View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8103_low_11 (Length: 339)
Name: NF8103_low_11
Description: NF8103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8103_low_11 |
 | |
|
| [»] scaffold0029 (1 HSPs) |
| | |
|
| [»] scaffold0002 (2 HSPs) |
| | |
|
| [»] scaffold0131 (1 HSPs) |
| | |
|
| [»] scaffold0418 (2 HSPs) |
| | |
|
| [»] scaffold0112 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0029 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 15 - 334
Target Start/End: Complemental strand, 134768 - 134449
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134768 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
134669 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134668 |
tagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
134569 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
134568 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccaacccctctctccagcaccatcactacccctaagacgactcacc |
134469 |
T |
|
| Q |
315 |
tccctccaccaacacgaaac |
334 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
134468 |
tccctccaccaacatgaaac |
134449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 308; Significance: 1e-173; HSPs: 2)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 15 - 334
Target Start/End: Complemental strand, 312595 - 312276
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312595 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
312496 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312495 |
tagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
312396 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
312395 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccaacccctctctccagcaccatcactacccctaagacgactcacc |
312296 |
T |
|
| Q |
315 |
tccctccaccaacacgaaac |
334 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
312295 |
tccctccaccaacatgaaac |
312276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002; HSP #2
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 15 - 334
Target Start/End: Complemental strand, 328049 - 327730
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
328049 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
327950 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327949 |
tagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
327850 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
327849 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccaacccctctctccagcaccatcactacccctaagacgactcacc |
327750 |
T |
|
| Q |
315 |
tccctccaccaacacgaaac |
334 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
327749 |
tccctccaccaacatgaaac |
327730 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 283; Significance: 1e-158; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 15 - 305
Target Start/End: Complemental strand, 8654987 - 8654697
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654987 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
8654888 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8654887 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
8654788 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaaga |
305 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
8654787 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatccactctctccagcaccaacactacccctaaga |
8654697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 15 - 334
Target Start/End: Complemental strand, 3129893 - 3129577
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
3129893 |
acatcaagaagtaaagccctacactccgctaacat---ctcctcccactgccacaaacaacgtctccacctccacgtaacccctagctgctccgaatcaa |
3129797 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | || |
|
|
| T |
3129796 |
tagagaacaagtctgccacagacatgaacttattctctgttaactcaaacagtctactaaaacggacacaaaaaggaacatcccctaaccacctaccaaa |
3129697 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||||| || | ||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
3129696 |
ccaaaacaatgtatcagctccatctccaaccctcctagccacatgatcaacaaaccagccgccctctccatcaccatcactacccctaaaacgactcacc |
3129597 |
T |
|
| Q |
315 |
tccctccaccaacacgaaac |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
3129596 |
tccctccaccaacacgaaac |
3129577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 15 - 271
Target Start/End: Original strand, 47541151 - 47541406
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||||||||||||| ||| ||| |||||||||||||| |
|
|
| T |
47541151 |
acatcaagaagtaaagccctacactccgctaacatctcctccttccactgccacaaacgacgtctccacctccacataactcccggctgctccgaatcaa |
47541250 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
47541251 |
cagaaaacaagtctgccacagacatgaacttattctctgttaactcaaacagtctacaaaaacgaacacaaaaaggaacatcccctaaccacctatcaaa |
47541350 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaacca |
271 |
Q |
| |
|
|||||||||||||| | |||||||||||| ||| ||||||||| ||||| ||||||| |
|
|
| T |
47541351 |
ccaaaacaacgtatcatctccatctccaa-ccttctagccacatgatcaacaaacca |
47541406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 7663153 - 7662966
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||| |||||||||||||||||||| ||||| ||||||||||| |||| |||| ||||||| |||||| |
|
|
| T |
7663153 |
acatcaagaagtaaagccatacactccactaacatctcctcctcccactgccacaatctacgcctccacctccaaaaaaacccctgctgctccaaatcaa |
7663054 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaa |
202 |
Q |
| |
|
|||| ||||||||||||| |||||| | |||||||||| |||||||||||| ||||| ||||||||||| || |||||||||||||| |
|
|
| T |
7663053 |
cagagaacaagtctgccatagacatgagcttattctctattaactcaaacaatctacgaaaacggacacagaacggaacatcccctaa |
7662966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 2631624 - 2631829
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
2631624 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
2631723 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| |||||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
2631724 |
cagagagcaagtcggccacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
2631823 |
T |
|
| Q |
215 |
ccaaaa |
220 |
Q |
| |
|
|||||| |
|
|
| T |
2631824 |
ccaaaa |
2631829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 20675248 - 20675454
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||| ||||||||| | | ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
20675248 |
acatcaagaagtaaagtcctacactcatcaagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
20675347 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|| | | |||||| ||||| || ||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||||||||||||| | |
|
|
| T |
20675348 |
caaagagcaagtcggccacggatatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctaaccacctatcaga |
20675447 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
20675448 |
ccaaaac |
20675454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 23873390 - 23873240
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
23873390 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccattacctacgtctccacctccacacctccccccaccgctccgaatcaa |
23873291 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaaca |
165 |
Q |
| |
|
|||| | |||||| || || |||||| |||||||||||||||||||||||| |
|
|
| T |
23873290 |
cagagagcaagtcggcaacggacatagacttattctctgttaactcaaaca |
23873240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 55298846 - 55298996
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| || ||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
55298846 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccataaactacgtctccacctccacacctccccccaccgctccgaatcaa |
55298945 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaaca |
165 |
Q |
| |
|
|||| | |||||| || || |||||| |||||||||||||||||||||||| |
|
|
| T |
55298946 |
cagagagcaagtcggcaacggacatagacttattctctgttaactcaaaca |
55298996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 211
Target Start/End: Complemental strand, 8486895 - 8486699
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||| ||| ||| |||| |||||||||||| |||||||||||||||||||||| |||||||| | |||||||||| |
|
|
| T |
8486895 |
acatcaagaagtaaagccctacactaatctagcaactccttctcccactgccataacctacgtctccacctccacacctccccccaccggtccgaatcaa |
8486796 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatc |
211 |
Q |
| |
|
|||| | |||||| | || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| |
|
|
| T |
8486795 |
cagagagcaagtcgacgacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatc |
8486699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 334
Target Start/End: Complemental strand, 7662952 - 7662904
Alignment:
| Q |
286 |
caccatcactacccctaagacgactcacctccctccaccaacacgaaac |
334 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
7662952 |
caccaccactatccctaatacgactcacctccccccaccaacacgaaac |
7662904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 49926180 - 49926112
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccac |
83 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||||| |||||||||||| |||||| || || |||||| |
|
|
| T |
49926180 |
acatcaagcagaaaagccctacactccactaacaactcctcctcccacgcccacaatctccgcctccac |
49926112 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 19647935 - 19648003
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccac |
83 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||| |||||||||||| |||||| || || |||||| |
|
|
| T |
19647935 |
acatcaagcagaaaagccctacactccactaacatctcctcctcccacgcccacaatctccgcctccac |
19648003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 29553654 - 29553586
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccac |
83 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||| |||||||||||| |||||| || || |||||| |
|
|
| T |
29553654 |
acatcaaacagtaaagtcctacactcctctaacaactcctcctcccacgcccacaatctccgcctccac |
29553586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 15 - 334
Target Start/End: Complemental strand, 10486834 - 10486515
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
10486834 |
acatcaagaagtaaagccctacactccgctaacatgtcctcctcccactgccacaacctacgtctccacctccacataaccccccgctgctccgaatcaa |
10486735 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
10486734 |
cagagaacaagtctgccacagacatgaacttattctatgttaactcaaacagcctacgaaaacggacacaaaaaggaagatcccctaaccacctatccaa |
10486635 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| | | ||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
10486634 |
ccaaaacaacgtatcagctccatctccaaccctcctagccacatgatcaacaaaccagctgcactctccatcaccatcactacccctaagacgactcacc |
10486535 |
T |
|
| Q |
315 |
tccctccaccaacacgaaac |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
10486534 |
tccctccaccaacacgaaac |
10486515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 34481173 - 34481408
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
34481173 |
acatcaagaagtaaagccctacactcctctagcaacccctcctcccactgccataacctacgtctccacctccacacttccccccaccgctccgaatcaa |
34481272 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | ||| | ||||||||||||| |||||||||||||||||||||||| || || || | ||||||| |||||| ||||||||||||||||| | |
|
|
| T |
34481273 |
cagagagcaaatatgccacagacatagacttattctctgttaactcaaacaaccgactaaacctcacacaaagaggaacctcccctaaccacctatcgga |
34481372 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcct |
250 |
Q |
| |
|
||||||| | |||| ||| ||||| ||||| ||||| |
|
|
| T |
34481373 |
ccaaaacgaagtatcagccccatcaccaactctcct |
34481408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 587742 - 587859
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |||||||||||| ||| | |||||| ||||||||||| | | ||||||| ||||||||| | |
|
|
| T |
587742 |
acatcaagaagtaaagccctacactcctctaacatatcctcctcccacatccatagcctacgcctccacctccagacatccccccaatgctccgaactca |
587841 |
T |
|
| Q |
115 |
cagataacaagtctgcca |
132 |
Q |
| |
|
|||| ||||||| ||||| |
|
|
| T |
587842 |
cagagaacaagtttgcca |
587859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 251
Target Start/End: Complemental strand, 35122620 - 35122384
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||| |||||||||||| |||| |||| || ||||||||| ||||||||||||||||||||||||| |||||| | ||||||| |||| |
|
|
| T |
35122620 |
acatcaagcagtaaagccctaagctcctctaataaagtctcctcccaagcccacaacctacgtctccacctccacccaacccctccctgctccaggtcaa |
35122521 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
||| |||| | |||||||| || || ||||| | ||| ||||||| |||||| || || ||| |||||||||||| | |||||||||| | |
|
|
| T |
35122520 |
gagagaacatattcgccacagaaatggttttgttctcagctaagtcaaacaacctacgaaaccgctcactaaaaggaacatcatcaaaccacctatgaga |
35122421 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctccta |
251 |
Q |
| |
|
|||||||||||||| ||| ||||| || ||| ||||| |
|
|
| T |
35122420 |
ccaaaacaacgtatcagcaccatcccccaccttccta |
35122384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 27795720 - 27795756
Alignment:
| Q |
26 |
taaagccctacactccgctaacaagtcctcctcccac |
62 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
27795720 |
taaagccctacactcctctaccaagtcctcctcccac |
27795756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 21528387 - 21528685
Alignment:
| Q |
15 |
acatcaagaagtaaagccctaca----ctccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaa |
110 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
21528387 |
acatcaagaagtaaagccctacgtctccaccgctaacatgtcctcctcccactaccataacctacgtctccacctccacataaccccccattgctccgaa |
21528486 |
T |
|
| Q |
111 |
tcaacagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctat |
210 |
Q |
| |
|
|||||||| ||||||||| | |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21528487 |
tcaacagagaacaagtctccaacagacatgaacttattctctgttaactcaaacagcctacgaaaacggacacaaaaaggaacatcccctaaccacctat |
21528586 |
T |
|
| Q |
211 |
ccaaccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgac |
309 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
21528587 |
ccaaccaaaacaacgtatcagcttcatctccaaccctcctagccacatgatcaacaaaccatccgctctctccatcaccatcactacccctaagacgac |
21528685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 326
Target Start/End: Original strand, 36306012 - 36306321
Alignment:
| Q |
17 |
atcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaaca |
116 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||| ||||||||||| | ||||||| ||||||| |||||||| |
|
|
| T |
36306012 |
atcaagaagtaaagccctacactcctctaacatctcctccttccactgccacaatctacgcctccacctccaaacaaccccctgctgctccaaatcaaca |
36306111 |
T |
|
| Q |
117 |
gataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaacc |
216 |
Q |
| |
|
|| ||||||||||||||| |||| | ||||||||| |||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
36306112 |
gagaacaagtctgccacatacatgagcttattctccgttaactcaaacagtctacgaaaaaggacacagaaaggaacatcccctaaccacctatcatacc |
36306211 |
T |
|
| Q |
217 |
aaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctc |
316 |
Q |
| |
|
|||||||||||| || ||||||||||||||||||||||| | | ||||||| || | || || ||| | ||||| | ||||||||||||||||| |
|
|
| T |
36306212 |
aaaacaacgtatcagaaccatctccaaccctcctagccacgtggccgacaaaccacccacaatcaccctcactaacactatcactaagacgactcacctc |
36306311 |
T |
|
| Q |
317 |
cctccaccaa |
326 |
Q |
| |
|
|||||||||| |
|
|
| T |
36306312 |
cctccaccaa |
36306321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 238
Target Start/End: Original strand, 37530792 - 37531015
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
37530792 |
acatcaagaagtaaagccctacactcctctagcaacccctcctcccactgccataacctacgtctccacctccacacttccccccaccgctccgaatcaa |
37530891 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | ||||||||||||| ||||| ||||||||||||||||||||||| || || | | ||||||| |||||| ||||||||||||||||| | |
|
|
| T |
37530892 |
cagagagcaagtctgccacatacatagtcttattctctgttaactcaaacaaccgactaagtctcacacaaagaggaacctcccctaaccacctatcaga |
37530991 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatc |
238 |
Q |
| |
|
||||||| | |||| ||| ||||| |
|
|
| T |
37530992 |
ccaaaacgaagtatcagccccatc |
37531015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 32353211 - 32353061
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
32353211 |
acatcaagaagtaaagccctacactcatctagcaactcctccttccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
32353112 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaaca |
165 |
Q |
| |
|
|||| | |||||| ||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
32353111 |
cagagagcaagtcggccacggacatagacttattctctgttaactcaaaca |
32353061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 48073345 - 48073139
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||| |||||| ||| ||| ||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
48073345 |
acatcaagaagtaaagccccacactcatctagcaactcctcctcccactcccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
48073246 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
48073245 |
cagagagcaagtcggcaacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
48073146 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
48073145 |
ccaaaac |
48073139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 48265632 - 48265548
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaacccccc |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
48265632 |
acatcaagaagtaaagccctacactccgctaacaactcctcctcccactgccacaacctacgtctccacctccacataacccccc |
48265548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 30970522 - 30970447
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccaca |
90 |
Q |
| |
|
|||||||||||||| |||||||||||||| | || |||||||||||| |||||| ||||| ||||||||||||| |
|
|
| T |
30970522 |
acatcaagaagtaaggccctacactccgccaccatctcctcctcccacgcccacaatctacgcctccacctccaca |
30970447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 16873406 - 16873332
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccac |
89 |
Q |
| |
|
|||||||| |||||||||||| |||| |||| || ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
16873406 |
acatcaagcagtaaagccctaagctcctctaataaaatctcctcccaagcccacaacctacgtctccacctccac |
16873332 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 25504907 - 25504839
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccac |
83 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||| |||||||||||| |||||| || || |||||| |
|
|
| T |
25504907 |
acatcaagcagaaaagccctacactccactaacatctcctcctcccacgcccacaatctccgcctccac |
25504839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 15 - 302
Target Start/End: Complemental strand, 49731846 - 49731559
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
49731846 |
acatcaagaagtaaagccctacactccgccaacaactcctcctcccactgccacaaactacgtctccacctccacataaccccccgctgctccggatcaa |
49731747 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| ||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
49731746 |
cagagaacaagtctgccacatacatgaacttattctctgttaactcaaacagtctacgaaaacggacacaaaaaggaacatcccctaaccacctatcaaa |
49731647 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactaccccta |
302 |
Q |
| |
|
||||||||| || | |||||||||||||||||||||||||||| ||||| ||||||| || | ||||||| ||||||||||||||||| |
|
|
| T |
49731646 |
ccaaaacaatgtgtcagctccatctccaaccctcctagccacatgatcaacaaaccagccgcactctccatcaccatcactaccccta |
49731559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 15 - 331
Target Start/End: Complemental strand, 30167258 - 30166942
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||| ||| ||||||| ||||| |
|
|
| T |
30167258 |
acatcaagaagtaaagtcctacactccgctaacatctcctcctcccactgccacaatctacgcctccacctccaaaaaacaccctgctgctccagatcaa |
30167159 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| ||||||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
30167158 |
cagagaacaagtctgccacaaacatgagcttattctctgttaactcaaacaatctacgaaaacggacacagaacggaacatcccctaaccacctatccaa |
30167059 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||||||||||| || |||||||||| || | || || ||||| ||||| |||||| |||||||||| |
|
|
| T |
30167058 |
ccaaaacaacgtatcagaaccatcaccaaccctcctagccacgtgaccaccaaaccacccacagtcaccctcaccagcactatccctaatacgactcacc |
30166959 |
T |
|
| Q |
315 |
tccctccaccaacacga |
331 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
30166958 |
tccctccaccaacacga |
30166942 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 2813414 - 2813208
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
2813414 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
2813315 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
2813314 |
cagagagcaagtcggcaacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
2813215 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
2813214 |
ccaaaac |
2813208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 29309634 - 29309840
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| | |
|
|
| T |
29309634 |
acatcaagaagtaacgccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcga |
29309733 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| ||||| |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
29309734 |
cagagagcaagtcggccacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
29309833 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
29309834 |
ccaaaac |
29309840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 6176392 - 6176186
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
6176392 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgctataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
6176293 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| || || |||||| ||||||||||| |||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
6176292 |
cagagagcaagtcggcgacggacatagacttattctctattaactcaaacaaccgtctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
6176193 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
6176192 |
ccaaaac |
6176186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 139
Target Start/End: Original strand, 9379323 - 9379447
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
9379323 |
acatcaagtagtaatgccctacactccgctaacatcccctcctcccactgccataacctgcgcctccacctccacaaatccccccactgctctgaatcaa |
9379422 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacat |
139 |
Q |
| |
|
|| | ||||||| ||||||| |||| |
|
|
| T |
9379423 |
catagaacaagtttgccacatacat |
9379447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 23601999 - 23602074
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccaca |
90 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
23601999 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctatgtctccacctccaca |
23602074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 25873022 - 25872955
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctcca |
82 |
Q |
| |
|
||||||| ||||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||| |
|
|
| T |
25873022 |
acatcaaaaagtaaagccctacactcctctagcaacccctcctcccactgccataacctacgtctcca |
25872955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 8943596 - 8943653
Alignment:
| Q |
33 |
ctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccaca |
90 |
Q |
| |
|
|||||||||||| |||| || ||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
8943596 |
ctacactccgcttacaaatcttcctcccacgcccacaacctacgtctccacttccaca |
8943653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 14867699 - 14867625
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccac |
89 |
Q |
| |
|
|||||||| | ||| |||||||||||| |||| || ||||||||||| ||||||||| |||||||| |||||| |
|
|
| T |
14867699 |
acatcaagtattaaggccctacactcctctaataaaacctcctcccacgcccacaacctccgtctccaactccac |
14867625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 46248776 - 46248738
Alignment:
| Q |
23 |
aagtaaagccctacactccgctaacaagtcctcctccca |
61 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
46248776 |
aagtaaagccctacactcccctaacaagtcttcctccca |
46248738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 48569944 - 48569906
Alignment:
| Q |
24 |
agtaaagccctacactccgctaacaagtcctcctcccac |
62 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
48569944 |
agtaaagccctacactcctctaccaagtcctcctcccac |
48569906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 15 - 331
Target Start/End: Complemental strand, 15653619 - 15653303
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||| |||||| |
|
|
| T |
15653619 |
acatcaagaagtaaagccctacactccgctaacatctcctcctcccactgccacaatctacgcctccacctccagaaaaccccctgctgctccaaatcaa |
15653520 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| ||||||||||||| |||||| | ||||||||| |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||| || |
|
|
| T |
15653519 |
cagagaacaagtctgccatagacatgagcttattctccgttaactcaaacagtctacgaaaacgggcacaaaaaggaacatcccctaaccacctatcaaa |
15653420 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
|||||||||||||| || |||||||||||||||||||||||| | || ||||||| || | || || ||||| ||||| ||||||||||||||||| |
|
|
| T |
15653419 |
ccaaaacaacgtatcagatccatctccaaccctcctagccacgtggccaacaaaccacccacaatcaccctcaccaacactatccctaagacgactcacc |
15653320 |
T |
|
| Q |
315 |
tccctccaccaacacga |
331 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
15653319 |
tccctccaccaacacga |
15653303 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 331
Target Start/End: Original strand, 46623966 - 46624235
Alignment:
| Q |
62 |
ctgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaacagataacaagtctgccacagacataaacttattctctgttaactca |
161 |
Q |
| |
|
||||||||| ||||| ||||||||||| |||| ||| ||||||| |||||||||| |||||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
46623966 |
ctgccacaaactacgcctccacctccaaaaaaatccctgctgctccaaatcaacagagaacaagtctgccacagacatgagcttattctccgttaactca |
46624065 |
T |
|
| Q |
162 |
aacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtattagctccatctccaaccctcctagccacaagat |
261 |
Q |
| |
|
||||| || || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||||||||||| || |
|
|
| T |
46624066 |
aacagtctgcgaaaacggacacagaaaggaacatcccctaaccacctatcaaaccaaaacaacgtatcagaaccatctctaaccctcctagccacgtgac |
46624165 |
T |
|
| Q |
262 |
caccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccaccaacacga |
331 |
Q |
| |
|
|| ||||||| || | || || | ||| ||||| |||||| ||||||||||||||||||||||||||| |
|
|
| T |
46624166 |
caacaaaccacccacagtcaccctcgccaacactatccctaatacgactcacctccctccaccaacacga |
46624235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 221
Target Start/End: Original strand, 13440279 - 13440485
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||| |||||| ||| ||| ||||||||||||| ||| || ||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
13440279 |
acatcaagaagtaaagcccaacactcatctagcaactcctcctcccactaccataaactacgtctccacctccacacctccccccaccgctccgaatcaa |
13440378 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
13440379 |
cagagagcaagtcggcaacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
13440478 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
13440479 |
ccaaaac |
13440485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 12378639 - 12378436
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| || |||| |||| ||||| |||||||| ||| ||| | || |
|
|
| T |
12378639 |
acatcaagaagt---gccctacactccgctaacatctcctcctcccactgccacaacctgcgcctccgcctcaacaaatccccccaccgcttcgacttaa |
12378543 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|| | ||||| | |||||||||||| | ||||||||| ||||||||||||| ||| | | || |||| | |||||||||||||| ||||||||| | |
|
|
| T |
12378542 |
caaagaacaaatttgccacagacatgatcttattctccattaactcaaacagtctatgataccgctcacagagaggaacatcccctatccacctatcata |
12378443 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
12378442 |
ccaaaac |
12378436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 45943077 - 45943152
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccaca |
90 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| || |||| |||||||||||||| |
|
|
| T |
45943077 |
acatcaagaagtaaagccctacactcctctagcaactcctcctcccactgccataatctacatctccacctccaca |
45943152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 24 - 147
Target Start/End: Original strand, 43105546 - 43105669
Alignment:
| Q |
24 |
agtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaacagataaca |
123 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||||| ||||||||||| || ||||||||||||||| | ||||| || | |||| | ||| |||| |
|
|
| T |
43105546 |
agtaacgccctacactctgctaacatctcctcctcccattgccacaacctgcgcctccacctccacaaatctccccattgttgcgaactagtagagaaca |
43105645 |
T |
|
| Q |
124 |
agtctgccacagacataaacttat |
147 |
Q |
| |
|
|||||||||| |||| | |||||| |
|
|
| T |
43105646 |
agtctgccaccgacaaagacttat |
43105669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 41339750 - 41339825
Alignment:
| Q |
14 |
gacatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccac |
89 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||| || |||||||||||| ||||||||| | || |||||||||| |
|
|
| T |
41339750 |
gacatcaaatagtaaagtcctacactcctctaataattcctcctcccacgcccacaacctgcatcgccacctccac |
41339825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 19728713 - 19728787
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccac |
89 |
Q |
| |
|
|||||||| ||||| ||||||||||| |||| || ||||||||||| ||||||||| |||||||| |||||| |
|
|
| T |
19728713 |
acatcaagtagtaagaccctacactcctctaataaaacctcctcccacgcccacaacctccgtctccaactccac |
19728787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 27724011 - 27723973
Alignment:
| Q |
23 |
aagtaaagccctacactccgctaacaagtcctcctccca |
61 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
27724011 |
aagtaaagccctacactcccctaacaagtcttcctccca |
27723973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 46623931 - 46623964
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaaca |
48 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |
|
|
| T |
46623931 |
acatcaagaagtaaagccctacactctgctaaca |
46623964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 45992802 - 45992870
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccac |
83 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||| |||||||||||| |||||| || || |||||| |
|
|
| T |
45992802 |
acatcaagcagaaaagccctacactccactaacatctcctcctcccacgcccacaatctccgcctccac |
45992870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 168; Significance: 5e-90; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 15 - 334
Target Start/End: Original strand, 7452578 - 7452897
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||| ||||||||||| | ||||||| ||||||| |||||| |
|
|
| T |
7452578 |
acatcaagaagtaaagccctacactcctctaataacacctcctcccactgccacaatctacgcctccacctccaaacaaccccctgctgctccaaatcaa |
7452677 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
7452678 |
cagagaacaagtctgccacagacataagcttattctccgttaactcaaacagtctacgaaaacggacacagaaaggaacatcccctaaccacctatcata |
7452777 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||| | | |||||| || | || || ||||| ||||| ||||||||||||||||| |
|
|
| T |
7452778 |
ccaaaacaacgtatcagaaccatctccaaccctcctagccacgtgggcgagaaaccacccacaatcaccctcaccaacactatccctaagacgactcacc |
7452877 |
T |
|
| Q |
315 |
tccctccaccaacacgaaac |
334 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
7452878 |
tccctccaccaacacgaaac |
7452897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 15 - 220
Target Start/End: Complemental strand, 16420924 - 16420719
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||| |||||||||||||||| ||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
16420924 |
acatcgagaagtaaagccctacgctcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
16420825 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| |||||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
16420824 |
cagagagcaagtcggccacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
16420725 |
T |
|
| Q |
215 |
ccaaaa |
220 |
Q |
| |
|
|||||| |
|
|
| T |
16420724 |
ccaaaa |
16420719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19384624 - 19384572
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgcca |
67 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
19384624 |
acatcaagaagtaaagccctacactccactaacatctcctcctcccactgcca |
19384572 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 12134563 - 12134628
Alignment:
| Q |
24 |
agtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccac |
89 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||| ||||||| |||| | |||||||||| |
|
|
| T |
12134563 |
agtaaagccctacactcctctaccaagtcctcctcccacgcccacaacgtacgccgccacctccac |
12134628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 13879390 - 13879354
Alignment:
| Q |
26 |
taaagccctacactccgctaacaagtcctcctcccac |
62 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
13879390 |
taaagccctacactcctctaccaagtcctcctcccac |
13879354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 158; Significance: 5e-84; HSPs: 13)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 15 - 331
Target Start/End: Original strand, 45421745 - 45422062
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaacccccca-ctgctccgaatca |
113 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||||| |||| |||| ||||||| |||| |
|
|
| T |
45421745 |
acatcaagaagaaaagccctacactccgctaacatctcctcctcccactgcgacaatctacgcctccacctccaaaaaaaacccctgctgctccagatca |
45421844 |
T |
|
| Q |
114 |
acagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatcca |
213 |
Q |
| |
|
||||| ||||||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
45421845 |
acagagaacaagtctgccacatacatgagcttattctctgttaactcaaacaatctacgaaaacggacacagaacggaacatcccctaaccacctatcca |
45421944 |
T |
|
| Q |
214 |
accaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcac |
313 |
Q |
| |
|
||||||||||||||| || ||||| ||||||||||||||||| || |||||||||| || | || || ||||| ||||| |||||| ||||||||| |
|
|
| T |
45421945 |
accaaaacaacgtatcagaaccatcaccaaccctcctagccacgtgaccaccaaaccacccacagtcaccctcaccagcactatccctaatacgactcac |
45422044 |
T |
|
| Q |
314 |
ctccctccaccaacacga |
331 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
45422045 |
ctccctccaccaacacga |
45422062 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 15 - 336
Target Start/End: Original strand, 13550350 - 13550671
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||| ||||||||| |||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
13550350 |
acatcaagaattaaagccctgcactcctctagcaagtcctcatcccactgccataacctacgtctccacctccacacatccccccactgctccgaatcaa |
13550449 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| ||||| | ||| |||||||||||||||||||||||| || || || | |||| || |||| | ||||||| ||||||||| || |
|
|
| T |
13550450 |
cagaaagcaagtccgccacgaatatagacttattctctgttaactcaaacaaccgactaaacctcacacgaagaggagcctcccctatccacctatcgaa |
13550549 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
|||||| | |||| || ||||| ||||| ||||| ||| |||| ||||||| || || | ||| ||||| | ||||||||||||||||||||| |
|
|
| T |
13550550 |
ccaaaatgatgtatctgccccatcaccaactctcctcaacacctgatcctcaaaccagccgctaccaccaacaccaaccctacccctaagacgactcacc |
13550649 |
T |
|
| Q |
315 |
tccctccaccaacacgaaactc |
336 |
Q |
| |
|
||| ||||||||| ||||||| |
|
|
| T |
13550650 |
tccgaccaccaacaagaaactc |
13550671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 26894522 - 26894320
Alignment:
| Q |
19 |
caagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaacaga |
118 |
Q |
| |
|
|||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||| |
|
|
| T |
26894522 |
caagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacaccttcccccaccgctccgaagcaacaga |
26894423 |
T |
|
| Q |
119 |
taacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaa |
218 |
Q |
| |
|
| |||||| | ||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| ||||| |
|
|
| T |
26894422 |
gagcaagtcggtgacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaa |
26894323 |
T |
|
| Q |
219 |
aac |
221 |
Q |
| |
|
||| |
|
|
| T |
26894322 |
aac |
26894320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 26899961 - 26899759
Alignment:
| Q |
19 |
caagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaacaga |
118 |
Q |
| |
|
|||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||| ||||||| |
|
|
| T |
26899961 |
caagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacaccttcccccaccgctccgaagcaacaga |
26899862 |
T |
|
| Q |
119 |
taacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaa |
218 |
Q |
| |
|
| |||||| | ||||||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| ||||| |
|
|
| T |
26899861 |
gagcaagtcggtgacagacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcagaccaa |
26899762 |
T |
|
| Q |
219 |
aac |
221 |
Q |
| |
|
||| |
|
|
| T |
26899761 |
aac |
26899759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 43627725 - 43627875
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
43627725 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccacctctccgaatcaa |
43627824 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaaca |
165 |
Q |
| |
|
||| | |||||| ||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
43627825 |
tagagagcaagtcggccacgaacatagacttattctctgttaactcaaaca |
43627875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 31085551 - 31085452
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| | |||||||||||||| | ||||||||||||| ||||||| |
|
|
| T |
31085551 |
acatcaagaagtaaagccctacactctgctaacagctcctcctcccactgtcacaacctgcatctccacctccacacatccccccactgctctgaatcaa |
31085452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 33548098 - 33548197
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
33548098 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
33548197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 336
Target Start/End: Original strand, 13550882 - 13551124
Alignment:
| Q |
94 |
ccccccactgctccgaatcaacagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaac |
193 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| ||||| | ||| |||||||||||||||||||||||| || || || | |||| || |||| | |
|
|
| T |
13550882 |
ccccccactgctccgaatcaacagaaagcaagtccgccacgaatatagacttattctctgttaactcaaacaaccgactaaacctcacacgaagaggagc |
13550981 |
T |
|
| Q |
194 |
atcccctaaccacctatccaaccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatca |
293 |
Q |
| |
|
||||||| ||||||||| |||||||| | |||| || ||||| ||||| ||||| ||| |||| ||||||| || || | ||| ||||| | |
|
|
| T |
13550982 |
ctcccctatccacctatcgaaccaaaatgatgtatctgccccatcaccaactctcctcaacacctgatcctcaaaccagccgctaccaccaacaccaacc |
13551081 |
T |
|
| Q |
294 |
ctacccctaagacgactcacctccctccaccaacacgaaactc |
336 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| ||||||| |
|
|
| T |
13551082 |
ctacccctaagacgactcacctccgaccaccaacaagaaactc |
13551124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 22052853 - 22052911
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacct |
73 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||| |
|
|
| T |
22052853 |
acatcaagaagtaaagccctacactcctctagcaactcctcctcccactgccataacct |
22052911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 36804137 - 36804196
Alignment:
| Q |
14 |
gacatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacct |
73 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
36804137 |
gacatcaaatagtaaagccctacactcctctaacaagtcctcctcccacgcccacaacct |
36804196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 36804352 - 36804400
Alignment:
| Q |
14 |
gacatcaagaagtaaagccctacactccgctaacaagtcctcctcccac |
62 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
36804352 |
gacatcaaatagtaaagccctacactcctctaacaagtcctcctcccac |
36804400 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 26679225 - 26679266
Alignment:
| Q |
179 |
gacacaaaaaggaacatcccctaaccacctatccaaccaaaa |
220 |
Q |
| |
|
|||||||||||||||||| || | |||||||||||||||||| |
|
|
| T |
26679225 |
gacacaaaaaggaacatcaccaacccacctatccaaccaaaa |
26679266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 40176905 - 40176941
Alignment:
| Q |
26 |
taaagccctacactccgctaacaagtcctcctcccac |
62 |
Q |
| |
|
|||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
40176905 |
taaagccctacactcctctaccaagtcctcctcccac |
40176941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0131 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: scaffold0131
Description:
Target: scaffold0131; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 141 - 334
Target Start/End: Complemental strand, 4337 - 4144
Alignment:
| Q |
141 |
aacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtattagctccatctc |
240 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4337 |
aacttattctctattaactcaaacagcctacgaaaacggacacaaaaaggaacatcccctaaccacctatccaaccaaaacaacgtatgagctccatctc |
4238 |
T |
|
| Q |
241 |
caaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacctccctccaccaacacgaaac |
334 |
Q |
| |
|
||||||||| ||||||| ||||| ||||||| || ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
4237 |
caaccctccgagccacatgatcaacaaaccaaccgctctctccatcaccatcactacccctaatacgactcacctccctccaccaccacgaaac |
4144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 110; Significance: 2e-55; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 336
Target Start/End: Original strand, 26205574 - 26205895
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||| ||||||| |
|
|
| T |
26205574 |
acatcaagaagtaaagccctacactcctctagcaactcctcctcccactgccataacctacgtatccacctccacaaatccccccaccgctttgaatcaa |
26205673 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||| |||||||||||||| || || || | |||| || |||| | |||| || ||||||||| || |
|
|
| T |
26205674 |
cagatagcaagtccgccacggacataaacttattctttgttaactcaaacaaccgactaaacctcacacgaagaggagcctcccttatccacctatcgaa |
26205773 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
||||||| | |||| ||| |||| ||||| ||||| ||| |||| |||||| || || | ||| ||||| | ||||||||||||||||||||| |
|
|
| T |
26205774 |
ccaaaacgatgtatcagcctcatcaccaactctcctcaacacctgatccttaaaccaaccgctaccaccaacaccaaccctacccctaagacgactcacc |
26205873 |
T |
|
| Q |
315 |
tccctccaccaacacgaaactc |
336 |
Q |
| |
|
||| ||||||||| ||||||| |
|
|
| T |
26205874 |
tccgaccaccaacaagaaactc |
26205895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 15 - 336
Target Start/End: Original strand, 25318080 - 25318401
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||| ||||||| |
|
|
| T |
25318080 |
acatcaagaagtaaagccctacactcctctagcaactcctcctcccactgccataacctacgtatccacctccacaaatccccccaccgctttgaatcaa |
25318179 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||||| |||||| ||||| |||||||||||||||| |||||||||||||| || || || | |||| || |||| | |||| || ||||||||| || |
|
|
| T |
25318180 |
cagatagcaagtccgccacggacataaacttattctttgttaactcaaacaaccgactaaacctcacacgaagaggagcctcccttatccacctatcgaa |
25318279 |
T |
|
| Q |
215 |
ccaaaacaacgtattagctccatctccaaccctcctagccacaagatcaccaaaccatcccctctctccagcaccatcactacccctaagacgactcacc |
314 |
Q |
| |
|
||||||| | |||| ||| |||| ||||| ||||| ||| |||| |||||| || || | ||| ||||| | |||| |||||||||||||||| |
|
|
| T |
25318280 |
ccaaaacgatgtatcagcctcatcaccaactctcctcaacacctgatccttaaaccaaccgctaccaccaacaccaaccctacacctaagacgactcacc |
25318379 |
T |
|
| Q |
315 |
tccctccaccaacacgaaactc |
336 |
Q |
| |
|
||| ||||||||| ||||||| |
|
|
| T |
25318380 |
tccgaccaccaacaagaaactc |
25318401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 221
Target Start/End: Complemental strand, 23347381 - 23347175
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |
|
|
| T |
23347381 |
acatcaagaagtaaagccctacactcatctagcaactcctcctcccactgccataacctacgtctccacctccacacctccccccaccgctccgaatcaa |
23347282 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaaccacctatccaa |
214 |
Q |
| |
|
|||| | |||||| || || |||||| |||||||||||||||||||||||| || | || || ||||||| |||| | ||||||| ||||||||| | |
|
|
| T |
23347281 |
cagagagcaagtcggcgacggacatagacttattctctgttaactcaaacaaccgcctaaaccgcacacaaagaggagcctcccctatccacctatcaga |
23347182 |
T |
|
| Q |
215 |
ccaaaac |
221 |
Q |
| |
|
||||||| |
|
|
| T |
23347181 |
ccaaaac |
23347175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 15674051 - 15674205
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaacc----ccccactgctccgaa |
110 |
Q |
| |
|
|||||||||||||||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| || ||||| |||| ||| |
|
|
| T |
15674051 |
acatcaagaagtaaagccctgcactcatctagcaactcctcctcccactgccacaacctacgtctccacctccacacctccccggccccaacgctctgaa |
15674150 |
T |
|
| Q |
111 |
tcaacagataacaagtctgccacagacataaacttattctctgttaactcaaaca |
165 |
Q |
| |
|
|||||||| | ||||| |||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
15674151 |
tcaacagagagtaagtcggccacagacatagacttattctccgttaactcaaaca |
15674205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 33630323 - 33630378
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaa |
70 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
33630323 |
acatcaaaaaataaagccctacactccgctaacatctcctcctcccactgccacaa |
33630378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 48
Target Start/End: Original strand, 1683266 - 1683299
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaaca |
48 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
1683266 |
acatcaagaagtaaagccctacactccgctaaca |
1683299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 4474935 - 4474998
Alignment:
| Q |
26 |
taaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccac |
89 |
Q |
| |
|
||||| |||| ||||| |||| || | |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4474935 |
taaagtcctaaactcctctaataaattctcctcccacgcccacaacctacgtctccacctccac |
4474998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 19255866 - 19255934
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccac |
83 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||| |||||||||||| |||||| || || |||||| |
|
|
| T |
19255866 |
acatcaagcagaaaagccctacactccactaacatctcctcctcccacgcccacaatctccgcctccac |
19255934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 33640144 - 33640212
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccac |
83 |
Q |
| |
|
|||||||| || ||||||||||||||| |||||| |||||||||||| |||||| || || |||||| |
|
|
| T |
33640144 |
acatcaagcagaaaagccctacactccactaacatctcctcctcccacgcccacaatctccgcctccac |
33640212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418 (Bit Score: 104; Significance: 8e-52; HSPs: 2)
Name: scaffold0418
Description:
Target: scaffold0418; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 15 - 202
Target Start/End: Original strand, 7901 - 8088
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccacaaaaccccccactgctccgaatcaa |
114 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||| |||||||||||||||||||| ||||| ||||||||||| |||| |||| ||||||| |||||| |
|
|
| T |
7901 |
acatcaagaagtaaagccatacactccactaacatctcctcctcccactgccacaatctacgcctccacctccaaaaaaacccctgctgctccaaatcaa |
8000 |
T |
|
| Q |
115 |
cagataacaagtctgccacagacataaacttattctctgttaactcaaacagcctacggaaacggacacaaaaaggaacatcccctaa |
202 |
Q |
| |
|
|||| ||||||||||||| |||||| | |||||||||| |||||||||||| ||||| ||||||||||| || |||||||||||||| |
|
|
| T |
8001 |
cagagaacaagtctgccatagacatgagcttattctctattaactcaaacaatctacgaaaacggacacagaacggaacatcccctaa |
8088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0418; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 8102 - 8149
Alignment:
| Q |
286 |
caccatcactacccctaagacgactcacctccctccaccaacacgaaac |
334 |
Q |
| |
|
||||| ||||| |||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
8102 |
caccaccactatccctaatacgactcacctccc-ccaccaacacgaaac |
8149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0112 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0112
Description:
Target: scaffold0112; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 15564 - 15490
Alignment:
| Q |
15 |
acatcaagaagtaaagccctacactccgctaacaagtcctcctcccactgccacaacctacgtctccacctccac |
89 |
Q |
| |
|
||||||| |||||||||||||||||| |||||| |||||||||||| |||||| || || | |||||||||| |
|
|
| T |
15564 |
acatcaaatagtaaagccctacactcctctaacatatcctcctcccacgcccacaatctgcgacgccacctccac |
15490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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