View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8103_low_30 (Length: 229)
Name: NF8103_low_30
Description: NF8103
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8103_low_30 |
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Alignment Details
Target: chr1 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 49133327 - 49133128
Alignment:
| Q |
11 |
acatcaatgatgaaaattgttcaccaactttggatcaagtaaagtaatggatagacacacagctaaatctggtgaagaacaatgataaaatgttacagaa |
110 |
Q |
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| T |
49133327 |
acatcaatgatgaaaattgttcaccaactttggatcaagtaaagtaatggatagacacacagctaaatctggtgaagaacaatgataaaatgttacagaa |
49133228 |
T |
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| Q |
111 |
catgttctatttcttcgacaggataacatattcttataaatcaagcaattcgaccatcaacattctcaggcatgcctcttccttcatgatgaccaccatc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
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| T |
49133227 |
catgttctatttcttcgacaggataacatattcttataaatcaagcaattcgaccatcaatattctcaggcatgccttttccttcatgatgaccaccatc |
49133128 |
T |
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