View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8100_low_34 (Length: 305)

Name: NF8100_low_34
Description: NF8100
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8100_low_34
NF8100_low_34
[»] chr8 (46 HSPs)
chr8 (1-259)||(8897817-8898077)
chr8 (1-124)||(36720755-36720878)
chr8 (1-112)||(28817679-28817790)
chr8 (1-124)||(44530108-44530231)
chr8 (1-124)||(12670303-12670424)
chr8 (1-124)||(29521738-29521861)
chr8 (1-124)||(35261638-35261761)
chr8 (10-124)||(7136591-7136705)
chr8 (1-112)||(13160673-13160783)
chr8 (10-124)||(25250481-25250595)
chr8 (10-124)||(39461058-39461172)
chr8 (1-124)||(30454150-30454271)
chr8 (10-117)||(6760788-6760895)
chr8 (3-117)||(17823542-17823656)
chr8 (1-110)||(45071238-45071346)
chr8 (1-124)||(2626478-2626604)
chr8 (4-107)||(22598133-22598236)
chr8 (10-123)||(20869560-20869671)
chr8 (9-107)||(44781567-44781665)
chr8 (10-112)||(20284133-20284237)
chr8 (1-77)||(5135342-5135418)
chr8 (1-112)||(12625860-12625972)
chr8 (9-117)||(18164821-18164928)
chr8 (1-104)||(35105902-35106006)
chr8 (10-112)||(21070761-21070866)
chr8 (10-108)||(26954107-26954206)
chr8 (1-79)||(8483991-8484069)
chr8 (1-106)||(24365112-24365218)
chr8 (39-117)||(28407382-28407460)
chr8 (1-91)||(389635-389727)
chr8 (1-66)||(29877111-29877176)
chr8 (5-101)||(31457155-31457250)
chr8 (1-107)||(42083751-42083858)
chr8 (56-112)||(24245422-24245478)
chr8 (1-107)||(44742571-44742678)
chr8 (26-104)||(30962851-30962929)
chr8 (1-97)||(23000272-23000365)
chr8 (3-50)||(5689664-5689711)
chr8 (10-65)||(20869941-20869996)
chr8 (1-107)||(11001002-11001109)
chr8 (8-107)||(14018029-14018128)
chr8 (10-68)||(17250939-17250997)
chr8 (1-39)||(26457773-26457811)
chr8 (8-82)||(36918125-36918199)
chr8 (1-41)||(19729382-19729422)
chr8 (1-41)||(23286378-23286418)
[»] chr5 (40 HSPs)
chr5 (1-124)||(24448849-24448972)
chr5 (1-124)||(41014278-41014400)
chr5 (10-130)||(4619168-4619288)
chr5 (10-124)||(38879540-38879654)
chr5 (1-124)||(35710272-35710393)
chr5 (1-123)||(8170037-8170157)
chr5 (9-124)||(43334161-43334277)
chr5 (10-129)||(27328706-27328825)
chr5 (26-124)||(23974740-23974837)
chr5 (1-111)||(22600426-22600536)
chr5 (1-124)||(1565390-1565514)
chr5 (1-92)||(32703415-32703504)
chr5 (1-100)||(1405170-1405269)
chr5 (18-112)||(37024626-37024718)
chr5 (10-117)||(12006392-12006499)
chr5 (9-117)||(22187251-22187359)
chr5 (1-80)||(43574609-43574688)
chr5 (1-73)||(19142996-19143067)
chr5 (1-107)||(28516486-28516593)
chr5 (9-107)||(39301099-39301197)
chr5 (1-79)||(41425952-41426030)
chr5 (9-91)||(42924895-42924977)
chr5 (1-124)||(2838737-2838860)
chr5 (10-74)||(13801831-13801895)
chr5 (1-107)||(208980-209086)
chr5 (1-71)||(7368410-7368478)
chr5 (1-99)||(1850624-1850721)
chr5 (4-50)||(16880703-16880749)
chr5 (40-129)||(22861758-22861847)
chr5 (1-69)||(5873375-5873442)
chr5 (26-82)||(22025544-22025600)
chr5 (1-63)||(29334415-29334478)
chr5 (10-64)||(20135623-20135677)
chr5 (57-107)||(39079875-39079925)
chr5 (1-98)||(22907918-22908014)
chr5 (55-111)||(17419886-17419942)
chr5 (1-117)||(30006291-30006407)
chr5 (1-36)||(34154867-34154902)
chr5 (13-103)||(10634211-10634301)
chr5 (6-103)||(34074620-34074717)
[»] chr3 (62 HSPs)
chr3 (1-124)||(40272865-40272988)
chr3 (4-124)||(12914091-12914211)
chr3 (10-124)||(8247751-8247865)
chr3 (10-124)||(13730666-13730780)
chr3 (10-124)||(46421099-46421213)
chr3 (1-112)||(4495717-4495828)
chr3 (10-124)||(13628854-13628969)
chr3 (1-112)||(26869700-26869810)
chr3 (1-107)||(26573125-26573231)
chr3 (10-124)||(29366784-29366898)
chr3 (1-124)||(1217071-1217192)
chr3 (1-124)||(39203497-39203618)
chr3 (6-124)||(7696945-7697061)
chr3 (1-124)||(16735422-16735544)
chr3 (1-124)||(22609748-22609869)
chr3 (1-92)||(54032612-54032703)
chr3 (1-106)||(34420696-34420802)
chr3 (1-82)||(45948891-45948972)
chr3 (1-124)||(22122970-22123091)
chr3 (21-124)||(10870025-10870127)
chr3 (1-107)||(45620881-45620988)
chr3 (1-124)||(52926272-52926386)
chr3 (10-124)||(9607184-9607298)
chr3 (1-107)||(53996618-53996725)
chr3 (1-82)||(54374398-54374480)
chr3 (1-102)||(7942993-7943094)
chr3 (9-97)||(516417-516505)
chr3 (1-112)||(6411875-6411985)
chr3 (39-124)||(5173811-5173897)
chr3 (1-78)||(29106576-29106653)
chr3 (9-77)||(10795486-10795554)
chr3 (1-76)||(31592878-31592951)
chr3 (10-73)||(14986989-14987052)
chr3 (9-92)||(45139539-45139622)
chr3 (1-103)||(30928200-30928302)
chr3 (3-82)||(52428532-52428612)
chr3 (3-50)||(9276319-9276366)
chr3 (1-123)||(25517223-25517348)
chr3 (1-106)||(25944468-25944574)
chr3 (9-82)||(1121286-1121359)
chr3 (7-108)||(26782363-26782464)
chr3 (14-103)||(39211992-39212081)
chr3 (1-68)||(43114921-43114990)
chr3 (1-65)||(54484730-54484795)
chr3 (1-92)||(33926096-33926187)
chr3 (10-62)||(49013537-49013589)
chr3 (31-107)||(53062036-53062112)
chr3 (8-112)||(21875013-21875111)
chr3 (1-107)||(19731000-19731106)
chr3 (9-59)||(45786277-45786327)
chr3 (1-59)||(47624088-47624145)
chr3 (1-66)||(31904910-31904975)
chr3 (26-124)||(12525391-12525486)
chr3 (1-41)||(15797284-15797324)
chr3 (1-41)||(34771417-34771457)
chr3 (5-63)||(31831241-31831297)
chr3 (1-109)||(33235526-33235636)
chr3 (33-107)||(35417914-35417988)
chr3 (10-47)||(353413-353450)
chr3 (1-82)||(19751601-19751682)
chr3 (1-62)||(52952529-52952590)
chr3 (1-73)||(55401208-55401281)
[»] chr7 (60 HSPs)
chr7 (1-117)||(19426942-19427058)
chr7 (1-112)||(11617641-11617752)
chr7 (10-124)||(46354153-46354267)
chr7 (1-124)||(2541072-2541196)
chr7 (1-124)||(42798628-42798751)
chr7 (10-124)||(47716418-47716532)
chr7 (1-124)||(8148998-8149122)
chr7 (1-124)||(21172062-21172183)
chr7 (1-117)||(27629600-27629716)
chr7 (1-122)||(10693126-10693245)
chr7 (10-124)||(42805483-42805597)
chr7 (1-124)||(48735175-48735297)
chr7 (1-124)||(32758220-32758341)
chr7 (1-109)||(33871963-33872070)
chr7 (10-112)||(43557443-43557545)
chr7 (1-107)||(14099059-14099165)
chr7 (1-107)||(14409076-14409182)
chr7 (1-107)||(19265791-19265896)
chr7 (1-82)||(7879639-7879720)
chr7 (1-124)||(47077908-47078029)
chr7 (1-107)||(23419727-23419833)
chr7 (1-107)||(29907393-29907502)
chr7 (1-123)||(40463837-40463958)
chr7 (1-124)||(2662988-2663107)
chr7 (1-82)||(18512506-18512586)
chr7 (1-101)||(42391153-42391251)
chr7 (9-108)||(7644931-7645030)
chr7 (9-112)||(22699031-22699134)
chr7 (1-123)||(35334869-35334989)
chr7 (26-124)||(7193044-7193142)
chr7 (1-107)||(19266426-19266532)
chr7 (1-107)||(28362198-28362304)
chr7 (9-82)||(16341279-16341352)
chr7 (1-104)||(11741774-11741875)
chr7 (9-117)||(12473270-12473378)
chr7 (1-108)||(13805077-13805183)
chr7 (9-124)||(14732884-14732998)
chr7 (1-112)||(34626261-34626371)
chr7 (1-111)||(42476845-42476953)
chr7 (38-112)||(7794596-7794670)
chr7 (26-124)||(18326993-18327090)
chr7 (1-107)||(48123537-48123643)
chr7 (1-94)||(38262249-38262342)
chr7 (39-124)||(42495926-42496011)
chr7 (10-117)||(1423972-1424079)
chr7 (9-112)||(5180218-5180321)
chr7 (1-124)||(28078185-28078307)
chr7 (1-82)||(32233188-32233268)
chr7 (3-106)||(6736867-6736969)
chr7 (1-82)||(31591162-31591241)
chr7 (26-107)||(5814447-5814528)
chr7 (9-82)||(35203440-35203513)
chr7 (4-64)||(38604546-38604605)
chr7 (1-68)||(1408472-1408539)
chr7 (1-82)||(18747487-18747569)
chr7 (14-79)||(43852047-43852111)
chr7 (1-67)||(23231573-23231639)
chr7 (9-107)||(3469238-3469338)
chr7 (9-46)||(17048877-17048914)
chr7 (39-107)||(44123712-44123780)
[»] chr2 (52 HSPs)
chr2 (1-124)||(8455369-8455492)
chr2 (1-124)||(12023972-12024094)
chr2 (3-114)||(17667971-17668082)
chr2 (10-124)||(14530277-14530391)
chr2 (3-116)||(17623531-17623644)
chr2 (1-112)||(23397737-23397846)
chr2 (1-124)||(11514395-11514518)
chr2 (1-112)||(17896230-17896342)
chr2 (9-124)||(10543657-10543772)
chr2 (9-112)||(24200686-24200789)
chr2 (1-124)||(19977767-19977890)
chr2 (1-124)||(22371016-22371136)
chr2 (1-124)||(21779314-21779435)
chr2 (1-124)||(25079770-25079894)
chr2 (1-124)||(25249791-25249913)
chr2 (1-105)||(5450263-5450368)
chr2 (13-117)||(7214500-7214604)
chr2 (1-108)||(32781341-32781448)
chr2 (1-108)||(40416924-40417031)
chr2 (1-124)||(9671139-9671261)
chr2 (1-109)||(39914358-39914467)
chr2 (1-92)||(10546153-10546245)
chr2 (14-105)||(5841006-5841097)
chr2 (1-107)||(21377126-21377232)
chr2 (1-107)||(23145751-23145857)
chr2 (1-107)||(23557541-23557647)
chr2 (1-94)||(14444718-14444810)
chr2 (11-112)||(17705466-17705567)
chr2 (3-123)||(27573581-27573700)
chr2 (1-63)||(40762287-40762349)
chr2 (1-112)||(26684673-26684786)
chr2 (9-107)||(29419946-29420048)
chr2 (18-107)||(33795261-33795350)
chr2 (3-106)||(99320-99421)
chr2 (5-117)||(24860045-24860155)
chr2 (39-111)||(44604826-44604898)
chr2 (7-103)||(17380296-17380391)
chr2 (1-107)||(4516404-4516510)
chr2 (10-92)||(19614983-19615065)
chr2 (1-98)||(31821396-31821491)
chr2 (1-67)||(36871509-36871574)
chr2 (1-107)||(44521426-44521532)
chr2 (1-106)||(45235870-45235976)
chr2 (3-68)||(30826052-30826116)
chr2 (4-82)||(2003592-2003671)
chr2 (1-48)||(25632544-25632591)
chr2 (1-98)||(25641487-25641583)
chr2 (5-68)||(30864474-30864536)
chr2 (16-124)||(14544022-14544131)
chr2 (9-74)||(15296468-15296533)
chr2 (1-42)||(39499283-39499324)
chr2 (29-105)||(31158522-31158598)
[»] chr4 (66 HSPs)
chr4 (1-124)||(5648218-5648340)
chr4 (1-124)||(20224943-20225064)
chr4 (1-124)||(48598878-48598999)
chr4 (1-124)||(6430679-6430801)
chr4 (10-123)||(21646924-21647037)
chr4 (10-122)||(16408665-16408777)
chr4 (1-112)||(47528583-47528692)
chr4 (1-124)||(5306717-5306839)
chr4 (1-108)||(19027823-19027930)
chr4 (1-110)||(40915802-40915910)
chr4 (4-124)||(30639339-30639458)
chr4 (1-112)||(37494822-37494933)
chr4 (1-100)||(41018847-41018945)
chr4 (10-124)||(10660363-10660477)
chr4 (10-124)||(10874508-10874622)
chr4 (10-124)||(16911521-16911635)
chr4 (1-103)||(17043447-17043549)
chr4 (1-82)||(47443958-47444039)
chr4 (1-124)||(14590796-14590920)
chr4 (1-124)||(14983793-14983916)
chr4 (1-107)||(35567146-35567252)
chr4 (6-117)||(11054206-11054315)
chr4 (1-97)||(25463108-25463204)
chr4 (1-107)||(487187-487294)
chr4 (1-100)||(7385529-7385628)
chr4 (1-68)||(9987887-9987954)
chr4 (1-105)||(9832366-9832468)
chr4 (10-124)||(23501752-23501860)
chr4 (38-124)||(30352681-30352767)
chr4 (10-107)||(54730225-54730323)
chr4 (1-107)||(54966997-54967102)
chr4 (1-117)||(8473675-8473789)
chr4 (10-112)||(13256463-13256561)
chr4 (39-124)||(17315389-17315474)
chr4 (9-110)||(44363193-44363294)
chr4 (9-108)||(25343162-25343261)
chr4 (1-91)||(29207951-29208039)
chr4 (4-102)||(39077852-39077948)
chr4 (1-66)||(20639711-20639777)
chr4 (1-63)||(25629069-25629131)
chr4 (26-107)||(42164227-42164307)
chr4 (26-107)||(43035224-43035305)
chr4 (1-103)||(54175043-54175146)
chr4 (9-92)||(7038044-7038126)
chr4 (9-108)||(44357195-44357294)
chr4 (5-107)||(47441587-47441689)
chr4 (1-117)||(30496375-30496489)
chr4 (1-105)||(30690229-30690340)
chr4 (2-59)||(51865092-51865149)
chr4 (1-105)||(32478844-32478942)
chr4 (1-82)||(30581518-30581601)
chr4 (1-107)||(39029113-39029220)
chr4 (39-104)||(49938681-49938746)
chr4 (11-68)||(51420589-51420646)
chr4 (1-65)||(7909334-7909397)
chr4 (4-79)||(10277813-10277886)
chr4 (9-105)||(23580269-23580365)
chr4 (30-105)||(7227710-7227785)
chr4 (1-59)||(12711502-12711561)
chr4 (1-63)||(49796818-49796879)
chr4 (3-112)||(55766521-55766630)
chr4 (55-124)||(5313101-5313170)
chr4 (1-74)||(17079704-17079777)
chr4 (38-107)||(54640429-54640498)
chr4 (72-112)||(20405064-20405104)
chr4 (1-68)||(21489102-21489170)
[»] chr1 (67 HSPs)
chr1 (1-112)||(46991798-46991909)
chr1 (1-112)||(23768373-23768484)
chr1 (1-124)||(32632610-32632732)
chr1 (1-124)||(41319859-41319982)
chr1 (1-124)||(46248006-46248129)
chr1 (1-110)||(6925096-6925205)
chr1 (10-123)||(30395790-30395903)
chr1 (1-124)||(34725151-34725272)
chr1 (10-124)||(18944625-18944739)
chr1 (1-124)||(14617020-14617143)
chr1 (8-107)||(18724605-18724704)
chr1 (10-112)||(20004154-20004256)
chr1 (3-124)||(38478337-38478456)
chr1 (5-106)||(25468320-25468421)
chr1 (5-106)||(44485166-44485267)
chr1 (1-117)||(47214500-47214614)
chr1 (1-107)||(2435839-2435946)
chr1 (2-109)||(4430080-4430187)
chr1 (5-112)||(8197037-8197144)
chr1 (9-108)||(27201645-27201744)
chr1 (1-124)||(45812590-45812711)
chr1 (10-124)||(10668202-10668321)
chr1 (9-104)||(22327101-22327196)
chr1 (1-124)||(22930122-22930243)
chr1 (1-107)||(11596512-11596617)
chr1 (9-107)||(17470407-17470505)
chr1 (3-108)||(20036218-20036324)
chr1 (9-107)||(35117829-35117927)
chr1 (9-117)||(19932816-19932921)
chr1 (1-123)||(12126890-12127010)
chr1 (9-108)||(15511210-15511311)
chr1 (1-117)||(33222973-33223089)
chr1 (1-108)||(6983864-6983969)
chr1 (1-108)||(19414437-19414542)
chr1 (1-92)||(35253240-35253329)
chr1 (36-107)||(2435981-2436052)
chr1 (9-104)||(9939463-9939558)
chr1 (1-112)||(27474275-27474385)
chr1 (1-124)||(45402077-45402201)
chr1 (27-129)||(25290140-25290244)
chr1 (1-117)||(27136704-27136820)
chr1 (9-82)||(35005147-35005220)
chr1 (10-107)||(50760288-50760385)
chr1 (5-68)||(24564382-24564445)
chr1 (9-124)||(18742020-18742137)
chr1 (55-124)||(34714605-34714674)
chr1 (1-45)||(4349699-4349743)
chr1 (2-82)||(31272429-31272508)
chr1 (1-65)||(31382267-31382330)
chr1 (1-124)||(18335341-18335464)
chr1 (9-107)||(50811938-50812037)
chr1 (3-65)||(34679274-34679336)
chr1 (1-107)||(35019229-35019335)
chr1 (62-124)||(40424724-40424786)
chr1 (1-82)||(45264452-45264534)
chr1 (9-106)||(19701570-19701667)
chr1 (1-42)||(21910702-21910743)
chr1 (1-41)||(10378788-10378828)
chr1 (4-64)||(34149016-34149076)
chr1 (16-68)||(39215027-39215079)
chr1 (9-62)||(19656167-19656220)
chr1 (5-42)||(21723747-21723784)
chr1 (9-74)||(22324925-22324989)
chr1 (1-82)||(23371148-23371228)
chr1 (43-108)||(25554817-25554882)
chr1 (2-50)||(20999904-20999952)
chr1 (4-64)||(23796507-23796567)
[»] scaffold0057 (3 HSPs)
scaffold0057 (1-117)||(46797-46913)
scaffold0057 (1-124)||(24825-24943)
scaffold0057 (1-34)||(43706-43739)
[»] chr6 (32 HSPs)
chr6 (1-124)||(1346923-1347044)
chr6 (1-124)||(1354810-1354931)
chr6 (10-117)||(12221979-12222086)
chr6 (15-124)||(8409202-8409311)
chr6 (1-112)||(1941826-1941937)
chr6 (1-124)||(3815130-3815253)
chr6 (10-124)||(29355919-29356034)
chr6 (10-112)||(2166474-2166576)
chr6 (10-112)||(2178107-2178209)
chr6 (3-107)||(13905034-13905138)
chr6 (1-78)||(33138838-33138915)
chr6 (9-112)||(14553483-14553585)
chr6 (10-112)||(6024204-6024306)
chr6 (14-107)||(9161099-9161191)
chr6 (38-123)||(14975170-14975255)
chr6 (1-124)||(15866092-15866213)
chr6 (8-124)||(20400626-20400742)
chr6 (9-107)||(7947433-7947531)
chr6 (1-105)||(28007604-28007708)
chr6 (3-106)||(32728211-32728314)
chr6 (28-91)||(17432332-17432395)
chr6 (26-117)||(24097547-24097638)
chr6 (38-117)||(24734599-24734678)
chr6 (12-117)||(12889393-12889497)
chr6 (1-82)||(18277246-18277327)
chr6 (7-65)||(25557743-25557799)
chr6 (7-65)||(26097178-26097234)
chr6 (9-107)||(2755485-2755583)
chr6 (13-50)||(24751139-24751176)
chr6 (11-111)||(27855500-27855601)
chr6 (18-82)||(17448325-17448389)
chr6 (1-73)||(32579436-32579507)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-124)||(30538-30659)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-112)||(10781-10892)
[»] scaffold0254 (1 HSPs)
scaffold0254 (10-112)||(4128-4230)
[»] scaffold0187 (2 HSPs)
scaffold0187 (1-112)||(10103-10212)
scaffold0187 (1-112)||(20431-20540)
[»] scaffold0049 (1 HSPs)
scaffold0049 (9-125)||(58935-59051)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-124)||(226458-226582)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-124)||(13077-13199)
[»] scaffold0223 (1 HSPs)
scaffold0223 (1-122)||(11093-11211)
[»] scaffold1176 (1 HSPs)
scaffold1176 (1-108)||(1640-1745)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-112)||(35070-35183)
[»] scaffold0116 (1 HSPs)
scaffold0116 (39-109)||(8865-8935)
[»] scaffold0024 (1 HSPs)
scaffold0024 (54-124)||(83834-83904)
[»] scaffold0194 (1 HSPs)
scaffold0194 (55-124)||(24623-24692)
[»] scaffold0167 (1 HSPs)
scaffold0167 (1-76)||(23606-23681)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-79)||(72924-72999)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-62)||(48687-48746)
[»] scaffold0954 (1 HSPs)
scaffold0954 (1-67)||(3560-3626)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-35)||(24186-24220)
[»] scaffold0031 (1 HSPs)
scaffold0031 (39-112)||(43100-43173)


Alignment Details
Target: chr8 (Bit Score: 234; Significance: 1e-129; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 8897817 - 8898077
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8897817 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaa 8897916  T
Q  101 ctttaccagttgtgccagggttactcttcttttaaaagcttagctatatttaccataattaggttgctctaat--aaaccatattgaagctctcacaatt 198  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8897917 ctttaccagttgtgccagggttactcttcttttaaaaacttagctatatttaccataattaggttgctctaataaaaaccatattgaagctctcacaatt 8898016  T
Q  199 atcttttagaccaaatcactttgtaatcagcttttacctagatatagaagactaggagcga 259  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  8898017 atcttttagaccaaatcacttcgtaatcagcttttgcctagatatagaagactaggagcga 8898077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 36720878 - 36720755
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  36720878 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 36720779  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||  |||| ||||||    
T  36720778 ctttaccagttacgccaaggttac 36720755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28817679 - 28817790
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  28817679 tcccaccattgggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 28817778  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  28817779 ctttaccagttg 28817790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 44530231 - 44530108
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||| |||||||||||||   ||||||| ||| |||    
T  44530231 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaa 44530132  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  44530131 ctttaccagttgcgccaaggttac 44530108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12670303 - 12670424
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  12670303 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 12670400  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  12670401 ctttaccagttgcgccaaggttac 12670424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 29521738 - 29521861
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||| || |||||||||||||| ||||||||||||| | ||||||  |||||||    
T  29521738 tcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaa 29521837  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||||| |||||| |||| ||||||    
T  29521838 ctttatcagttgcgccaaggttac 29521861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 35261761 - 35261638
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||| |  |||||||||| ||| ||||||||||||| | ||||||| |||||||    
T  35261761 tcccaccatttggtgtattgtacgcaaccttaccctgttttttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaa 35261662  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  35261661 ctttaccagttgcgccaaggttac 35261638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 7136591 - 7136705
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||    
T  7136591 ttggtgtattgtacgcagccttaccctggtttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttaccag 7136690  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  7136691 ttgcgccaaggttac 7136705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 13160783 - 13160673
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || |||||| ||||||| ||||||||||||| | ||||||| |||||||    
T  13160783 tcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaa 13160685  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  13160684 ctttaccagttg 13160673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 25250595 - 25250481
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| |||| |||||||||||||||||||  || |||||||||||||| |||  |||||||| | ||||||| ||||||||||||||||    
T  25250595 ttggtgtattgtacgcagccataccctattttttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaactttaccag 25250496  T
Q  110 ttgtgccagggttac 124  Q
    |||||||| ||||||    
T  25250495 ttgtgccaaggttac 25250481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 39461058 - 39461172
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| |||||||| || ||||||||||||| || |||||||||||||| ||||||||||||| | ||| ||| ||||||||||||||||    
T  39461058 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttaccag 39461157  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  39461158 ttgcgccaaggttac 39461172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 30454150 - 30454271
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||| ||||| ||||||||| | ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  30454150 tcccaccatttggtgtatcgtacgcagccttaccttgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 30454247  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  30454248 ctttaccagttgcgccaaggttac 30454271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 6760895 - 6760788
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| |||||||||||||   |||| || ||||||||||||||||    
T  6760895 ttggtgtattgtacgaagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttaccag 6760796  T
Q  110 ttgtgcca 117  Q
    ||| ||||    
T  6760795 ttgcgcca 6760788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 17823656 - 17823542
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    ||||||||||||||||| |||| || |||| |||  |||||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||||    
T  17823656 ccaccatttggtgtattttacgcagtcttatcctggtttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaact 17823557  T
Q  103 ttaccagttgtgcca 117  Q
    |||||||||| ||||    
T  17823556 ttaccagttgcgcca 17823542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 45071346 - 45071238
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || ||||||||| |||| ||||||||||||| |  |||||| |||||||    
T  45071346 tcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaa 45071248  T
Q  101 ctttaccagt 110  Q
    ||||||||||    
T  45071247 ctttaccagt 45071238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 2626604 - 2626478
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt---acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaa 97  Q
    ||||| |||||||||||||||||| || |||||||| ||||||   ||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||    
T  2626604 tcccatcatttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaa 2626505  T
Q  98 caactttaccagttgtgccagggttac 124  Q
    ||||||||||| ||| |||| ||||||    
T  2626504 caactttaccaattgcgccaaggttac 2626478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 107
Target Start/End: Complemental strand, 22598236 - 22598133
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactt 103  Q
    ||||| |||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||| | ||||  | ||||||||||    
T  22598236 caccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgtttccaggatttgaacccgtgacctttcagtcatgtgacaacaactt 22598137  T
Q  104 tacc 107  Q
    ||||    
T  22598136 tacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 20869560 - 20869671
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||  ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  20869560 ttggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccag 20869657  T
Q  110 ttgtgccagggtta 123  Q
    ||| |||| |||||    
T  20869658 ttgcgccaaggtta 20869671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 44781567 - 44781665
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||||||  ||||||||||| | ||||||||||| ||||||||||||||||| ||||||||| ||| | ||||| | ||||||||||||||    
T  44781567 tttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 20284133 - 20284237
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctatttttt--acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||||||||| ||||||||||| ||||||  | ||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||    
T  20284133 ttggtgtattgtacgcagccttacccttttttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T
Q  108 agttg 112  Q
     ||||    
T  20284233 cgttg 20284237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5135342 - 5135418
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtg 77  Q
    |||||||||||||||||||||||  ||||||||||| ||||||||||||| || |||||||||||||| ||||||||    
T  5135342 tcccaccatttggtgtattgtacacagccttaccctcttttttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 12625972 - 12625860
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||||||||||||| | || |||||||| |||||| ||||||| ||||||||||||||||| | ||||||||||    ||||||  ||||||    
T  12625972 tcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaaca 12625873  T
Q  100 actttaccagttg 112  Q
    |||||||||||||    
T  12625872 actttaccagttg 12625860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 18164821 - 18164928
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| | ||||||||| |||| |||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||||| |||     
T  18164821 tttggtgtattgtacgcaaccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttcaccg 18164919  T
Q  109 gttgtgcca 117  Q
    |||| ||||    
T  18164920 gttgcgcca 18164928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35106006 - 35105902
Alignment:
Q  1 tcccaccatt-tggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||| |||||||||||||| |||||||| || | ||||||||||| ||||||||||||||||| ||||||||||||| | | ||| | ||||||    
T  35106006 tcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaaca 35105907  T
Q  100 acttt 104  Q
    |||||    
T  35105906 acttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 21070761 - 21070866
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctatttttt---acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttac 106  Q
    ||||||||||||||| ||||||||||| ||||||   | ||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||||||||    
T  21070761 ttggtgtattgtacgcagccttaccctttttttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttac 21070860  T
Q  107 cagttg 112  Q
    | ||||    
T  21070861 ccgttg 21070866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 26954206 - 26954107
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    ||||||||||||||| ||||||||||| |||||| ||||||| || |||||||||||||| |||||||||||||    |||||| |||||||||||||||    
T  26954206 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacca 26954107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 8483991 - 8484069
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgac 79  Q
    |||||||| ||||||||||||||| |||||| |||| ||||||||||||| ||||||||||||||||| ||||| ||||    
T  8483991 tcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgtttccaggacttgaacccatgac 8484069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 24365112 - 24365218
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct-attttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||| || |||||| ||| ||| |||||||||| ||   ||||||| ||||||    
T  24365112 tcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgtgacattttagtcacatgacaaca 24365211  T
Q  100 actttac 106  Q
    |||||||    
T  24365212 actttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 28407460 - 28407382
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgcca 117  Q
    |||||||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||| ||||    
T  28407460 tttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcca 28407382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 389727 - 389635
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt--acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcaca 91  Q
    ||||| |||||||||||||||||| | ||||||||| ||||||  ||||||| || |||||||||||||| ||||||||||||| ||| ||||    
T  389727 tcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtgtttccaggacttgaacccgtgacctttctgacaca 389635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 29877176 - 29877111
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggac 66  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||  || ||||||||||||    
T  29877176 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaaaggctgtttccaggac 29877111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 31457250 - 31457155
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaac 101  Q
    |||||||| ||||||||||| ||||||  ||||||||| ||||||| |||||||| |||||||| ||||||||||||| | | ||||| ||||||||    
T  31457250 accatttgatgtattgtacgcagccttttcctattttt-acacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 42083751 - 42083858
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||| || |||||| |||||| ||| |||||||||||||  || |||||||||||||| ||||||||||||| | ||||| | ||||||    
T  42083751 tcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaaca 42083850  T
Q  100 actttacc 107  Q
    | ||||||    
T  42083851 attttacc 42083858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 24245478 - 24245422
Alignment:
Q  56 gtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttg 112  Q
    ||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||    
T  24245478 gtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttg 24245422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44742571 - 44742678
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||| | | |||||||||| |||| ||| | ||||||| |  ||||   ||||||    
T  44742571 tcccaccattttggtgtattgtacgcagccttaccctgttttttacacaggagattgtttccagaacttgaactcatgaccttacaatcacgcgacaaca 44742670  T
Q  100 actttacc 107  Q
    ||||||||    
T  44742671 actttacc 44742678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 30962851 - 30962929
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    ||||| ||||||||||||||||||| || |||||||||||||| ||  ||||||||| |  |||||| |||||||||||    
T  30962851 agcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23000272 - 23000365
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaa 97  Q
    |||||||||||||||||||||| | | ||||||| |  |||||||||||| || ||||||||||||||  |||||||||||| | ||||||| ||||    
T  23000272 tcccaccatttggtgtattgtatggaaccttaccgt-gtttttacacaagaggctgtttccaggactt--acccgtgacctttcagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 5689711 - 5689664
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaag 50  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||    
T  5689711 ccaccatttggtgtattgtacgcagccttaccctgctttttacacaag 5689664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 20869996 - 20869941
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagga 65  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |  |||||||||||    
T  20869996 ttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 11001002 - 11001109
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct-attttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||||||||||||||  ||||||| | |  |||||||||||   |||||||| ||| | || |||||| |||||| |  |||||| ||||||    
T  11001002 tcccaccatttggtgtattgtacacagccttatcttgtttttttacacagtaggttgttttcagaatttgaacccgcgacctttcaatcacatgacaaca 11001101  T
Q  100 actttacc 107  Q
    ||||||||    
T  11001102 actttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 14018029 - 14018128
Alignment:
Q  8 atttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||| |||||||||||| || || ||||| ||||||||||||| |  |||||||| ||||| ||||| ||||||| |  |||| | |||||||| |||||    
T  14018029 atttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttcaatcacgtgacaacaacattacc 14018128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 17250939 - 17250997
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    |||||||||||||||  |||||| ||| ||||||||||||| || || |||||||||||    
T  17250939 ttggtgtattgtacgctgccttaacctgttttttacacaagaggctgcttccaggactt 17250997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26457811 - 26457773
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatt 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  26457811 tcccaccaattggtgtattgtacgcagccttaccctatt 26457773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 36918199 - 36918125
Alignment:
Q  8 atttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||||||||  ||||||||||| ||||||||| |||   |||||||||| |||| |||  ||||||||    
T  36918199 atttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctt 36918125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19729422 - 19729382
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt 41  Q
    |||||||||||||||||||||||  ||||||||||| ||||    
T  19729422 tcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23286378 - 23286418
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt 41  Q
    |||||||||||||||||||||||| ||| ||||||| ||||    
T  23286378 tcccaccatttggtgtattgtacgcagctttaccctgtttt 23286418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 6e-40; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 24448972 - 24448849
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  24448972 tcccaccatttggtgtattgtacgcagccttaccctattttttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 24448873  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  24448872 ctttaccagttgcgccaaggttac 24448849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 41014400 - 41014278
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  41014400 tcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 41014302  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  41014301 ctttaccagttgcgccaaggttac 41014278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 130
Target Start/End: Original strand, 4619168 - 4619288
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || | |||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  4619168 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccag 4619267  T
Q  110 ttgtgccagggttactcttct 130  Q
    ||| |||| |||||| |||||    
T  4619268 ttgcgccaaggttacccttct 4619288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 38879654 - 38879540
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  38879654 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccag 38879555  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  38879554 ttgcgccaaggttac 38879540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 35710393 - 35710272
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||| ||| ||||||||||||||||  ||||||| || |||||||||||||| ||||||||||||| | || |||| |||||||    
T  35710393 tcccaccatttggtgtattgaacgcagccttaccctatttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaa 35710296  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  35710295 ctttaccagttgcgccaaggttac 35710272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8170037 - 8170157
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||  || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  8170037 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaa 8170134  T
Q  101 ctttaccagttgtgccagggtta 123  Q
    |||||||||||| |||| |||||    
T  8170135 ctttaccagttgcgccaaggtta 8170157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 43334277 - 43334161
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||||||| ||||||||||| |||||| ||||| | || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||    
T  43334277 tttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 43334178  T
Q  108 agttgtgccagggttac 124  Q
    ||||| |||| ||||||    
T  43334177 agttgcgccaaggttac 43334161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 129
Target Start/End: Complemental strand, 27328825 - 27328706
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |  |||||||||||||| |||| |||||||| | ||||||| |||||||||||||||     
T  27328825 ttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttaccaa 27328726  T
Q  110 ttgtgccagggttactcttc 129  Q
    ||| | || |||||| ||||    
T  27328725 ttgcgtcaaggttacccttc 27328706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 23974837 - 23974740
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||| |||| |||| ||||||    
T  23974837 agccttaccctcttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc-gttgcgccaaggttac 23974740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22600536 - 22600426
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||  ||||||||||| | ||||||||||    ||||||||||||||| ||||||| ||||| | ||||||| | |||||    
T  22600536 tcccaccatttggtgtattgtacacagccttaccctgtgttttacacaaaatattgtttccaggacttgaacccgtaaccttccagtcacatgataacaa 22600437  T
Q  101 ctttaccagtt 111  Q
    |||||||||||    
T  22600436 ctttaccagtt 22600426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 1565514 - 1565390
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||| |||||||||| |||||||| |||||||   | |||||| || |||| ||||||||||||||||| |||||| |||||| | ||||||| ||||||    
T  1565514 tcccgccatttggtgcattgtacgcagccttaatatgtttttttactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaaca 1565415  T
Q  100 actttaccagttgtgccagggttac 124  Q
    ||||||||||||| |||| ||||||    
T  1565414 actttaccagttgcgccaaggttac 1565390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32703504 - 32703415
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | |||||||    
T  32703504 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 32703415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1405269 - 1405170
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| |  ||||| |||||||||| | ||| ||||||||||||||||| |||||||||||||   ||||||| |||||||    
T  1405269 tcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgaccttctagtcacatgacaacaa 1405170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 37024626 - 37024718
Alignment:
Q  18 ttgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttg 112  Q
    ||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttg 37024718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 12006392 - 12006499
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaa-cccgtgaccttgctgtcacattacaacaactttacca 108  Q
    ||||||||||||| | ||||||||||||||||||||| ||| ||||||||||| ||||| || ||||||||||| | ||||||| |||||||||| | ||    
T  12006392 ttggtgtattgtatggagccttaccctattttttacataagaggttgtttcca-gacttgaaccccgtgacctttcagtcacatgacaacaacttgagca 12006490  T
Q  109 gttgtgcca 117  Q
    |||| ||||    
T  12006491 gttgcgcca 12006499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 22187359 - 22187251
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| || |||| | | ||||||||||||| || |||||||||||||| |||| |||||||| | |||| || ||||||||||||| |    
T  22187359 tttggtgtattgtacgcagtcttatcatgttttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttacta 22187260  T
Q  109 gttgtgcca 117  Q
    |||| ||||    
T  22187259 gttgcgcca 22187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43574688 - 43574609
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacc 80  Q
    |||||||||||||| ||||||||| ||||||||||| |||| |||||||| | ||||||||||||||| ||| |||||||    
T  43574688 tcccaccatttggtatattgtacgcagccttaccctgttttctacacaagagattgtttccaggacttgaacacgtgacc 43574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19142996 - 19143067
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacc 73  Q
    ||||||||||||||||| |||||| |||||||||||  |||||||||||| ||||||||||||||||| ||||    
T  19142996 tcccaccatttggtgtactgtacgcagccttaccct-gtttttacacaagaggttgtttccaggacttgaacc 19143067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28516486 - 28516593
Alignment:
Q  1 tcccaccatttgg-tgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| | ||||||||||| |||| || ||| ||||||||||||| || |||||||| ||||| ||||||||||||| | | ||| | ||||||    
T  28516486 tcccaccattttgatgtattgtacgcagccctagcctgttttttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaaca 28516585  T
Q  100 actttacc 107  Q
    ||||||||    
T  28516586 actttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 39301197 - 39301099
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||| ||| |||| | ||||||||| |||| |||||||| ||||||| ||| ||||| ||||||||||||| | || |||| ||||||||||||||    
T  39301197 tttggtgcattatacgcatccttaccctgttttatacacaagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 41426030 - 41425952
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgac 79  Q
    |||||||| ||||||||||||| | ||||||||||| ||||||||||||   ||||||||||| |||| ||||||||||    
T  41426030 tcccaccaattggtgtattgtatgcagccttaccctgttttttacacaataagttgtttccagaacttgaacccgtgac 41425952  T

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Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 42924895 - 42924977
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcaca 91  Q
    |||||||||||||||| | ||||||||| |||||||||||||  ||||||| |||||||| ||| ||||||||| | ||||||    
T  42924895 tttggtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttcagtcaca 42924977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 2838860 - 2838737
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacc-ttgctgtcacattacaaca 99  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||||  | ||||||   ||||| | | ||||||| || | ||||||| ||||||    
T  2838860 tcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagatgctgtttctgagacttgacctcgtgacctttacagtcacatgacaaca 2838762  T
Q  100 actttaccagttgtgccagggttac 124  Q
    |||||||| |||| |||| ||||||    
T  2838761 actttaccggttgcgccaaggttac 2838737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 13801831 - 13801895
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaaccc 74  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || || ||||||||||| |||||    
T  13801831 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 208980 - 209086
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||||| | | ||||||||||| |||| |||||||| ||||||| ||||||||| |||  ||||||||   ||||||| ||||||    
T  208980 tcccaccattttggtgtattgaatgcagccttaccctgtttt-tacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaaca 209078  T
Q  100 actttacc 107  Q
    ||||||||    
T  209079 actttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7368478 - 7368410
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaa 71  Q
    |||||||| ||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||||||||    
T  7368478 tcccaccaattggtgtattgtacgcagccttaccc--tgttttacacaagaggctgtttccaggacttcaa 7368410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1850721 - 1850624
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||| ||||||||||| | |||||  || ||||| ||||||| |||| ||||| |||||| ||||||||||||| | ||||||| ||||||    
T  1850721 tcccaccatttgatgtattgtacgcacccttattctgttttt-acacaagaggttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 16880703 - 16880749
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaag 50  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||    
T  16880703 caccatttggtgtattgtacgcagccttaccctgttttttacacaag 16880749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 129
Target Start/End: Original strand, 22861758 - 22861847
Alignment:
Q  40 ttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttactcttc 129  Q
    ||||||||||| |  || ||| ||||||| || |||||||||| | ||||||| |||||||||||| ||||||||||| |||||| ||||    
T  22861758 ttttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttacccttc 22861847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 5873375 - 5873442
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttc 69  Q
    |||||||| |||||||| ||||| ||||||||||||| |||||||||||| || |||||||| ||||||    
T  5873375 tcccaccaattggtgtagtgtacttagccttacccta-tttttacacaagaggctgtttccacgacttc 5873442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 22025600 - 22025544
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||| ||||||||||||| || |||||||||||||| ||||| |||||||    
T  22025600 agccttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctt 22025544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 29334478 - 29334415
Alignment:
Q  1 tcccaccatt-tggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccag 63  Q
    |||||||||| |||||||||||||| ||||||||| | ||||||||||||| || |||||||||    
T  29334478 tcccaccattctggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccag 29334415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 20135677 - 20135623
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagg 64  Q
    ||||||||||||||| ||||||||| | ||||||||||||| || ||||||||||    
T  20135677 ttggtgtattgtacgcagccttaccttgttttttacacaagaggctgtttccagg 20135623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 107
Target Start/End: Original strand, 39079875 - 39079925
Alignment:
Q  57 tttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||| ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  39079875 tttccaagacttgaacccgtgacctttctgtcacatgacaacaactttacc 39079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 22907918 - 22908014
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaac 98  Q
    |||||||||||||||||||||| | | |||||| || |||| |||||||| || ||||||  |||||| ||||| ||||||| | ||||||| |||||    
T  22907918 tcccaccatttggtgtattgtatgcaaccttactctgtttt-tacacaagaggctgtttcttggacttgaacccttgacctttcagtcacataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Complemental strand, 17419942 - 17419886
Alignment:
Q  55 tgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagtt 111  Q
    |||||||||||||| ||| ||| ||||| | ||||||||||||||| ||||||||||    
T  17419942 tgtttccaggacttgaactcgtaacctttcagtcacattacaacaattttaccagtt 17419886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 30006407 - 30006291
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||| ||||| |||||  ||||||||||| || |||| | ||| |||||||| | |||||| || |  ||||||| | ||||||| |||||||    
T  30006407 tcccaccatttagtgtaatgtacacagccttaccctgttgtttatataagaggttgttttccggacttgaatctatgacctttcagtcacatgacaacaa 30006308  T
Q  101 ctttaccagttgtgcca 117  Q
     |||| |||||| ||||    
T  30006307 atttatcagttgcgcca 30006291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 34154867 - 34154902
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  34154867 tcccaccatttggtgtattgtacgcagccttaccct 34154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Original strand, 10634211 - 10634301
Alignment:
Q  13 gtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactt 103  Q
    ||||||| |||  |||||||||||  ||||| |||| | ||||||||| ||||||| ||||| ||||||| | ||||| | ||||||||||    
T  10634211 gtgtattttaccgagccttaccctgatttttgcacacgaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaactt 10634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 103
Target Start/End: Original strand, 34074620 - 34074717
Alignment:
Q  6 ccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactt 103  Q
    ||||||||||||||| ||| | ||||||  | ||||||||||||| || |||||| ||||||| |||  |||||||| | ||||  | ||||||||||    
T  34074620 ccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 6e-40; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40272865 - 40272988
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||||||| | ||||||| |||||||    
T  40272865 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaa 40272964  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  40272965 ctttaccagttgcgccaaggttac 40272988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 4 - 124
Target Start/End: Original strand, 12914091 - 12914211
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactt 103  Q
    |||||||||||||||||||||  |||||||||| ||||||||||||| || |||||||||||||| |||  |||||||| | ||||||||||||||||||    
T  12914091 caccatttggtgtattgtacgccgccttaccctgttttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactt 12914190  T
Q  104 taccagttgtgccagggttac 124  Q
    ||||||||| |||| ||||||    
T  12914191 taccagttgcgccaaggttac 12914211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 8247751 - 8247865
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| | ||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  8247751 ttggtgtattgtacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccag 8247850  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  8247851 ttgcgccaaggttac 8247865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 13730666 - 13730780
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||  ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  13730666 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccag 13730765  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  13730766 ttgcgccaaggttac 13730780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 46421099 - 46421213
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| |||||||||||||   ||||||| ||||||||||||||||    
T  46421099 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttaccag 46421198  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  46421199 ttgcgccaaggttac 46421213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 4495717 - 4495828
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||  || | ||| |||||||| ||||||||||||| | ||||||| |||||||    
T  4495717 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcacatgacaacaa 4495816  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  4495817 ctttaccagttg 4495828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 13628854 - 13628969
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaac-tttacca 108  Q
    ||||||||||||||| ||||||||||| ||| ||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||| |||||||    
T  13628854 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacca 13628953  T
Q  109 gttgtgccagggttac 124  Q
    ||||||||| ||||||    
T  13628954 gttgtgccaaggttac 13628969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 26869810 - 26869700
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||| || || |||||||||||||| |||| |||||||| | ||||||| |||||||    
T  26869810 tcccaccatttggtgtattgtacgcagccttaccctgttttt-acaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 26869712  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  26869711 ctttaccagttg 26869700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 26573231 - 26573125
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||||| | || |||||||||||||| ||||||||||||| | ||||| | |||||||    
T  26573231 tcccaccaattggtgtattgtacgcagccttaccctgttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 26573132  T
Q  101 ctttacc 107  Q
    |||||||    
T  26573131 ctttacc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 29366784 - 29366898
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||| ||||| || |||||||||||||| |||||||||||||   ||||||| ||||||||||||||||    
T  29366784 ttggtgtattgtacgcagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttaccag 29366883  T
Q  110 ttgtgccagggttac 124  Q
    ||  |||| ||||||    
T  29366884 ttacgccaaggttac 29366898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 1217192 - 1217071
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||| ||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | || |||| || ||||    
T  1217192 tcccgccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaa 1217095  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  1217094 ctttaccagttgcgccaaggttac 1217071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 39203618 - 39203497
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||  ||||||| || |||||| ||||||| |||| |||||||| | ||||||| |||||||    
T  39203618 tcccaccatttggtgtattgtacgcaaccttaccctgtttt--acacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaa 39203521  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||| |||||||||| ||||||    
T  39203520 ctttacaagttgtgccaaggttac 39203497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 124
Target Start/End: Original strand, 7696945 - 7697061
Alignment:
Q  6 ccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttta 105  Q
    ||||||||||||||||||| ||||||||||| ||||  ||||||| |  |||||||||||||| |||||||||||||   ||||||| ||||||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaacttta 7697042  T
Q  106 ccagttgtgccagggttac 124  Q
    ||||||| |||| ||||||    
T  7697043 ccagttgcgccaaggttac 7697061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 16735544 - 16735422
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||   ||||| || |||||| ||||||| |||||||||| || | ||||||| |||||||    
T  16735544 tcccaccatttggtgtattgtacgcagccttaccctgtttttct-acaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaa 16735446  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  16735445 ctttaccagttgcgccaaggttac 16735422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 22609869 - 22609748
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || |||||||| ||||| ||||||| ||||| | ||||||| |||||||    
T  22609869 tcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaa 22609771  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||||||| |||| |||| ||||||    
T  22609770 ctttacc-gttgcgccaaggttac 22609748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 54032612 - 54032703
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    |||||||||| ||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||    
T  54032612 tcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacat 54032703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 34420696 - 34420802
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||| | ||||||    
T  34420696 tcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaaca 34420795  T
Q  100 actttac 106  Q
    |||||||    
T  34420796 actttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45948891 - 45948972
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||| ||||||||||||| | ||||||||||||||||||||||||| |||||||||||||| || |||||||||||||    
T  45948891 tcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgtttccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 22122970 - 22123091
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| |  |||||||||||||| |||||| |||||| | ||||||| |||||||    
T  22122970 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaa 22123067  T
Q  101 ctttaccagttgtgccagggttac 124  Q
     ||||||||| | |||| ||||||    
T  22123068 atttaccagtggcgccaaggttac 22123091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 10870025 - 10870127
Alignment:
Q  21 tacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccaggg 120  Q
    |||| ||||||||||| |||| |||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||||| |||| ||    
T  10870025 tacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaagg 10870123  T
Q  121 ttac 124  Q
    ||||    
T  10870124 ttac 10870127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 45620881 - 45620988
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt-ttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||| ||||||||||||||| ||||||||||| |||| ||||||||| || ||||||||| |||| ||||||||||||| | ||||| | ||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T
Q  100 actttacc 107  Q
    ||||||||    
T  45620981 actttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 52926272 - 52926386
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||         |||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  52926272 tcccaccatttggtgtattgtacgcagccttac---------tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 52926362  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  52926363 ctttaccagttgcgccaaggttac 52926386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 9607298 - 9607184
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    |||||||||| |||| ||||||||||| |||||||| |||| || |||||||||||||| ||||  ||||||| | ||||||| ||||||||||||| ||    
T  9607298 ttggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttacaag 9607199  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  9607198 ttgcgccaaggttac 9607184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 53996618 - 53996725
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||||||| | ||||||||||| ||||||||||||| ||||||||||| ||||| ||| ||||||||| | |||| || ||||||    
T  53996618 tcccaccattttggtgtattgtaagcagccttaccctgttttttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaaca 53996717  T
Q  100 actttacc 107  Q
    | ||||||    
T  53996718 aatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 54374398 - 54374480
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||||||||| ||||| |||| ||||||||    
T  54374398 tcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtttccaagacttgaacctgtgacctt 54374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 7943094 - 7942993
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||| ||||||||||| || |||||||| ||||||| |||||  | |||||||||||||| || |||||||||| | ||||||| |||||||    
T  7943094 tcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaa 7942995  T
Q  101 ct 102  Q
    ||    
T  7942994 ct 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 516505 - 516417
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaa 97  Q
    |||||| |||||| || ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||    
T  516505 tttggtttattgtgcgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 6411875 - 6411985
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||| |||||||||||||||||| |||||||||||  |||||||||||| || ||||| || ||||| ||||| ||||||  | || |||| |||||||    
T  6411875 tcccatcatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaa 6411973  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  6411974 ctttaccagttg 6411985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 5173811 - 5173897
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaac-tttaccagttgtgccagggttac 124  Q
    |||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| |||||||| ||||| ||||| |||| ||||||    
T  5173811 tttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttac 5173897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29106653 - 29106576
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtga 78  Q
    |||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||||||| || |||||  ||||||||    
T  29106653 tcccacaatttggtgtattgtacgtaaccttatcctattttttacacaagaggttgttttcaagacttgtacccgtga 29106576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 10795486 - 10795554
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtg 77  Q
    |||||||||||||||| ||||||||||| | ||||||||||| || |||||||||||||| ||||||||    
T  10795486 tttggtgtattgtacgcagccttaccctgtcttttacacaagaggctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31592951 - 31592878
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgt 76  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||||| |||||||    
T  31592951 tcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 14987052 - 14986989
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacc 73  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| ||||    
T  14987052 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacc 14986989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 45139539 - 45139622
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    |||||||||||||| | ||||||||||| | ||||||||||| |||||||||||  |||| ||||||||||||| | |||||||    
T  45139539 tttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacat 45139622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 30928200 - 30928302
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||| ||| |||||||||| |||  | ||||||| | ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||| ||    
T  30928200 tcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaa 30928299  T
Q  101 ctt 103  Q
    |||    
T  30928300 ctt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 52428532 - 52428612
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccag-gacttcaacccgtgacctt 82  Q
    |||| ||||||||||||||||| ||||||||||| | ||||||||||| || || |||||| ||||| |||||||||||||    
T  52428532 ccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgcttccagagacttaaacccgtgacctt 52428612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 9276366 - 9276319
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaag 50  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||    
T  9276366 ccaccatttggtgtattgtacgcagccttaccctgttttttacacaag 9276319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25517223 - 25517348
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggact--tcaacccgtgaccttgctgtcacattacaa 97  Q
    ||||||||||| |||||||||||| |||| || | | |||||| ||||||| || |||||||||| |   ||| || |||||||| | ||||||| ||||    
T  25517223 tcccaccattttgtgtattgtacgcagccatatcttgtttttttacacaagaggatgtttccaggtcccatcatcctgtgaccttccagtcacatgacaa 25517322  T
Q  98 caactttaccagttgtgccagggtta 123  Q
    ||||||||||||||| |||| |||||    
T  25517323 caactttaccagttgcgccaaggtta 25517348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 25944574 - 25944468
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||||||||  |||||| |||  |||||||||| || ||  ||||||||||||| ||||| ||||||| | ||||| | ||||||    
T  25944574 tcccaccattttggtgtattgtactcagccttgcccagttttttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaaca 25944475  T
Q  100 actttac 106  Q
    |||||||    
T  25944474 actttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 1121286 - 1121359
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||||||||||| || || ||| ||||| |||||||||  |||||||||||||||| ||| |||||||||    
T  1121286 tttggtgtattgtacgcagtctcaccttatttcttacacaagaagttgtttccaggacttaaacacgtgacctt 1121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 26782464 - 26782363
Alignment:
Q  7 catttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttac 106  Q
    ||||||||||||| ||   ||| ||||||||||||||||||||| | ||||||| ||||||| || |||||||||| |  || ||| |||| ||||||||    
T  26782464 catttggtgtattttatacagcattaccctattttttacacaagagattgtttcaaggacttgaatccgtgacctttcaatcgcatgacaataactttac 26782365  T
Q  107 ca 108  Q
    ||    
T  26782364 ca 26782363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 39212081 - 39211992
Alignment:
Q  14 tgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactt 103  Q
    ||||||||||| || |||||| | || |||||||||| |||| |||||||||||| |||||||||| || | ||||||| || |||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagaggttatttccaggacttgaacccgtgacatttcagtcacataacgacaactt 39211992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43114921 - 43114990
Alignment:
Q  1 tcccaccatttggtgtattgtacgtag-ccttaccct-attttttacacaagcggttgtttccaggactt 68  Q
    |||||||||||||||||||||| |||| |||||||||  ||||||||||||| || ||||||||||||||    
T  43114921 tcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgtttccaggactt 43114990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 54484795 - 54484730
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct-attttttacacaagcggttgtttccagga 65  Q
    |||||||||||||||||||||||| ||||||||| |  ||||||||||||| || |||||||||||    
T  54484795 tcccaccatttggtgtattgtacgcagccttaccttgtttttttacacaagaggctgtttccagga 54484730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 33926187 - 33926096
Alignment:
Q  1 tcccaccatt-tggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    |||||||||| |||||||||||||  ||||||||||| ||||| ||||||| || | |||||||||||| ||||| ||||||| | |||||||    
T  33926187 tcccaccattatggtgtattgtacacagccttaccctgttttt-acacaagaggctatttccaggacttgaacccatgacctttcagtcacat 33926096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 49013537 - 49013589
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttcca 62  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || ||||||||    
T  49013537 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcca 49013589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 31 - 107
Target Start/End: Complemental strand, 53062112 - 53062036
Alignment:
Q  31 taccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||| ||||| ||||| | || |||||||||||||| ||| ||||||||| | ||||||| ||||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 21875111 - 21875013
Alignment:
Q  8 atttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttac 106  Q
    |||| |||||||||||| ||||||||||| |||||| ||||||| |||||||||||| | || |||||||       | ||||||| |||||||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaacccgt-------cagtcacatgacaacaactttac 21875019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19731106 - 19731000
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||| | ||||||||||||| | ||||||| | ||||||||||||| || | ||||||||||||  | |||||||||| |  |||| | |||||||    
T  19731106 tcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaa 19731007  T
Q  101 ctttacc 107  Q
     ||||||    
T  19731006 atttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 45786277 - 45786327
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgttt 59  Q
    |||||||||||||||| ||||||||||| ||||||||||||| || |||||    
T  45786277 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 47624145 - 47624088
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgttt 59  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||| || |||||    
T  47624145 tcccaccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 31904910 - 31904975
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggac 66  Q
    |||||||||||||||||||||||| || | |||||| ||||||||| ||  || ||||||||||||    
T  31904910 tcccaccatttggtgtattgtacgcagtcataccctgttttttacataataggctgtttccaggac 31904975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 12525486 - 12525391
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    |||||||||||  |||||||||||| || |||||||||||||  |||| |||||||| | ||||   ||  |||||||||||||||| |||| ||||||    
T  12525486 agccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttcagtca---tatgacaactttaccagttgcgccaaggttac 12525391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15797324 - 15797284
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  15797324 tcccaccatttggtgtattgtacgcagccttaccctgtttt 15797284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34771417 - 34771457
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  34771417 tcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 31831297 - 31831241
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccag 63  Q
    |||||||||||||||||| | ||||||||||||  ||||||||||| || |||||||||    
T  31831297 accatttggtgtattgtatgcagccttacccta--ttttacacaagaggctgtttccag 31831241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 33235636 - 33235526
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct-attttttacacaagcggttgtttccaggacttcaacccgtgaccttgc-tgtcacattacaac 98  Q
    ||||||||||| |||||||||||  || ||||||||  ||||||||||||| || | ||| || || || |||  |||||||| | |||||||| |||||    
T  33235636 tcccaccatttagtgtattgtacacagtcttaccctgtttttttacacaagaggctctttacacgatttgaacttgtgacctttcatgtcacatgacaac 33235537  T
Q  99 aactttaccag 109  Q
    |||||||||||    
T  33235536 aactttaccag 33235526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 35417988 - 35417914
Alignment:
Q  33 ccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||| ||||||||||||| || ||||||||||| || ||| ||||||||  | ||||||| | ||||||||||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc 35417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 47
Target Start/End: Original strand, 353413 - 353450
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacac 47  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  353413 ttggtgtattgtacgcagccttaccctgttttttacac 353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 19751682 - 19751601
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||| | ||||||||||||| | ||||||| |  |||||||||||| || | ||||||||||||  | ||||||||||    
T  19751682 tcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggctatttccaggacttgcatccgtgacctt 19751601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 52952590 - 52952529
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttcca 62  Q
    |||||| ||||||||||||||||  || |||| | ||||||||||| ||| |||||||||||    
T  52952590 tcccactatttggtgtattgtacacagtcttatcatattttttacataagaggttgtttcca 52952529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 55401281 - 55401208
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacc 73  Q
    ||||||||||| |||||||| |||| || |||| ||| ||||||||||||| || ||||| |||||||| ||||    
T  55401281 tcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggacttgaacc 55401208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19426942 - 19427058
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  19426942 tcccaccatttggtgtattgtacgcagtcttaccctattttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaa 19427041  T
Q  101 ctttaccagttgtgcca 117  Q
    |||||||||||| ||||    
T  19427042 ctttaccagttgcgcca 19427058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 11617641 - 11617752
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||||||||||||| |||| |||||||| | ||||||| |||||||    
T  11617641 tcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 11617740  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  11617741 ctttaccagttg 11617752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 46354267 - 46354153
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| |  |||||| ||||||||||||||||    
T  46354267 ttggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttaccag 46354168  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  46354167 ttgcgccaaggttac 46354153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 2541072 - 2541196
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacc-ttgctgtcacattacaaca 99  Q
    |||||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||| || | ||||||| ||||||    
T  2541072 tcccaccatttggtgtatagtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaaca 2541171  T
Q  100 actttaccagttgtgccagggttac 124  Q
    ||||||||||||| |||| ||||||    
T  2541172 actttaccagttgcgccaaggttac 2541196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 42798751 - 42798628
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||| |  |||||||| ||||| ||||||||||||| | ||||||| |||||||    
T  42798751 tcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaa 42798652  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  42798651 ctttaccagttgcgccaaggttac 42798628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 47716532 - 47716418
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | |||||||  |||||||||| ||||    
T  47716532 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttttccag 47716433  T
Q  110 ttgtgccagggttac 124  Q
    |||||||| ||||||    
T  47716432 ttgtgccaaggttac 47716418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8148998 - 8149122
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttta-cacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||||||||||||||| | ||||||||||||||||| |||||| ||| |||| |||||||| ||| |||||| |||| ||||||| ||||||    
T  8148998 tcccaccatttggtgtattgtacgcaaccttaccctattttttaacacaagaggtagttttcaggacttgaactcgtgactttgcagtcacatgacaaca 8149097  T
Q  100 actttaccagttgtgccagggttac 124  Q
    || ||||||||||||||| ||||||    
T  8149098 acattaccagttgtgccaaggttac 8149122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21172062 - 21172183
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | || |||| |||||||    
T  21172062 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaa 21172159  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  21172160 ctttaccagttgcgccaaggttac 21172183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 27629716 - 27629600
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | |||| || |||||||    
T  27629716 tcccaccatttggtgtattttacgcaaccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaa 27629617  T
Q  101 ctttaccagttgtgcca 117  Q
    |||||||||||| ||||    
T  27629616 ctttaccagttgcgcca 27629600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 10693126 - 10693245
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  10693126 tcccaccatttggtgtattgtacgcagccttaccctctttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 10693223  T
Q  101 ctttaccagttgtgccagggtt 122  Q
    |||||| ||||| |||| ||||    
T  10693224 ctttactagttgcgccaaggtt 10693245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 42805597 - 42805483
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||  ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  42805597 ttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccag 42805498  T
Q  110 ttgtgccagggttac 124  Q
    ||  |||| ||||||    
T  42805497 ttacgccaaggttac 42805483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 48735175 - 48735297
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttcca-ggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||||||||||||||| ||||||||| | ||||  ||||||| ||||||||||| |||||| ||||||||||||| | ||||||| ||||||    
T  48735175 tcccaccatttggtgtattgtacgcagccttaccgtgtttt--acacaagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaaca 48735272  T
Q  100 actttaccagttgtgccagggttac 124  Q
    ||||||||||||| |||| ||||||    
T  48735273 actttaccagttgcgccaaggttac 48735297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 32758341 - 32758220
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||  ||||||||||| ||||  ||||||| || |||||||||||||| |||| |||||||| | ||||||| |||||||    
T  32758341 tcccaccatttggtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 32758244  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  32758243 ctttaccagttgcgccaaggttac 32758220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 33871963 - 33872070
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||||||||| |||||| |||||| | ||||||| |||||||    
T  33871963 tcccaccatttggtgtattgtacgcagccttatcctgtttt-tacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaa 33872061  T
Q  101 ctttaccag 109  Q
    |||||||||    
T  33872062 ctttaccag 33872070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 43557545 - 43557443
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| |||||||| || ||||||||||||| || |||||||||||||| ||||| ||||||| | ||||||| ||||||||||||||||    
T  43557545 ttggtgtattgtacgcagccttactctgttttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccag 43557446  T
Q  110 ttg 112  Q
    |||    
T  43557445 ttg 43557443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14099059 - 14099165
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || |||| ||| ||||||||||||  || | |||||||||||||||||| ||||||| | ||||||| |||||||    
T  14099059 tcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaa 14099158  T
Q  101 ctttacc 107  Q
    |||||||    
T  14099159 ctttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 14409076 - 14409182
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || |||| ||| ||||||||||||  || | |||||||||||||||||| ||||||| | ||||||| |||||||    
T  14409076 tcccaccatttggtgtattgtacgcagtcttaacctgttttttacacaaaaggctatttccaggacttcaacccatgacctttcagtcacatgacaacaa 14409175  T
Q  101 ctttacc 107  Q
    |||||||    
T  14409176 ctttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19265896 - 19265791
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||| |||| ||||| ||||||||||||| | ||||| | |||||||    
T  19265896 tcccaccatttggtgtattgtacgcagccttaccctcttttt-acacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaa 19265798  T
Q  101 ctttacc 107  Q
    |||||||    
T  19265797 ctttacc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 7879720 - 7879639
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||||||||||||||||||| ||||||||| | ||||||||||||| | ||||||||||||||| |||||||||||||    
T  7879720 tcccaccatttggtgtattgtacgcagccttaccttgttttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 47077908 - 47078029
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||| |||||||||||| | | |||| |||||||  ||||||| |  |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  47077908 tcccaccattttgtgtattgtacgcaactttactctatttt--acacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 47078005  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  47078006 ctttaccagttgcgccaaggttac 47078029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23419727 - 23419833
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||| || ||||||||| |||| |||| ||||||||   ||||||| ||| |||    
T  23419727 tcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaa 23419826  T
Q  101 ctttacc 107  Q
    |||||||    
T  23419827 ctttacc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29907502 - 29907393
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat--tacaa 97  Q
    ||||||||||| ||||||||| ||| |||||||| |||||||||||||||| || |||||| ||||||| ||||||||||||| | |||||||  |||||    
T  29907502 tcccaccattttggtgtattgaacgcagccttacactattttttacacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaa 29907403  T
Q  98 caactttacc 107  Q
    ||||||||||    
T  29907402 caactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 40463958 - 40463837
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||||||||||| |||| |||||||||| | |||||||||||| |  |||||| | ||||| ||||||||||||| | ||||||| |||||||    
T  40463958 tcccaccatttggtgtattatacgcagccttaccc-agtttttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaa 40463860  T
Q  101 ctttaccagttgtgccagggtta 123  Q
    ||||||| |||| |||| |||||    
T  40463859 ctttaccggttgcgccaaggtta 40463837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 2662988 - 2663107
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||| || |||||||||||||| ||||  ||||  | | ||||||| |||||||    
T  2662988 tcccaccatttggtgtattgtacgcagccttacccta--ttttacacaagaggctgtttccaggacttgaacctatgac--tccagtcacataacaacaa 2663083  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||| ||||| |||| ||||||    
T  2663084 ctttactagttgcgccaaggttac 2663107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18512506 - 18512586
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||||| ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| |||||||||||||    
T  18512506 tcccaccattcggtgtattgtacgcagccttacccta-tttttacacaagatgttgtttccaggacttgaacccgtgacctt 18512586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42391153 - 42391251
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  |||||||  | |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  42391153 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 42391250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 7645030 - 7644931
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    ||||||||||||||||    |||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||| ||||||||| |||||||    
T  7645030 tttggtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 22699031 - 22699134
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| || |||||||| ||||||||||||| |  | |||||||||||| ||||| | ||||| | ||||||| |||||||||||||||    
T  22699031 tttggtgtattgtacgcagtcttaccctgttttttacacaagagactatttccaggacttgaacccataacctttcagtcacatgacaacaactttacca 22699130  T
Q  109 gttg 112  Q
    ||||    
T  22699131 gttg 22699134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 35334869 - 35334989
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||| ||||||||||||  || |||||||| |||||||||| ||    |||||||||||||| ||| ||||||||| | ||||||| |||||||    
T  35334869 tcccaccattcggtgtattgtacacagtcttaccctgttttttacacgagac--tgtttccaggacttgaactcgtgaccttccagtcacatgacaacaa 35334966  T
Q  101 ctttaccagttgtgccagggtta 123  Q
    |||||||||||| |||| |||||    
T  35334967 ctttaccagttgcgccaaggtta 35334989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 7193142 - 7193044
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    ||||||||| |||| |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||| ||||||||||||| ||||  |||| ||||||    
T  7193142 agccttaccatattgtttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttac 7193044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 19266532 - 19266426
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||| |||| || | ||| |||||||| |||||  |||||| | ||||||| |||||||    
T  19266532 tcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggacttgaacccacgacctttcagtcacatgacaacaa 19266433  T
Q  101 ctttacc 107  Q
    |||||||    
T  19266432 ctttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 28362198 - 28362304
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| |||||||||   ||||||||||||| ||  ||||| ||||||| |||| |||||||| | | ||||| |||||||    
T  28362198 tcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaacaa 28362297  T
Q  101 ctttacc 107  Q
    |||||||    
T  28362298 ctttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 16341352 - 16341279
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||||||||||||||||||||||| ||||||||||||| || |||||| || |||| |||||||||||||    
T  16341352 tttggtgtattgtacgtagccttaccctgttttttacacaagaggctgtttctagaacttgaacccgtgacctt 16341279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 11741875 - 11741774
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||||  |||||||| ||  | ||||| |||||||| ||||| ||||||| | ||||||| |||||||    
T  11741875 tcccaccatttggtgtattgtacgcagccttacccta--ttttacactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaa 11741778  T
Q  101 cttt 104  Q
    ||||    
T  11741777 cttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 12473378 - 12473270
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| | ||||||||| ||||| ||||||| |||||||| |||||||| ||||| ||||||| | |  |||| ||||||||||||||     
T  12473378 tttggtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttcagatacatgacaacaactttaccg 12473279  T
Q  109 gttgtgcca 117  Q
    |||| ||||    
T  12473278 gttgcgcca 12473270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13805183 - 13805077
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||  ||||||||||  | |||||||| || || | |||||||||||| ||||||| ||||| | ||||||| |||||||    
T  13805183 tcccaccatttggtgtattgtacacagccttacccc-tgttttacaccagaggctatttccaggacttgaacccgttacctttcagtcacatgacaacaa 13805085  T
Q  101 ctttacca 108  Q
    ||||||||    
T  13805084 ctttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 14732884 - 14732998
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||| ||| ||||||||||| |||||||||   | || |||||||||||||| ||||| |||| || | ||||||| |||||||||||||||    
T  14732884 tttggtgtattg-acgcagccttaccctgttttttacatgggaggctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttacca 14732982  T
Q  109 gttgtgccagggttac 124  Q
    |||| |||| ||||||    
T  14732983 gttgcgccaaggttac 14732998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 34626261 - 34626371
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||||| | || |||||||||||||| || | ||| |||| |  |||||| |||||||    
T  34626261 tcccaccatttggtgtattgaacgcagccttaccct-gtttttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaa 34626359  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  34626360 ctttaccagttg 34626371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 42476953 - 42476845
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||| | ||||  ||||||| |  ||||||||| |||| || ||||||||||   ||||||| |||||||    
T  42476953 tcccaccatttggtgtattgtacgcagccttaccttgtttt--acacaagagactgtttccagaacttgaatccgtgaccttttagtcacatgacaacaa 42476856  T
Q  101 ctttaccagtt 111  Q
    |||||||||||    
T  42476855 ctttaccagtt 42476845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 7794596 - 7794670
Alignment:
Q  38 ttttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttg 112  Q
    ||||||||| ||| || |||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||||    
T  7794596 ttttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttaccagttg 7794670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 18327090 - 18326993
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    ||||||||||| ||||| ||||||| || ||||||| |||||| |||||||||||||   ||||||| ||||||||||||||||||| |||| ||||||    
T  18327090 agccttaccctgttttt-acacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttac 18326993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 48123537 - 48123643
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||| | ||  ||||||| || |||||||||| || |||||||||||||| ||||| ||||||| | | ||||| | |||||    
T  48123537 tcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttcagacacatgataacaa 48123636  T
Q  101 ctttacc 107  Q
    |||||||    
T  48123637 ctttacc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38262249 - 38262342
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatta 94  Q
    ||||| |||||||||||||||| | | | ||||| ||||||||||||||| |  |||||||||||||| ||||||||||||| | |||||||||    
T  38262249 tcccatcatttggtgtattgtatgcaacattaccatattttttacacaagagactgtttccaggacttgaacccgtgaccttccagtcacatta 38262342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 42495926 - 42496011
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    |||||| ||||| || |||||||||||||| ||||||||||||| | |||| || ||||||||||||||||||| |||| ||||||    
T  42495926 tttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttac 42496011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 1423972 - 1424079
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    |||||||| |||| | ||| ||||||| ||||||||||||  |  ||||||||||| || || |||||||||| | ||||||| ||||||||||||||||    
T  1423972 ttggtgtagtgtatgcagcattaccctgttttttacacaacagactgtttccaggatttgaatccgtgaccttccagtcacataacaacaactttaccag 1424071  T
Q  110 ttgtgcca 117  Q
    ||| ||||    
T  1424072 ttgcgcca 1424079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 5180218 - 5180321
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||| ||||||  || |||||||| ||||| ||||||| || ||||||||| | || ||||| ||||||| | ||||||| |||||||||||||||    
T  5180218 tttggtgtgttgtacacagtcttaccctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtcacatgacaacaactttacca 5180317  T
Q  109 gttg 112  Q
    ||||    
T  5180318 gttg 5180321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 28078185 - 28078307
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||| | | | ||||||||| ||||||  ||| | |  |||||| ||||||| ||||||||||||| | ||||||| |||||||    
T  28078185 tcccaccatttggtgtattgcatgcaaccttaccctgttttttt-acacgagactgtttctaggacttgaacccgtgaccttacagtcacatgacaacaa 28078283  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||| || ||||| |||||||||||    
T  28078284 cttcacgagttgcgccagggttac 28078307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 32233188 - 32233268
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||||||||| | ||||  |||||||||| |||| |||||||| ||||||||||||||||| ||||| |||||||    
T  32233188 tcccaccatttggtgtaatatacgctgccttaccctgtttt-tacacaagaggttgtttccaggacttgaacccatgacctt 32233268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Complemental strand, 6736969 - 6736867
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    |||||||||||||||||||| | || |||||| | ||||| | ||||| ||||||||  ||||||| ||||||||||||| | ||| ||| |||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttgttttt-atacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaact 6736871  T
Q  103 ttac 106  Q
    ||||    
T  6736870 ttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31591162 - 31591241
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||||||  ||||||||||| |||||||| || ||||  ||||||| ||||||||||||||||| ||| |||||||||    
T  31591162 tcccaccatttattgtattgtacgcagccttactctgtttt--acacaagaggttgtttccaggacttgaactcgtgacctt 31591241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 5814528 - 5814447
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||||||||||||||| ||| |||| ||||||  |||| |||||||||| || |  |||||| ||||||||||||||    
T  5814528 agccttaccctattttttacataagaggttctttccaaaacttgaacccgtgactttccaatcacataacaacaactttacc 5814447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 35203513 - 35203440
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||| ||||||||| || |||| ||| ||||||||||||| |  |||||||||||||| |||||||||||||    
T  35203513 tttggtatattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctt 35203440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 38604605 - 38604546
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagg 64  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||| || ||||||||||    
T  38604605 caccatttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgtttccagg 38604546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 1408539 - 1408472
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    |||||||||||| ||||||||||  ||||||||| | ||||||||||||| || | ||||||||||||    
T  1408539 tcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggctatttccaggactt 1408472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 18747569 - 18747487
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct-attttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||| |||||||||| |||| |||||||||||  ||||||||||||  || |||||||| ||||| | |||||||||||    
T  18747569 tcccaccaattggtgtattatacgcagccttaccctgcttttttacacaaaaggctgtttccaagacttgatcccgtgacctt 18747487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 43852111 - 43852047
Alignment:
Q  14 tgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgac 79  Q
    |||||||||| |||||||||||| ||||||||| ||| |||| ||| |||||||| ||||||||||    
T  43852111 tgtattgtacatagccttaccctgttttttacagaagaggtt-ttttcaggacttgaacccgtgac 43852047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23231639 - 23231573
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggact 67  Q
    ||||| |||| |||||||| |||| ||||||||| ||| ||||||||||| || | |||||||||||    
T  23231639 tcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggact 23231573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 3469238 - 3469338
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctatttt--ttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttac 106  Q
    |||||||||||||||| | || |||||| ||||  ||||||||| |  |||||| ||||||| |  | |||||||| | ||||||| |||||||||||||    
T  3469238 tttggtgtattgtacgcaaccgtaccctgttttttttacacaagagaatgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttac 3469337  T
Q  107 c 107  Q
    |    
T  3469338 c 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 17048877 - 17048914
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttaca 46  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  17048877 tttggtgtattgtacgtaaccttaccctgttttttaca 17048914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 39 - 107
Target Start/End: Original strand, 44123712 - 44123780
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||| || ||||||||| |||| ||||||| | ||| | ||||||| ||| ||||||||||    
T  44123712 tttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8455369 - 8455492
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  8455369 tcccaccatttggtgtattgtacgcagccttaccctgtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 8455468  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  8455469 ctttaccagttgcgccaaggttac 8455492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12023972 - 12024094
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  12023972 tcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 12024070  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  12024071 ctttaccagttgcgccaaggttac 12024094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 17668082 - 17667971
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||| |||| |||||||||||| ||||||||||||| | ||||||| |||||||||    
T  17668082 ccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaact 17667983  T
Q  103 ttaccagttgtg 114  Q
    ||||||||||||    
T  17667982 ttaccagttgtg 17667971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 14530391 - 14530277
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||||||||||||||| ||||||| ||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  14530391 ttggtgtattgtacgtagccttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccag 14530292  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  14530291 ttgcgccaaggttac 14530277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 17623644 - 17623531
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    |||||||||||||||||||||| |||||||||||  |||||||||||| ||||||||| ||||||| ||||||||||||| | ||| ||| |||||||||    
T  17623644 ccaccatttggtgtattgtacgcagccttaccctgatttttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaact 17623545  T
Q  103 ttaccagttgtgcc 116  Q
    ||||||||||||||    
T  17623544 ttaccagttgtgcc 17623531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 23397846 - 23397737
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| || |||||||||||||| ||||| ||||||| | ||||||| |||||||    
T  23397846 tcccaccatttggtgtattgtacgtagccttaccctatttt--acacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 23397749  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  23397748 ctttaccagttg 23397737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 11514518 - 11514395
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||  | ||||||||||||| || ||||||||||| || ||||||||||||| | ||||||| |||||||    
T  11514518 tcccaccatttggtgtattgtacgcagccttactttgttttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaa 11514419  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  11514418 ctttaccagttgcgccaaggttac 11514395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 17896342 - 17896230
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||||| ||||||||| ||||||| || |||||||||| | ||||||| ||||||    
T  17896342 tcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaaca 17896243  T
Q  100 actttaccagttg 112  Q
    |||||||||||||    
T  17896242 actttaccagttg 17896230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 10543772 - 10543657
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||  ||||||||||||| ||||||||||||| | ||||||| |||||||||||| ||    
T  10543772 tttggtgtattgtacgcagccttaccctgttttttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatca 10543673  T
Q  109 gttgtgccagggttac 124  Q
    |||| |||| ||||||    
T  10543672 gttgcgccaaggttac 10543657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 24200686 - 24200789
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| |||||||||| || | ||||||| |||||||||||||||    
T  24200686 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacca 24200785  T
Q  109 gttg 112  Q
    ||||    
T  24200786 gttg 24200789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 19977767 - 19977890
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||| ||| || ||||||||| |||| ||||||||||||| | ||||||| |||||||    
T  19977767 tcccaccatttggtgtattgtacgcaaccttatcctattttttacaaaagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaa 19977866  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||| |||||||  |||| ||||||    
T  19977867 cttcaccagttccgccaaggttac 19977890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 22371136 - 22371016
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||   ||| | || |||||||||||||| ||||||||||||  | ||||||| |||||||    
T  22371136 tcccaccatttggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaa 22371040  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  22371039 ctttaccagttgggccaaggttac 22371016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 21779314 - 21779435
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||  ||||||| || ||| |||||||||| ||||||||||||| | ||||||| |||||||    
T  21779314 tcccaccatttggtgtattgtacgcaaccttaccctgtttt--acacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaa 21779411  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||| |||||||| |||| ||||||    
T  21779412 cttcaccagttgcgccaaggttac 21779435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 25079770 - 25079894
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt-ttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||| ||||||||||||| | ||||||| | |||| ||||||||| ||||||||| | ||||| ||||||||||||| | ||||||| ||||||    
T  25079770 tcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaaca 25079869  T
Q  100 actttaccagttgtgccagggttac 124  Q
    ||||||||||||| |||| ||||||    
T  25079870 actttaccagttgcgccaaggttac 25079894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 25249791 - 25249913
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||| | ||||||| |  |||||||| ||||| ||||||||||||| | ||||||| |||||||    
T  25249791 tcccaccatttggtgtattgtacgcagccttaccctgtttgt-acacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaa 25249889  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||| ||| |||| ||||||    
T  25249890 ctttaccaattgcgccaaggttac 25249913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 5450368 - 5450263
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||| |||||||||||||||| ||||||||| | |||||| ||||||| |||||||||||||| || ||||||||||||| | ||||||| ||||||    
T  5450368 tcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttcagtcacatgacaaca 5450269  T
Q  100 acttta 105  Q
    ||||||    
T  5450268 acttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 7214604 - 7214500
Alignment:
Q  13 gtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttg 112  Q
    |||||||||||| ||||||||||| | ||||||||||| |  |||||||| ||||| ||||| ||||||| | ||||||| |||||||||||||||||||    
T  7214604 gtgtattgtacgcagccttaccctgtattttacacaagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttaccagttg 7214505  T
Q  113 tgcca 117  Q
    |||||    
T  7214504 tgcca 7214500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 32781341 - 32781448
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||| ||||||||||  ||||| ||| ||||||||| | |  ||||| ||||||    
T  32781341 tcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttccgagacttgaactcgtgacctttcagcaacattgcaacaa 32781440  T
Q  101 ctttacca 108  Q
    ||||||||    
T  32781441 ctttacca 32781448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 40416924 - 40417031
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||| || ||||||||||||||  |||||| |||| ||||||| ||||| ||||||||||| ||||| ||||||||||||| | ||||||| |||||||    
T  40416924 tcccatcaattggtgtattgtacacagcctttccctgttttttatacaagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaa 40417023  T
Q  101 ctttacca 108  Q
    ||||||||    
T  40417024 ctttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 9671261 - 9671139
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgac-cttgctgtcacattacaaca 99  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||| || ||||||||||| || ||||||||||  || | ||||||| ||||||    
T  9671261 tcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaaca 9671164  T
Q  100 actttaccagttgtgccagggttac 124  Q
    |||||||| |||| |||| ||||||    
T  9671163 actttaccggttgcgccaaggttac 9671139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 39914358 - 39914467
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt-ttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||| ||||||||||||  | ||||||||| |||| ||||||||| |||||||||||| |||| | ||||||||||| | ||||||| ||||||    
T  39914358 tcccaccattcggtgtattgtacacatccttaccctgtttttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaaca 39914457  T
Q  100 actttaccag 109  Q
    ||||||||||    
T  39914458 actttaccag 39914467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 10546245 - 10546153
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct-attttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    |||||||||||||||||||||||| |||||||||||  ||||||| ||||| || |||||||||||||| ||||||||||||| | |||||||    
T  10546245 tcccaccatttggtgtattgtacgcagccttaccctgtttttttatacaagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 14 - 105
Target Start/End: Complemental strand, 5841097 - 5841006
Alignment:
Q  14 tgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttta 105  Q
    ||||||||||| | ||||||||||||||||||||||  || |||||| ||||||| ||||||||||||| | ||||||| ||||||||||||    
T  5841097 tgtattgtacgcatccttaccctattttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 21377126 - 21377232
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||||||| |||||||  ||||||||||| ||||||||||||| || |||||| | ||||| ||| ||| ||||| | ||||||| |||||||    
T  21377126 tcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaa 21377225  T
Q  101 ctttacc 107  Q
    |||||||    
T  21377226 ctttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23145751 - 23145857
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||| ||||||||||||||| |||||||| || ||||||||||||| |  ||||| || ||||| ||||||||||||| | |||||  ||||||||    
T  23145751 tcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaa 23145850  T
Q  101 ctttacc 107  Q
    |||||||    
T  23145851 ctttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 23557541 - 23557647
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||| ||||||||||||||| |||||||| || ||||||||||||| |  ||||| || ||||| ||||||||||||| | |||||  ||||||||    
T  23557541 tcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttcagtcacgctacaacaa 23557640  T
Q  101 ctttacc 107  Q
    |||||||    
T  23557641 ctttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 14444810 - 14444718
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatta 94  Q
    |||||||||||||||||| ||||  ||||||||||| ||||| ||||||| || |||||||||||||| ||||||||||||| | |||||||||    
T  14444810 tcccaccatttggtgtatcgtacacagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatta 14444718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 112
Target Start/End: Complemental strand, 17705567 - 17705466
Alignment:
Q  11 tggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagt 110  Q
    |||||||||||||  |||||||| || || |||||||||| ||  ||||||||||||| |||||||||||||   ||||||| |||||||||||||||||    
T  17705567 tggtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttaccagt 17705468  T
Q  111 tg 112  Q
    ||    
T  17705467 tg 17705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 27573700 - 27573581
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    |||||||||||||||||||||| ||||||||| | ||| | ||||||| || |||| || |||||| ||||  ||||||| | ||||||| |||||||||    
T  27573700 ccaccatttggtgtattgtacgcagccttaccatgtttat-acacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaact 27573602  T
Q  103 ttaccagttgtgccagggtta 123  Q
    |||||||||| |||| |||||    
T  27573601 ttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 40762287 - 40762349
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccag 63  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| || |||||||||    
T  40762287 tcccaccatttggtgtattgtacgtagccttacccagttttttacacaagaggctgtttccag 40762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 26684673 - 26684786
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttacccta-ttttttacacaagcggt-tgtttccaggacttcaacccgtgaccttgctgtcacattacaac 98  Q
    ||||||||||| || ||||||||| ||||||||| || ||||||||||||| ||| ||||| |||||||| ||||  ||||||| |  |||||| |||||    
T  26684673 tcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgttttcaggacttaaacctttgacctttcaatcacatgacaac 26684772  T
Q  99 aactttaccagttg 112  Q
    ||||||||||||||    
T  26684773 aactttaccagttg 26684786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 29419946 - 29420048
Alignment:
Q  9 tttggtgtattgtacgtagccttac----cctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    |||||||||||||||| ||||||||    ||| ||||||||||||| ||||||||||||||||| ||| ||||||||| | ||||  | |||||||||||    
T  29419946 tttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaacttt 29420045  T
Q  105 acc 107  Q
    |||    
T  29420046 acc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 33795350 - 33795261
Alignment:
Q  18 ttgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||| ||||||||||| |||||||| |||| |||||||||| |||||| ||||||||||||| |  |||| | ||||||||||||||    
T  33795350 ttgtacgcagccttaccctgttttttacccaagaggttgtttccgggacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 99320 - 99421
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    |||||||||||||||||||||| |||||| || | |||||||||  || || |||||| ||||||| ||||||||||||| | ||||| | |||||||||    
T  99320 ccaccatttggtgtattgtacgcagccttgccatgttttttaca--agaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaact 99417  T
Q  103 ttac 106  Q
    ||||    
T  99418 ttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 24860045 - 24860155
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    |||||||||||||||||||| ||||| ||| | ||||| |||| || ||||||||||||| ||| ||||||| ||||| | ||||||| ||||||| |||    
T  24860045 accatttggtgtattgtacgcagcct-accatgttttt-acaccagaggttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaatttt 24860142  T
Q  105 accagttgtgcca 117  Q
    |||||||| ||||    
T  24860143 accagttgcgcca 24860155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 111
Target Start/End: Complemental strand, 44604898 - 44604826
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagtt 111  Q
    |||||||||||| ||||||||||||||||| |||| |||||||| | ||||||| |||||||||||| |||||    
T  44604898 tttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 103
Target Start/End: Original strand, 17380296 - 17380391
Alignment:
Q  7 catttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactt 103  Q
    |||||||||||||| ||  | ||||||||| ||| | ||||||| ||||||||||| ||||| ||||||||||||| | ||||||| ||||||||||    
T  17380296 catttggtgtattgcacacaaccttaccctgtttat-acacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 4516404 - 4516510
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||| ||||||||||||||| ||| || |||| ||||||||||||| || |||||| || |||| ||   |||||||| | ||||| | |||||||    
T  4516404 tcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaa 4516503  T
Q  101 ctttacc 107  Q
    |||||||    
T  4516504 ctttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 19615065 - 19614983
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    ||||| ||||||||| || |||||||| ||||||| ||||| || |||||| ||||||| ||||||||||||| | |||||||    
T  19615065 ttggtatattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttcagtcacat 19614983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 31821396 - 31821491
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaac 98  Q
    ||||| |||||||||||||||||  | |||||||||||||||||||||  ||| |||||| | ||||| ||| ||||||||| | ||||||| |||||    
T  31821396 tcccatcatttggtgtattgtacacaaccttaccctattttttacaca--cggctgtttctacgacttgaactcgtgacctttcagtcacataacaac 31821491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36871574 - 36871509
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggact 67  Q
    |||||||||||||||||||||||| |||||||||||  |||| ||||||| || |||||||||||||    
T  36871574 tcccaccatttggtgtattgtacgcagccttaccct-gttttcacacaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 44521426 - 44521532
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||| |||||||||||||| || | ||||||||| | ||||||||||||| | ||||||||| || || ||| ||||||||| | ||||| | | |||||    
T  44521426 tcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagatttgaacgcgtgacctttcagtcacgtgataacaa 44521525  T
Q  101 ctttacc 107  Q
    |||||||    
T  44521526 ctttacc 44521532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 45235870 - 45235976
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatt-ttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| |||||||  |||||||||||||||||| ||||||| ||| |  |||||| ||||||| ||| ||||| ||| | ||||||| | ||||    
T  45235870 tcccaccattttgtgtattacacgtagccttaccctattattttacagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaaca 45235969  T
Q  100 actttac 106  Q
    |||||||    
T  45235970 actttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 30826116 - 30826052
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||| || |||||||| |||||    
T  30826116 ccaccatttggtgtattgtacgcaaccttaccctat-ttttacacaagaggctgtttccaagactt 30826052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 2003592 - 2003671
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||| ||||||||||| | ||||||||| |||||| || |||| || ||||||||||||||  ||||||||||||    
T  2003592 caccatttgttgtattgtacgcatccttaccctgtttttttacgcaaggggctgtttccaggacttgtacccgtgacctt 2003671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25632591 - 25632544
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacaca 48  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||    
T  25632591 tcccaccatttggtgtattgtacgcagccttatcctgttttttacaca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25641583 - 25641487
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaac 98  Q
    |||||| ||||||||||||||||| | | ||||||| ||||  ||||||   | |||||||||||||| ||||||||||||| | ||||||| |||||    
T  25641583 tcccacaatttggtgtattgtacgcaactttaccctgttttc-acacaaaatgctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 30864474 - 30864536
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    |||||||||| ||||||||| | |||||||||| |||||||||||| || |||||||| |||||    
T  30864474 accatttggtatattgtacgcacccttacccta-tttttacacaagaggctgtttccatgactt 30864536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 14544131 - 14544022
Alignment:
Q  16 tattgtacgtagccttaccctattttt-tacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtg 114  Q
    ||||| ||| || |||||||| ||||| |||||||| || ||||||||| || |  ||| || ||||| | ||||||| ||||||||||||||| ||| |    
T  14544131 tattgcacgcagtcttaccctgtttttctacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaactttaccaattgcg 14544032  T
Q  115 ccagggttac 124  Q
    ||| ||||||    
T  14544031 ccaaggttac 14544022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Original strand, 15296468 - 15296533
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaaccc 74  Q
    |||||| ||||||||| ||||||||||| | ||||||||||  || ||||||| |||||| |||||    
T  15296468 tttggtatattgtacgcagccttaccctgtattttacacaacaggctgtttccgggacttgaaccc 15296533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 39499283 - 39499324
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttt 42  Q
    |||||||||||| ||||||||||| ||| |||||||||||||    
T  39499283 tcccaccatttgatgtattgtacgcagctttaccctattttt 39499324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 31158522 - 31158598
Alignment:
Q  29 cttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttta 105  Q
    |||||||| |||||||| |||| || |||||  | ||||| ||||| ||||||| | ||||||| ||||||||||||    
T  31158522 cttaccctgttttttacgcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 5648340 - 5648218
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  5648340 tcccaccatttggtgtattgtacgcagccttaccctgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaa 5648242  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  5648241 ctttaccagttgcgccaaggttac 5648218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 20225064 - 20224943
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||||||||||||||| ||||| ||||||| | ||||||| |||||||    
T  20225064 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 20224967  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  20224966 ctttaccagttgcgccaaggttac 20224943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 48598878 - 48598999
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  48598878 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 48598975  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  48598976 ctttaccagttgcgccaaggttac 48598999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 6430679 - 6430801
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || |||||||| ||||| ||||||||||||| | ||||||| |||||||    
T  6430679 tcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaa 6430777  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  6430778 ctttaccagttgcgccaaggttac 6430801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 21647037 - 21646924
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||| ||||||||| ||||||||||||||||||||||||| || |||||||||||||| |||| |||||||| | ||||||| ||||||||||||||||    
T  21647037 ttggtatattgtacgcagccttaccctattttttacacaagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttaccag 21646938  T
Q  110 ttgtgccagggtta 123  Q
    ||| |||| |||||    
T  21646937 ttgcgccaaggtta 21646924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 16408665 - 16408777
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| || |||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  16408665 ttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccag 16408764  T
Q  110 ttgtgccagggtt 122  Q
    ||| |||| ||||    
T  16408765 ttgcgccaaggtt 16408777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 47528583 - 47528692
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| |||| |||||||| | ||||||| |||||||    
T  47528583 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaa 47528680  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  47528681 ctttaccagttg 47528692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 5306717 - 5306839
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | |||||||||  |||| ||||||| || |||||||||||||| ||||||||||||| | ||||||| ||| |||    
T  5306717 tcccaccatttggtgtattgtacgcaaccttaccctgatttt-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaa 5306815  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  5306816 ctttaccagttgcgccaaggttac 5306839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19027930 - 19027823
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||| ||||||||||||||| ||||||||||| |||||||||||||  |||||||||||||||| ||||||||||||| | ||||| | |||||||    
T  19027930 tcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 19027831  T
Q  101 ctttacca 108  Q
    || |||||    
T  19027830 ctctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40915910 - 40915802
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||| | ||||| ||||||| || |||||||||||||| |||||||||||||   ||||||| |||||||    
T  40915910 tcccaccatttggtgtattgtacgcagccttaccttgttttt-acacaagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaa 40915812  T
Q  101 ctttaccagt 110  Q
    ||||||||||    
T  40915811 ctttaccagt 40915802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 124
Target Start/End: Complemental strand, 30639458 - 30639339
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactt 103  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||||| |  |||||||||||||| |||| |||||||| | ||||||  ||||||||||    
T  30639458 caccatttggtgtattgtacgcagccttaccctgttttt-acacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactt 30639360  T
Q  104 taccagttgtgccagggttac 124  Q
    ||||||||| |||| ||||||    
T  30639359 taccagttgcgccaaggttac 30639339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 37494933 - 37494822
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||| ||||||| | | ||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||| | ||| |||  ||||||    
T  37494933 tcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaa 37494834  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  37494833 ctttaccagttg 37494822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 41018847 - 41018945
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||| | ||||| | |||||||    
T  41018847 tcccactatttggtgtattgtacgtagccttaccctaatttt-acacaagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 10660477 - 10660363
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||| | |||| |||||||||||||||| ||| ||||||||||||||||| |||  || ||||| | ||||||| ||||||||||||||||    
T  10660477 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccag 10660378  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  10660377 ttgcgccaaggttac 10660363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 10874622 - 10874508
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||| | |||| |||||||||||||||| ||| ||||||||||||||||| |||  || ||||| | ||||||| ||||||||||||||||    
T  10874622 ttggtgtattgtatgcagccataccctattttttacataagaggttgtttccaggacttgaacatgtaacctttcagtcacatgacaacaactttaccag 10874523  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  10874522 ttgcgccaaggttac 10874508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 16911635 - 16911521
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| |||||||||||  ||| |||||||| || |||||| ||||||| |||||||||||||   ||||||| ||||||||||||||||    
T  16911635 ttggtgtattgtacgcagccttaccctgatttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttaccag 16911536  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  16911535 ttgcgccaaggttac 16911521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 17043447 - 17043549
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||||||| || |||||||||||||| |||| |||||||| | ||||| | |||||||    
T  17043447 tcccaccatttggtgtattgtacgcagccttaccctgtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaacaa 17043546  T
Q  101 ctt 103  Q
    |||    
T  17043547 ctt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 47444039 - 47443958
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| |||| || |||||||||||||| |||||||||||||    
T  47444039 tcccaccatttggtgtattgtacgcagccttaccctgttttttacgcaagaggctgtttccaggacttgaacccgtgacctt 47443958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14590920 - 14590796
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||| ||||||||| | ||||||||||| |||||| | ||||| || |||||| ||||||| || |||||||||| | ||||||| ||||||    
T  14590920 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 14590821  T
Q  100 actttaccagttgtgccagggttac 124  Q
    ||||||||||||| |||| ||||||    
T  14590820 actttaccagttgcgccaaggttac 14590796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14983916 - 14983793
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||| |||||||||| | | ||||||||||||||||||||||| || |||||| | ||||| || |||||||||| |  ||| || |||||||    
T  14983916 tcccaccatttagtgtattgtaggcaaccttaccctattttttacacaagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaa 14983817  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||||||||||| ||||| ||||||    
T  14983816 ctttaccagttctgccaaggttac 14983793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35567252 - 35567146
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||| ||||||  ||||||||||| ||||||||||||| || |||||||| ||||| ||||| ||||||| | || |||| |||||||    
T  35567252 tcccaccatttggtgtgttgtacacagccttaccctgttttttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaa 35567153  T
Q  101 ctttacc 107  Q
    |||||||    
T  35567152 ctttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 11054206 - 11054315
Alignment:
Q  6 ccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttta 105  Q
    ||||||||||||||||||| || |||||||| ||||  ||||||| |  ||||| |||||||| ||||||||||||| | ||||||| ||||||||||||    
T  11054206 ccatttggtgtattgtacgcagtcttaccctgtttt--acacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaacttta 11054303  T
Q  106 ccagttgtgcca 117  Q
    ||||||| ||||    
T  11054304 ccagttgcgcca 11054315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 25463204 - 25463108
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaa 97  Q
    |||||||||||||||| ||||||| | |||| |||  ||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| ||||    
T  25463204 tcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 487187 - 487294
Alignment:
Q  1 tcccaccatttg-gtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||  |||||||||||| ||| ||||| | |||| |||||||| ||||||||||| ||||| ||||||||||||| | ||||||| ||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaaca 487286  T
Q  100 actttacc 107  Q
    ||||||||    
T  487287 actttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 7385529 - 7385628
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||| ||  | ||||||||||||||||||||| | || |||||||||| ||| ||||||||||||| | ||||||| |||||||    
T  7385529 tcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9987887 - 9987954
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||| |||||||||||||||||    
T  9987887 tcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgtttccaggactt 9987954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 9832366 - 9832468
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||| || ||||| |||||||| ||||||||||||| | |||| || |||||||    
T  9832366 tcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaa 9832463  T
Q  101 cttta 105  Q
     ||||    
T  9832464 tttta 9832468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 23501860 - 23501752
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| | ||||||||| ||||||||||||| || |||      ||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  23501860 ttggtgtattgtacgcaaccttaccctgttttttacacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaactttaccag 23501767  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  23501766 ttgcgccaaggttac 23501752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 30352681 - 30352767
Alignment:
Q  38 ttttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    ||||||||||||| || |||||||||||||  ||||||||||||| | ||||| | ||||||||||||||||||| |||| ||||||    
T  30352681 ttttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggttac 30352767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 107
Target Start/End: Complemental strand, 54730323 - 54730225
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||| |||| ||||||| |||||||||| ||||||| || |||||| ||||||| |||||||||||||   ||||||| ||||||||||||||    
T  54730323 ttggtgtattatacgcagccttatcctatttttttacacaagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttacc 54730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 54967102 - 54966997
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||| ||||||| | | ||||||||| ||||||||||||| |||| ||||||| |||| |||  |||||||| | ||||||| |||||||    
T  54967102 tcccaccatttggtatattgta-gcaaccttaccctgttttttacacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaa 54967004  T
Q  101 ctttacc 107  Q
    |||||||    
T  54967003 ctttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 8473675 - 8473789
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||| | ||||||||||| ||    ||||||| || |||||||||||||| ||||||  ||||| | |||| || |||||||    
T  8473675 tcccaccatttggtgtattgtatgcagccttaccctgttaa--acacaagaggctgtttccaggacttgaacccgcaaccttccggtcatatgacaacaa 8473772  T
Q  101 ctttaccagttgtgcca 117  Q
    |||||||||||| ||||    
T  8473773 ctttaccagttgcgcca 8473789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 13256463 - 13256561
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| ||     |||||||||| ||||  ||||||| | ||||||| ||||||||||||||||    
T  13256463 ttggtgtattgtacgcagccttaccctgttttttacacaagagg----ctccaggacttgaacctatgaccttccagtcacatgacaacaactttaccag 13256558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 17315389 - 17315474
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    |||||||||||| ||||||||| |||| || ||||||||||||| | ||||||| |||||||||||||| |||| |||| ||||||    
T  17315389 tttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttac 17315474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 44363193 - 44363294
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||  ||||||| |||| |||||| ||||||||||| | || ||||| |||||||| ||| ||||||||| | ||||||| |||||||||||||||    
T  44363193 tttggtgcgttgtacgcagccctaccctgttttttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaactttacca 44363292  T
Q  109 gt 110  Q
    ||    
T  44363293 gt 44363294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 25343261 - 25343162
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| ||||||||||| ||||||||||||| |  | ||||||| |||| |||| |||||||  | ||||| | |||||||||||||||    
T  25343261 tttggtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttacca 25343162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29207951 - 29208039
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcaca 91  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||| ||   |||||||||||| ||||||||||||| | ||||||    
T  29207951 tcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 39077852 - 39077948
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    ||||||||||| ||||||||| | ||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| |  |||||| |||||||||    
T  39077852 caccatttggtatattgtacgcaaccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20639711 - 20639777
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggac 66  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||    
T  20639711 tcccaccattttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 25629131 - 25629069
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccag 63  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||| |  |||||||||    
T  25629131 tcccaccatttggtgtattgtacacagccttaccctattttttacacaagagactgtttccag 25629069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 42164227 - 42164307
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||||| |||| |||||||| ||||||||||| ||||| ||||||||||||| | ||||||| ||||||| ||||||    
T  42164227 agccttaccctgtttt-tacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 43035305 - 43035224
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||| | ||| ||||||||| |||||||||| |||||| ||||||||||||| | ||||| | ||||||||||||||    
T  43035305 agccttaccgtgtttcttacacaagaggttgtttcctggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 54175146 - 54175043
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttg-tttccaggacttcaacccgtgaccttgctgtcacattacaac 98  Q
    ||||||||||| ||||||||||||| |||||||||||  |||||||||||| || || |||||||||||| || ||||||| || | ||||||| |||||    
T  54175146 tcccaccattttggtgtattgtacgcagccttaccct-gtttttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaac 54175048  T
Q  99 aactt 103  Q
    |||||    
T  54175047 aactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 7038126 - 7038044
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    |||||||||||||||| || ||||||||||||||||||||||  | ||||| |||||||| |||| |||||||| | |||||||    
T  7038126 tttggtgtattgtacgaagtcttaccctattttttacacaagaagctgttt-caggacttgaacctgtgacctttcagtcacat 7038044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 44357294 - 44357195
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    ||||||||||||||||| | ||||| |||||| ||||||||  ||||||||| ||||||| ||| | ||||||| | || |||| |||| ||||||||||    
T  44357294 tttggtgtattgtacgtcgtcttactctatttattacacaaaaggttgtttctaggacttgaactcatgacctttcagttacataacaataactttacca 44357195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 107
Target Start/End: Original strand, 47441587 - 47441689
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    |||||||||||||||||||  |||||||||||  |||||||| ||| |  ||||||  |||||| |||| |||||||| | ||||| | |||||||||||    
T  47441587 accatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaacttt 47441686  T
Q  105 acc 107  Q
    |||    
T  47441687 acc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 30496375 - 30496489
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||| ||||||||||||||||| | ||||||||||   | |||||||||| || |||||||| ||||| ||| ||||||||| | ||||| | |||||||    
T  30496375 tccccccatttggtgtattgtatgcagccttacccg--tgtttacacaagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaa 30496472  T
Q  101 ctttaccagttgtgcca 117  Q
    ||||  |||||| ||||    
T  30496473 cttttacagttgcgcca 30496489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 30690229 - 30690340
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccct-------attttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatt 93  Q
    |||||||| ||||||||||||| | |||||||||||       |||||||||||||| || | |||||||||||| ||||||||||||| | ||||| |     
T  30690229 tcccaccaattggtgtattgtatgcagccttaccctgttttttattttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttg 30690328  T
Q  94 acaacaacttta 105  Q
    ||||| ||||||    
T  30690329 acaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 51865092 - 51865149
Alignment:
Q  2 cccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgttt 59  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||||| || |||||    
T  51865092 cccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 32478844 - 32478942
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||      ||||||||||| ||||| |||| || ||||||||||||||||| |||| |||||||  | ||||||| |||||||    
T  32478844 tcccaccatttggtgtattc-----agccttaccctgttttt-acactagaggttgtttccaggacttgaacctgtgacctctcggtcacatgacaacaa 32478937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 30581518 - 30581601
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctatttt-ttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||| ||||||||||||  | ||||||||| |||| ||||||||| ||||||||||| ||||| ||||| |||||||    
T  30581518 tcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaacccttgacctt 30581601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 39029113 - 39029220
Alignment:
Q  1 tcccaccatttg-gtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||  |||||||||||  ||||||||||| ||||||||||||| || |||||||| | ||| ||||  |||||||   ||||||  ||||||    
T  39029113 tcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaaca 39029212  T
Q  100 actttacc 107  Q
    ||||||||    
T  39029213 actttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 49938681 - 49938746
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    |||||||||||| || |||||||||||||| |||| |||||||| | ||||| | |||||||||||    
T  49938681 tttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 51420646 - 51420589
Alignment:
Q  11 tggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    |||||||||||||  ||||||||||| |||| |||||||| ||||||||||| |||||    
T  51420646 tggtgtattgtacccagccttaccctgttttctacacaagaggttgtttccatgactt 51420589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 7909334 - 7909397
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagga 65  Q
    |||||||||||||||||||||||| | |||||||||  |||||||||||| |  |||||||||||    
T  7909334 tcccaccatttggtgtattgtacgcaaccttaccct-gtttttacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Original strand, 10277813 - 10277886
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgac 79  Q
    ||||||||||||||||||||| ||||||| ||||  ||||| ||||| || |||||| |||| || ||||||||||    
T  10277813 caccatttggtgtattgtacgcagccttatccta--ttttatacaagaggctgtttcaaggatttgaacccgtgac 10277886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 105
Target Start/End: Original strand, 23580269 - 23580365
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttta 105  Q
    ||||||||||  |||| || ||| |||| ||||||||||||| || | |||| || |||| ||||||||||||| | ||||| | ||||||||||||    
T  23580269 tttggtgtatcctacgcagtcttcccctgttttttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 7227785 - 7227710
Alignment:
Q  30 ttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttta 105  Q
    ||||||||||||| |||||||||||||||||| | | || ||| | |||| || | ||||||| ||||||||||||    
T  7227785 ttaccctatttttaacacaagcggttgtttcctgaatttgaactcatgacttttcagtcacatgacaacaacttta 7227710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 12711502 - 12711561
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttacccta-ttttttacacaagcggttgttt 59  Q
    |||| ||||||||||||||||||| || ||||||||| |||||||||||||  |||||||    
T  12711502 tcccgccatttggtgtattgtacgcagtcttaccctatttttttacacaagatgttgttt 12711561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 49796879 - 49796818
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccag 63  Q
    |||||||||||||||||||||||| ||||||||| |  |||| ||||||| || |||||||||    
T  49796879 tcccaccatttggtgtattgtacgcagccttaccat-gttttaacacaagaggctgtttccag 49796818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 55766521 - 55766630
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaaccc-gtgaccttgctgtcacattacaacaac 101  Q
    ||||||||  |||||||||||| ||||||||||| |||   |||||||    ||||||||  |||| ||||| |||||||| | ||||||| ||||||||    
T  55766521 ccaccattcagtgtattgtacgcagccttaccctgtttac-acacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaac 55766619  T
Q  102 tttaccagttg 112  Q
    |||||||||||    
T  55766620 tttaccagttg 55766630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 5313101 - 5313170
Alignment:
Q  55 tgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    ||||| ||||| || ||||||||||||| |  |||||| ||||||||||||||||||  |||| ||||||    
T  5313101 tgttttcaggaattgaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttac 5313170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 17079704 - 17079777
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaaccc 74  Q
    ||||||||||| | |||||||| | ||||||||||| |||| ||||||||   ||||||||| ||||| |||||    
T  17079704 tcccaccatttagcgtattgtatgcagccttaccctgttttatacacaagatattgtttccaagacttgaaccc 17079777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 54640429 - 54640498
Alignment:
Q  38 ttttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||||||| || |||||||| ||||| ||||||||||||| | | ||| | ||||||| ||||||    
T  54640429 ttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc 54640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 112
Target Start/End: Complemental strand, 20405104 - 20405064
Alignment:
Q  72 cccgtgaccttgctgtcacattacaacaactttaccagttg 112  Q
    ||||||||||| | ||||||| |||||||||||||||||||    
T  20405104 cccgtgaccttccagtcacatgacaacaactttaccagttg 20405064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 21489170 - 21489102
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    ||||||||||| |||| |||||||| || ||||| || |||||||| |||| || ||||||||||||||    
T  21489170 tcccaccattttggtgcattgtacgcagtcttactctgttttttacgcaagaggctgtttccaggactt 21489102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 4e-35; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 46991909 - 46991798
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||| ||||||||||||  ||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| |||||||    
T  46991909 tcccaccattcggtgtattgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaa 46991810  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  46991809 ctttaccagttg 46991798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 23768373 - 23768484
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| || |||||||| ||||| |||| |||||||| | ||||||| |||||||    
T  23768373 tcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaacaa 23768472  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  23768473 ctttaccagttg 23768484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 32632610 - 32632732
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||| || |||||||||||||| ||||||||||||| | |||| || |||||||    
T  32632610 tcccaccatttggtgtattgtacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaa 32632708  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  32632709 ctttaccagttgcgccaaggttac 32632732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 41319859 - 41319982
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||| |||||||||||||||||| ||||||||||| ||||||||||||| |  |||||||||||||| |||| |||||||| | ||||||| |||||||    
T  41319859 tcccatcatttggtgtattgtacgcagccttaccctgttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaa 41319958  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||||| || ||||||    
T  41319959 ctttaccagttgtgtcaaggttac 41319982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 46248006 - 46248129
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || |||||||| ||||||||||||| || |||||||| ||||| |||||||||| || | ||||||| |||||||    
T  46248006 tcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 46248105  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  46248106 ctttaccagttgagccaaggttac 46248129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6925205 - 6925096
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||| |||||||||| || ||||||||||||||||||||||||| || | |||||||||||| ||||||||||||| | ||||||| |||||||    
T  6925205 tcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaa 6925106  T
Q  101 ctttaccagt 110  Q
    ||||||||||    
T  6925105 ctttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 30395790 - 30395903
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || |||||||||||||| |||||||||||||   ||||||| ||||||||||||||||    
T  30395790 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttaccag 30395889  T
Q  110 ttgtgccagggtta 123  Q
    ||| |||| |||||    
T  30395890 ttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 34725151 - 34725272
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||| |||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  34725151 tcccaccatttagtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 34725248  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  34725249 ctttaccagttgcgccaaggttac 34725272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 18944739 - 18944625
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || |||||||||| ||| |||| |||||||| | ||||||| ||||||||||||||||    
T  18944739 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttaccag 18944640  T
Q  110 ttgtgccagggttac 124  Q
    ||| |||| ||||||    
T  18944639 ttgcgccaaggttac 18944625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 14617143 - 14617020
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | ||||||| | || |||||||||| || |||||||||||||| ||| ||||||||| | ||||||| |||||||    
T  14617143 tcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaa 14617044  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||||||| |||| |||| ||||||    
T  14617043 ctttaccggttgcgccaaggttac 14617020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 18724605 - 18724704
Alignment:
Q  8 atttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||||||||||  ||||||||||| ||||||||||||| || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||    
T  18724605 atttggtgtattgtacacagccttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 20004154 - 20004256
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||| | |||||||||| || || |||||||||||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  20004154 ttggtgtattgtacgcagccttaccttgttttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccag 20004253  T
Q  110 ttg 112  Q
    |||    
T  20004254 ttg 20004256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 3 - 124
Target Start/End: Original strand, 38478337 - 38478456
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    |||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||| ||||||| ||||||||||||| | ||||||| ||||||| |    
T  38478337 ccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagt 38478434  T
Q  103 ttaccagttgtgccagggttac 124  Q
    |||| ||||| |||| ||||||    
T  38478435 ttactagttgcgccaaggttac 38478456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 25468320 - 25468421
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    |||||||||||||||||||| | |||||||||  |||||||||||| ||||||||||||||||| ||||| ||||||| |  |||||| |||||||||||    
T  25468320 accatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaacaacttt 25468419  T
Q  105 ac 106  Q
    ||    
T  25468420 ac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 44485166 - 44485267
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    |||||||||||||||||||| ||||||||| | | ||||||||||| ||||||||||||||||  ||||||||||||| |  |||||| |||||||||||    
T  44485166 accatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgtttccaggactataacccgtgacctttcaatcacatgacaacaacttt 44485265  T
Q  105 ac 106  Q
    ||    
T  44485266 ac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 47214614 - 47214500
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | ||||||||| ||||  | ||||| |  |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  47214614 tcccaccatttggtgtattgtacgcaaccttaccctgtttt--aaacaagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 47214517  T
Q  101 ctttaccagttgtgcca 117  Q
    |||||||||||| ||||    
T  47214516 ctttaccagttgcgcca 47214500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2435839 - 2435946
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||||||||| || |||||||||||||| ||||| | || |||||||||||||| ||||||||||||| | ||||| | ||||||    
T  2435839 tcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaaca 2435938  T
Q  100 actttacc 107  Q
    ||||||||    
T  2435939 actttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 4430080 - 4430187
Alignment:
Q  2 cccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaac 101  Q
    ||||||||||||||||||||||| || |||||||| |||||||||||||    ||||| || ||||| ||||||||||||| | ||||||| ||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagatactgttttcaagacttaaacccgtgaccttccagtcacatgacaacaac 4430179  T
Q  102 tttaccag 109  Q
    ||||||||    
T  4430180 tttaccag 4430187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 8197144 - 8197037
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||| ||   || ||||||||| ||||||||||||| | ||||||| ||||||||||     
T  8197144 accatttggtgtactgtacgtagccttaccatgttttttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaacttg 8197045  T
Q  105 accagttg 112  Q
    ||||||||    
T  8197044 accagttg 8197037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 27201744 - 27201645
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| ||||||||||| ||| | ||||||| || |||||||||||||| ||||| ||||||| | ||||||| |||||||||||||||    
T  27201744 tttggtgtattgtacgcagccttaccctgtttctgacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 45812590 - 45812711
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||| | ||||||||||| ||||  ||||||| |  ||||| |||||||| |||| |||||||| | ||||||| |||||||    
T  45812590 tcccaccatttggtgtattgtatgcagccttaccctctttt--acacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaacaa 45812687  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||||| |||||| |||| ||||||    
T  45812688 ctttatcagttgcgccaaggttac 45812711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 124
Target Start/End: Complemental strand, 10668321 - 10668202
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctg-----tcacattacaacaacttt 104  Q
    ||||||||||||||| | ||||||| | ||||||||||||| || |||||||||||||| ||||||||||||| | |     |||||| |||||||||||    
T  10668321 ttggtgtattgtacgcaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaacttt 10668222  T
Q  105 accagttgtgccagggttac 124  Q
    |||||||| |||| ||||||    
T  10668221 accagttgcgccaaggttac 10668202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 22327196 - 22327101
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    ||||||| || ||||  ||||||||||| ||||||||||||| ||||||||||||||||| |||||| |||||| | ||||||| |||||||||||    
T  22327196 tttggtgcatcgtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 22930122 - 22930243
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||||||||||||| |  | ||||||||| |||| |||||||  || |||||||||||||| ||||| ||||||| | ||||||| |||||||    
T  22930122 tcccaccatttggtgtattgt-cacaaccttaccctgtttt-tacacaaaaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaa 22930219  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  22930220 ctttaccagttgcgccaaggttac 22930243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 11596617 - 11596512
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||||||||||| |||| ||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||||| || | ||||||| ||| | |    
T  11596617 tcccaccatttggtgtattatacgcagccttaccctgttttt-acacaagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagcca 11596519  T
Q  101 ctttacc 107  Q
    |||||||    
T  11596518 ctttacc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 17470407 - 17470505
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||||||| ||||||||||| ||||||||||||| || |||||| ||||||| ||||| ||||| | | ||||| | ||||||||||||||    
T  17470407 tttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 20036324 - 20036218
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattt-tttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaac 101  Q
    |||||||||||||||||| ||| |  |||||||| | | |||||||||| | ||||||||||||||| ||||||||||||| | ||||||| ||||||||    
T  20036324 ccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 20036225  T
Q  102 tttacca 108  Q
    |||||||    
T  20036224 tttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 35117829 - 35117927
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||||||  ||||||||||| | ||||||||||| || | |||||||||||| ||||||||||||| | ||||| | ||||||||||||||    
T  35117829 tttggtgtattgtacacagccttaccctgtattttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 19932816 - 19932921
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| ||||||||||| ||||||||||||  |||||| ||||  |||| ||||| ||||||| | ||||||| |||||||||||||||    
T  19932816 tttggtgtattgtacgcagccttaccctgttttttacacaa-aggttgtatcca--acttgaacccatgacctttcagtcacatgacaacaactttacca 19932912  T
Q  109 gttgtgcca 117  Q
    |||| ||||    
T  19932913 gttgcgcca 19932921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 12126890 - 12127010
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||| ||||||||||||||||| ||||||||||| ||||  |||||||  | ||||||||| |||| ||||||||||||| |  | |||| |||||||    
T  12126890 tcccacaatttggtgtattgtacgcagccttaccctgtttt--acacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaa 12126987  T
Q  101 ctttaccagttgtgccagggtta 123  Q
    |||||| ||||| |||| |||||    
T  12126988 ctttacgagttgcgccaaggtta 12127010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 15511210 - 15511311
Alignment:
Q  9 tttggtgtattgta--cgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttac 106  Q
    ||||||||||||||  || ||||||||||| ||||||||||||| ||  ||||||||||||||||   |||||||| | | |||||||||||||||||||    
T  15511210 tttggtgtattgtatccgcagccttaccctgttttttacacaagaggcggtttccaggacttcaatatgtgacctttcagccacattacaacaactttac 15511309  T
Q  107 ca 108  Q
    ||    
T  15511310 ca 15511311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 33223089 - 33222973
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||||||||| | |||| |||| ||||| ||||||| || |||||||| ||||| || |||||||||| | ||||||| ||||||    
T  33223089 tcccaccattttggtgtattgtacgcaacctttccctgttttt-acacaagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaaca 33222991  T
Q  100 actttaccagttgtgcca 117  Q
    |||||||| |||| ||||    
T  33222990 actttaccggttgcgcca 33222973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6983864 - 6983969
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| |  |||||||| ||||||| || ||  | |||||||||||||| |||| |||||||| | ||||| | |||||||    
T  6983864 tcccaccatttggtgtattgtacgcatacttaccctgttttttatacgag--gctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaa 6983961  T
Q  101 ctttacca 108  Q
    ||||||||    
T  6983962 ctttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 19414542 - 19414437
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||| ||| ||||  ||| ||| || | |||| ||||||| ||||||||||||| | |||| || |||||||    
T  19414542 tcccaccatttggtgtattgtacgcagccttaacctgtttt--acataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaa 19414445  T
Q  101 ctttacca 108  Q
    ||||||||    
T  19414444 ctttacca 19414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35253240 - 35253329
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacat 92  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||| || |||||| ||||||| ||||||||| ||| | |||||||    
T  35253240 tcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 2435981 - 2436052
Alignment:
Q  36 tattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||||||| | ||||||||||||||||| ||||||||||||| | ||||| | ||||||||||||||    
T  2435981 tattttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 104
Target Start/End: Complemental strand, 9939558 - 9939463
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaacttt 104  Q
    |||||||||||| ||| | ||||||| | ||| ||| ||||| ||||||||||||||||| ||| ||||||||| | ||||||| |||||||||||    
T  9939558 tttggtgtattgcacgcaaccttaccatgtttcttaaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 27474385 - 27474275
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||||||||  |||||||||||| ||| || |||| ||||| ||||||| |  |||||||| ||||| |||| |||||||| | ||||||| |||||||    
T  27474385 tcccaccattcagtgtattgtacgcagctttgccctgttttt-acacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaa 27474287  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  27474286 ctttaccagttg 27474275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 45402201 - 45402077
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagc-ctt--accctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaa 97  Q
    |||||||||||||||||||||||| ||  |||  ||||| ||||| ||||||| || |||||||||||||| ||||||| ||||| |  |||||| ||||    
T  45402201 tcccaccatttggtgtattgtacgcagaacttgaaccctgttttt-acacaagaggctgtttccaggacttgaacccgttacctt-ccatcacatgacaa 45402104  T
Q  98 caactttaccagttgtgccagggttac 124  Q
    ||||||||||||||| |||| ||||||    
T  45402103 caactttaccagttgcgccaaggttac 45402077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 25290244 - 25290140
Alignment:
Q  27 gccttaccctattttttacacaagcggttgt--ttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    |||||||||| ||||||||||||| || |||  ||||| ||||| ||| ||||||||| | ||||||| |||||||||||||| |||| |||| ||||||    
T  25290244 gccttaccctgttttttacacaagaggctgtgtttccaagacttgaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggttac 25290145  T
Q  125 tcttc 129  Q
     ||||    
T  25290144 ccttc 25290140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27136704 - 27136820
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    ||||||||||| ||||||||||||| | ||||||| | ||||||||||||| ||||||| |||| |||| ||| |||| |||| |  |||| | ||||||    
T  27136704 tcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgttcccagaacttgaactcgtgtccttccaatcacgtgacaaca 27136803  T
Q  100 actttaccagttgtgcca 117  Q
    |||||||| |||||||||    
T  27136804 actttacc-gttgtgcca 27136820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 35005220 - 35005147
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    |||||||||||||| | ||||||||||| ||||||||||||| || ||||| || ||||| |||||||||||||    
T  35005220 tttggtgtattgtatgcagccttaccctgttttttacacaagaggctgttttcaagacttgaacccgtgacctt 35005147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 50760288 - 50760385
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||| |||| ||||||||||  |||| |||||||| || ||||| |||||||| ||||||||||||  | ||||||| ||||| ||||||||    
T  50760288 ttggtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 24564445 - 24564382
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    ||||||||||| |||||||| | ||||||||| ||||||||||||| ||||||||||| |||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagactt 24564382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 18742020 - 18742137
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttcc-aggacttcaacccgtgaccttgctgtcacattacaacaactttac 106  Q
    |||||||||||||||| ||||||||||| |||||| | ||||  |  ||||||| | || || ||||| ||||||| | ||||||| |||||||||||||    
T  18742020 tttggtgtattgtacgcagccttaccctgtttttttatacaaaagactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaactttac 18742119  T
Q  107 cagttgtgccagggttac 124  Q
    |||||| |||| ||||||    
T  18742120 cagttgcgccaaggttac 18742137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 34714674 - 34714605
Alignment:
Q  55 tgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    |||||||| ||||| ||||||||||||| |  |||||| ||||||||||||||||||| |||| ||||||    
T  34714674 tgtttccatgacttgaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttac 34714605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4349743 - 4349699
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttac 45  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||    
T  4349743 tcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 31272429 - 31272508
Alignment:
Q  2 cccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||| |||  |||||| ||||||||| | |||| |||||||| ||||||||||||||||| |||| ||||||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatgtttt-tacacaagaggttgtttccaggacttgaacctgtgacctt 31272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 31382267 - 31382330
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagga 65  Q
    |||||||||||||||||||||||| ||||||| |||  |||||||||||| || |||||||||||    
T  31382267 tcccaccatttggtgtattgtacgcagccttatcct-gtttttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 18335341 - 18335464
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||| |||||| ||||||||||| | | |||||||| |||||| ||||| |  |||||||||||||| |||  |||||||| | | ||||| |||| ||    
T  18335341 tcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccaggactttaacttgtgacctttcagacacatgacaaaaa 18335440  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||||| || ||| |||| ||||||    
T  18335441 ctttatcacttgcgccaaggttac 18335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 50812037 - 50811938
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||||||| | ||||||||| |||||| |||||||  | |||||||||||| | |  |||||||||| | ||||| | ||||||||||||||    
T  50812037 tttggtgtattgtacgcaaccttaccctgtttttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 34679274 - 34679336
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagga 65  Q
    |||||||||| ||||| ||||| || |||||||| ||||||||||||| ||||||||| ||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttctagga 34679336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 35019335 - 35019229
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||| ||||||||||||| | |||||||  ||  |||||| ||||| |||||||| |||||||| || | |||||||| | ||||  | |||||||    
T  35019335 tcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgtttacaggacttgaatctgtgacctttcagtcatgtgacaacaa 35019236  T
Q  101 ctttacc 107  Q
    |||||||    
T  35019235 ctttacc 35019229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 40424786 - 40424724
Alignment:
Q  62 aggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    ||||||| |||||||| |||| | ||||||| ||||||||||||||||||| |||| ||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggttac 40424724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 45264452 - 45264534
Alignment:
Q  1 tcccaccattt-ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||| ||||||||| ||  |||||||| || |||||| |||||| ||||||||||||||||| |||  ||||||||    
T  45264452 tcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtttccaggacttgaacatgtgacctt 45264534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 19701667 - 19701570
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttac 106  Q
    |||||||||||||||  | |||||||   ||||||||||||| || ||||| || ||||| |||||||||| || | ||||||  |||||||||||||    
T  19701667 tttggtgtattgtacccatccttaccaagttttttacacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaactttac 19701570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21910702 - 21910743
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttt 42  Q
    |||||||||||||||||||||||| | |||||||||||||||    
T  21910702 tcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10378788 - 10378828
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  10378788 tcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 34149016 - 34149076
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagg 64  Q
    ||||||||||| | ||||||| | |||||||||||||| |||||||| || ||||||||||    
T  34149016 caccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgtttccagg 34149076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 39215027 - 39215079
Alignment:
Q  16 tattgtacgtagccttaccctattttttacacaagcggttgtttccaggactt 68  Q
    ||||||||| ||||||||||  ||||||||||||| |||||||||||| ||||    
T  39215027 tattgtacgcagccttacccagttttttacacaagaggttgtttccagtactt 39215079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 19656167 - 19656220
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttcca 62  Q
    ||||||||||||||| |||| ||||| | ||||||||||||| || ||||||||    
T  19656167 tttggtgtattgtacatagcgttaccatgttttttacacaagaggctgtttcca 19656220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 21723784 - 21723747
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttt 42  Q
    |||||||||||||||||||  |||||||||||||||||    
T  21723784 accatttggtgtattgtactcagccttaccctattttt 21723747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 22324989 - 22324925
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaaccc 74  Q
    |||||||||||||| | |||||||||||  |||||||||||| || |||||||| ||||| |||||    
T  22324989 tttggtgtattgtatgcagccttaccct-gtttttacacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 23371228 - 23371148
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||| |||||||||||||||||  | |||| |||  |||||||| |||| || |||||| ||||||| |||||||||||||    
T  23371228 tcccagcatttggtgtattgtacacaaccttgcccg-ttttttacccaagtggctgtttctaggacttgaacccgtgacctt 23371148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 25554817 - 25554882
Alignment:
Q  43 tacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||| ||||||||||||||||| ||| |||| ||||   ||||| | |||||||||||||||    
T  25554817 tacacaagaggttgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttacca 25554882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 20999904 - 20999952
Alignment:
Q  2 cccaccatttggtgtattgtacgtagccttaccctattttttacacaag 50  Q
    |||| |||||||||||||||||| |||||| || | |||||||||||||    
T  20999904 cccatcatttggtgtattgtacgcagccttgccttgttttttacacaag 20999952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 23796567 - 23796507
Alignment:
Q  4 caccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagg 64  Q
    ||||||||||||||||||||| | ||||||  |  |||||||||||| || ||||||||||    
T  23796567 caccatttggtgtattgtacgcaaccttacattgatttttacacaagaggctgtttccagg 23796507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 46913 - 46797
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| |||| |||||||||||||   ||||||| |||||||    
T  46913 tcccaccatttggtgtattgtacgcaaccttaccctattttttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaa 46814  T
Q  101 ctttaccagttgtgcca 117  Q
    |||||||| ||| ||||    
T  46813 ctttaccaattgcgcca 46797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 24825 - 24943
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||| || ||||     ||||| ||||| ||||||| | ||||||| |||||||    
T  24825 tcccaccatttggtgtgttgtacgcagccttaccctgttttttacacaagaggctgtt-----gacttgaacccatgacctttcagtcacatgacaacaa 24919  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  24920 ctttaccagttgcgccaaggttac 24943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43739 - 43706
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttacc 34  Q
    |||||||||||||||||||||||| |||||||||    
T  43739 tcccaccatttggtgtattgtacgcagccttacc 43706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 2e-33; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 1347044 - 1346923
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  1347044 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 1346947  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  1346946 ctttaccagttgcgccaaggttac 1346923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 1354810 - 1354931
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||  ||||||| || |||||||||||||| |||| |||||||| | ||||||| |||||||    
T  1354810 tcccaccatttggtgtattgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaa 1354907  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  1354908 ctttaccagttgcgccaaggttac 1354931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 12221979 - 12222086
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| ||||||||||| ||||||||||||| || |||||||| ||||| ||||||||||||| | ||||||| ||||||||||||||||    
T  12221979 ttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttaccag 12222078  T
Q  110 ttgtgcca 117  Q
    ||| ||||    
T  12222079 ttgcgcca 12222086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 15 - 124
Target Start/End: Complemental strand, 8409311 - 8409202
Alignment:
Q  15 gtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtg 114  Q
    |||||||||| ||||||||||| ||||||||||||| ||  ||||||||||||| || |||||||||| | ||||||||||||||||||||||||||| |    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttaccagttgcg 8409212  T
Q  115 ccagggttac 124  Q
    ||| ||||||    
T  8409211 ccaaggttac 8409202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1941937 - 1941826
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||| ||||||||||||| ||||||||||| ||||||||||||| |||||||| || |||||||| ||| |||||| | |||| || |||||||    
T  1941937 tcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttacatgacttcaatccgcgaccttccagtcagatgacaacaa 1941838  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  1941837 ctttaccagttg 1941826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 3815130 - 3815253
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| || | |||| ||||||||||||||  |  |||||||||||||| |||||||||| || | ||||||| |||||||    
T  3815130 tcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaa 3815229  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  3815230 ctttaccagttgcgccaaggttac 3815253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 10 - 124
Target Start/End: Original strand, 29355919 - 29356034
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa-ctttacca 108  Q
    ||||||||||||||| ||||||||||| ||| ||||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||  |||||||    
T  29355919 ttggtgtattgtacgcagccttaccctgtttcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaatttttacca 29356018  T
Q  109 gttgtgccagggttac 124  Q
    ||||||||| ||||||    
T  29356019 gttgtgccaaggttac 29356034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 2166474 - 2166576
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| | ||||| ||| | ||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||| ||    
T  2166474 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactag 2166573  T
Q  110 ttg 112  Q
    |||    
T  2166574 ttg 2166576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 2178107 - 2178209
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| | ||||| ||| | ||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||| ||    
T  2178107 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactag 2178206  T
Q  110 ttg 112  Q
    |||    
T  2178207 ttg 2178209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 3 - 107
Target Start/End: Original strand, 13905034 - 13905138
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    ||||||||||||| |||||| | ||||||||||| ||||||||||||| ||| |||| |||||||| | ||||||||||| | ||||||| |||||||||    
T  13905034 ccaccatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaact 13905133  T
Q  103 ttacc 107  Q
    |||||    
T  13905134 ttacc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 33138915 - 33138838
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtga 78  Q
    ||||||||||||||||||||||||  ||||||| || ||||||| ||||| ||||||||||||||||| |||||||||    
T  33138915 tcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaacccgtga 33138838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 112
Target Start/End: Complemental strand, 14553585 - 14553483
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    ||||||||||| |||  |||||||||||||||||||||||||  | | |||||||||||| |||| ||||||||   ||||||| |||||||||||||||    
T  14553585 tttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggacttgaacctgtgacctt-tagtcacatgacaacaactttacca 14553487  T
Q  109 gttg 112  Q
    ||||    
T  14553486 gttg 14553483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 6024306 - 6024204
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| || |||||| | ||||||||||||| || |||||| |||| || || |||||||||| |  |||||| ||||||||||||||||    
T  6024306 ttggtgtattgtacgcagtcttaccatgttttttacacaagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttaccag 6024207  T
Q  110 ttg 112  Q
    |||    
T  6024206 ttg 6024204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 107
Target Start/End: Complemental strand, 9161191 - 9161099
Alignment:
Q  14 tgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    ||||||||||| |||||||| || ||||| ||||||| || |||||||||||||| |||| |||||||| | ||||||| ||||||||||||||    
T  9161191 tgtattgtacgcagccttactctgttttt-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 14975170 - 14975255
Alignment:
Q  38 ttttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggtta 123  Q
    ||||||||||||| || |||||||||||||| || |||||||||| | ||||||| |||||||||||||| |||| |||| |||||    
T  14975170 ttttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggtta 14975255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 15866092 - 15866213
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||  ||| ||| ||||||| ||||||||  ||| || ||||||||||| || ||||| ||||||| |  ||||||  ||||||    
T  15866092 tcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaa 15866189  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  15866190 ctttaccagttgggccaaggttac 15866213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 20400742 - 20400626
Alignment:
Q  8 atttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||| ||||| |||||| || |||||||| ||||||||||||| | |||||||||  |||| |||| |||||||| | ||||||| ||||||||| ||||    
T  20400742 atttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttcagtcacatgacaacaactatacc 20400643  T
Q  108 agttgtgccagggttac 124  Q
    | ||| |||| ||||||    
T  20400642 aattgcgccaaggttac 20400626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 7947433 - 7947531
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||||||| |||||||||||  |||||||||| | |||||||||||||| || |||| |||||||| | |||||   ||| ||||||||||    
T  7947433 tttggtgtattgtacgcagccttaccctggtttttacacaggaggttgtttccaggagttgaaccggtgacctttcagtcacgcaacaccaactttacc 7947531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 28007708 - 28007604
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacc--ttgctgtcacattacaac 98  Q
    ||||| |||||||||||||||||| ||||| ||||| ||||  ||||||| || | |||||||||||| |||||||||||  ||  |||||||| |||||    
T  28007708 tcccagcatttggtgtattgtacgcagcctgaccctgtttt--acacaagaggctctttccaggacttgaacccgtgaccttttcatgtcacatgacaac 28007611  T
Q  99 aacttta 105  Q
    |||||||    
T  28007610 aacttta 28007604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 32728211 - 32728314
Alignment:
Q  3 ccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaact 102  Q
    |||| ||||||| ||||||||  || |||||||| ||||||||| ||| |||||||||||  |||| || | |||||||| | ||||||| |||||||||    
T  32728211 ccactatttggtatattgtacacagtcttaccctgttttttacataagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaact 32728310  T
Q  103 ttac 106  Q
    ||||    
T  32728311 ttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 17432395 - 17432332
Alignment:
Q  28 ccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcaca 91  Q
    ||||||||| |||||||||||||  |||||||||||||||| |||| |||||||| | ||||||    
T  17432395 ccttaccctgttttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 24097638 - 24097547
Alignment:
Q  26 agccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgcca 117  Q
    ||||||||||| ||||||| ||||| || || ||| ||||||| ||| ||||||||| | || |||| ||| ||| ||||||||||||||||    
T  24097638 agccttaccctgttttttatacaagaggctggttcgaggacttaaactcgtgacctttcagtaacatgacatcaattttaccagttgtgcca 24097547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 24734678 - 24734599
Alignment:
Q  38 ttttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgcca 117  Q
    ||||||||||||| ||||||||| |||| || |||   ||||||| | ||||||| ||||||||||||||||||| ||||    
T  24734678 ttttttacacaagaggttgtttcaaggatttgaacttttgacctttcagtcacatgacaacaactttaccagttgcgcca 24734599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 117
Target Start/End: Complemental strand, 12889497 - 12889393
Alignment:
Q  12 ggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagtt 111  Q
    ||||||||||| | |||||| |||| ||||| ||||||| || ||||| || ||||| |||| |||||||| |  |||| | |||||||||||||| |||    
T  12889497 ggtgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc-gtt 12889399  T
Q  112 gtgcca 117  Q
    ||||||    
T  12889398 gtgcca 12889393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18277246 - 18277327
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||||||||||||  |||||  | |||||||||  |||||||||||| || |||||||| || || |||||||||||||    
T  18277246 tcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagaggctgtttccaagatttgaacccgtgacctt 18277327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 25557799 - 25557743
Alignment:
Q  7 catttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagga 65  Q
    |||||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||    
T  25557799 catttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgtttccagga 25557743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 26097234 - 26097178
Alignment:
Q  7 catttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccagga 65  Q
    |||||||||||||||||| ||||||||||  | ||||||||||| || |||||||||||    
T  26097234 catttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgtttccagga 26097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 2755485 - 2755583
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacc 107  Q
    |||||||||||||||| ||||||| |||||||||   | ||| || ||||| || ||||| ||||   |||||| | ||||||| ||||||||||||||    
T  2755485 tttggtgtattgtacgcagccttagcctatttttggtataagaggatgtttgcaagacttgaacctacgacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 24751139 - 24751176
Alignment:
Q  13 gtgtattgtacgtagccttaccctattttttacacaag 50  Q
    |||||||||||| || ||||||||||||||||||||||    
T  24751139 gtgtattgtacgcagtcttaccctattttttacacaag 24751176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 111
Target Start/End: Original strand, 27855500 - 27855601
Alignment:
Q  11 tggtgtattgtacgtagccttacccta-ttttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||| |||| |||||||||||| ||||||||||| |  | ||||| | |||||| ||| || ||| || | ||||||| |||| |||||||||||    
T  27855500 tggtgtattatacgcagccttaccctatttttttacacaggaagctgttttcgggacttaaactcgcgacatttcagtcacatgacaaaaactttaccag 27855599  T
Q  110 tt 111  Q
    ||    
T  27855600 tt 27855601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 17448389 - 17448325
Alignment:
Q  18 ttgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgacctt 82  Q
    ||||||| ||||||||||| ||||||||||||   ||||||| ||  |||| |||||||||||||    
T  17448389 ttgtacgcagccttaccctgttttttacacaaaatgttgttttcaaaacttgaacccgtgacctt 17448325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 32579507 - 32579436
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacc 73  Q
    ||||||||||||| |||||||||| || |||||| || |||||| || || || |||||||||||||| ||||    
T  32579507 tcccaccatttggggtattgtacgcaggcttaccgta-tttttataccagaggctgtttccaggacttgaacc 32579436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 30659 - 30538
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||||| |||| |||||| ||||  ||||||| || |||||||||||||| |||| |||||||| | ||||||| |||||||    
T  30659 tcccaccatttggtgtattgtacgcagccctaccctgtttt--acacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaa 30562  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    |||||||||||| |||| ||||||    
T  30561 ctttaccagttgcgccaaggttac 30538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 10892 - 10781
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||| ||| |||| |||||| ||||||||||||| |||||||| |||  ||| ||||||||||||| | ||||||| |||||||    
T  10892 tcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttttcagaccttgaacccgtgaccttccagtcacatgacaacaa 10793  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  10792 ctttaccagttg 10781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 4230 - 4128
Alignment:
Q  10 ttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||||| | ||||| ||| | ||||||||||| ||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||| ||    
T  4230 ttggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttactag 4131  T
Q  110 ttg 112  Q
    |||    
T  4130 ttg 4128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 10103 - 10212
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||| ||||||||||||||||| || ||||| || ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  10103 tcccactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 10200  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  10201 ctttaccagttg 10212  T

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Target: scaffold0187; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20431 - 20540
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||| ||||||||||||||||| || ||||| || ||||  ||||||| || |||||||||||||| ||||||||||||| | ||||||| |||||||    
T  20431 tcccactatttggtgtattgtacgcagtcttactctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 20528  T
Q  101 ctttaccagttg 112  Q
    ||||||||||||    
T  20529 ctttaccagttg 20540  T

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Target: scaffold0049 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 59051 - 58935
Alignment:
Q  9 tttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttacca 108  Q
    |||||||||||||||| || |||||||| ||||||| ||||| || |||||||||||||| ||||||||||||| | ||||||| |||| || |||||||    
T  59051 tttggtgtattgtacgcagtcttaccctgttttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttacca 58952  T
Q  109 gttgtgccagggttact 125  Q
    ||||  ||| |||||||    
T  58951 gttgctccaaggttact 58935  T

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Target: scaffold0005 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 226458 - 226582
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttttt-acacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaaca 99  Q
    |||||||||||| ||||||||| | ||||||||||| |||||| | ||||| || |||||| ||||||| || |||||||||| | ||||||| ||||||    
T  226458 tcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaaca 226557  T
Q  100 actttaccagttgtgccagggttac 124  Q
    ||||||||||||| |||| ||||||    
T  226558 actttaccagttgcgccaaggttac 226582  T

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Target: scaffold0258 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 13077 - 13199
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||| ||||||||||||| ||||||||| | ||||| || |||| || |||||||||||||| |||| |||||||| | ||||||| |||||||    
T  13077 tcccaccattcggtgtattgtacgcagccttaccttgttttt-acgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaa 13175  T
Q  101 ctttaccagttgtgccagggttac 124  Q
    ||||||| |||| |||| ||||||    
T  13176 ctttaccggttgcgccaaggttac 13199  T

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Target: scaffold0223 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 11211 - 11093
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    |||||||||||||||||||||| | ||||||||  | | ||||||||||| || |||||||||||||| ||||||||||||| | |||||| || |||||    
T  11211 tcccaccatttggtgtattgtaagcagccttac--tttgttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcaca-tagaacaa 11115  T
Q  101 ctttaccagttgtgccagggtt 122  Q
    |||||||||||| |||| ||||    
T  11114 ctttaccagttgcgccaaggtt 11093  T

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Target: scaffold1176 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 1640 - 1745
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaa 100  Q
    ||||| |||||||||||||||| | ||||||| ||| ||||  ||||||| |||||||| |||||||| ||||| ||||||| | ||||||| |||||||    
T  1640 tcccatcatttggtgtattgtatgcagccttatcctgtttt--acacaagaggttgttttcaggacttgaacccatgacctttcagtcacatgacaacaa 1737  T
Q  101 ctttacca 108  Q
    ||||||||    
T  1738 ctttacca 1745  T

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Target: scaffold0036 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35070 - 35183
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctatttt-ttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaa-c 98  Q
    |||||||||||||||||||||||| ||||||||||| ||||   ||||||| |  ||||| |||||||| ||||||||||||| | ||||||| ||||      
T  35070 tcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgaccttacagtcacatgacaata 35169  T
Q  99 aactttaccagttg 112  Q
    ||||||||||||||    
T  35170 aactttaccagttg 35183  T

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Target: scaffold0116 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 39 - 109
Target Start/End: Complemental strand, 8935 - 8865
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccag 109  Q
    ||||||||||||  ||||||||||||| || |||| |||||||| | ||||||| ||||||||||||||||    
T  8935 tttttacacaagaagttgtttccaggaattgaacctgtgaccttacagtcacatgacaacaactttaccag 8865  T

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Target: scaffold0024 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 83904 - 83834
Alignment:
Q  54 ttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    ||||||||| ||||| ||||||||||||| | ||||||| ||||||||||||| ||||| |||| ||||||    
T  83904 ttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttac 83834  T

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Target: scaffold0194 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 24692 - 24623
Alignment:
Q  55 tgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttgtgccagggttac 124  Q
    |||||||||||||| ||||||||||||| | ||||| | |||||||||||| || |||||||| ||||||    
T  24692 tgtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatcaattgtgccaaggttac 24623  T

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Target: scaffold0167 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 23681 - 23606
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggacttcaacccgt 76  Q
    |||||||||||| |  |||||||| ||||| ||||| ||||||||||||| |||||||| || ||||| |||||||    
T  23681 tcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagacttgaacccgt 23606  T

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Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 79
Target Start/End: Original strand, 72924 - 72999
Alignment:
Q  5 accatttggtgtattgtacgtagccttaccctattttttacacaagcg-gttgtttccaggacttcaacccgtgac 79  Q
    |||||||||||||||||| | ||||||||| | ||||||||||||| |  ||||||| ||||||| ||||||||||    
T  72924 accatttggtgtattgtaggcagccttaccgtgttttttacacaagagacttgtttctaggacttgaacccgtgac 72999  T

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Target: scaffold0015 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 48687 - 48746
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttcca 62  Q
    |||||||||||||||||||||||| ||||||||||  | ||||||||||| || ||||||||    
T  48687 tcccaccatttggtgtattgtacgcagccttaccc--tgttttacacaagaggctgtttcca 48746  T

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Target: scaffold0954 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3626 - 3560
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccctattttttacacaagcggttgtttccaggact 67  Q
    ||||| |||| |||||||| |||| ||||||||| ||| ||||||||||| || | |||||||||||    
T  3626 tcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggctctttccaggact 3560  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 24186 - 24220
Alignment:
Q  1 tcccaccatttggtgtattgtacgtagccttaccc 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  24186 tcccaccatttggtgtattgtacgcagccttaccc 24220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 112
Target Start/End: Complemental strand, 43173 - 43100
Alignment:
Q  39 tttttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacattacaacaactttaccagttg 112  Q
    |||||||||||| || |||||| ||||| | ||| ||||||||| |  |||||| |||| ||||||||||||||    
T  43173 tttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttaccagttg 43100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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