(11458379-11458421)
chr7 (231-317)||(42476848-42476933)
chr7 (221-285)||(29140466-29140531)
chr7 (221-277)||(8491884-8491940)
chr7 (221-277)||(8518693-8518749)
chr7 (236-284)||(28078238-28078286)
chr7 (254-317)||(35203437-35203501)
[»] scaffold0057 (3 HSPs)
scaffold0057 (221-317)||(46795-46893)
scaffold0057 (212-275)||(46999-47062)
scaffold0057 (221-317)||(24845-24938)
[»] scaffold0254 (1 HSPs)
scaffold0254 (233-317)||(4134-4219)
[»] scaffold0168 (1 HSPs)
scaffold0168 (221-317)||(30543-30639)
[»] scaffold0024 (1 HSPs)
scaffold0024 (221-285)||(83839-83904)
[»] scaffold0049 (1 HSPs)
scaffold0049 (243-317)||(58964-59039)
[»] scaffold0311 (1 HSPs)
scaffold0311 (231-316)||(10785-10871)
[»] scaffold0187 (2 HSPs)
scaffold0187 (231-317)||(10123-10208)
scaffold0187 (231-317)||(20451-20536)
[»] scaffold0167 (1 HSPs)
scaffold0167 (212-317)||(23559-23661)
[»] scaffold0005 (1 HSPs)
scaffold0005 (221-314)||(226481-226577)
[»] scaffold1176 (1 HSPs)
scaffold1176 (231-314)||(1663-1745)
[»] scaffold0258 (1 HSPs)
scaffold0258 (232-317)||(13097-13182)
[»] scaffold0116 (1 HSPs)
scaffold0116 (231-299)||(8866-8935)
[»] scaffold0223 (1 HSPs)
scaffold0223 (221-284)||(11096-11159)
[»] scaffold0031 (1 HSPs)
scaffold0031 (231-284)||(43104-43157)
[»] scaffold0036 (1 HSPs)
scaffold0036 (231-317)||(35090-35179)


Alignment Details
Target: chr2 (Bit Score: 146; Significance: 7e-77; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 4 - 317
Target Start/End: Complemental strand, 32781667 - 32781361
Alignment:
Q  4 gtacaaaatattgtcaaatagtgactatagcgggctacaagactgttgcgcaaagtgatttgaacaaaccgttattttctgcaatttttaattgacatca 103  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||| |  || |||||||||||||| |||||||||||||| | | ||||||| ||    
T  32781667 gtacaaaatattgtcaaatagtgactatcgcaggctacaagactgttgcacggagggatttgaacaaaccattattttctgcaatctgtcattgacaaca 32781568  T
Q  104 tcggtcattaatgtcacatatacttcttatttgtaataatgatcatatttataatgggagtgtgtttcatctcttgaaaattttattggttacttagctt 203  Q
     ||||| |||||||||   || |||||||||||||||||||||||||||||||||| |||||| |||| |||||| |||||        ||||| |||||    
T  32781567 ccggtccttaatgtcatgcattcttcttatttgtaataatgatcatatttataatgagagtgtatttcgtctcttaaaaat--------ttactaagctt 32781476  T
Q  204 aattactgagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaaca 302  Q
    ||||||| |||||||  ||||||||||||||||||||| ||  ||||  |||||||||||||||||||||||| ||||||||| || |||||||||||||    
T  32781475 aattactaagggggaaccttggcgcaatggtaaagttgttgcaatgttgctgaaaggtcacgagttcaagtctcggaaacaacctcttgtgtaaaaaaca 32781376  T
Q  303 gggtaaggctgcgta 317  Q
    ||||||| |||||||    
T  32781375 gggtaagactgcgta 32781361  T

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Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 24200785 - 24200698
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  24200785 tggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 24200698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 8455487 - 8455389
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||||||| ||||||||||||||||||    
T  8455487 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaaggctgcgta 8455389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 10543662 - 10543760
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| || |||||||| ||||||||||||||||||||||| ||||||||| |||||||  | || ||||||||||||||||||||||||||||    
T  10543662 cttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaaggctgcgta 10543760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 12024089 - 12023992
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||||||||||    
T  12024089 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 12023992  T

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Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 14530282 - 14530380
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||| ||||||||||||||||||| ||||    
T  14530282 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctacgta 14530380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 29420068 - 29419970
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||||| |||||  ||| |||||||||| |||||  |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  29420068 agggggagtcttggtccaacggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaag 29419970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 21377243 - 21377150
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||| |||| |||||||||| ||||||||||||||||||| ||||||||||||| | |||||| | || ||||||||||||||||||||||||    
T  21377243 cttggagcaacggtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctg 21377150  T

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Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 7214509 - 7214596
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||  ||  ||||||||| ||||||||||||||||||    
T  7214509 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaatacagggtaaggctgcgta 7214596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 17380415 - 17380317
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||||||  |||||| ||||||||||| ||||||||||| |||||||||||||||||||| || ||||| | |||||||||||||    
T  17380415 agggggagccttggcgcaatggcgaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt-ataaacagggtaagg 17380317  T

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Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 17667977 - 17668064
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||| ||| || |||||||||| |||||||||||||||||    
T  17667977 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgta 17668064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 44521552 - 44521449
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa-cttctgtgtaaaaaacagggtaagg 310  Q
    |||||||| ||||||| || |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||| ||  ||||||||||||| |||||||    
T  44521552 agggggagccttggcggaacggtaaagttgttatcacgtgactgaaaggtcacgcgttcaaatcttggaaacaatctcttgtgtaaaaaacaaggtaagg 44521453  T
Q  311 ctgc 314  Q
    ||||    
T  44521452 ctgc 44521449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 99440 - 99338
Alignment:
Q  214 ggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctg 313  Q
    |||||| ||||||||||  ||||||||| ||||| ||||||||||||||||| ||||||||| | |||||| | ||| ||||||||||| || |||||||    
T  99440 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctct-tgtaaaaaacatggcaaggctg 99342  T
Q  314 cgta 317  Q
    ||||    
T  99341 cgta 99338  T

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Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 17623539 - 17623626
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||| ||||| ||||||||| ||||||||| | |||||||| || |||||||||| |||||||||||||||||    
T  17623539 tggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgta 17623626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 25079889 - 25079790
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||||| || ||||| |||||||| ||||||| ||||||    
T  25079889 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggtaaggatgcgta 25079790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 313
Target Start/End: Complemental strand, 40417031 - 40416948
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||||| || ||| |||||||||||| |||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctcttgtataaaaaacagggaaaggctg 40416948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 317
Target Start/End: Original strand, 5450238 - 5450348
Alignment:
Q  209 ctgagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggt 306  Q
    |||||| |||| ||||| |||  | |||||||| ||||||||||||||||||||||| |||||| || |||||||||| || ||||| |||||||| |||    
T  5450238 ctgaggtggagccttggtgcagcgttaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggt 5450337  T
Q  307 aaggctgcgta 317  Q
    |||||||||||    
T  5450338 aaggctgcgta 5450348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 11514400 - 11514498
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| |||||| || |||||||| | || |||||||||||||  |||||||||||||    
T  11514400 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaaggctgcgta 11514498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 33795261 - 33795347
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||| |||| |||||||||||| |||||||||  ||||||||| || || |||||||||||||||||||||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctcttgggtaaaaaacagggtaaggctgcgta 33795347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 22371032 - 22371116
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||||||  |||||||| ||||||||| |||||||| | || |||| ||||||||||||||||||||||    
T  22371032 tggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctc-gtgt-aaaaacagggtaaggctgcgta 22371116  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 23145857 - 23145771
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||   ||||||||||||||||| |||||||||||| ||||| |||  |||||||||||||| |||||||||||||    
T  23145857 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgta 23145771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 23557647 - 23557561
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||   ||||||||||||||||| |||||||||||| ||||| |||  |||||||||||||| |||||||||||||    
T  23557647 ggtaaagttgttgtagcgtgactgaaaggtcacgggttcaagtcttgaaaacagactcttgtgtaaaaaacagtgtaaggctgcgta 23557561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 25249908 - 25249811
Alignment:
Q  221 cttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||  ||  ||||| | ||||||||||||||||||||    
T  25249908 cttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgt-acaaacagggtaaggctgcgta 25249811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 4516529 - 4516424
Alignment:
Q  213 gggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggc 311  Q
    ||||||| |||||||||| |||||||||| ||||| ||||||||||||||||   |||||||  | |||||| | || |||||||||||||||| || ||    
T  4516529 gggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgc 4516430  T
Q  312 tgcgta 317  Q
    ||||||    
T  4516429 tgcgta 4516424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 5841001 - 5841090
Alignment:
Q  229 aatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||| |||||||| ||||||||||||| ||||||||| ||||||||| | ||||||  ||| ||||||||||| ||||||||| ||||||    
T  5841001 aatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaaggatgcgta 5841090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 21779430 - 21779334
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||| ||||||||| |||| ||| | ||| |||  |||||||||||||| ||||||    
T  21779430 cttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctct-tgtgtaaaacagggtaaggttgcgta 21779334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 17896234 - 17896322
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||| |||||||||||  |||||||| | |||||||| || ||||| |||||| ||||||||||||||||    
T  17896234 tggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaaggctgcgta 17896322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 23397741 - 23397826
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||| |||||||| | ||| |||  |||| ||||||||||| ||||    
T  23397741 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctct-tgtgtaaaatagggtaaggctacgta 23397826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 317
Target Start/End: Original strand, 19614981 - 19615054
Alignment:
Q  245 tcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||||||| ||||||||| | |||||| | || ||| |||||||||||||||| |||||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctcttgtataaaaaacagggtaagactgcgta 19615054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 310
Target Start/End: Complemental strand, 39914466 - 39914385
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaagg 310  Q
    ||||||||||| ||||||||||||| ||||||||| | ||||||  |||||||||| || ||||| ||||||||||||||||    
T  39914466 tggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaagg 39914385  T

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Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 44643487 - 44643540
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagt 274  Q
    |||||||||||||||||||||   ||||||||||||||||||||| ||||||||    
T  44643487 cttggcgcaatggtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagt 44643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 10546153 - 10546225
Alignment:
Q  247 atgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||||| ||||||||| |||||||| | || ||| | |||||||||||||||||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgta 10546225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 31821517 - 31821423
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| |||| ||||| |   ||||||||||||||||||||||||||||| | |||||| |   ||||||||||| |||||||||    
T  31821517 agggggagccttggcgcaacggtatagttgtt---atgtgactgaaaggtcacgagttcaagtcgtagaaacagc-cgtgtgtaaaaaatagggtaagg 31821423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 44604832 - 44604907
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||||| ||||||||||||| ||||||||  ||||||||| |||||||||| || ||||| ||||||||||||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaag 44604907  T

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Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 17705470 - 17705553
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||| ||||||||||||  ||||||||| ||||||||| |||||||  | || |||||||| ||||| |||||||||    
T  17705470 tggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctcttgtgtaaacaacagagtaaggctg 17705553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 9671156 - 9671241
Alignment:
Q  232 ggtaaagttgatgtcatgtgactg-aaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||| ||| |||||| |||||| || |||||||| | ||| |||  |||||||||||||||||||||    
T  9671156 ggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 9671241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 12315787 - 12315733
Alignment:
Q  255 gaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaag 309  Q
    ||||||||||||||||||||| |||||||| |||||   ||||||||||||||||    
T  12315787 gaaaggtcacgagttcaagtcatggaaacagcttcttattaaaaaacagggtaag 12315733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 284
Target Start/End: Original strand, 35017776 - 35017846
Alignment:
Q  215 gggagacttggcgcaatggtaaagttgatgtcatgtgac-tgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||| |||||||||| |||||||||| ||||||||||| |||||||||||| ||| ||||| || |||||    
T  35017776 gggagccttggcgcaacggtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaaca 35017846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 284
Target Start/End: Original strand, 25641489 - 25641530
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||||||||||||||||||| ||||||||| ||||||||    
T  25641489 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 25641530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 309
Target Start/End: Complemental strand, 31158598 - 31158522
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||||| ||||||||||||||||||||| | ||| |||||||  ||||| | || || |||||||||||||||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaag 31158522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 313
Target Start/End: Original strand, 14444720 - 14444786
Alignment:
Q  247 atgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctg 313  Q
    ||||||||| ||||||||| ||||||||| |||||||| | ||| |||||||| ||||||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-acagggtaaggctg 14444786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 19977874 - 19977787
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||| |||||| ||||||||||| ||||||||||| ||||||||  |||||||| | || | ||||||||| ||| ||||| ||||||    
T  19977874 tggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataaggttgcgta 19977787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 27573585 - 27573628
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtca 263  Q
    |||||||||| ||||||||||| |||||||||||||||||||||    
T  27573585 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtca 27573628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 45235976 - 45235925
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||||| | ||||||||||||||| ||||||||||||||| | ||||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaaca 45235925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 14544027 - 14544125
Alignment:
Q  221 cttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgta-aaaaacagggtaaggctgcgt 316  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||  || || ||  |||||||| | || |||||| |||||||||||||| ||||||    
T  14544027 cttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctcttgtgtagaaaaacagggtaagactgcgt 14544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 35010503 - 35010549
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaa 258  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||    
T  35010503 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaa 35010549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 34752808 - 34752767
Alignment:
Q  245 tcatgtgactgaaaggtcacgagttcaagtcttggaaacaac 286  Q
    |||||||||||||||||||||| |||||||  ||||||||||    
T  34752808 tcatgtgactgaaaggtcacgaattcaagttctggaaacaac 34752767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 299
Target Start/End: Complemental strand, 24860157 - 24860077
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaa 299  Q
    |||||||||| ||||||| ||| ||||||||||||| ||||| ||| ||| ||| | |||||||||| ||| |||||||||    
T  24860157 cttggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaa 24860077  T

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Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 220 - 317
Target Start/End: Complemental strand, 12222089 - 12221990
Alignment:
Q  220 acttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  12222089 acttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 12221990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 13905158 - 13905055
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||  |||||||||| |||||||||| ||||||||||||||||||||||| | ||||||| || |||| || || |||||||||||||||||||||    
T  13905158 agggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaagg 13905059  T
Q  311 ctgc 314  Q
    ||||    
T  13905058 ctgc 13905055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 7947551 - 7947445
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa-cttctgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| |||||||||| |||   ||||||||||||||||  |||||| || ||||||||| || ||||||||||| ||||||||||    
T  7947551 agggggagccttggcgcaacggtaaagttggtgttgcgtgactgaaaggtcaccggttcaactcctggaaacaacctcctgtgtaaaaaccagggtaagg 7947452  T
Q  311 ctgcgta 317  Q
    |||||||    
T  7947451 ctgcgta 7947445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 8409207 - 8409305
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||  |||||||| |||||||  | || ||||||||||||||||||||||||||||    
T  8409207 cttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctcttgtgtaaaaaacagggtaaggctgcgta 8409305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 1346928 - 1347024
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| |  || |||  |||||||||||||||||||||    
T  1346928 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccact-tgtgtaaaacagggtaaggctgcgta 1347024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 1354926 - 1354830
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  1354926 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 1354830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 317
Target Start/End: Complemental strand, 29356005 - 29355930
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||||||||| ||||||||| |||||||| | || ||||||| ||||||||||||||||||||    
T  29356005 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgta 29355930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 20400631 - 20400729
Alignment:
Q  221 cttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa-cttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||  ||||||||  ||||||||| ||  |||||||||||||||||||| |||||||    
T  20400631 cttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagttatggaaacaatctcttgtgtaaaaaacagggtaagactgcgta 20400729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 2166570 - 2166485
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||| |||||||||| || ||||||||| ||||| ||||| ||||||    
T  2166570 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgta 2166485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 317
Target Start/End: Complemental strand, 2178203 - 2178118
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||| |||||||||| || ||||||||| ||||| ||||| ||||||    
T  2178203 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgta 2178118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 12889382 - 12889485
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||| ||| |||||||||| ||||| |||| |||||||||||  |||||||||||| ||||| | || ||||| |||||||||| ||||    
T  12889382 agggggagccttggcacaacggtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctcttgtgttaaaaacagggcaagg 12889481  T
Q  311 ctgc 314  Q
    ||||    
T  12889482 ctgc 12889485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 3815248 - 3815150
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||| |||||||| |||  ||||||||||| | |||| | |||||||    
T  3815248 cttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacagactattgtgtaaaaaatatggtacgactgcgta 3815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 9161099 - 9161184
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||||||||||||  ||||||||| |||||||| | || ||||| |||||||| |||||||||||||    
T  9161099 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgt-aaaaacagagtaaggctgcgta 9161184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 248 - 317
Target Start/End: Original strand, 17448316 - 17448386
Alignment:
Q  248 tgtgactgaaaggtcacgagttcaagtcttggaaacaac-ttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||| |||||||||||| |||||||| ||| ||||||| || ||||||||||||||||||||||||||||    
T  17448316 tgtgattgaaaggtcacgggttcaagttttgaaaacaacattttgtgtaaaaaacagggtaaggctgcgta 17448386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 32728314 - 32728237
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    ||||||||| ||||||||||||||||||||||   ||||||| ||||||||||| || | ||||||||||||||||||    
T  32728314 gtaaagttgttgtcatgtgactgaaaggtcacagattcaagttttggaaacaacctcttatgtaaaaaacagggtaag 32728237  T

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Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 24097556 - 24097640
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    ||||||| |||||||||||| |||||||||||||||||| ||||| | ||| || | || ||| |||||||||||||||||||||    
T  24097556 tggtaaaattgatgtcatgttactgaaaggtcacgagtttaagtcctcgaaccagcctcttgtataaaaaacagggtaaggctgc 24097640  T

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Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 1941830 - 1941917
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||| |||||| |||||| ||  || ||||| || ||||||| ||| |||||||||||||||||||||||||||    
T  1941830 tggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 1941917  T

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Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 14553487 - 14553569
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||| |||||||||||| |||||||||  ||||||||| |||||| | |||| ||||||||||| ||||||||||||    
T  14553487 tggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaatagcttcttgtgtaaaaaatagggtaaggctg 14553569  T

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Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 17432332 - 17432395
Alignment:
Q  248 tgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||||||||||||  ||||||||| |||||||||| || |||||||||||||||||||||    
T  17432332 tgtgactgaaaggtcacaggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 17432395  T

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Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 22967149 - 22967215
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaa 299  Q
    |||||||  ||||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||    
T  22967149 taaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 22967215  T

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Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 23821244 - 23821178
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaa 299  Q
    |||||||  ||||||||||||| |||||||| |||||||||| ||||||||||||| ||||||||||    
T  23821244 taaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaacaacttcttgtgtaaaaa 23821178  T

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Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 8417447 - 8417500
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||    
T  8417447 tggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaaca 8417500  T

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Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 300
Target Start/End: Original strand, 24734598 - 24734678
Alignment:
Q  222 ttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaa 300  Q
    ||||||||| ||||||||||| |||||||||||||||||||||  ||||||| || | |||||||| || |||||||||||    
T  24734598 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctcttgtgtaaaaaa 24734678  T

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Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 232 - 302
Target Start/End: Complemental strand, 14975239 - 14975168
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaaca 302  Q
    |||||||||| ||||||||||||| |||||||||  |||||||| |||||||| | || |||||||||||||    
T  14975239 ggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctcttgtgtaaaaaaca 14975168  T

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Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 18277341 - 18277273
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||| ||||||| |||||||||| |||||| ||||||||||| | || |||||||||| ||||||||||    
T  18277341 tgtcctgtgactaaaaggtcacgggttcaaatcttggaaacagcctcttgtgtaaaaatcagggtaagg 18277273  T

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Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 27855598 - 27855510
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaactt-ctgtgt-aaaaaacagggtaaggctgcgta 317  Q
    ||||||||||  |||||||||||||||| ||| |||||| |||||  | ||||| ||| |||||| |||||| ||||||||||||||||    
T  27855598 tggtaaagtttttgtcatgtgactgaaatgtcgcgagtttaagtcccgaaaacagcttcctgtgtaaaaaaatagggtaaggctgcgta 27855510  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 313
Target Start/End: Original strand, 32068074 - 32068151
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctg 313  Q
    |||||||| ||||| ||||| ||||||||||  |||||||||||||||||  ||  ||||||||||||||| ||| ||||    
T  32068074 taaagttgttgtcacgtgaccgaaaggtcacatgttcaagtcttggaaac--ctcttgtgtaaaaaacaggataatgctg 32068151  T

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Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 6024208 - 6024295
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||| || |||||||||  ||||| || | |||||| | || ||||||||||||| |||||| |||||||    
T  6024208 tggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctcttgtgtaaaaaacatggtaagactgcgta 6024295  T

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Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 15866197 - 15866110
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| || ||||||| |||||||||| | |||||| || |||||||| | || |  |||||||||||||||| ||||||||    
T  15866197 tggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctcttaagtaaaaaacagggtaaagctgcgta 15866110  T

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Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 279
Target Start/End: Complemental strand, 13371667 - 13371625
Alignment:
Q  237 agttgatgtcatgtgactgaaaggtcacgagttcaagtcttgg 279  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||    
T  13371667 agttgttgtcatgtgacttaaaggtcacgagttcaaatcttgg 13371625  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 2755583 - 2755531
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| ||||||||||||||||||||    |||||||||||| |||||    
T  2755583 ggtaaagttgttgtcatgtgactgaaaggtcgtaggttcaagtcttgcaaaca 2755531  T

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Target: chr4 (Bit Score: 67; Significance: 9e-30; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 19027804 - 19027910
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||| |||||||||| ||||| ||||| ||||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||||||    
T  19027804 agggggagtcttgacgcaatggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaagg 19027903  T
Q  311 ctgcgta 317  Q
    |||||||    
T  19027904 ctgcgta 19027910  T

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Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 216 - 317
Target Start/End: Complemental strand, 487310 - 487208
Alignment:
Q  216 ggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    |||| ||||||| || |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||| |||||| ||||| |||||    
T  487310 ggagccttggcgtaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaaacaaggtaaagctgc 487211  T
Q  315 gta 317  Q
    |||    
T  487210 gta 487208  T

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Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 42164317 - 42164224
Alignment:
Q  222 ttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcg 315  Q
    ||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  42164317 ttggcgcaacggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctcttgtgt-aaaaacagggtaaggctgcg 42164224  T

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Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 44363292 - 44363205
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| || ||||| | || |||||||||||||||||| |||||||||    
T  44363292 tggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgta 44363205  T

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Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 6430796 - 6430699
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||||||||||    
T  6430796 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 6430699  T

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Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 16408774 - 16408676
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || |||||||||||||||||||| |||||||    
T  16408774 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcgta 16408676  T

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Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 20224948 - 20225044
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||| |||||||||| ||| |||  |||||||||||||||||||||    
T  20224948 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctct-tgtgtaaaacagggtaaggctgcgta 20225044  T

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Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 48598994 - 48598898
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  48598994 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 48598898  T

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Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 54966977 - 54967076
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||  |||||||||| |||||||||| ||||||||||||||||||||||  ||||||||  |||||| ||| || |||||||||||||||||||||    
T  54966977 agggggaaccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaagg 54967076  T

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Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 5306834 - 5306737
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||| | || ||||| |||| |||||||||| ||||||    
T  5306834 cttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaatcagggtaaggttgcgta 5306737  T

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Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 5648223 - 5648320
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||||||||||    
T  5648223 cttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 5648320  T

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Target: chr4; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 21646928 - 21647026
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||  ||||||||| |||||||| | || ||||||||||| ||||||||||||||||    
T  21646928 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaaggctgcgta 21647026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 25343144 - 25343249
Alignment:
Q  213 gggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggc 311  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||| |||||||  ||||||||  |||||| |  ||  ||||||||||||||||||||||    
T  25343144 gggggaggcttggcgcaatggtaaagttgttgtcacgtgactgataggtcacaggttcaagttctggaaatagtctcttgtgtaaaaaacagggtaaggc 25343243  T
Q  312 tgcgta 317  Q
    ||||||    
T  25343244 tgcgta 25343249  T

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Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 313
Target Start/End: Original strand, 35567141 - 35567228
Alignment:
Q  227 gcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    |||| |||||||||| |||||||| |||||||||||| | |||||||||||||||||| |  | ||||||||||||||||||||||||    
T  35567141 gcaacggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctg 35567228  T

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Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 16911526 - 16911624
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||| ||||||||| | |||||| | || |||||| ||| |||||||||||||||||    
T  16911526 cttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggctgcgta 16911624  T

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Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 30639344 - 30639441
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||| |||||||||||||||||  ||||||||| |||||||| |||  ||||| ||||||||||||||||||||||    
T  30639344 cttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgt-aaaaacagggtaaggctgcgta 30639441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 47528688 - 47528603
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  47528688 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 47528603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 17043570 - 17043467
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| |   |||||| ||||| ||||||||||||||||  ||||||||| |||||||| | || ||||||||| |||||||||||    
T  17043570 agggggagtcttggcgcaacg---aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaagg 17043474  T
Q  311 ctgcgta 317  Q
    |||||||    
T  17043473 ctgcgta 17043467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 37494826 - 37494906
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    ||||||||||| || |||| ||||||||||||||  ||||||||| |||||||||| || |||||||||||||||||||||    
T  37494826 tggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagg 37494906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 10660368 - 10660463
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    |||||||||| ||||||||||| ||||||||||||||||||| ||  ||||||||| |||||||||| || | ||||||||| |||||| ||||||    
T  10660368 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgc 10660463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 10874513 - 10874608
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    |||||||||| ||||||||||| ||||||||||||||||||| ||  ||||||||| |||||||||| || | ||||||||| |||||| ||||||    
T  10874513 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctcttatgtaaaaaatagggtatggctgc 10874608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 25463109 - 25463184
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||| ||| |||| ||||||    
T  25463109 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgta 25463184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 232 - 314
Target Start/End: Original strand, 43035224 - 43035307
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    |||||||||| ||||| ||||||||||||||||| |||||||||  ||||||||| || ||||||| ||||| |||||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctcttgtgtaagaaacacggtaaggctgc 43035307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 51420529 - 51420632
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgag-ttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||||| |||||||||| ||| |||||| ||||| |||||||||||||||   | |||||||| |||||||||| || |||||| |||||||||||||    
T  51420529 agggggagccttggcgcaacggtgaagttgttgtcacgtgactgaaaggtcagttgattcaagtcatggaaacaacctcttgtgtagaaaacagggtaag 51420628  T
Q  310 gctg 313  Q
    ||||    
T  51420629 gctg 51420632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 30496500 - 30496427
Alignment:
Q  212 agggggagacttggcgcaatggtaaa-gttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||||||||||||  ||||| |||| ||||| ||||||||||||||||| ||||||||| ||||||||    
T  30496500 agggggagacttggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaaca 30496427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 11054316 - 11054221
Alignment:
Q  222 ttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| || |||||   ||| |||  ||||||||||||| |||||||    
T  11054316 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctct-tgtgtaaaacagggtaagactgcgta 11054221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 14590801 - 14590897
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgc 314  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||  |||||||| | |||||| | || ||| | ||||||||||||||||||||    
T  14590801 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgc 14590897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 54640509 - 54640429
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaa 300  Q
    |||||||||| |||||| ||| ||||| ||| ||||||||||||| |||||||||||||||||| | || |||||||||||    
T  54640509 cttggcgcaacggtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaa 54640429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 17315457 - 17315375
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    |||||||||| ||||||||||||||||||||||| |||||| || | |||||||| || ||||| ||||||| |||||||||||    
T  17315457 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctcttgtgt-aaaaacaaggtaaggctgc 17315375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 23501757 - 23501812
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||    
T  23501757 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 40915804 - 40915890
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||  ||||||||| ||||||||| |||||||| | || ||||| ||||||| ||||||||||||||    
T  40915804 tggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacaaggtaaggctgcgta 40915890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 3581015 - 3580917
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggc 311  Q
    |||||||| ||||||||    ||||||||| |||||||||||||||| |||||||||||||||| |||||||  ||  |||||||||| || ||||||||    
T  3581015 agggggagccttggcgcggcagtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtc-tggaaac--ctcttgtgtaaaaaccatggtaaggc 3580919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 32629444 - 32629348
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgt-aaaaaacagggtaagg 310  Q
    |||||||| |||||||||| ||||||||||   ||||||||||||||||||||| |||||| || | |||||| | ||| ||| ||||||||||||||||    
T  32629444 agggggagccttggcgcaacggtaaagttg---tcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctct-tgtaaaaaaacagggtaagg 32629349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 313
Target Start/End: Original strand, 36589700 - 36589801
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| ||||||||||||||||  ||||||||| ||| |  ||||||||| |||||||| | || ||||||||||||| ||||| |    
T  36589700 agggggagccttggcgcaacggtaaagttgatgtcacatgactgaaacgtc-caggttcaagtcctggaaacagcctcttgtgtaaaaaacatggtaatg 36589798  T
Q  311 ctg 313  Q
    |||    
T  36589799 ctg 36589801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 39029220 - 39029138
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctg 313  Q
    |||||||||| |||| ||||||| ||||||||   ||||||| |||||||||| | ||| |||||||||||||||||||||||    
T  39029220 ggtaaagttgttgtcgtgtgactaaaaggtcataggttcaagccttggaaacagcctcttgtgtaaaaaacagggtaaggctg 39029138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 7385624 - 7385556
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    ||||||||||||||||||||||| ||||||| | |||||||| | || ||||||||||| |||||||||    
T  7385624 tgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaagg 7385556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 313
Target Start/End: Complemental strand, 32478942 - 32478863
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctg 313  Q
    |||||||| ||||||||||| || |||||||  ||||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgt-aaaaacagggtaaggctg 32478863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 237 - 317
Target Start/End: Complemental strand, 39077948 - 39077869
Alignment:
Q  237 agttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||| |||||||||| |||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||| ||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggttgcgta 39077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 317
Target Start/End: Original strand, 47443956 - 47444019
Alignment:
Q  255 gaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||| |||||||| | ||| | |||||||||||||||||||||||||    
T  47443956 gaaaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgta 47444019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 50856415 - 50856352
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    |||||||| |||||||||| |||||||||| |||||  ||| |||||||||||| |||||||||    
T  50856415 agggggagccttggcgcaacggtaaagttgttgtcacatgattgaaaggtcacgggttcaagtc 50856352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 54175020 - 54175125
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttgg-aaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||||| |||||||||| | ||| |||| |||||||||||||||| ||||||  |||||||| ||| ||||| | || ||||| ||||||||||||||    
T  54175020 agggggagccttggcgcaacgataa-gttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgt-aaaaacagggtaag 54175117  T
Q  310 gctgcgta 317  Q
    ||||||||    
T  54175118 gctgcgta 54175125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 54730214 - 54730312
Alignment:
Q  222 ttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||||||||| |||||||||||  |||||||||| ||||||||| | |||||| | || ||||| |||||| ||| ||||||||||||    
T  54730214 ttggcgcaatcggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaaataggataaggctgcgta 54730312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 47441699 - 47441646
Alignment:
Q  222 ttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||  |||||||||    
T  47441699 ttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtc 47441646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 49938609 - 49938513
Alignment:
Q  221 cttggcgcaatggtaaa-gttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaac-ttctgtgtaaaaaacagggtaaggctgcgt 316  Q
    |||||||||| |||||| |||| ||||| ||||||||||||||||   |||||||||||||| || | |  ||||| |||||||||||||||||||||    
T  49938609 cttggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacagattcaagtcttggaagcagcgtattgtgt-aaaaacagggtaaggctgcgt 49938513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 49938770 - 49938697
Alignment:
Q  212 agggggagacttggcgcaatggtaaa-gttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||| | |||||||| |||||| |||| ||||| ||||||||||||||||  ||||||||| ||||||||    
T  49938770 agggggagccctggcgcaacggtaaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 49938697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 310
Target Start/End: Original strand, 14983809 - 14983889
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    ||||||||||| |||||| ||| || |||||||||  |||||||||| |||||| | || ||||||||||| |||||||||    
T  14983809 tggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaagg 14983889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 317
Target Start/End: Complemental strand, 20908818 - 20908710
Alignment:
Q  211 gagggggagacttggcgcaatggtaaagttgatgtcatgtgactg-aaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaa 308  Q
    ||||||||| |||||| ||| |||||||||| ||||||||||||| ||| || ||  ||||||||| |||||||| | || | | ||||||| | |||||    
T  20908818 gagggggagccttggcacaacggtaaagttgttgtcatgtgactgaaaatgttacatgttcaagtcatggaaacatcgtcttttctaaaaaagaaggtaa 20908719  T
Q  309 ggctgcgta 317  Q
    |||||||||    
T  20908718 ggctgcgta 20908710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 317
Target Start/End: Complemental strand, 23580365 - 23580281
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||| ||||| ||||||||||||||||| ||||||||  | |||| | | || |||||||||||||||| ||| |||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctcttgtgtaaaaaacaggggaagactgcgta 23580281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 298
Target Start/End: Complemental strand, 41018941 - 41018885
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaa 298  Q
    ||||| ||||||||||||||||| ||||||||| |||||||||| || |||||||||    
T  41018941 tgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaa 41018885  T

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Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 317
Target Start/End: Complemental strand, 9832452 - 9832386
Alignment:
Q  250 tgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||||||||| ||||||||| || ||||| | ||| |||  |||||||||||||||||||||    
T  9832452 tgactgaaaggtcacgggttcaagtcctgaaaacagcctct-tgtgtaaaacagggtaaggctgcgta 9832386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 30581637 - 30581546
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaa-cagggtaagg 310  Q
    |||||||||| | |||||||| |||||  | ||| |||||||| | ||||||||| |||||||||| ||| |||||||||| ||||||||||    
T  30581637 cttggcgcaacgctaaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagg 30581546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 7038041 - 7038106
Alignment:
Q  244 gtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||||||||||||||||||  ||||||||| | |||||| |||| ||||||||||| ||||||||    
T  7038041 gtcatgtgactgaaaggtcacaggttcaagtcct-gaaacagcttcttgtgtaaaaaatagggtaag 7038106  T

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Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 286
Target Start/End: Original strand, 44357192 - 44357250
Alignment:
Q  228 caatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaac 286  Q
    |||||||||||||  ||| |||| |||||||||||| ||||||||||| | ||||||||    
T  44357192 caatggtaaagttattgttatgtaactgaaaggtcatgagttcaagtcctagaaacaac 44357250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 272
Target Start/End: Complemental strand, 5313154 - 5313113
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaa 272  Q
    ||||||||||| |||||||||| |||||||||||| ||||||    
T  5313154 tggtaaagttgttgtcatgtgattgaaaggtcacgggttcaa 5313113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 300
Target Start/End: Complemental strand, 30352762 - 30352681
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaa 300  Q
    |||||||||| ||||||||||| ||||| ||||| ||||||||||| |||  |||| |||||||| | || |||||||||||    
T  30352762 cttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctcttgtgtaaaaaa 30352681  T

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Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 6966070 - 6966126
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct 290  Q
    |||||||| |||||  ||| ||| || ||||| ||||||||||||||||||||||||    
T  6966070 taaagttgttgtcacatgagtgatagttcacgggttcaagtcttggaaacaacttct 6966126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 17079775 - 17079727
Alignment:
Q  267 gttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgc 314  Q
    |||||||||||||||||||  ||| ||||| ||||||||||||||||||    
T  17079775 gttcaagtcttggaaacaatatcttgtgtataaaacagggtaaggctgc 17079727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 30690340 - 30690292
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaa 282  Q
    |||||| | ||||| ||||||||||||||||| ||||||||| ||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaa 30690292  T

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Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 55766626 - 55766539
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcac-gagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||| | |||||||| | |||||||| |||||||||  ||| |||||   ||||||||||||||||||||    
T  55766626 tggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgt-gtaaacagggtaaggctgcgta 55766539  T

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Target: chr1 (Bit Score: 67; Significance: 9e-30; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 216 - 313
Target Start/End: Complemental strand, 18724720 - 18724622
Alignment:
Q  216 ggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||    
T  18724720 ggagacttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 18724622  T

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Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 216 - 313
Target Start/End: Original strand, 22327082 - 22327180
Alignment:
Q  216 ggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    |||| |||||||||| || ||||||| |||||||||||||||||||| || ||||||||| |||||||||| || ||||||||||||||||||||||||    
T  22327082 ggagccttggcgcaacggcaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctg 22327180  T

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Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 46248113 - 46248026
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||||||||| | || |||||||||||||||||||| |||||||    
T  46248113 tggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaagactgcgta 46248026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 46991802 - 46991885
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||||| || ||||||||||||||||||||||||    
T  46991802 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctg 46991885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 18944630 - 18944728
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||  ||||||| | |||||||| | || ||||||||||||||||||||||||||||    
T  18944630 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 18944728  T

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Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 19932923 - 19932828
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| | |||||||  ||||| ||||| | ||||||||||||||||||||||||||||    
T  19932923 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaag--ttggatacaacctttgtgtaaaaaacagggtaaggctgcgta 19932828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 30395899 - 30395801
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||  ||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  30395899 cttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 30395801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 208 - 317
Target Start/End: Complemental strand, 34725280 - 34725171
Alignment:
Q  208 actgagggggagacttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggt 306  Q
    ||||||||| |  |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  ||||||||||    
T  34725280 actgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggt 34725182  T
Q  307 aaggctgcgta 317  Q
    |||||||||||    
T  34725181 aaggctgcgta 34725171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 20036208 - 20036272
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa 285  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||    
T  20036208 cttggcgcaatggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaa 20036272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 20004252 - 20004165
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | ||| |||||||||||| ||||||||||||||    
T  20004252 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgtaaaaaacaaggtaaggctgcgta 20004165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 23768480 - 23768393
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||  ||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  23768480 tggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 23768393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 2435966 - 2435860
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaagg 310  Q
    |||||| | |||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||  || |||||| ||||| ||||||||     
T  2435966 agggggggccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtgaaaaatagggtaagc 2435867  T
Q  311 ctgcgta 317  Q
    |||||||    
T  2435866 ctgcgta 2435860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 11596500 - 11596597
Alignment:
Q  220 acttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||| | |||||||||||||||| |||||| ||||||||| | |||||||| || ||||| ||||||||||||||||||||||    
T  11596500 acttggcgcaacggtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgt-aaaaacagggtaaggctgcgta 11596597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 14617037 - 14617123
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||| | || |||||||| |||| ||||||| ||||||    
T  14617037 ggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggtaaggttgcgta 14617123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 17470525 - 17470419
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaagg 310  Q
    |||||||| ||||| |||| |||||||||| ||||| ||||||||| ||||| | ||||||||| | |||||| | ||| ||||||||||||||||||||    
T  17470525 agggggagccttggtgcaacggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctcttgtgtaaaaaacagggtaagg 17470426  T
Q  311 ctgcgta 317  Q
    |||||||    
T  17470425 ctgcgta 17470419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 32632727 - 32632630
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||||||||||    
T  32632727 cttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 32632630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 6983988 - 6983892
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaag 309  Q
    |||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||  ||||||||| |||||||| | || || ||||||||||||||||    
T  6983988 agggagagccttggcgcaatggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctc-gtataaaaaacagggtaag 6983892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 27201643 - 27201732
Alignment:
Q  229 aatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||| ||||||||||||||||||||| | ||||||||| |||||||| | || ||||| | ||||||||||||||||||||    
T  27201643 aatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggtaaggctgcgta 27201732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 44485291 - 44485182
Alignment:
Q  209 ctgagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggta 307  Q
    ||||||||||| ||||||||||  ||||||||| |||||||||| |||||||||||| |||  |||| ||||||||||  | ||||||||| ||| ||||    
T  44485291 ctgagggggagccttggcgcaacagtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggta 44485192  T
Q  308 aggctgcgta 317  Q
    ||||||||||    
T  44485191 aggctgcgta 44485182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 315
Target Start/End: Complemental strand, 15511334 - 15511226
Alignment:
Q  208 actgagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggt 306  Q
    |||| ||||||| ||||||||||||||||||||| ||| ||||| ||||||||||||   || ||||| |||||||  | || |||||||||||||||||    
T  15511334 actgtgggggagccttggcgcaatggtaaagttgttgtaatgtggctgaaaggtcacatattgaagtcctggaaaccgcctcttgtgtaaaaaacagggt 15511235  T
Q  307 aaggctgcg 315  Q
    |||||||||    
T  15511234 aaggctgcg 15511226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 311
Target Start/End: Original strand, 25290162 - 25290244
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca---acttctgtgtaaaaaacagggtaaggc 311  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    ||  ||||||||||||||||||||||    
T  25290162 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaacacagcctcttgtgtaaaaaacagggtaaggc 25290244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 317
Target Start/End: Complemental strand, 50760403 - 50760299
Alignment:
Q  214 ggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggct 312  Q
    |||||| |||||||||| |||||||| | |||||||||||||| |||||||| ||||||||| || ||||| | || |||||| ||||| ||||||||||    
T  50760403 ggggagccttggcgcaaaggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctcttgtgtataaaactgggtaaggct 50760304  T
Q  313 gcgta 317  Q
    |||||    
T  50760303 gcgta 50760299  T

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Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 41319966 - 41319879
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||  ||| ||||| ||||||||  ||  ||||||||||||||||||||||||||||    
T  41319966 tggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgta 41319879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 316
Target Start/End: Original strand, 9939463 - 9939545
Alignment:
Q  235 aaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgt 316  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||| || ||| ||| ||||| ||||||| |||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgt 9939545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 300
Target Start/End: Complemental strand, 2436072 - 2435983
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa-cttctgtgtaaaaaa 300  Q
    |||||| | ||||| |||| |||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||| || ||||||||||||    
T  2436072 agggggggccttggtgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcctgtgtaaaaaa 2435983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 231 - 315
Target Start/End: Original strand, 6925098 - 6925183
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcg 315  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||| | | || ||||||||||| ||||||||||||||    
T  6925098 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcg 6925183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 24564344 - 24564429
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||||||| ||||| ||||||||| |   ||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  24564344 gtaaagttgatgtcttgtgattgaaaggtcgcagattcaagtcttggaaacaacctcttgtgtaaaaaacagggtaagggtgcgta 24564429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 317
Target Start/End: Original strand, 50811920 - 50812025
Alignment:
Q  214 ggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggc 311  Q
    |||||| |||||||||| |||||||||| ||||| |||||||||||||||||   ||| ||| |||||||| |||| ||||| ||||||||||||||||     
T  50811920 ggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggt 50812019  T
Q  312 tgcgta 317  Q
    ||||||    
T  50812020 tgcgta 50812025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 47214499 - 47214594
Alignment:
Q  222 ttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||   ||| |||  |||||||||||||| ||||||    
T  47214499 ttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctct-tgtttaaaacagggtaaggttgcgta 47214594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 52910196 - 52910268
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||||  |||||| |||||||||||    
T  52910196 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaaca 52910268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 4430186 - 4430099
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||| ||| |||||||| |||||   || |||||||||||||||||||| |||||||    
T  4430186 tggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaacagtatcttgtgtaaaaaacagggtaagactgcgta 4430099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 22930238 - 22930148
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaagg 310  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||| ||||||||  ||| ||||| |||||||||||||||    
T  22930238 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgt-aaaaacagggtaagg 22930148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 314
Target Start/End: Original strand, 35005139 - 35005205
Alignment:
Q  249 gtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    ||||||||||||||||| |||||||||||| ||||| | || |||||||||||||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgc 35005205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 232 - 313
Target Start/End: Complemental strand, 35117927 - 35117845
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||| |||||| | | || ||||||||| ||||||||||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaatacagggtaaggctg 35117845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 27474279 - 27474332
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  27474279 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaaca 27474332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 38478451 - 38478355
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| | ||||| ||| ||||||||||||||||||||||| ||||||||| | |||||| | ||| |||  |||||||||||||||||||||    
T  38478451 cttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctct-tgtgtaaaacagggtaaggctgcgta 38478355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 317
Target Start/End: Original strand, 10668234 - 10668310
Alignment:
Q  242 atgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||| ||||||||||||||||||| ||||||||| |||||||| | || ||||||||||||| ||||||| ||||||    
T  10668234 atgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgcgta 10668310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 18742132 - 18742032
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtctt-ggaaaca-acttctgtgt-aaaaaacagggtaaggctgcgt 316  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| | |||||| |||| |||||||  ||| ||| | ||||||||||||||||||||||    
T  18742132 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggtaaggctgcgt 18742033  T
Q  317 a 317  Q
    |    
T  18742032 a 18742032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 34714610 - 34714674
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||| ||||||||    
T  34714610 cttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaaca 34714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 317
Target Start/End: Complemental strand, 39215132 - 39215032
Alignment:
Q  218 agacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgt 316  Q
    ||||||||| |||  ||||||||  ||||| |||||| ||||||| | |||||||||  |||||||||| ||| ||||||||||| ||||||||||||||    
T  39215132 agacttggcacaacagtaaagttattgtcacgtgactaaaaggtcccaagttcaagtactggaaacaacctcttgtgtaaaaaactgggtaaggctgcgt 39215033  T
Q  317 a 317  Q
    |    
T  39215032 a 39215032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 25554897 - 25554827
Alignment:
Q  216 ggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaac 286  Q
    |||| ||||||||||||||||||||| ||||| |||||| ||||| |||| ||| ||||| ||||||||||    
T  25554897 ggagccttggcgcaatggtaaagttgttgtcacgtgactaaaaggccacgtgtttaagtcctggaaacaac 25554827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 34679398 - 34679292
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    ||||||||  ||||||||| |||||||||  ||||||||||||||||  ||||  |||| | || | |||||||| || ||||||||||||||||||||     
T  34679398 agggggagctttggcgcaacggtaaagttattgtcatgtgactgaaatatcacatgttccattcctagaaacaacctcttgtgtaaaaaacagggtaaga 34679299  T
Q  311 ctgcgta 317  Q
    |||||||    
T  34679298 ctgcgta 34679292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 12127006 - 12126910
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| | ||||||||| |||||||| | |||||||||||| ||| ||||  |||||||| ||||| |||  |||||||||||||||||||||    
T  12127006 cttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttct-tgtgtaaaacagggtaaggctgcgta 12126910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 27136822 - 27136725
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||| ||| |||||||||| ||||| |||| || |||| |||||||||||||  ||| |||||| || ||||||||||||| ||||||| ||||||    
T  27136822 cttggcacaacggtaaagttgttgtcacgtgattggaaggacacgagttcaagttctgggaacaacctcttgtgtaaaaaacatggtaaggttgcgta 27136725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 31272523 - 31272448
Alignment:
Q  242 atgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||| ||||||||||||||||  ||||||||| |||||||||| || ||||| ||||||| ||||||||||||||    
T  31272523 atgtcacgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgt-aaaaacatggtaaggctgcgta 31272448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 8197041 - 8197128
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||| |||||| ||||||||||||||||||||||| ||||||||| ||| ||   | || ||||||||||||| ||||||||| ||||    
T  8197041 tggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggtaattgcctcttgtgtaaaaaacatggtaaggctacgta 8197128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 19701549 - 19701648
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| ||||||||||  ||||||||| |||| ||||||||||| |||||| ||| ||||| || ||||| | || ||||||||||||  |||||||    
T  19701549 agggggagccttggcgcaacagtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctcttgtgtaaaaaacttggtaagg 19701648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 275
Target Start/End: Original strand, 40424729 - 40424784
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||| |||||||||    
T  40424729 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtc 40424784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 10378904 - 10378834
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaa 282  Q
    ||||| || ||||| |||| |||||||||| ||||| ||||||||||||| ||| ||||||||| ||||||    
T  10378904 aggggaagccttggtgcaacggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 33222983 - 33223068
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||||||||||||||||||||||  || ||||| |||||||| | || ||||| |||||||||| |||| ||||||    
T  33222983 ggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgt-aaaaacagggaaaggttgcgta 33223068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 19414437 - 19414481
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||    
T  19414437 tggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtc 19414481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 45812706 - 45812642
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| || |||||||| ||||||||||||||||||||||  ||||||||| || |||||    
T  45812706 cttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 45812642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 35019218 - 35019312
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    |||||||||| |||||||||| |||||  |||||||||||||||   |||||||| || ||||||| || ||| |||||| |||  |||||||||    
T  35019218 cttggcgcaacggtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgc 35019312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 317
Target Start/End: Complemental strand, 35253329 - 35253260
Alignment:
Q  247 atgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||| ||||| ||||||||| | |||||| | ||| |||  |||||||||||||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctct-tgtgtaaaacagggtaaggctgcgta 35253260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Original strand, 43768167 - 43768209
Alignment:
Q  242 atgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||    
T  43768167 atgtcatgtcactgaaaggtcacgggttcaagtcctggaaaca 43768209  T

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Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 6358113 - 6358186
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa 285  Q
    |||||||| |||||||||| |||||| ||| | |||  |||||||||||||||  |||||| |||||| |||||    
T  6358113 agggggagccttggcgcaacggtaaatttgttttcacatgactgaaaggtcacaggttcaaatcttgggaacaa 6358186  T

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Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 7210659 - 7210626
Alignment:
Q  1 ttagtacaaaatattgtcaaatagtgactatagc 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  7210659 ttagtacaaaatattgtgaaatagtgactatagc 7210626  T

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Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 313
Target Start/End: Complemental strand, 45264542 - 45264477
Alignment:
Q  249 gtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    |||| |||||||||||  ||||||||| |||||||||| || |||| ||||||||| |||||||||    
T  45264542 gtgattgaaaggtcacatgttcaagtcctggaaacaacctcttgtgcaaaaaacagagtaaggctg 45264477  T

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Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 18335459 - 18335395
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| || |||||||  ||||||||| |||||||||||| |||| ||||| ||||||||    
T  18335459 cttggcgcaagtgataaagtttttgtcatgtgtctgaaaggtcacaagttaaagtcctggaaaca 18335395  T

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Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 19974221 - 19974181
Alignment:
Q  244 gtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||| ||||||||||| ||||| ||||||||||||||||||    
T  19974221 gtcacgtgactgaaagatcacgggttcaagtcttggaaaca 19974181  T

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Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 45402082 - 45402145
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| ||||||||||| |||||||||| || ||||| ||| ||||||||| ||||||||    
T  45402082 cttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaaca 45402145  T

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Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 210 - 317
Target Start/End: Original strand, 26573103 - 26573211
Alignment:
Q  210 tgagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaa 308  Q
    |||||||||  |||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||| ||||||||  || ||||||||||||||||||||    
T  26573103 tgagggggacccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaa 26573202  T
Q  309 ggctgcgta 317  Q
    |||||||||    
T  26573203 ggctgcgta 26573211  T

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Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 40272999 - 40272885
Alignment:
Q  205 attactgagggggagacttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaaca 302  Q
    |||||||||||| |  |||||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||| |||||||||| || |||||||||||||    
T  40272999 attactgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaaca 40272900  T
Q  303 gggtaaggctgcgta 317  Q
    |||||||||||||||    
T  40272899 gggtaaggctgcgta 40272885  T

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Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 8247860 - 8247762
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| ||||||    
T  8247860 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgta 8247762  T

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Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 34420823 - 34420717
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||| | ||||||||||  ||||||||| ||||| ||||||||||||||||| ||||||||| |||||||| | || |||||||||||||||||||||    
T  34420823 agggggggccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagg 34420724  T
Q  311 ctgcgta 317  Q
    |||||||    
T  34420723 ctgcgta 34420717  T

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Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 45621015 - 45620901
Alignment:
Q  205 attactgagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaaca 302  Q
    |||| |||||||||| |||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||  |||||||| | || ||||| ||||||||    
T  45621015 attaatgagggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaaca 45620916  T
Q  303 gggtaaggctgcgta 317  Q
    |||||||||||||||    
T  45620915 gggtaaggctgcgta 45620901  T

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Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 46421208 - 46421110
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  46421208 cttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 46421110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 53996743 - 53996642
Alignment:
Q  214 ggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggct 312  Q
    |||||| |||||||| | |||||| ||| |||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||||||||    
T  53996743 ggggagccttggcgctacggtaaatttgttgtcatttgactgaaaggtcacgtgttcaagtcgtggaaacaacctcttgtgtaaaaaacagggtaaggct 53996644  T
Q  313 gc 314  Q
    ||    
T  53996643 gc 53996642  T

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Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 10870122 - 10870025
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||||||||||    
T  10870122 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 10870025  T

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Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 13730775 - 13730681
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||    
T  13730775 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 13730681  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 22609753 - 22609849
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||||||||| ||||||||||||| ||||| ||| |||||||||||||||||| | || ||||| ||||||||||||||||||||||    
T  22609753 cttggcgcaacggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 22609849  T

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Target: chr3; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 235 - 317
Target Start/End: Complemental strand, 13628948 - 13628865
Alignment:
Q  235 aaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||||||| ||||||||||||||||||||    
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggtaaggctgcgta 13628865  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 29366882 - 29366795
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||| |||||||| | || ||| ||||||||||||||||||||||||    
T  29366882 tggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgta 29366795  T

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Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 12914206 - 12914108
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||| ||||||| |||||||||| |||||||||| |||||||| | || |||||||||||||||||||||| |||||    
T  12914206 cttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcggcgta 12914108  T

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Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 305
Target Start/End: Original strand, 35417894 - 35417988
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacaggg 305  Q
    |||||||| |||||||||| |||||||||| | |||||||||||| ||||||||||||||| || |||||||| | || ||||||||||||||||    
T  35417894 agggggagccttggcgcaacggtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctcttgtgtaaaaaacaggg 35417988  T

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Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 516418 - 516491
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcg 315  Q
    ||||||||||||||||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||||    
T  516418 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcg 516491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 212 - 307
Target Start/End: Original strand, 53062016 - 53062112
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggta 307  Q
    ||||||||  ||||||||  |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||  || |||||| ||||||||||||    
T  53062016 agggggaggattggcgcatcggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctcctgtgtcaaaaacagggta 53062112  T

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Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 26869704 - 26869790
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||| |||||||| | ||| |||| ||||||||||||||||||||||    
T  26869704 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgt-aaaaacagggtaaggctgcgta 26869790  T

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Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 9607189 - 9607287
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| | ||||||||| |||||||||||||||||||||   ||||||||| |||||||| | || || |||||||||||||||||||||||||    
T  9607189 cttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgta 9607287  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 45139624 - 45139554
Alignment:
Q  245 tcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    ||||||||||||||||||||| |||||||| ||||||||||| || ||||||||| |||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgc 45139554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 245 - 314
Target Start/End: Complemental strand, 54032705 - 54032635
Alignment:
Q  245 tcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    ||||||||||| ||||||||| ||||||||| |||||||||| || |||||||||||||||||||||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgc 54032635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 1217076 - 1217172
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||||||||||  ||||||| |||||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  1217076 cttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 1217172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 7697056 - 7696960
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||| ||||||||| ||||||||   ||| |||  |||||||||||||||||||||    
T  7697056 cttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctct-tgtgtaaaacagggtaaggctgcgta 7696960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 249 - 317
Target Start/End: Complemental strand, 54374488 - 54374419
Alignment:
Q  249 gtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||  |||||||||||||||||||| || ||||||||||| ||||||||||||||||    
T  54374488 gtgactgaaaggtcacaggttcaagtcttggaaacaacctcttgtgtaaaaaatagggtaaggctgcgta 54374419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 4495824 - 4495737
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| || ||| |  ||  ||||||||||||||||||||||||||||    
T  4495824 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaaggctgcgta 4495737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 16735427 - 16735524
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgta-aaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| || |||||| ||||||||| | |||||| | ||| |||| ||||||||||||||||||||||    
T  16735427 cttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctct-tgtagaaaaacagggtaaggctgcgta 16735524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 5173876 - 5173811
Alignment:
Q  235 aaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaa 299  Q
    ||||||| ||||||||||||||||||||||| ||||||||| |||||||||| || ||||||||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaa 5173811  T

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Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 45949017 - 45948914
Alignment:
Q  215 gggagacttggcgcaatggtaaagttgatgtcatgtgactga---aaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    ||||| |||||||||| ||| |||||| | ||||||||||||   ||||||||| |||||| || |||||||||| || ||||||||||| |||||||||    
T  45949017 gggagccttggcgcaacggtgaagttgttttcatgtgactgaaggaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaatagggtaagg 45948918  T
Q  311 ctgc 314  Q
    ||||    
T  45948917 ctgc 45948914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 313
Target Start/End: Original strand, 25944449 - 25944549
Alignment:
Q  214 ggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggct 312  Q
    |||||| ||||||||||  ||||||||| ||||| ||||||||||||||| | ||||||||| |||||||  | ||| ||||||||||| ||| ||||||    
T  25944449 ggggagccttggcgcaacagtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctctcgtgtaaaaaactgggcaaggct 25944548  T
Q  313 g 313  Q
    |    
T  25944549 g 25944549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 30928295 - 30928227
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    ||||||||||||||||||||||| ||||||||| |||||||| | || ||||||||||||| |||||||    
T  30928295 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaagg 30928227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 52926381 - 52926317
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||    
T  52926381 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 52926317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 6411981 - 6411895
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||| ||||| |||||| | |||||||||||| ||||| | || ||||| ||||||||||||||||||||||    
T  6411981 tggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 6411895  T

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Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 22123075 - 22122990
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||| ||| |||||||||||||||||||| || ||||||||| ||||||||   ||| |||  |||||||||||||||||||||    
T  22123075 tggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctct-tgtgtaaaacagggtaaggctgcgta 22122990  T

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Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 317
Target Start/End: Original strand, 7942993 - 7943074
Alignment:
Q  237 agttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||| ||||||||||||| |||||||||  |||||||| |||||||| | || ||| |||||||||||||||| |||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcatcttgtctaaaaaacagggtaagactgcgta 7943074  T

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Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 39203515 - 39203598
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||||||||||||||||||||||  ||||||||| | |||||| | ||| |||  |||||||||||||| ||||||    
T  39203515 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctct-tgtgtaaaacagggtaaggttgcgta 39203598  T

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Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 12525396 - 12525489
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcg 315  Q
    |||||||||| |||||||||||   |||| |||||||||||||||  |||| |||| |||||||| | || |||||||||| |||||||||||||||    
T  12525396 cttggcgcaactggtaaagttg---tcatatgactgaaaggtcacaggttcgagtcctggaaacagcctcttgtgtaaaaatcagggtaaggctgcg 12525489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 8411013 - 8410943
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgc 314  Q
    ||||||| ||||||||||||||  ||||| ||| |||||||  | || ||||||||||||||||||||||||    
T  8411013 tgtcatgggactgaaaggtcaccggttcaggtcctggaaactgcctc-gtgtaaaaaacagggtaaggctgc 8410943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 14986990 - 14987041
Alignment:
Q  267 gttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| |||||||| | ||| |||||||||||||||||||||||||||    
T  14986990 gttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 14987041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 39212003 - 39212074
Alignment:
Q  247 atgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||||| |||||| ||||||||| |||||| ||| || |||||||| |||| |||||| |||||||    
T  39212003 atgtgactgaaatgtcacgggttcaagtcctggaaataacctcttgtgtaaataacaaggtaagactgcgta 39212074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 1121404 - 1121326
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct 290  Q
    |||||||| ||||||||||   |||| ||| ||||  ||| ||||||||||||| ||| ||||| ||||||||||||||    
T  1121404 agggggagccttggcgcaacactaaatttgttgtccggtggctgaaaggtcacgtgtttaagtcctggaaacaacttct 1121326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Complemental strand, 21330424 - 21330379
Alignment:
Q  214 ggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaag 259  Q
    |||||| ||||||||||||||||||| | |||||||||||| ||||    
T  21330424 ggggagccttggcgcaatggtaaagtggttgtcatgtgacttaaag 21330379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 313
Target Start/End: Original strand, 33926094 - 33926162
Alignment:
Q  245 tcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||||||||||| | ||||||||| |||||| | | || ||||| ||||||||||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgt-aaaaacagggtaaggctg 33926162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 262 - 317
Target Start/End: Complemental strand, 10795554 - 10795498
Alignment:
Q  262 cacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    |||| ||||||||| |||||||| | ||| |||||||| ||||||||||||||||||    
T  10795554 cacgggttcaagtcctggaaacagcctcttgtgtaaaagacagggtaaggctgcgta 10795498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 25517344 - 25517300
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcac 264  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||    
T  25517344 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 44530113 - 44530211
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||  ||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  44530113 cttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 44530211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 313
Target Start/End: Complemental strand, 44781685 - 44781583
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| |||||||||| ||||| ||||||||||| ||||| ||||||||| |||||||||| || ||||||||| |||||||||||    
T  44781685 agggggagccttggcgcaacggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctcttgtgtaaaagacagggtaagg 44781586  T
Q  311 ctg 313  Q
    |||    
T  44781585 ctg 44781583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 28817786 - 28817699
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  28817786 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 28817699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 36720771 - 36720858
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||||||    
T  36720771 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 36720858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 7136700 - 7136602
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||| | ||||||||| |||||||||| || |||||||||| |||||||||||||||||    
T  7136700 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaaggctgcgta 7136602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 39461167 - 39461069
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||| | || |||||||||||||| |||||||||||||    
T  39461167 cttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgta 39461069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 12670419 - 12670323
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  12670419 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 12670323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 313
Target Start/End: Complemental strand, 20869667 - 20869575
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctg 313  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||||||    
T  20869667 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctg 20869575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 30454266 - 30454170
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  |||||| ||||||||||||||    
T  30454266 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacaaggtaaggctgcgta 30454170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 30962943 - 30962847
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgt 316  Q
    |||||||||| || ||||||| |||||||||| ||||||||||||| |||||||| |||||||| | || ||||||||||| ||||| |||||||||    
T  30962943 cttggcgcaacggaaaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctcttgtgtaaaaaatagggttaggctgcgt 30962847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 317
Target Start/End: Original strand, 6760785 - 6760884
Alignment:
Q  220 acttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||| |||||| |||||  ||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||| ||||    
T  6760785 acttggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggcttcgta 6760884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 14018148 - 14018042
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| ||||| |||| ||||| |||| |||||||||| | ||||||||||||||||||  ||  ||||||||||||||||| ||     
T  14018148 agggggagccttggcgcaacggtaatgttgttgtcacgtgattgaaaggtcatgggttcaagtcttggaaacagtctcttgtgtaaaaaacagggtgaga 14018049  T
Q  311 ctgcgta 317  Q
    |||||||    
T  14018048 ctgcgta 14018042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 17823540 - 17823638
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||| | || |||||||||| |||| |||| |||||||    
T  17823540 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggataagactgcgta 17823638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 22598128 - 22598214
Alignment:
Q  227 gcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggct 312  Q
    |||| |||||||||| |||||  |||||||||||||||| |||||| || |||||||||| || |||||||||||||||||||||||    
T  22598128 gcaacggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctcttgtgtaaaaaacagggtaaggct 22598214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 29521856 - 29521758
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| || |||||||| |||| |||||||| ||||||||| ||||||||| |||||||| | ||| || ||||||||||||||||||||||||    
T  29521856 cttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaaggctgcgta 29521758  T

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Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 35261643 - 35261741
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||| | ||||||||  ||  ||||||||||||||||||||| ||||||    
T  35261643 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaaggttgcgta 35261741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 42083878 - 42083772
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaagg 310  Q
    |||| ||| |||||||||| |||||| ||| ||||| ||||||||||||||||| ||||||||| ||||||||  ||| |||||||||||  ||| ||||    
T  42083878 agggagagccttggcgcaacggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatggggcaagg 42083779  T
Q  311 ctgcgta 317  Q
    |||||||    
T  42083778 ctgcgta 42083772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 44742698 - 44742592
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa-cttctgtgtaaaaaacagggtaagg 310  Q
    |||||||  ||||| |||| |||||||||| ||||  |||| || ||||||| ||||||||||  ||||||||| || ||||||||||||||||||||||    
T  44742698 agggggaaccttggtgcaacggtaaagttgttgtcgcgtgattgtaaggtcatgagttcaagttctggaaacaatctcctgtgtaaaaaacagggtaagg 44742599  T
Q  311 ctgcgta 317  Q
    |||||||    
T  44742598 ctgcgta 44742592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 28407380 - 28407471
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggc 311  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||||    
T  28407380 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggc 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 2626483 - 2626584
Alignment:
Q  221 cttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt---aaaaaacagggtaaggctgcg 315  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||| |||||||| | || |||||   ||||||||||||||| |||||    
T  2626483 cttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagggtaagactgcg 2626582  T
Q  316 ta 317  Q
    ||    
T  2626583 ta 2626584  T

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Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 13160677 - 13160763
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| | |||||| | || ||||| ||||||||||||||||||||||    
T  13160677 tggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 13160763  T

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Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 317
Target Start/End: Complemental strand, 18164914 - 18164833
Alignment:
Q  236 aagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||| ||||||    
T  18164914 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggttgcgta 18164833  T

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Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 20284232 - 20284144
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt--aaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||| |  |||||| ||||||||||||||||    
T  20284232 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaaggctgcgta 20284144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 21070861 - 21070809
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  21070861 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 21070809  T

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Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 24245426 - 24245478
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaac 283  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  24245426 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

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Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 26954107 - 26954195
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||| |  ||||||||| ||||||||| |||||||| | || ||||| |||||||||||||||||||||||    
T  26954107 tggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgta 26954195  T

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Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 8897924 - 8897837
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||| | ||||||||| ||| ||||| ||||||||||  | ||||||||||| ||||||||||| ||||    
T  8897924 tggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggctacgta 8897837  T

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Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 25250497 - 25250584
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||| ||||||||  ||||||||| ||||||||  ||  ||||||||||| |||||| |||||||||    
T  25250497 tggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggtatggctgcgta 25250584  T

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Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 35105902 - 35105985
Alignment:
Q  235 aaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||| ||||| ||| ||||||||||||| ||||||||| |||||||||| || ||||||||| | || |||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaagagagtgtaaggctgcgta 35105985  T

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Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 45071240 - 45071326
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||| || ||||||||| ||||||||  |||||||| | || ||||| ||||||||||||||||||||||    
T  45071240 tggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 45071326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 8484108 - 8484011
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| |||||||  | || || |||||| ||| |||| | ||||||||| |||||||||| ||| ||||||||||||||| |||||||||||    
T  8484108 cttggcgcaacggtaaagcggttgccacgtgacttaaatgtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggcaaggctgcgta 8484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 309
Target Start/End: Original strand, 11748286 - 11748353
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||||||||||||| |||||| |||||||||||||||||| | || | |||||||| |||||||||    
T  11748286 tgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttttgtaaaaagcagggtaag 11748353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 315
Target Start/End: Complemental strand, 24365218 - 24365134
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaa-cagggtaaggctgcg 315  Q
    ||||||||| |||||||||||| ||| |||||| ||||||| | | |||||| | || ||||||||||| |||||||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcg 24365134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 299
Target Start/End: Original strand, 31457155 - 31457217
Alignment:
Q  238 gttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaa 299  Q
    |||| ||||||||| ||||||||||||| ||||||||| || ||||||| || ||||||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaa 31457217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 36918120 - 36918182
Alignment:
Q  252 actgaaaggtcacgagttcaagtcttggaaacaacttctg-tgtaaaaaacagggtaaggctg 313  Q
    |||||||||||||  ||||||||  ||||||||| ||||  ||||||||||||||||||||||    
T  36918120 actgaaaggtcacatgttcaagttctggaaacaatttcttatgtaaaaaacagggtaaggctg 36918182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Original strand, 12625864 - 12625949
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgc 314  Q
    ||||||||||| |||| |||||||   |||||||| | ||||||| |||||||||| || ||||| ||||||||||||||| ||||    
T  12625864 tggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgc 12625949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 39301079 - 39301185
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| |||||||||| |||||||| |||||||||||||| ||||||||||||| |||||| || |||||| ||||||||||||||    
T  39301079 agggggagccttggcgcaacggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaacctcttgtgtataaaacagggtaagg 39301178  T
Q  311 ctgcgta 317  Q
     ||||||    
T  39301179 atgcgta 39301185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 221 - 315
Target Start/End: Original strand, 23974745 - 23974840
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcg 315  Q
    |||||||||| |||||||||| ||||||||||||| ||||||||| ||||||||| |||||||||| || ||||||||||| ||||||||||||||    
T  23974745 cttggcgcaacggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaagagggtaaggctgcg 23974840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 38879545 - 38879643
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | || ||| ||||||||||||||||||||||||    
T  38879545 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaaggctgcgta 38879643  T

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Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 43334166 - 43334265
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgt-aaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||  || |||||| |||||||||||||||||||||||    
T  43334166 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaaggctgcgta 43334265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 4619277 - 4619179
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||| | | || ||||||||||||||||||||||||||||    
T  4619277 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggctgcgta 4619179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 24448854 - 24448952
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||  ||| ||||||||||| ||||||||||||||||    
T  24448854 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaaggctgcgta 24448952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 314
Target Start/End: Complemental strand, 209106 - 209004
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||  |||||||||| |||||||||||| ||||||||| |||||||||| ||| |||||| || ||||| |||||||||||||||    
T  209106 agggggagccttggcgcagcggtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgt-aaaaacagggtaagg 209008  T
Q  311 ctgc 314  Q
    ||||    
T  209007 ctgc 209004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 27328727 - 27328814
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||  ||  ||||||||||||||||||||||||||||    
T  27328727 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacagggtaaggctgcgta 27328814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 37024714 - 37024629
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  37024714 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 37024629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 41014283 - 41014380
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||| ||||||||||||||||||||||    
T  41014283 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgt-aaaaacagggtaaggctgcgta 41014380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 8170153 - 8170057
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||  ||| |||||  |||||||||||||||||||||    
T  8170153 cttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgtgt--aaaacagggtaaggctgcgta 8170057  T

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Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 28516593 - 28516507
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||| ||| ||||||||||||| |||||||||||||||||| | || ||||||||||||||| || |||||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctcttgtgtaaaaaacaggctagggctgcgta 28516507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 39079945 - 39079875
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaa 282  Q
    |||| ||| |||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  39079945 agggtgagccttggcgcaacggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 248 - 317
Target Start/End: Complemental strand, 42924977 - 42924907
Alignment:
Q  248 tgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||||||||||||||||||||| || ||||||| || ||||||||||||||||||||| ||||||    
T  42924977 tgtgactgaaaggtcacgagttcaagtcctgaaaacaacatcttgtgtaaaaaacagggtaaggttgcgta 42924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 316
Target Start/End: Original strand, 35710277 - 35710372
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgt 316  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||| |||||||| | ||| |||  |||| |||||||||||||||    
T  35710277 cttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaatagggtaaggctgcgt 35710372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 1565395 - 1565461
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaac 286  Q
    |||||||||| ||||||||||| |||||||||||||||||||| || ||||||||| ||||||||||    
T  1565395 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaac 1565461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 216 - 317
Target Start/End: Complemental strand, 19143117 - 19143016
Alignment:
Q  216 ggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgc 314  Q
    |||| ||||||||||||||||| ||| ||||| |||||| ||| | |||  ||||||||| |||||||||| || ||||| |||||||||||||||||||    
T  19143117 ggagccttggcgcaatggtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaaggctgc 19143019  T
Q  315 gta 317  Q
    |||    
T  19143018 gta 19143016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 32703411 - 32703484
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 32703484  T

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Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 10634321 - 10634224
Alignment:
Q  216 ggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggct 312  Q
    |||| |||||||||| ||| |||||| ||||| ||||||||||||||| | ||||||||| | |||||||| || |||| ||||| ||||||||||||    
T  10634321 ggagccttggcgcaacggtgaagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctcgtgtgcaaaaatcagggtaaggct 10634224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 2838754 - 2838840
Alignment:
Q  232 ggtaaagttgatgtcatgtgactg-aaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||  |||||| | ||| |||||||| ||||||||||||||||||    
T  2838754 ggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaa-acagggtaaggctgcgta 2838840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 22600429 - 22600512
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa-cttctgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||| | ||||||||||| ||||| ||| ||||||||| |||||||||  || ||||||||| ||||||||||||||    
T  22600429 tggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggtaaggctg 22600512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 22025538 - 22025601
Alignment:
Q  251 gactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||||| | ||||||||| |||||||| | ||| |||||||||||||||||||||||    
T  22025538 gactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 22025601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 43574553 - 43574668
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaa---------ggtcacgagttcaagtcttggaaacaa-cttctgtgtaaaaaac 301  Q
    ||||| || |||||||||||| |||||||| ||||| ||||||||||         ||||||| ||||||||| ||||||||| ||  |||||| |||||    
T  43574553 aggggtagccttggcgcaatgataaagttgttgtcacgtgactgaaaggtcacttcggtcacgtgttcaagtcctggaaacaatctcttgtgtagaaaac 43574652  T
Q  302 agggtaaggctgcgta 317  Q
    ||||||||||||||||    
T  43574653 agggtaaggctgcgta 43574668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 12006485 - 12006408
Alignment:
Q  236 aagttgatgtcatgtgactgaaaggtcac-gagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggct 312  Q
    |||||| |||||||||||||||||||||| | ||||||||| |||||||||| || | ||||||||| |||||||||||    
T  12006485 aagttgttgtcatgtgactgaaaggtcacggggttcaagtc-tggaaacaacctcttatgtaaaaaatagggtaaggct 12006408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 17419889 - 17419942
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||| ||| ||| ||||||||||||||| ||||||||||||| ||||||||    
T  17419889 tggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtcctggaaaca 17419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 22187262 - 22187347
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| |||||| |||||||||||||||  ||| ||||| |||||||| | || ||||||||||||| | |||| |||||||    
T  22187262 gtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctcttgtgtaaaaaacatgataagactgcgta 22187347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 24313732 - 24313680
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaac 286  Q
    |||||||| |||||  |||||||||||||| | ||||||||||||||||||||    
T  24313732 taaagttgttgtcacatgactgaaaggtcatgtgttcaagtcttggaaacaac 24313680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 286
Target Start/End: Complemental strand, 24356069 - 24356017
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaac 286  Q
    |||||||| |||||  |||||||||||||| | ||||||||||||||||||||    
T  24356069 taaagttgttgtcacatgactgaaaggtcatgtgttcaagtcttggaaacaac 24356017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 314
Target Start/End: Original strand, 41425952 - 41426007
Alignment:
Q  260 gtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgc 314  Q
    |||||| ||||||||  |||||||||||| | ||||||||||||||||||||||||    
T  41425952 gtcacgggttcaagttctggaaacaacttattgtgtaaaaaacagggtaaggctgc 41426007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 299
Target Start/End: Original strand, 1850627 - 1850684
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaa 299  Q
    ||||||||||||||||||||||| |||||||||  ||||| ||| || ||||||||||    
T  1850627 tgtcatgtgactgaaaggtcacgggttcaagtcccggaaataacctcttgtgtaaaaa 1850684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 275
Target Start/End: Complemental strand, 22861823 - 22861782
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    |||||||| |||||||||||||||||||||||  ||||||||    
T  22861823 taaagttgttgtcatgtgactgaaaggtcacggattcaagtc 22861782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 31299607 - 31299660
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||| | ||||||    
T  31299607 tggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaaca 31299660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 34074717 - 34074636
Alignment:
Q  236 aagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgt 316  Q
    |||||| |||||  ||||||||||||||| |||||||||| | |||||| | || |||||||||||||  |||||| |||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctcttgtgtaaaaaacacagtaaggttgcgt 34074636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 46354158 - 46354256
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||||||| || ||||||||| ||||||||| |||||||||| || ||||||||||||||||||||||||||||    
T  46354158 cttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcgta 46354256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 2541191 - 2541092
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactg-aaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||| |||||||| | ||| |||||||||||||||||||||||||||    
T  2541191 cttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 2541092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 11617748 - 11617661
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||| || |||||||||||||||||||| |||||||    
T  11617748 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgta 11617661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 23419853 - 23419747
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| |||||||||| |||||||||||| |||||||||  ||||||||  |||||||| | || ||||||||||||||||||||     
T  23419853 agggggagccttggcgcaacggtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaaga 23419754  T
Q  311 ctgcgta 317  Q
    |||||||    
T  23419753 ctgcgta 23419747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 42798633 - 42798731
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||  ||  ||||||||||||| ||||||||||||||    
T  42798633 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaaggctgcgta 42798731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 211 - 282
Target Start/End: Original strand, 13805057 - 13805128
Alignment:
Q  211 gagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaa 282  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||    
T  13805057 gagggggagccttggcgcaatggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 313
Target Start/End: Original strand, 42805499 - 42805582
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||||| ||||||||||||| ||||||||| ||||||||| |||||||| | || ||||||||||||||||||||||||    
T  42805499 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctg 42805582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 43557447 - 43557534
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||| |||||||| | || |||||||||||||| |||||||||||||    
T  43557447 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagtaaggctgcgta 43557534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 27629598 - 27629696
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||| |||| ||||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| ||||||    
T  27629598 cttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgta 27629696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 48735292 - 48735195
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagt-cttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||| |||  |||||| ||||||||||||||    
T  48735292 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctct-tgtgtaaaacacggtaaggctgcgta 48735195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 222 - 317
Target Start/End: Complemental strand, 19427059 - 19426962
Alignment:
Q  222 ttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||||||||||| ||||||||||| ||||||||||| ||||||||| |||||||| | || ||||||||||| |||||||| |||||||    
T  19427059 ttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgta 19426962  T

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Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 21172178 - 21172082
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||| ||||||||| |||||||| | ||| |||  |||||||||||||||||||||    
T  21172178 cttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctgcgta 21172082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 35334985 - 35334897
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaag 309  Q
    |||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||   || |||||||||||||||||||    
T  35334985 cttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctc-gtgtaaaaaacagggtaag 35334897  T

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Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 214 - 309
Target Start/End: Original strand, 7644914 - 7645010
Alignment:
Q  214 ggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    |||||| ||||||||| ||||||| ||| ||| | ||||||||||||||||| ||||||||| |||||||| | || ||||||||||||||||||||    
T  7644914 ggggagccttggcgcagtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 7645010  T

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Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 33872069 - 33871983
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||||||||||||| || ||||||||| |||||||||| || ||||| ||||||||| ||||||||||||    
T  33872069 tggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgt-aaaaacaggataaggctgcgta 33871983  T

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Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 42391251 - 42391173
Alignment:
Q  238 gttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||| ||||| |||  |||||||||||||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttct-tgtgtaaaacagggtaaggctgcgta 42391173  T

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Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 47716438 - 47716521
Alignment:
Q  235 aaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||| || |||||||||| ||||||||| ||||||||| |||||||| | ||| |||||||||||||||||||||||||||    
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgta 47716521  T

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Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 28362324 - 28362218
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| |||||||||| |||||||||| ||||||||| ||||||||||||  ||||||||| | |||||  | || ||||||||||||  |||||||    
T  28362324 agggggagccttggcgcaacggtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaagg 28362225  T
Q  311 ctgcgta 317  Q
    |||||||    
T  28362224 ctgcgta 28362218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 10693242 - 10693146
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| | ||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  |||| ||||||||||||||||    
T  10693242 cttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaagagggtaaggctgcgta 10693146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 316
Target Start/End: Complemental strand, 14732993 - 14732896
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgt 316  Q
    |||||||||| ||||||||||| |||||||||||||||| |||| | ||||||||| ||||||||  || |  |||||||||||||||||||||||||    
T  14732993 cttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctcccatgtaaaaaacagggtaaggctgcgt 14732896  T

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Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 317
Target Start/End: Original strand, 19265772 - 19265876
Alignment:
Q  213 gggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggc 311  Q
    |||||||  ||||||||| |||||||||| ||||| ||||||||||||||||| |||||||||||||| ||| |  | ||||| ||||| ||||||||||    
T  19265772 gggggagcattggcgcaacggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgt-aaaaagagggtaaggc 19265870  T
Q  312 tgcgta 317  Q
    ||||||    
T  19265871 tgcgta 19265876  T

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Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 32758225 - 32758317
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctg 313  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||| |||||||| | ||| |||  |||||||||||||||||    
T  32758225 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctct-tgtgtaaaacagggtaaggctg 32758317  T

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Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 48123663 - 48123566
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaa 308  Q
    |||||||| |||||||||| |||||||||| | ||||||| ||||||||||| | ||||||||| |||||||| | || |||||||| ||||||||||    
T  48123663 agggggagccttggcgcaacggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaa 48123566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 47078024 - 47077960
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||    
T  47078024 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47077960  T

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Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 310
Target Start/End: Complemental strand, 42496006 - 42495916
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgta-aaaaacagggtaagg 310  Q
    |||||||||| ||||||||||| |||||| |||||||||||||||| ||||||||| |||||||| | ||| |||| |||||||||||||||    
T  42496006 cttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtataaaaacagggtaagg 42495916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 19266406 - 19266512
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||  | ||||||||| || ||| | |  | || ||||||||||||||||||    
T  19266406 agggggagccttggtgcaacggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaagg 19266505  T
Q  311 ctgcgta 317  Q
    |||||||    
T  19266506 ctgcgta 19266512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 313
Target Start/End: Original strand, 7193062 - 7193143
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    ||||||||| ||||||||||||||||||||||| ||||||||| | |||||||| || |||||||| || | ||||||||||    
T  7193062 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaacaatatggtaaggctg 7193143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 317
Target Start/End: Original strand, 12473257 - 12473366
Alignment:
Q  210 tgagggggagacttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggta 307  Q
    ||||||| || ||||||||||  |||||||||| ||||||||  ||||||||||| | ||||||||| || ||||||| || ||||| ||||||||||||    
T  12473257 tgaggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaacctcttgtgtcaaaaacagggta 12473356  T
Q  308 aggctgcgta 317  Q
    ||| ||||||    
T  12473357 aggatgcgta 12473366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 18747473 - 18747549
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaa-cagggtaaggctgcgta 317  Q
    ||||| ||||||||||||||||| | ||||||||||||||||  ||| ||||||||||| |||||||||||||||||    
T  18747473 tgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgta 18747549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 22699130 - 22699043
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||| | | ||||||||| |||||| |  ||  |||||||||||||||||||| |||||||    
T  22699130 tggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaatagtctcttgtgtaaaaaacagggtaagactgcgta 22699043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 14099165 - 14099079
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||||||||||| | ||| ||||| |||||| |  ||| ||||||||||||||| |||| |||||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgta 14099079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 14409182 - 14409096
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||||||||||| | ||| ||||| |||||| |  ||| ||||||||||||||| |||| |||||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgta 14409096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 18326998 - 18327091
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctg 313  Q
    |||||||||| ||||||||||| ||||||||||||  ||||||||| |||||||||  ||||||| | || ||||| ||||||||||||||||||    
T  18326998 cttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctcttgtgt-aaaaacagggtaaggctg 18327091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 3469359 - 3469306
Alignment:
Q  211 gagggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcac 264  Q
    |||| |||| |||||||||| |||||||||| ||||||||||||||||||||||    
T  3469359 gaggtggagccttggcgcaacggtaaagttgttgtcatgtgactgaaaggtcac 3469306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 22065559 - 22065632
Alignment:
Q  227 gcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaa 299  Q
    ||||||||||||||| ||||| |||| ||||| |||| |||||||||| ||||||||||| || ||||||||||    
T  22065559 gcaatggtaaagttgttgtcacgtgattgaaaagtcatgagttcaagttttggaaacaacctcttgtgtaaaaa 22065632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 317
Target Start/End: Original strand, 11741774 - 11741855
Alignment:
Q  235 aaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||| ||||||||||||||||||||| | ||||||||| || ||||| ||||| ||||  |||| ||||||||||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgt--aaaatagggtaaggctgcgta 11741855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 316
Target Start/End: Original strand, 29907408 - 29907480
Alignment:
Q  245 tcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgt 316  Q
    ||||||||||||||||||||| ||||||||| | |||||| | || ||||||||||| || ||||||||||||    
T  29907408 tcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaaatagtgtaaggctgcgt 29907480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 253 - 317
Target Start/End: Complemental strand, 31591245 - 31591182
Alignment:
Q  253 ctgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||||||||| |||||||||| ||| |||  ||||||| |||||||||||||    
T  31591245 ctgaaaggtcacgagttcaagtcctggaaacaacctct-tgtgtaaaacagagtaaggctgcgta 31591182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 39123857 - 39123909
Alignment:
Q  223 tggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    ||||||||||||||||||| |||||||||||||||| | |||| |||||||||    
T  39123857 tggcgcaatggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtc 39123909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 231 - 309
Target Start/End: Complemental strand, 5180317 - 5180238
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaag 309  Q
    ||||||||||| ||||||||||||||||||||| | |||||| |  |||||||| | || ||||| ||||||||||||||    
T  5180317 tggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctcttgtgtcaaaaacagggtaag 5180238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 314
Target Start/End: Complemental strand, 1424080 - 1423986
Alignment:
Q  222 ttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgc 314  Q
    ||||||||| ||||||||||| ||| ||||||||| |||||||||  ||||| || ||||||||  ||  ||||||||||||||||||| |||||    
T  1424080 ttggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacagtctgttgtgtaaaaaacagggtaatgctgc 1423986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 312
Target Start/End: Complemental strand, 7794666 - 7794582
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca---acttctgtgtaaaaaacagggtaaggct 312  Q
    ||||||||||| ||| ||||||||| ||||||||| ||||||||| ||||||||    ||| |||  ||||||||||||||||||    
T  7794666 tggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttatgtaaaaaaaacagggtaaggct 7794582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 317
Target Start/End: Complemental strand, 32233313 - 32233208
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||||||  ||||||||||  | ||| ||| |||||  |||||||||||||| | ||||||||| |||||||||| || ||||| |||||||||||||||    
T  32233313 agggggacccttggcgcaacagaaaaattgttgtcacctgactgaaaggtcatgggttcaagtcctggaaacaacctcttgtgt-aaaaacagggtaagg 32233215  T
Q  311 ctgcgta 317  Q
    | |||||    
T  32233214 cagcgta 32233208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 316
Target Start/End: Complemental strand, 34626367 - 34626282
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgt 316  Q
    ||||||||||| |||||||||| ||||||| |||   |||||||| ||||||||  || |||||| |||||||||||||||||||||    
T  34626367 tggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgt-aaaaacagggtaaggctgcgt 34626282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 40463853 - 40463938
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||| | ||||||  ||  ||||| |||||| |||||||||||||||    
T  40463853 ggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgt-aaaaactgggtaaggctgcgta 40463938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 312
Target Start/End: Original strand, 5814435 - 5814528
Alignment:
Q  221 cttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctg-tgtaaaaaacagggtaaggct 312  Q
    ||||||||||| |||||||||| ||| |||||| || || |||||| |||||||| ||||||| ||| |||  ||||||||| |||||||||||    
T  5814435 cttggcgcaatcggtaaagttgttgttatgtgattggaaagtcacgggttcaagttttggaaagaacctcttatgtaaaaaatagggtaaggct 5814528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 7879639 - 7879700
Alignment:
Q  257 aaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||||||||| |||||||||  ||| |||||||||||| ||||||||||||||    
T  7879639 aaggtcacgggttcaagtcctggaaacaatctcttgtgtaaaaaacaaggtaaggctgcgta 7879700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 42102055 - 42101958
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgt-gtaaaaaacagggtaaggctgcgta 317  Q
    |||||| ||| |||||||||| ||||| ||||||| |||||||  |||||||||| |||||||| | |||   ||||||||||||||||  |||||||    
T  42102055 cttggcacaacggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctcttccgtaaaaaacagggtaacactgcgta 42101958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 8149106 - 8149018
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtg-taaaaaacagggtaaggctgcgta 317  Q
    |||||| |||| ||||||||||||| || |||||||||||||||| || |||| || || |||| ||||||| ||||||||| ||||||    
T  8149106 tggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaaggttgcgta 8149018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 317
Target Start/End: Original strand, 16341244 - 16341340
Alignment:
Q  222 ttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttct-gtgtaaaaaacagggtaaggctgcgta 317  Q
    |||| |||| |||||||||| | ||||||   |||||||||||| ||||||||  | |||||| | ||| |||||||||||||||||||||| ||||    
T  16341244 ttggagcaacggtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctcttgtgtaaaaaacagggtaaggctacgta 16341340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 275
Target Start/End: Original strand, 6736846 - 6736909
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    |||||||| |||| | |||  ||||||||| ||||||| ||||||||||||||| |||||||||    
T  6736846 agggggagccttgacacaacagtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtc 6736909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 255 - 317
Target Start/End: Complemental strand, 18512588 - 18512526
Alignment:
Q  255 gaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||| |||||||||| || ||||| ||||| ||||||||||||||||    
T  18512588 gaaaggtcacgggttcaagtcctggaaacaacatcttgtgt-aaaaatagggtaaggctgcgta 18512526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 44123791 - 44123728
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||| |||| |||||||||| ||||||||||||||||| | ||| ||||||||  ||||||||    
T  44123791 cttggtgcaacggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaaca 44123728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 276
Target Start/End: Complemental strand, 11458421 - 11458379
Alignment:
Q  234 taaagttgatgtcatgtgactgaaaggtcacgagttcaagtct 276  Q
    |||||||  |||||||||||| |||||||||||||||||||||    
T  11458421 taaagttattgtcatgtgactaaaaggtcacgagttcaagtct 11458379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 42476848 - 42476933
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||||| ||||||||||  |||||||  ||||||||   ||| |||  |||||| ||||||||||||||    
T  42476848 tggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctct-tgtgtaaaacaaggtaaggctgcgta 42476933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 29140531 - 29140466
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa 285  Q
    |||||||||| ||||||||||| |||||||| |||||||||||||   ||||||| ||| ||||||    
T  29140531 cttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacacattcaagttttgaaaacaa 29140466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 8491884 - 8491940
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtctt 277  Q
    ||||| |||| ||| |||| | ||||| |||||||||||||||| ||||||||||||    
T  8491884 cttggagcaacggtgaagtagctgtcacgtgactgaaaggtcacaagttcaagtctt 8491940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 8518693 - 8518749
Alignment:
Q  221 cttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtctt 277  Q
    ||||| |||| ||| |||| | ||||| |||||||||||||||| ||||||||||||    
T  8518693 cttggagcaacggtgaagtagctgtcacgtgactgaaaggtcacaagttcaagtctt 8518749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 28078286 - 28078238
Alignment:
Q  236 aagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||| ||||||||||||| ||||||||| ||||||||| | ||||||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 28078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 254 - 317
Target Start/End: Original strand, 35203437 - 35203501
Alignment:
Q  254 tgaaaggtcacgagttcaagtcttggaaaca-acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||||| ||||||||| ||||||||  ||  ||||||||||||||| |||| |||||||    
T  35203437 tgaaaggtcacgggttcaagtcctggaaacattctcttgtgtaaaaaacaggataagactgcgta 35203501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 46795 - 46893
Alignment:
Q  221 cttggcgcaat-ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| |||||||||| ||||||||||||  ||||||||| ||||||||  |||||||||| || ||||||||||| ||||||||| ||||||    
T  46795 cttggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgta 46893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 47062 - 46999
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtc 275  Q
    |||| ||| ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  47062 agggagagccttggcgcaatagtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtc 46999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 317
Target Start/End: Complemental strand, 24938 - 24845
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||     |||| | || ||||||||||||||||||||||||||||    
T  24938 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggtaaggctgcgta 24845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 233 - 317
Target Start/End: Original strand, 4134 - 4219
Alignment:
Q  233 gtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||| |||||||||| || ||||||||| ||||| ||||| ||||||    
T  4134 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgta 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 317
Target Start/End: Original strand, 30543 - 30639
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||  ||||||||| |||||||| | ||| |||  ||||||||||| |||||||||    
T  30543 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctct-tgtgtaaaacagggtagggctgcgta 30639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 83839 - 83904
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaa 285  Q
    |||||||||| | ||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  83839 cttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaa 83904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 58964 - 59039
Alignment:
Q  243 tgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||||||||||||||| ||||||||| |||||||| | || ||| |||||||||||||||| |||||||    
T  58964 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactgcgta 59039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 316
Target Start/End: Original strand, 10785 - 10871
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgt 316  Q
    ||||||||||| ||||||||||||| ||||||||| |||||||   || ||||||| || |||||||||||||||||| ||||||||    
T  10785 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgt 10871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 10208 - 10123
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  ||||||| ||||| |||||||    
T  10208 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagagtaagactgcgta 10123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 20536 - 20451
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| |||||||| | ||| |||  ||||||| ||||| |||||||    
T  20536 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctct-tgtgtaaaacagagtaagactgcgta 20451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 212 - 317
Target Start/End: Original strand, 23559 - 23661
Alignment:
Q  212 agggggagacttggcgcaatggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaagg 310  Q
    |||| ||| |||||||||| ||||||||||     ||||||||||||||  ||| |||||||||||| ||||||| || ||||||||||||||||| |||    
T  23559 agggagagccttggcgcaacggtaaagttgt----atgtgactgaaagggtacgggttcaagtcttgcaaacaacctcttgtgtaaaaaacagggtgagg 23654  T
Q  311 ctgcgta 317  Q
    |||||||    
T  23655 ctgcgta 23661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 314
Target Start/End: Complemental strand, 226577 - 226481
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgt-aaaaaacagggtaaggctgc 314  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||  |||||||| | |||||| | || ||| | ||||||||||||||||||||    
T  226577 cttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacagggtaaggctgc 226481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 1745 - 1663
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttctgtgtaaaaaacagggtaaggctgc 314  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||| || ||||||| ||| |||  |||||||| |||||||||    
T  1745 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctct-tgtgtaaaacaggataaggctgc 1663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 232 - 317
Target Start/End: Complemental strand, 13182 - 13097
Alignment:
Q  232 ggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| ||||||||||||||||||||||  ||||||||| |||||||| | || || || ||||||| ||||||||||||||    
T  13182 ggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgt-aaaaacaaggtaaggctgcgta 13097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 299
Target Start/End: Original strand, 8866 - 8935
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaacaacttc-tgtgtaaaaa 299  Q
    ||||||||||| ||||||||||||| ||||||||  |||||| || ||||||||||||| ||||||||||    
T  8866 tggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaacttcttgtgtaaaaa 8935  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 11096 - 11159
Alignment:
Q  221 cttggcgcaa-tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    |||||||||| ||||||||||| | | ||||||||||||||||||| ||||||||| ||||||||    
T  11096 cttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaaca 11159  T

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Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 43104 - 43157
Alignment:
Q  231 tggtaaagttgatgtcatgtgactgaaaggtcacgagttcaagtcttggaaaca 284  Q
    ||||||||||  |||||||||| |||||||||||||||||| ||| | ||||||    
T  43104 tggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaaca 43157  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 35179 - 35090
Alignment:
Q  231 tggtaaagttgat-gtcatgtgactgaaaggtcacgagttcaagtcttggaaaca---acttctgtgtaaaaaacagggtaaggctgcgta 317  Q
    |||||||||| || |||||||||||| ||||||||| ||||||||| || |||||    ||| |||||  |||||||||||||||||||||    
T  35179 tggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgt-gaaaacagggtaaggctgcgta 35090  T

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